Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Reverse (-)

64906490 .. 64909625

Gene Structure 3136 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGTCTTGGGGTACCTTGGTTTTGCTGCTGCTGGTGAATTCAGCCCTGGCCAATGGAAGAGGGGACAGATGTCAAAAAACCCAACAACAGAGAGTTGCAAGAATGGGAGCTGTAGTTGATTTCACCTCTCGTGTGGGAAAAGAACAGAGAATAGCTATGGATTTGGCTATCCAAGACCTTCTTCACTCGAACTGCCTTGCAGTAAATTTAGACCTCAGAGATTCACAGGGAAGTACGGCTAAATCAACTGCTGCTGCAATCAATCTTCTGAATGGCAAACAAGTTGAAGCCATCATTGGAACACTGACAATGCAAGAAGCAGCTCTTGTCTCTGAGATTGATAATCAAACCGCAAACTTCACCATTTTATCACTTGCTTCACCTGCCATAAACCCACCATCAGCCTCACTTCAAATGCCAAATTTTCTCCAAGTTGCAAATGACATTGCTATCCATATGCAATGCTTGGCAGCCTTAGTTGGTCATTTTCAATGGAGAAAGGTGACTGCAATTTCTGAACAAAAGAGTGATCTTTCCTACAATTCTGGAATGATAACCCTCCTCTCCGATTCACTTAAATTAGTCAACTCAGAGATTGAGCACCACCAAGCTTTCCCAACCCTCTCTTCTCTCTCTGATCCAGATTCCTTTTTCGATGAAGAGCTGAAGAAGTTGAGGAACAAAAGCAACAGGGTTTTCATACTTACCCAGTTCTCTTTAAATTCAGCTGTTTTTCTCTTTGGAAAGGCAAAGGAAACGGGGATGATGGGCAAAGGCTATGTATGGATTGTCACAGATGAGATTGCAAGTCTTCTTGACTCTGTTGATTCTTCTATCAAGTACAATATGCAAGGTGTTATTGGTATTAAAACCAACTTCATAGAAATAAGTACAACCAACAATTTCGCGAAATTCAAAACCAGATTTCGCAGACTATATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGCCCTAGCATCTTTGCACTTCGAACGTATGACGCAATGCAGGCCATGGCTCTAGCCATGAAATATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCAAATTCCAAGATCTAAGTGGCATGATGGAGTTCAAGAATGGCATGCTGTCACAACAACCAACCTTTCAAATCATTAATGTGTTTGGCAGAAGCTACAGCGAGATTGCATTCTGGTCACCAAGCTTCGGTTTCTCAGACAACATGAACAAACACCTTGATATGAAGGAGAGGACTAATCACAATTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGCTTACAAGCAGCTCCAAAGGGGTGGACTCTTGTCGATGGAGAGAGACCGTTGAAGATAGGGATTCCGGCGAGGGGTGCCTTCAATCAATTTGTGAAAGTAACGTATGACCAGGACAAGAATCAGACACACATCTCAGGGTTTTCAATTGATATGTTTGAAGCAGCTGTGAAAAACCTGCCTTATCACTTGCCTCATGTGTTTGTTCCCTTCAATGGCTCATATGATGAATTGGTGGAACAGGTCTACTACAAGGGTTTGGATGCAGCTGTTGGTGATATAGAAGTCATAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATATATAAGCTCTGGACTTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTGAAGGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCTTGATCACTACACACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGTGAACATGGGCAAAACTTTGAATTAGAGGGTATTGGGGCCATCCTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCTCGGCTGGTGCTGGCTCCATGGTTAGTAGTGATTCTAGTAGTAACAGCCACTTTCACAGCGAGCCTCACTTCCATGATGACCATCTCTCGAGTCCAGCCATCTGTGCTCAATGTGGAAACACTTAAGAAAGAAAATGGAACTGTTGGATGTAATGGCAACTCTTTTATTATTAGGTACCTGATCAATGTTCTAGCGTTCAGACCAGAAAACATCAAGAGAATTTCCTCCATAAGTGACTACCCAAAGGCCTTCCAGAATGGAGATATTCAAGCAGCTTTCTTTGTCGCCCCCCATGCTAAAGTCTTCCTGGCATGTTACTGCAAGGGCTATATGAAGACAGGTCCTATATACAAGCCTAGCGGCTTTGCATTTGCTTTTCCAAAGGGGTCTCCTCTGGCCATTGAAATGTCAAAGGCAATCCTACATGTAAATGAGAAGAAGCAAGTAGAGCTATTAGAAAAACAAATGCTCTCCTCCTTTAACTGCTCCCCTGCACTGAACTTGAAAGATGGTCCAATTGGTTATGAGCCCTTTTCCGGCCTATTTCTAATTTCAGGTTTGGTTTGTGCATTTGCCCTATTGGTCACAAGTGGGCGTATGGCCGGTAGACATCTGCAGAATATGAGCAGCATACTAGCAATACTGACGAAAAAAGGAATTCTAAGATGGGCTTTTATGTACTTGATTCAGAGCTGCAGAAAATCTCAAAAGCATTGCTCCACAACCTCCATCCTGGAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

874

Amino Acids

97.63

Weight (kDa)

8.73

Isoelectric Point (pI)

37.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	44 - 367	5.8e-09	Periplasmic binding protein
ANF_receptor	PF01094	51 - 386	9.2e-39	Receptor family ligand binding region
SBP_bac_3	PF00497	466 - 780	4.1e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	570 - 814	8.4e-19	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	391
Acc36I	ACCTGC	2 cut(s)	391, 1482
Acc65I	GGTACC	2 cut(s)	11, 2055
AccB1I	GGYRCC	3 cut(s)	11, 1373, 2055
AccB7I	CCANNNNNTGG	1 cut(s)	1821
AccI	GTMKAC	2 cut(s)	1542, 2488
AccII	CGCG	1 cut(s)	908
AciI	CCGC	2 cut(s)	351, 2241
AclWI	GGATC	1 cut(s)	632
AcoI	YGGCCR	4 cut(s)	48, 1289, 2277, 2481
AcsI	RAATTY	8 cut(s)	37, 205, 421, 721, 911, 1079, 2100, 2538
AcuI	CTGAAG	5 cut(s)	686, 975, 1625, 1687, 1694
AfaI	GTAC	6 cut(s)	13, 235, 842, 892, 2057, 2561
AfiI	CCNNNNNNNGG	5 cut(s)	1202, 1370, 1511, 1821, 2417
AflII	CTTAAG	1 cut(s)	2003
AflIII	ACRYGT	1 cut(s)	2305
AgeI	ACCGGT	1 cut(s)	1593
AjnI	CCWGG	5 cut(s)	45, 1291, 1407, 2187, 2613
AjuI	GAANNNNNNNTTGG	6 cut(s)	165, 197, 279, 311, 610, 642
Alw21I	GWGCWC	2 cut(s)	603, 1989
Alw26I	GTCTC	4 cut(s)	334, 1062, 1336, 2274
AlwI	GGATC	1 cut(s)	632
Ama87I	CYCGRG	1 cut(s)	1968
AoxI	GGCC	8 cut(s)	48, 1014, 1289, 1812, 2127, 2277, 2419, 2481
ApoI	RAATTY	8 cut(s)	37, 205, 421, 721, 911, 1079, 2100, 2538
ArsI	GACNNNNNNTTYG	2 cut(s)	1040, 1072
AseI	ATTAAT	1 cut(s)	1152
AsiGI	ACCGGT	1 cut(s)	1593
Asp700I	GAANNNNTTC	2 cut(s)	1700, 1863
Asp718I	GGTACC	2 cut(s)	11, 2055
AspS9I	GGNCC	4 cut(s)	1277, 1812, 2222, 2393
AsuHPI	GGTGA	8 cut(s)	46, 115, 352, 372, 514, 1185, 1583, 1825
AsuII	TTCGAA	1 cut(s)	994
AvaI	CYCGRG	1 cut(s)	1968
AvaII	GGWCC	3 cut(s)	1277, 2222, 2393
BaeI	ACNNNNGTAYC	1 cut(s)	36
BalI	TGGCCA	3 cut(s)	50, 1291, 2279
BanI	GGYRCC	3 cut(s)	11, 1373, 2055
BanII	GRGCYC	2 cut(s)	1882, 2412
BauI	CACGAG	1 cut(s)	129
BbsI	GAAGAC	3 cut(s)	803, 2176, 2222
Bbv12I	GWGCWC	2 cut(s)	603, 1989
BceAI	ACGGC	1 cut(s)	252
BciT130I	CCWGG	5 cut(s)	47, 1293, 1409, 2189, 2615
BclI	TGATCA	2 cut(s)	1728, 2061
BcoDI	GTCTC	4 cut(s)	334, 1062, 1336, 2274
BfaI	CTAG	7 cut(s)	972, 978, 1025, 1916, 2072, 2238, 2516
BfmI	CTRYAG	4 cut(s)	111, 1171, 2495, 2575
BfrI	CTTAAG	1 cut(s)	2003
BfuAI	ACCTGC	2 cut(s)	391, 1482
BglII	AGATCT	1 cut(s)	1087
Bme1390I	CCNGG	5 cut(s)	47, 1293, 1409, 2189, 2615
Bme18I	GGWCC	3 cut(s)	1277, 2222, 2393
BmeT110I	CYCGRG	1 cut(s)	1968
BmgT120I	GGNCC	4 cut(s)	1277, 1812, 2222, 2393
BmiI	GGNNCC	6 cut(s)	13, 1278, 1375, 1813, 1896, 2057
BmrFI	CCNGG	5 cut(s)	47, 1293, 1409, 2189, 2615
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	2 cut(s)	990, 1549
BmuI	ACTGGG	1 cut(s)	703
BoxI	GACNNNNGTC	2 cut(s)	69, 1328
BpiI	GAAGAC	3 cut(s)	803, 2176, 2222
Bpu14I	TTCGAA	1 cut(s)	994
BpuEI	CTTGAG	1 cut(s)	1044
BsaBI	GATNNNNATC	1 cut(s)	1961
BsaI	GGTCTC	2 cut(s)	1336, 2274
BsaJI	CCNNGG	4 cut(s)	15, 45, 1017, 1898
BsaWI	WCCGGW	1 cut(s)	1593
BsaXI	ACNNNNNCTCC	2 cut(s)	99, 129
Bsc4I	CCNNNNNNNGG	5 cut(s)	1202, 1370, 1511, 1821, 2417
Bse118I	RCCGGY	2 cut(s)	1593, 2483
Bse1I	ACTGG	2 cut(s)	709, 1292
Bse3DI	GCAATG	4 cut(s)	444, 467, 1014, 2593
Bse8I	GATNNNNATC	1 cut(s)	1961
BseBI	CCWGG	5 cut(s)	47, 1293, 1409, 2189, 2615
BseDI	CCNNGG	4 cut(s)	15, 45, 1017, 1898
BseGI	GGATG	6 cut(s)	768, 1564, 1692, 1815, 2033, 2610
BseJI	GATNNNNATC	1 cut(s)	1961
BseLI	CCNNNNNNNGG	5 cut(s)	1202, 1370, 1511, 1821, 2417
BseMI	GCAATG	4 cut(s)	444, 467, 1014, 2593
BseMII	CTCAG	5 cut(s)	229, 324, 603, 1224, 1446
BseNI	ACTGG	2 cut(s)	709, 1292
BseRI	GAGGAG	3 cut(s)	551, 2262, 2344
BsgI	GTGCAG	1 cut(s)	2358
Bsh1236I	CGCG	1 cut(s)	908
BshFI	GGCC	8 cut(s)	50, 1016, 1291, 1814, 2129, 2279, 2421, 2483
BshNI	GGYRCC	3 cut(s)	11, 1373, 2055
BshTI	ACCGGT	1 cut(s)	1593
BsiHKAI	GWGCWC	2 cut(s)	603, 1989
BsiHKCI	CYCGRG	1 cut(s)	1968
BsiSI	CCGG	4 cut(s)	1364, 1594, 2418, 2484
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	5 cut(s)	1202, 1370, 1511, 1821, 2417
BsmAI	GTCTC	4 cut(s)	334, 1062, 1336, 2274
BsmFI	GGGAC	1 cut(s)	77
BsmI	GAATGC	2 cut(s)	1184, 1702
BsnI	GGCC	8 cut(s)	50, 1016, 1291, 1814, 2129, 2279, 2421, 2483
Bso31I	GGTCTC	2 cut(s)	1336, 2274
BsoBI	CYCGRG	1 cut(s)	1968
Bsp119I	TTCGAA	1 cut(s)	994
Bsp1286I	GDGCHC	4 cut(s)	603, 1882, 1989, 2412
Bsp143I	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
Bsp19I	CCATGG	2 cut(s)	1017, 1898
Bsp68I	TCGCGA	1 cut(s)	908
BspACI	CCGC	2 cut(s)	351, 2241
BspANI	GGCC	8 cut(s)	50, 1016, 1291, 1814, 2129, 2279, 2421, 2483
BspCNI	CTCAG	5 cut(s)	228, 325, 602, 1223, 1445
BspFNI	CGCG	1 cut(s)	908
BspHI	TCATGA	1 cut(s)	1692
BspLI	GGNNCC	6 cut(s)	13, 1278, 1375, 1813, 1896, 2057
BspMAI	CTGCAG	2 cut(s)	2499, 2579
BspMI	ACCTGC	2 cut(s)	391, 1482
BspPI	GGATC	1 cut(s)	632
BspQI	GCTCTTC	1 cut(s)	654
BspT104I	TTCGAA	1 cut(s)	994
BspT107I	GGYRCC	3 cut(s)	11, 1373, 2055
BspTI	CTTAAG	1 cut(s)	2003
BspTNI	GGTCTC	2 cut(s)	1336, 2274
BsrDI	GCAATG	4 cut(s)	444, 467, 1014, 2593
BsrFI	RCCGGY	2 cut(s)	1593, 2483
BsrI	ACTGG	2 cut(s)	709, 1292
BssAI	RCCGGY	2 cut(s)	1593, 2483
BssECI	CCNNGG	4 cut(s)	15, 45, 1017, 1898
BssMI	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
BssSI	CACGAG	1 cut(s)	129
BssT1I	CCWWGG	3 cut(s)	15, 1017, 1898
Bst2BI	CACGAG	1 cut(s)	129
Bst2UI	CCWGG	5 cut(s)	47, 1293, 1409, 2189, 2615
Bst4CI	ACNGT	4 cut(s)	1347, 1657, 1837, 2023
Bst6I	CTCTTC	3 cut(s)	52, 631, 654
BstAFI	CTTAAG	1 cut(s)	2003
BstBI	TTCGAA	1 cut(s)	994
BstC8I	GCNNGC	4 cut(s)	1014, 1121, 1893, 1942
BstDEI	CTNAG	8 cut(s)	215, 333, 475, 589, 1091, 1210, 1432, 2543
BstDSI	CCRYGG	2 cut(s)	1017, 1898
BstEII	GGTNACC	1 cut(s)	1191
BstF5I	GGATG	6 cut(s)	768, 1564, 1692, 1815, 2033, 2610
BstFNI	CGCG	1 cut(s)	908
BstKTI	GATC	5 cut(s)	532, 640, 1090, 1731, 2064
BstMAI	GTCTC	4 cut(s)	334, 1062, 1336, 2274
BstMBI	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
BstMWI	GCNNNNNNNGC	7 cut(s)	383, 1013, 1373, 1669, 1984, 2174, 2329
BstNI	CCWGG	5 cut(s)	47, 1293, 1409, 2189, 2615
BstNSI	RCATGY	4 cut(s)	1123, 1717, 2196, 2309
BstPAI	GACNNNNGTC	2 cut(s)	69, 1328
BstPI	GGTNACC	1 cut(s)	1191
BstSCI	CCNGG	5 cut(s)	45, 1291, 1407, 2187, 2613
BstSFI	CTRYAG	4 cut(s)	111, 1171, 2495, 2575
BstUI	CGCG	1 cut(s)	908
BstV2I	GAAGAC	3 cut(s)	803, 2176, 2222
BstX2I	RGATCY	1 cut(s)	1087
BstXI	CCANNNNNNTGG	2 cut(s)	1287, 1320
BstYI	RGATCY	1 cut(s)	1087
BsuRI	GGCC	8 cut(s)	50, 1016, 1291, 1814, 2129, 2279, 2421, 2483
BtgI	CCRYGG	2 cut(s)	1017, 1898
BtsCI	GGATG	6 cut(s)	768, 1564, 1692, 1815, 2033, 2610
BtsIMutI	CAGTG	3 cut(s)	302, 1653, 2375
BtuMI	TCGCGA	1 cut(s)	908
BveI	ACCTGC	2 cut(s)	391, 1482
Cac8I	GCNNGC	4 cut(s)	1014, 1121, 1893, 1942
CciI	TCATGA	1 cut(s)	1692
Cfr10I	RCCGGY	2 cut(s)	1593, 2483
Cfr13I	GGNCC	4 cut(s)	1277, 1812, 2222, 2393
CseI	GACGC	1 cut(s)	1013
Csp6I	GTAC	6 cut(s)	12, 234, 841, 891, 2056, 2560
CspAI	ACCGGT	1 cut(s)	1593
CviQI	GTAC	6 cut(s)	12, 234, 841, 891, 2056, 2560
DdeI	CTNAG	8 cut(s)	215, 333, 475, 589, 1091, 1210, 1432, 2543
DpnI	GATC	5 cut(s)	531, 639, 1089, 1730, 2063
DpnII	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	4 cut(s)	48, 1289, 2277, 2481
Eam1104I	CTCTTC	3 cut(s)	52, 631, 654
EarI	CTCTTC	3 cut(s)	52, 631, 654
Eco130I	CCWWGG	3 cut(s)	15, 1017, 1898
Eco147I	AGGCCT	1 cut(s)	2129
Eco24I	GRGCYC	2 cut(s)	1882, 2412
Eco31I	GGTCTC	2 cut(s)	1336, 2274
Eco47I	GGWCC	3 cut(s)	1277, 2222, 2393
Eco57I	CTGAAG	5 cut(s)	686, 975, 1625, 1687, 1694
Eco88I	CYCGRG	1 cut(s)	1968
Eco91I	GGTNACC	1 cut(s)	1191
EcoO109I	RGGNCCY	1 cut(s)	2222
EcoO65I	GGTNACC	1 cut(s)	1191
EcoRI	GAATTC	2 cut(s)	37, 2538
EcoRII	CCWGG	5 cut(s)	45, 1291, 1407, 2187, 2613
EcoT14I	CCWWGG	3 cut(s)	15, 1017, 1898
EcoT38I	GRGCYC	2 cut(s)	1882, 2412
ErhI	CCWWGG	3 cut(s)	15, 1017, 1898
FalI	AAGNNNNNCTT	6 cut(s)	165, 197, 309, 341, 2536, 2568
FaqI	GGGAC	1 cut(s)	77
FauNDI	CATATG	2 cut(s)	456, 1519
FbaI	TGATCA	2 cut(s)	1728, 2061
FblI	GTMKAC	2 cut(s)	1542, 2488
FokI	GGATG	6 cut(s)	775, 1571, 1699, 1802, 2040, 2597
FriOI	GRGCYC	2 cut(s)	1882, 2412
FspBI	CTAG	7 cut(s)	972, 978, 1025, 1916, 2072, 2238, 2516
HaeIII	GGCC	8 cut(s)	50, 1016, 1291, 1814, 2129, 2279, 2421, 2483
HapII	CCGG	4 cut(s)	1364, 1594, 2418, 2484
HgaI	GACGC	1 cut(s)	1013
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HindIII	AAGCTT	2 cut(s)	609, 1198
HpaII	CCGG	4 cut(s)	1364, 1594, 2418, 2484
HphI	GGTGA	8 cut(s)	46, 115, 352, 372, 514, 1185, 1583, 1825
Hpy166II	GTNNAC	6 cut(s)	586, 1074, 1323, 1543, 1778, 2489
Hpy8I	GTNNAC	6 cut(s)	586, 1074, 1323, 1543, 1778, 2489
HpyAV	CCTTC	7 cut(s)	188, 1234, 1387, 1516, 1669, 1711, 2140
HpyCH4III	ACNGT	4 cut(s)	1347, 1657, 1837, 2023
HpyCH4IV	ACGT	2 cut(s)	998, 1400
HpyF10VI	GCNNNNNNNGC	7 cut(s)	383, 1013, 1373, 1669, 1984, 2174, 2329
HpyF3I	CTNAG	8 cut(s)	215, 333, 475, 589, 1091, 1210, 1432, 2543
HpySE526I	ACGT	2 cut(s)	998, 1400
KpnI	GGTACC	2 cut(s)	15, 2059
Ksp22I	TGATCA	2 cut(s)	1728, 2061
Kzo9I	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
LguI	GCTCTTC	1 cut(s)	654
LmnI	GCTCC	5 cut(s)	107, 1315, 1900, 2372, 2603
LweI	GCATC	2 cut(s)	990, 1549
MaeI	CTAG	7 cut(s)	972, 978, 1025, 1916, 2072, 2238, 2516
MaeII	ACGT	2 cut(s)	998, 1400
MalI	GATC	5 cut(s)	531, 639, 1089, 1730, 2063
MboI	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
MfeI	CAATTG	2 cut(s)	1443, 2397
MflI	RGATCY	1 cut(s)	1087
MhlI	GDGCHC	4 cut(s)	603, 1882, 1989, 2412
MlsI	TGGCCA	3 cut(s)	50, 1291, 2279
MluNI	TGGCCA	3 cut(s)	50, 1291, 2279
MlyI	GAGTC	3 cut(s)	812, 1318, 1980
MmeI	TCCRAC	1 cut(s)	2005
Mox20I	TGGCCA	3 cut(s)	50, 1291, 2279
MroXI	GAANNNNTTC	2 cut(s)	1700, 1863
MscI	TGGCCA	3 cut(s)	50, 1291, 2279
MseI	TTAA	6 cut(s)	576, 719, 867, 1152, 2004, 2361
MslI	CAYNNNNRTG	5 cut(s)	1154, 1260, 1952, 2285, 2310
Msp20I	TGGCCA	3 cut(s)	50, 1291, 2279
MspA1I	CMGCKG	3 cut(s)	728, 1463, 1565
MspCI	CTTAAG	1 cut(s)	2003
MspI	CCGG	4 cut(s)	1364, 1594, 2418, 2484
MspR9I	CCNGG	5 cut(s)	47, 1293, 1409, 2189, 2615
MunI	CAATTG	2 cut(s)	1443, 2397
Mva1269I	GAATGC	2 cut(s)	1184, 1702
MvaI	CCWGG	5 cut(s)	47, 1293, 1409, 2189, 2615
MvnI	CGCG	1 cut(s)	908
MwoI	GCNNNNNNNGC	7 cut(s)	383, 1013, 1373, 1669, 1984, 2174, 2329
NcoI	CCATGG	2 cut(s)	1017, 1898
NdeI	CATATG	2 cut(s)	456, 1519
NdeII	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
NlaIV	GGNNCC	6 cut(s)	13, 1278, 1375, 1813, 1896, 2057
NmeAIII	GCCGAG	1 cut(s)	1861
NmuCI	GTSAC	8 cut(s)	502, 790, 1125, 1191, 1651, 1831, 2114, 2464
NruI	TCGCGA	1 cut(s)	908
NspI	RCATGY	4 cut(s)	1123, 1717, 2196, 2309
NspV	TTCGAA	1 cut(s)	994
PaeI	GCATGC	1 cut(s)	1123
PaeR7I	CTCGAG	1 cut(s)	1968
PagI	TCATGA	1 cut(s)	1692
PaqCI	CACCTGC	1 cut(s)	391
PceI	AGGCCT	1 cut(s)	2129
PciI	ACATGT	1 cut(s)	2305
PciSI	GCTCTTC	1 cut(s)	654
PctI	GAATGC	2 cut(s)	1184, 1702
PdmI	GAANNNNTTC	2 cut(s)	1700, 1863
PfeI	GAWTC	8 cut(s)	221, 569, 644, 827, 1360, 1417, 1912, 2566
PflMI	CCANNNNNTGG	1 cut(s)	1821
PfoI	TCCNGGA	1 cut(s)	2613
PinAI	ACCGGT	1 cut(s)	1593
PleI	GAGTC	3 cut(s)	812, 1318, 1979
PpsI	GAGTC	3 cut(s)	812, 1318, 1979
PpuMI	RGGWCCY	1 cut(s)	2222
PscI	ACATGT	1 cut(s)	2305
PshAI	GACNNNNGTC	2 cut(s)	69, 1328
PshBI	ATTAAT	1 cut(s)	1152
Psp5II	RGGWCCY	1 cut(s)	2222
Psp6I	CCWGG	5 cut(s)	45, 1291, 1407, 2187, 2613
PspEI	GGTNACC	1 cut(s)	1191
PspGI	CCWGG	5 cut(s)	45, 1291, 1407, 2187, 2613
PspN4I	GGNNCC	6 cut(s)	13, 1278, 1375, 1813, 1896, 2057
PspPI	GGNCC	4 cut(s)	1277, 1812, 2222, 2393
PspPPI	RGGWCCY	1 cut(s)	2222
PstI	CTGCAG	2 cut(s)	2499, 2579
PsuI	RGATCY	1 cut(s)	1087
PvuII	CAGCTG	3 cut(s)	728, 1463, 1565
RruI	TCGCGA	1 cut(s)	908
RsaI	GTAC	6 cut(s)	13, 235, 842, 892, 2057, 2561
RsaNI	GTAC	6 cut(s)	12, 234, 841, 891, 2056, 2560
RseI	CAYNNNNRTG	5 cut(s)	1154, 1260, 1952, 2285, 2310
SapI	GCTCTTC	1 cut(s)	654
SaqAI	TTAA	6 cut(s)	576, 719, 867, 1152, 2004, 2361
Sau3AI	GATC	5 cut(s)	529, 637, 1087, 1728, 2061
Sau96I	GGNCC	4 cut(s)	1277, 1812, 2222, 2393
SchI	GAGTC	3 cut(s)	812, 1318, 1980
ScrFI	CCNGG	5 cut(s)	47, 1293, 1409, 2189, 2615
SduI	GDGCHC	4 cut(s)	603, 1882, 1989, 2412
SfaNI	GCATC	2 cut(s)	990, 1549
SfcI	CTRYAG	4 cut(s)	111, 1171, 2495, 2575
Sfr274I	CTCGAG	1 cut(s)	1968
SfuI	TTCGAA	1 cut(s)	994
SinI	GGWCC	3 cut(s)	1277, 2222, 2393
SlaI	CTCGAG	1 cut(s)	1968
SmiMI	CAYNNNNRTG	5 cut(s)	1154, 1260, 1952, 2285, 2310
SmlI	CTYRAG	3 cut(s)	1059, 1968, 2003
SmoI	CTYRAG	3 cut(s)	1059, 1968, 2003
SphI	GCATGC	1 cut(s)	1123
SseBI	AGGCCT	1 cut(s)	2129
SsiI	CCGC	2 cut(s)	351, 2241
SspMI	CTAG	7 cut(s)	972, 978, 1025, 1916, 2072, 2238, 2516
StuI	AGGCCT	1 cut(s)	2129
StyD4I	CCNGG	5 cut(s)	45, 1291, 1407, 2187, 2613
StyI	CCWWGG	3 cut(s)	15, 1017, 1898
TaaI	ACNGT	4 cut(s)	1347, 1657, 1837, 2023
TaiI	ACGT	2 cut(s)	1001, 1403
TaqI	TCGA	5 cut(s)	188, 654, 994, 1332, 1969
TatI	WGTACW	3 cut(s)	840, 890, 2559
TauI	GCSGC	1 cut(s)	2244
TfiI	GAWTC	8 cut(s)	221, 569, 644, 827, 1360, 1417, 1912, 2566
Tru1I	TTAA	6 cut(s)	576, 719, 867, 1152, 2004, 2361
Tru9I	TTAA	6 cut(s)	576, 719, 867, 1152, 2004, 2361
TscAI	CASTG	3 cut(s)	309, 1660, 2382
TseFI	GTSAC	8 cut(s)	502, 790, 1125, 1191, 1651, 1831, 2114, 2464
Tsp45I	GTSAC	8 cut(s)	502, 790, 1125, 1191, 1651, 1831, 2114, 2464
TspRI	CASTG	3 cut(s)	309, 1660, 2382
Van91I	CCANNNNNTGG	1 cut(s)	1821
Vha464I	CTTAAG	1 cut(s)	2003
VpaK11BI	GGWCC	3 cut(s)	1277, 2222, 2393
VspI	ATTAAT	1 cut(s)	1152
XapI	RAATTY	8 cut(s)	37, 205, 421, 721, 911, 1079, 2100, 2538
XceI	RCATGY	4 cut(s)	1123, 1717, 2196, 2309
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1091
XhoI	CTCGAG	1 cut(s)	1968
XmiI	GTMKAC	2 cut(s)	1542, 2488
XmnI	GAANNNNTTC	2 cut(s)	1700, 1863
XspI	CTAG	7 cut(s)	972, 978, 1025, 1916, 2072, 2238, 2516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.