Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Reverse (-)

68799623 .. 68802803

Gene Structure 3181 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG482500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGTCTTGGGGTCTCTTGGTTTTGCTGTTGCTGGTGAATTCAGCCCTGGCCAATGGAAGAGGGGACAGATGTCAAAAAACCCAACAACACAGAGTTGCAAGAATAGGAGCTGTAGTTGATTTCACTTCTCGTGTGGGCAAAGAACAGAGAATAGCCATGGATTTGGCTATCCAAGACCTTCTTCACTCGAGCTGCCTTATAGTAAACTTAGACCTCAGAGATTCACAAGGCAATTCAGCTAAATCAACTGCTGCTGTAATCAATCTTCTTAATGTCAAACAAGTTGAAGCCATCATCGGAACACTGACAAAGCAAGAAGCTGCTCTGGTATCCGAGATTGACAATCATAGCCAGAATTTCACCATCATATCACTTCCTTCCACTGCCATAAATCCACCATCAGCCTCACTTCGACTGCCAAATTTTCTCCAAGCAGCAAATGACATTGGTATCCATATGCAATGCTTGGCAGCCTTAGTTGGTCATTTCCAATGGAGAAAGGTGACTGCAATTTATGAACAAAACATTGACTTTTCCTCCAATTCTGGAATGATAACCCTCCTCTCTGATTCACTTAAATTAGTCAACTCAGAGATTGAACACCACCAAGCTTTCCCAACCCTCTCTTCTCTCTCTGATCCGGATGCCTTTTTTGATGAAGAGCTGAAGAAGTTGAGGTGCAAGAGCAACAGAGTTTTCATAGTTACCCAGTTCTCTTTAAATACAGCTGTTTTTCTCTTTGAAAAGGCAAAGGAAATGGGGATGATGGGCAAAGGCTATGTGTGGATTGTCACAGATGAAATTGCAAGCCTTCTTGACTCTGTTGACTCTTCTATCAAGTACGACATGCAAGGTGTGATTGGTATCAAAACCAACTTCATAGAAACAACCCACACTTTCACCAAGTTCAAAACCAGGTTTCGCAGACTGTATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGTCCAAGCATCTTTGCTCTTCGAACATATGACACAATGCACGCCATTGCTCTAGCCATGAAAAATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCGAATTCCAAGGTCTAAGTGGCATGATGGAGTTCAAGAATGGCATGCTATCACAACAACCAACCTTTCAAATCATTAATGTGTTTGGCAGAAGCTACAGCGAGATTGCATTCTGGTCACCAAGCTTCGGTTTCTCAGAGGACATGAACAAACACCTTGATATGAAGGAGAGGACTAATCACAATTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGCTTACAAGCAGCTCCAAAGGGGTGGACTCTTGTTGAAGGAGAGAGACTGTTGAAGATAGGGATTCCGGCGAGGGCTGCCTTCAATCAATTTGTGAAAGTAACATATGACCAGGACAAGAATCAGACACACATCTCAGGGTTTTCAATTGATATGTTTGAAGCAGCTGTCAAAAACCTGCCTTATCAGTTGCCTTATGTGTTTGTTCCCTTCAATGGCTCATATGATGAATTGGTGGAACAGGTCTACTACAAGGGCTTGGATGCAGCTGTTGGTGATATAGAAGTCATAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATATATAAGCTCTGGACTTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTGAAGGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCATGATCACTACGCACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGCGAACATGGGCAAAACTTTGAATTAGAAGGAATTGGGGACATCCTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCAAGGCTGGTGCTGGCTCCATGGTTAGTAGTGATTCTAGTAGTAACAGCCACTTTCACAGCAAGCCTCACTTCCATGATGACCATCTCTCGAGTCCAGCCATCTGTGCTCAATGTGGAAACACTTAAGAAAGAAAATGGAACTGTTGGATGTAATGGAAACTCTTTTATTGTAAGATACCTGATCGATGTTCTAGAGTTCAGACCAGAAAACATCAAGAGAATTTCCTCCGTAAGTGACTACCCAAAGGCCTTCCAGAATGGAGATATTCAAGCAGCTTTCTTCGTCGCCCCCCATGCTAAAGTCTTTCTCGCATGTTACTGCAAGGGCTATATGAAAGCAGGTCCTATATACAAGCCTAGCGGCTTTGCATTTGTTTTTCCAAAGGGATCTCCCCTGGCCATTGACCTGTCAAAGGCAATCCTAGATGTAAACGAGAAGAAGCAAGTGGAGCTATTAGAAAAACAAATGCTCTCCTCCTTTAACTGCTCCCCTTCACTCAACTTGAACGATGGTCCAATAGGTTATGAGCCCTTTTCCGGCCTATTTCTAATTTCAGGTTTGGTTTGTGCATTTGCACTATTGGTTACGAGCGGGCGTATCGCCAGTAGACATCTGCAGAATATGAGCTGCATACGAGCCATACTAATGAAAACAGGAATTCTAACATGGGCTTTTATGTACTTGATTCAGAGCTGCAGAAAATCTCACAAGCATTGCTCCACAACCTCCATACTGGAAACTTGTTCTACAAGGAACATAAGCAGTAGTGGTGATATAGTGATTATCACGCACCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

890

Amino Acids

99.72

Weight (kDa)

7.3

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	34 - 363	5.2e-07	Periplasmic binding protein
ANF_receptor	PF01094	51 - 384	2.6e-40	Receptor family ligand binding region
SBP_bac_3	PF00497	464 - 778	1.1e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	568 - 812	6e-20	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1476, 2204
AccBSI	CCGCTC	1 cut(s)	2466
AccI	GTMKAC	2 cut(s)	1536, 2482
AccIII	TCCGGA	1 cut(s)	640
AciI	CCGC	2 cut(s)	2235, 2466
AclWI	GGATC	2 cut(s)	632, 2269
AcoI	YGGCCR	3 cut(s)	48, 1283, 2271
AcsI	RAATTY	6 cut(s)	37, 355, 421, 1073, 2094, 2532
AcuI	CTGAAG	5 cut(s)	686, 969, 1619, 1681, 1688
AfaI	GTAC	2 cut(s)	842, 2555
AfiI	CCNNNNNNNGG	4 cut(s)	1196, 1505, 2287, 2411
AflII	CTTAAG	1 cut(s)	1997
AgeI	ACCGGT	1 cut(s)	1587
AjnI	CCWGG	5 cut(s)	45, 914, 1285, 1401, 2268
AjuI	GAANNNNNNNTTGG	4 cut(s)	165, 197, 610, 642
Alw21I	GWGCWC	1 cut(s)	1983
Alw26I	GTCTC	3 cut(s)	17, 1056, 1330
AlwI	GGATC	2 cut(s)	632, 2269
Ama87I	CYCGRG	2 cut(s)	187, 1962
Aor13HI	TCCGGA	1 cut(s)	640
AoxI	GGCC	5 cut(s)	48, 1283, 2121, 2271, 2413
ApoI	RAATTY	6 cut(s)	37, 355, 421, 1073, 2094, 2532
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
AseI	ATTAAT	1 cut(s)	1146
AsiGI	ACCGGT	1 cut(s)	1587
Asp700I	GAANNNNTTC	2 cut(s)	1694, 1857
AspS9I	GGNCC	3 cut(s)	1271, 2216, 2387
AsuHPI	GGTGA	8 cut(s)	46, 352, 514, 892, 1179, 1577, 1819, 2657
AsuII	TTCGAA	1 cut(s)	988
AvaI	CYCGRG	2 cut(s)	187, 1962
AvaII	GGWCC	3 cut(s)	1271, 2216, 2387
BaeI	ACNNNNGTAYC	2 cut(s)	433, 466
BalI	TGGCCA	3 cut(s)	50, 1285, 2273
BanII	GRGCYC	1 cut(s)	2406
BarI	GAAGNNNNNNTAC	2 cut(s)	249, 281
BauI	CACGAG	1 cut(s)	129
Bbv12I	GWGCWC	1 cut(s)	1983
BccI	CCATC	9 cut(s)	299, 371, 406, 760, 1090, 1633, 1964, 1981, 2378
BciT130I	CCWGG	5 cut(s)	47, 916, 1287, 1403, 2270
BciVI	GTATCC	2 cut(s)	340, 461
BclI	TGATCA	1 cut(s)	1722
BcoDI	GTCTC	3 cut(s)	17, 1056, 1330
BfaI	CTAG	6 cut(s)	966, 1019, 1910, 2066, 2232, 2297
BfmI	CTRYAG	4 cut(s)	111, 1165, 2489, 2569
BfrI	CTTAAG	1 cut(s)	1997
BfuAI	ACCTGC	2 cut(s)	1476, 2204
BfuI	GTATCC	2 cut(s)	340, 461
Bme1390I	CCNGG	5 cut(s)	47, 916, 1287, 1403, 2270
Bme18I	GGWCC	3 cut(s)	1271, 2216, 2387
BmeT110I	CYCGRG	2 cut(s)	187, 1962
BmgT120I	GGNCC	3 cut(s)	1271, 2216, 2387
BmiI	GGNNCC	2 cut(s)	1272, 1890
BmrFI	CCNGG	5 cut(s)	47, 916, 1287, 1403, 2270
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	3 cut(s)	634, 984, 1543
BmuI	ACTGGG	1 cut(s)	703
BoxI	GACNNNNGTC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	988
BpuEI	CTTGAG	1 cut(s)	1038
Bsa29I	ATCGAT	1 cut(s)	2058
BsaBI	GATNNNNATC	2 cut(s)	863, 1955
BsaI	GGTCTC	1 cut(s)	17
BsaJI	CCNNGG	5 cut(s)	45, 156, 1078, 1892, 2268
BsaWI	WCCGGW	2 cut(s)	640, 1587
BsaXI	ACNNNNNCTCC	4 cut(s)	99, 129, 521, 551
Bsc4I	CCNNNNNNNGG	4 cut(s)	1196, 1505, 2287, 2411
Bse118I	RCCGGY	1 cut(s)	1587
Bse1I	ACTGG	4 cut(s)	709, 1286, 2478, 2613
Bse3DI	GCAATG	3 cut(s)	467, 1011, 2587
Bse8I	GATNNNNATC	2 cut(s)	863, 1955
BseAI	TCCGGA	1 cut(s)	640
BseBI	CCWGG	5 cut(s)	47, 916, 1287, 1403, 2270
BseCI	ATCGAT	1 cut(s)	2058
BseDI	CCNNGG	5 cut(s)	45, 156, 1078, 1892, 2268
BseGI	GGATG	6 cut(s)	649, 768, 1558, 1686, 1809, 2027
BseJI	GATNNNNATC	2 cut(s)	863, 1955
BseLI	CCNNNNNNNGG	4 cut(s)	1196, 1505, 2287, 2411
BseMI	GCAATG	3 cut(s)	467, 1011, 2587
BseMII	CTCAG	4 cut(s)	229, 603, 1218, 1440
BseNI	ACTGG	4 cut(s)	709, 1286, 2478, 2613
BseRI	GAGGAG	2 cut(s)	551, 2338
BshFI	GGCC	5 cut(s)	50, 1285, 2123, 2273, 2415
BshTI	ACCGGT	1 cut(s)	1587
BshVI	ATCGAT	1 cut(s)	2058
BsiHKAI	GWGCWC	1 cut(s)	1983
BsiHKCI	CYCGRG	2 cut(s)	187, 1962
BsiSI	CCGG	4 cut(s)	641, 1358, 1588, 2412
BslFI	GGGAC	2 cut(s)	77, 1820
BslI	CCNNNNNNNGG	4 cut(s)	1196, 1505, 2287, 2411
BsmAI	GTCTC	3 cut(s)	17, 1056, 1330
BsmFI	GGGAC	2 cut(s)	77, 1820
BsmI	GAATGC	3 cut(s)	1178, 1696, 1772
BsnI	GGCC	5 cut(s)	50, 1285, 2123, 2273, 2415
Bso31I	GGTCTC	1 cut(s)	17
BsoBI	CYCGRG	2 cut(s)	187, 1962
Bsp119I	TTCGAA	1 cut(s)	988
Bsp1286I	GDGCHC	2 cut(s)	1983, 2406
Bsp13I	TCCGGA	1 cut(s)	640
Bsp143I	GATC	4 cut(s)	637, 1722, 2055, 2261
Bsp19I	CCATGG	2 cut(s)	156, 1892
BspACI	CCGC	2 cut(s)	2235, 2466
BspANI	GGCC	5 cut(s)	50, 1285, 2123, 2273, 2415
BspCNI	CTCAG	4 cut(s)	228, 602, 1217, 1439
BspDI	ATCGAT	1 cut(s)	2058
BspEI	TCCGGA	1 cut(s)	640
BspHI	TCATGA	2 cut(s)	1686, 1719
BspLI	GGNNCC	2 cut(s)	1272, 1890
BspMAI	CTGCAG	2 cut(s)	2493, 2573
BspMI	ACCTGC	2 cut(s)	1476, 2204
BspPI	GGATC	2 cut(s)	632, 2269
BspQI	GCTCTTC	2 cut(s)	654, 990
BspT104I	TTCGAA	1 cut(s)	988
BspTI	CTTAAG	1 cut(s)	1997
BspTNI	GGTCTC	1 cut(s)	17
BsrBI	CCGCTC	1 cut(s)	2466
BsrDI	GCAATG	3 cut(s)	467, 1011, 2587
BsrFI	RCCGGY	1 cut(s)	1587
BsrI	ACTGG	4 cut(s)	709, 1286, 2478, 2613
BssAI	RCCGGY	1 cut(s)	1587
BssECI	CCNNGG	5 cut(s)	45, 156, 1078, 1892, 2268
BssMI	GATC	4 cut(s)	637, 1722, 2055, 2261
BssSI	CACGAG	1 cut(s)	129
BssT1I	CCWWGG	3 cut(s)	156, 1078, 1892
Bst2BI	CACGAG	1 cut(s)	129
Bst2UI	CCWGG	5 cut(s)	47, 916, 1287, 1403, 2270
Bst4CI	ACNGT	5 cut(s)	930, 1341, 1651, 1831, 2017
Bst6I	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
BstAFI	CTTAAG	1 cut(s)	1997
BstBI	TTCGAA	1 cut(s)	988
BstC8I	GCNNGC	6 cut(s)	808, 1008, 1115, 1887, 1936, 2468
BstDEI	CTNAG	7 cut(s)	208, 215, 475, 589, 1085, 1204, 1426
BstDSI	CCRYGG	2 cut(s)	156, 1892
BstEII	GGTNACC	1 cut(s)	1185
BstENI	CCTNNNNNAGG	1 cut(s)	2285
BstF5I	GGATG	6 cut(s)	649, 768, 1558, 1686, 1809, 2027
BstKTI	GATC	4 cut(s)	640, 1725, 2058, 2264
BstMAI	GTCTC	3 cut(s)	17, 1056, 1330
BstMBI	GATC	4 cut(s)	637, 1722, 2055, 2261
BstMWI	GCNNNNNNNGC	5 cut(s)	1367, 1663, 1978, 2168, 2323
BstNI	CCWGG	5 cut(s)	47, 916, 1287, 1403, 2270
BstNSI	RCATGY	4 cut(s)	850, 1117, 1711, 2190
BstPAI	GACNNNNGTC	1 cut(s)	69
BstPI	GGTNACC	1 cut(s)	1185
BstSCI	CCNGG	5 cut(s)	45, 914, 1285, 1401, 2268
BstSFI	CTRYAG	4 cut(s)	111, 1165, 2489, 2569
BstX2I	RGATCY	1 cut(s)	2261
BstXI	CCANNNNNNTGG	3 cut(s)	163, 1281, 1314
BstYI	RGATCY	1 cut(s)	2261
Bsu15I	ATCGAT	1 cut(s)	2058
BsuI	GTATCC	2 cut(s)	340, 461
BsuRI	GGCC	5 cut(s)	50, 1285, 2123, 2273, 2415
BsuTUI	ATCGAT	1 cut(s)	2058
BtgI	CCRYGG	2 cut(s)	156, 1892
BtsCI	GGATG	6 cut(s)	649, 768, 1558, 1686, 1809, 2027
BtsI	GCAGTG	1 cut(s)	381
BtsIMutI	CAGTG	3 cut(s)	302, 381, 1647
BveI	ACCTGC	2 cut(s)	1476, 2204
Cac8I	GCNNGC	6 cut(s)	808, 1008, 1115, 1887, 1936, 2468
CciI	TCATGA	2 cut(s)	1686, 1719
Cfr10I	RCCGGY	1 cut(s)	1587
Cfr13I	GGNCC	3 cut(s)	1271, 2216, 2387
ClaI	ATCGAT	1 cut(s)	2058
CsiI	ACCWGGT	1 cut(s)	914
Csp6I	GTAC	2 cut(s)	841, 2554
CspAI	ACCGGT	1 cut(s)	1587
CviQI	GTAC	2 cut(s)	841, 2554
DdeI	CTNAG	7 cut(s)	208, 215, 475, 589, 1085, 1204, 1426
DpnI	GATC	4 cut(s)	639, 1724, 2057, 2263
DpnII	GATC	4 cut(s)	637, 1722, 2055, 2261
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	3 cut(s)	48, 1283, 2271
Eam1104I	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
EarI	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
Eco130I	CCWWGG	3 cut(s)	156, 1078, 1892
Eco147I	AGGCCT	1 cut(s)	2123
Eco24I	GRGCYC	1 cut(s)	2406
Eco31I	GGTCTC	1 cut(s)	17
Eco47I	GGWCC	3 cut(s)	1271, 2216, 2387
Eco57I	CTGAAG	5 cut(s)	686, 969, 1619, 1681, 1688
Eco88I	CYCGRG	2 cut(s)	187, 1962
Eco91I	GGTNACC	1 cut(s)	1185
EcoNI	CCTNNNNNAGG	1 cut(s)	2285
EcoO109I	RGGNCCY	1 cut(s)	2216
EcoO65I	GGTNACC	1 cut(s)	1185
EcoRI	GAATTC	3 cut(s)	37, 1073, 2532
EcoRII	CCWGG	5 cut(s)	45, 914, 1285, 1401, 2268
EcoT14I	CCWWGG	3 cut(s)	156, 1078, 1892
EcoT38I	GRGCYC	1 cut(s)	2406
ErhI	CCWWGG	3 cut(s)	156, 1078, 1892
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 1927, 1959
FaqI	GGGAC	2 cut(s)	77, 1820
FauI	CCCGC	1 cut(s)	2459
FauNDI	CATATG	4 cut(s)	456, 994, 1396, 1513
FbaI	TGATCA	1 cut(s)	1722
FblI	GTMKAC	2 cut(s)	1536, 2482
FokI	GGATG	6 cut(s)	656, 775, 1565, 1693, 1796, 2034
FriOI	GRGCYC	1 cut(s)	2406
FspBI	CTAG	6 cut(s)	966, 1019, 1910, 2066, 2232, 2297
HaeIII	GGCC	5 cut(s)	50, 1285, 2123, 2273, 2415
HapII	CCGG	4 cut(s)	641, 1358, 1588, 2412
HincII	GTYRAC	2 cut(s)	586, 826
HindII	GTYRAC	2 cut(s)	586, 826
HindIII	AAGCTT	2 cut(s)	609, 1192
HpaII	CCGG	4 cut(s)	641, 1358, 1588, 2412
HphI	GGTGA	8 cut(s)	46, 352, 514, 892, 1179, 1577, 1819, 2657
Hpy166II	GTNNAC	8 cut(s)	205, 586, 826, 1068, 1317, 1537, 2305, 2483
Hpy8I	GTNNAC	8 cut(s)	205, 586, 826, 1068, 1317, 1537, 2305, 2483
Hpy99I	CGWCG	1 cut(s)	2162
HpyCH4III	ACNGT	5 cut(s)	930, 1341, 1651, 1831, 2017
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1367, 1663, 1978, 2168, 2323
HpyF3I	CTNAG	7 cut(s)	208, 215, 475, 589, 1085, 1204, 1426
Kpn2I	TCCGGA	1 cut(s)	640
Ksp22I	TGATCA	1 cut(s)	1722
Kzo9I	GATC	4 cut(s)	637, 1722, 2055, 2261
LguI	GCTCTTC	2 cut(s)	654, 990
LmnI	GCTCC	6 cut(s)	107, 1309, 1894, 2323, 2366, 2597
LweI	GCATC	3 cut(s)	634, 984, 1543
MabI	ACCWGGT	1 cut(s)	914
MaeI	CTAG	6 cut(s)	966, 1019, 1910, 2066, 2232, 2297
MalI	GATC	4 cut(s)	639, 1724, 2057, 2263
MbiI	CCGCTC	1 cut(s)	2466
MboI	GATC	4 cut(s)	637, 1722, 2055, 2261
MfeI	CAATTG	1 cut(s)	1437
MflI	RGATCY	1 cut(s)	2261
MhlI	GDGCHC	2 cut(s)	1983, 2406
MlsI	TGGCCA	3 cut(s)	50, 1285, 2273
MluNI	TGGCCA	3 cut(s)	50, 1285, 2273
MlyI	GAGTC	4 cut(s)	812, 821, 1312, 1974
MmeI	TCCRAC	1 cut(s)	1999
Mox20I	TGGCCA	3 cut(s)	50, 1285, 2273
MroI	TCCGGA	1 cut(s)	640
MroXI	GAANNNNTTC	2 cut(s)	1694, 1857
MscI	TGGCCA	3 cut(s)	50, 1285, 2273
MseI	TTAA	6 cut(s)	270, 576, 719, 1146, 1998, 2355
MslI	CAYNNNNRTG	4 cut(s)	1148, 1254, 1946, 2519
Msp20I	TGGCCA	3 cut(s)	50, 1285, 2273
MspA1I	CMGCKG	3 cut(s)	728, 1457, 1559
MspCI	CTTAAG	1 cut(s)	1997
MspI	CCGG	4 cut(s)	641, 1358, 1588, 2412
MspR9I	CCNGG	5 cut(s)	47, 916, 1287, 1403, 2270
MunI	CAATTG	1 cut(s)	1437
Mva1269I	GAATGC	3 cut(s)	1178, 1696, 1772
MvaI	CCWGG	5 cut(s)	47, 916, 1287, 1403, 2270
MwoI	GCNNNNNNNGC	5 cut(s)	1367, 1663, 1978, 2168, 2323
NcoI	CCATGG	2 cut(s)	156, 1892
NdeI	CATATG	4 cut(s)	456, 994, 1396, 1513
NdeII	GATC	4 cut(s)	637, 1722, 2055, 2261
NlaIV	GGNNCC	2 cut(s)	1272, 1890
NmuCI	GTSAC	6 cut(s)	502, 790, 1185, 1645, 1825, 2108
NspI	RCATGY	4 cut(s)	850, 1117, 1711, 2190
NspV	TTCGAA	1 cut(s)	988
PaeI	GCATGC	1 cut(s)	1117
PaeR7I	CTCGAG	2 cut(s)	187, 1962
PagI	TCATGA	2 cut(s)	1686, 1719
PceI	AGGCCT	1 cut(s)	2123
PciSI	GCTCTTC	2 cut(s)	654, 990
PctI	GAATGC	3 cut(s)	1178, 1696, 1772
PdmI	GAANNNNTTC	2 cut(s)	1694, 1857
PfeI	GAWTC	6 cut(s)	221, 569, 1354, 1411, 1906, 2560
PinAI	ACCGGT	1 cut(s)	1587
PleI	GAGTC	4 cut(s)	812, 821, 1312, 1973
PpsI	GAGTC	4 cut(s)	812, 821, 1312, 1973
PpuMI	RGGWCCY	1 cut(s)	2216
PshAI	GACNNNNGTC	1 cut(s)	69
PshBI	ATTAAT	1 cut(s)	1146
Psp5II	RGGWCCY	1 cut(s)	2216
Psp6I	CCWGG	5 cut(s)	45, 914, 1285, 1401, 2268
PspEI	GGTNACC	1 cut(s)	1185
PspGI	CCWGG	5 cut(s)	45, 914, 1285, 1401, 2268
PspN4I	GGNNCC	2 cut(s)	1272, 1890
PspPI	GGNCC	3 cut(s)	1271, 2216, 2387
PspPPI	RGGWCCY	1 cut(s)	2216
PspXI	VCTCGAGB	1 cut(s)	187
PstI	CTGCAG	2 cut(s)	2493, 2573
PsuI	RGATCY	1 cut(s)	2261
PvuII	CAGCTG	3 cut(s)	728, 1457, 1559
RsaI	GTAC	2 cut(s)	842, 2555
RsaNI	GTAC	2 cut(s)	841, 2554
RseI	CAYNNNNRTG	4 cut(s)	1148, 1254, 1946, 2519
SapI	GCTCTTC	2 cut(s)	654, 990
SaqAI	TTAA	6 cut(s)	270, 576, 719, 1146, 1998, 2355
Sau3AI	GATC	4 cut(s)	637, 1722, 2055, 2261
Sau96I	GGNCC	3 cut(s)	1271, 2216, 2387
SchI	GAGTC	4 cut(s)	812, 821, 1312, 1974
ScrFI	CCNGG	5 cut(s)	47, 916, 1287, 1403, 2270
SduI	GDGCHC	2 cut(s)	1983, 2406
SexAI	ACCWGGT	1 cut(s)	914
SfaNI	GCATC	3 cut(s)	634, 984, 1543
SfcI	CTRYAG	4 cut(s)	111, 1165, 2489, 2569
Sfr274I	CTCGAG	2 cut(s)	187, 1962
SfuI	TTCGAA	1 cut(s)	988
SinI	GGWCC	3 cut(s)	1271, 2216, 2387
SlaI	CTCGAG	2 cut(s)	187, 1962
SmiMI	CAYNNNNRTG	4 cut(s)	1148, 1254, 1946, 2519
SmlI	CTYRAG	4 cut(s)	187, 1053, 1962, 1997
SmoI	CTYRAG	4 cut(s)	187, 1053, 1962, 1997
SphI	GCATGC	1 cut(s)	1117
SseBI	AGGCCT	1 cut(s)	2123
SsiI	CCGC	2 cut(s)	2235, 2466
SspMI	CTAG	6 cut(s)	966, 1019, 1910, 2066, 2232, 2297
StuI	AGGCCT	1 cut(s)	2123
StyD4I	CCNGG	5 cut(s)	45, 914, 1285, 1401, 2268
StyI	CCWWGG	3 cut(s)	156, 1078, 1892
TaaI	ACNGT	5 cut(s)	930, 1341, 1651, 1831, 2017
TaqI	TCGA	5 cut(s)	188, 412, 988, 1963, 2058
TatI	WGTACW	1 cut(s)	2553
TauI	GCSGC	1 cut(s)	2238
TfiI	GAWTC	6 cut(s)	221, 569, 1354, 1411, 1906, 2560
Tru1I	TTAA	6 cut(s)	270, 576, 719, 1146, 1998, 2355
Tru9I	TTAA	6 cut(s)	270, 576, 719, 1146, 1998, 2355
TscAI	CASTG	3 cut(s)	309, 388, 1654
TseFI	GTSAC	6 cut(s)	502, 790, 1185, 1645, 1825, 2108
Tsp45I	GTSAC	6 cut(s)	502, 790, 1185, 1645, 1825, 2108
TspGWI	ACGGA	1 cut(s)	2092
TspRI	CASTG	3 cut(s)	309, 388, 1654
Vha464I	CTTAAG	1 cut(s)	1997
VpaK11BI	GGWCC	3 cut(s)	1271, 2216, 2387
VspI	ATTAAT	1 cut(s)	1146
XagI	CCTNNNNNAGG	1 cut(s)	2285
XapI	RAATTY	6 cut(s)	37, 355, 421, 1073, 2094, 2532
XbaI	TCTAGA	1 cut(s)	2065
XceI	RCATGY	4 cut(s)	850, 1117, 1711, 2190
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1085
XhoI	CTCGAG	2 cut(s)	187, 1962
XmiI	GTMKAC	2 cut(s)	1536, 2482
XmnI	GAANNNNTTC	2 cut(s)	1694, 1857
XspI	CTAG	6 cut(s)	966, 1019, 1910, 2066, 2232, 2297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.