Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Forward (+)

3614413 .. 3617553

Gene Structure 3141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00160680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGTCTTGGGGTATCTTGGTTTTGCTGCTGCTGGTGAATTCAGCCCTGGCCAATGGAAGAGGGGACAGATGTCAAAAAACCCAACAACAGAGAGTTGCAAGAATGGGAGCTGTAGTTGATTTCACCTCTCGTGTGGGAAAAGAACAGAGAATAGCTATGGATTTGGCTATCCAAGACCTTCTTCACTCGAACTGCCTTACAGTAAATTTAGACCTCAGAGATTCACAGGGAAGTACAGCTAAATCAACTGCTGCTGCAATCAATATTCTGAATGGAAAACAAGTTGAAGCCATCATTGGAACACTGACAATGCAAGAAGCAGCTCTTGTCTCTGAGATTGATAATCAAACCGCAAACTTCACCATTTTATCACTTGCTTCACCTGCCATAAACCCACCATCAGCCTCACTTCAAATGCCAAATTTTCTCCAATTAGCAAATGACATTGCTATCCATATGCAATGCTTGGCAGCCTTAGTCGGTCATTTTCAATGGACAAAGGTGACTGCAATTTATGAACAAAAGAGTGATTTTTCCTACAATTCTGGAATGATAACTCTCCTCTCCGATTCACTTAAATTAGTCAACTCAGAGATTGAGCACCACCAAGCTTTCCCAACCCTCTCTTCTCTCTCTGATCCAGATTCCTTTTTCGATGAAGAGCTGAAGAAGTTGAGGAACAAAAGCAGCAGGGTTTTCATACTTACCCAGTTCTCTTTAAATTCAGCAGTTTTTCTCTTTGGAAAGGCAAAGGAAACGGGGATGATGGGCAAAGGCTATGTGTGGATTGTCACAGATGAAATTGCAAGCCTTCTTGACTCTGTTGACTCTTCTATCAAGTACAACATGCAAGGTGTGATTGGTATCAAAACCAACTTCATCGAAACAACCCACAATTTCACCAAGTTCAAAACCAGGTTCCGCAGACTGTATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGCCCTAGCATCTTTGCTCTTCGAACGTATGACGCAATGCAGGCCATGGCTCTAGCCATGAAATATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCAAATTCCAAGGTCTAAGTGGCACGATGGAGTTCAAGAATGGCATGTTATCACAACAACCAACCTTTCAAATCATTAATGTGTTCGGCAGAAGCTACAGCGAGATTGCGTTCTGGTCAACACGCTTTGGTTTCTCAGAGGACATGAACGTTGATATGAAGGAGAGGACTAATCACAATTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGCTTACAAGCAGCTCCAAAGGGGTGGACTCTTGTCGATGGAGAGAGACCGTTGAAGATAGGGATTCCAGCGAGGGGTGCCTTCAATCAATTTGTGAAAGTAACGTATGACCAGGACAAGAATCAGACACACATCTCAGGGTTTTCAATTGATATCTTTGAAGCAGCTGTGAAAAACCTGCCTTATCAGTTGCCTTATGTGTTTGTTCCCTTCAATGGCTCATATGATGAATTGGTGGAACAGGTCTACTACAAGGGTTTGGATGCAGCTGTTGGTGATATAGAAGTCGTAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATATATAAGCTCTGGAATTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTGAAGGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCATGATCACTACGCACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGCGAACATGGGCAAAACTTTGAATTAGAAGGAATTGGGGCCATCTTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCTCGGCTGGTGCTGGCTCCATGGTACCTGATCAATGTTCTAGCGTTCAGACCAGAAAACATCAAGAGAATTGCCTCCATAAGTGACTACCCAAAGGCCTTCCAGAATGGAGATATTCAAGCAGCTTTCTTCGTCGCCCCCCATGCTAAAGTCTTCCTGGCATGTTACTGCAAGGGCTATATGAACACAGGTCCTATATACAAGCCTAGCGGCTTTGCATTTGCTTTTCCAAAGGGGTCTCCTCTGCCCATTGAAATGTCGAAGGCAATCCTACATGTAAATGAGAAGAAGCAAGTACAGCTATTAGAAAAACAAATGCTCTCCTCCTTTAACTGCTCCCCTGCATTGAACTTAAAAGATGGTCCAATTGGTTATGAGCCCTTTTCCGGCCTATTTCTAATTTCAGGTTTGGTTTGTGCATTTGCCCTATTGGTTACGAGTGGGCAGCTGCAGAAAATCTCAAAAGCATTGCTCCTCAACCTCCATCCTGGAAGCTTGATCTACAAGCAGGAACATGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

796

Amino Acids

89.23

Weight (kDa)

7.24

Isoelectric Point (pI)

35.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	42 - 367	3.7e-09	Periplasmic binding protein
ANF_receptor	PF01094	51 - 384	1.9e-41	Receptor family ligand binding region
SBP_bac_3	PF00497	462 - 724	6.1e-09	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	465 - 548	5.6e-06	Ligated ion channel L-glutamate- and glycine-binding site

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	391
Acc36I	ACCTGC	2 cut(s)	391, 1470
Acc65I	GGTACC	1 cut(s)	1890
AccB1I	GGYRCC	2 cut(s)	1361, 1890
AccB7I	CCANNNNNTGG	1 cut(s)	1809
AccI	GTMKAC	1 cut(s)	1530
AciI	CCGC	3 cut(s)	351, 922, 2076
AclI	AACGTT	1 cut(s)	1218
AclWI	GGATC	1 cut(s)	632
AcoI	YGGCCR	2 cut(s)	48, 1277
AcsI	RAATTY	6 cut(s)	37, 205, 421, 721, 1073, 1626
AcuI	CTGAAG	4 cut(s)	686, 969, 1675, 1682
AfaI	GTAC	4 cut(s)	235, 842, 1892, 2163
AfiI	CCNNNNNNNGG	4 cut(s)	1358, 1499, 1809, 2252
AflIII	ACRYGT	1 cut(s)	2140
AgeI	ACCGGT	1 cut(s)	1581
AjnI	CCWGG	6 cut(s)	45, 914, 1279, 1395, 2022, 2353
AjuI	GAANNNNNNNTTGG	6 cut(s)	165, 197, 279, 311, 610, 642
Alw21I	GWGCWC	1 cut(s)	603
Alw26I	GTCTC	4 cut(s)	334, 1056, 1324, 2109
AlwI	GGATC	1 cut(s)	632
AoxI	GGCC	6 cut(s)	48, 1008, 1277, 1800, 1962, 2254
ApoI	RAATTY	6 cut(s)	37, 205, 421, 721, 1073, 1626
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
AseI	ATTAAT	1 cut(s)	1146
AsiGI	ACCGGT	1 cut(s)	1581
Asp700I	GAANNNNTTC	2 cut(s)	1688, 1851
Asp718I	GGTACC	1 cut(s)	1890
AspS9I	GGNCC	4 cut(s)	1265, 1800, 2057, 2228
AsuHPI	GGTGA	8 cut(s)	46, 115, 352, 372, 514, 892, 1571, 1813
AsuII	TTCGAA	1 cut(s)	988
AvaII	GGWCC	3 cut(s)	1265, 2057, 2228
BalI	TGGCCA	2 cut(s)	50, 1279
BanI	GGYRCC	2 cut(s)	1361, 1890
BanII	GRGCYC	2 cut(s)	1870, 2247
BauI	CACGAG	1 cut(s)	129
BbsI	GAAGAC	1 cut(s)	2011
Bbv12I	GWGCWC	1 cut(s)	603
BccI	CCATC	9 cut(s)	299, 406, 760, 1090, 1316, 1627, 1811, 2219, 2358
BciT130I	CCWGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
BclI	TGATCA	2 cut(s)	1716, 1896
BcoDI	GTCTC	4 cut(s)	334, 1056, 1324, 2109
BfaI	CTAG	5 cut(s)	966, 972, 1019, 1907, 2073
BfmI	CTRYAG	3 cut(s)	111, 1165, 2315
BfuAI	ACCTGC	2 cut(s)	391, 1470
Bme1390I	CCNGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
Bme18I	GGWCC	3 cut(s)	1265, 2057, 2228
BmgT120I	GGNCC	4 cut(s)	1265, 1800, 2057, 2228
BmiI	GGNNCC	6 cut(s)	920, 1266, 1363, 1801, 1884, 1892
BmrFI	CCNGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	2 cut(s)	984, 1537
BmuI	ACTGGG	1 cut(s)	703
BoxI	GACNNNNGTC	2 cut(s)	69, 1316
BpiI	GAAGAC	1 cut(s)	2011
Bpu14I	TTCGAA	1 cut(s)	988
BpuEI	CTTGAG	1 cut(s)	1038
BsaBI	GATNNNNATC	1 cut(s)	863
BsaI	GGTCTC	2 cut(s)	1324, 2109
BsaJI	CCNNGG	4 cut(s)	45, 1011, 1078, 1886
BsaWI	WCCGGW	1 cut(s)	1581
BsaXI	ACNNNNNCTCC	2 cut(s)	99, 129
Bsc4I	CCNNNNNNNGG	4 cut(s)	1358, 1499, 1809, 2252
Bse118I	RCCGGY	1 cut(s)	1581
Bse1I	ACTGG	2 cut(s)	709, 1280
Bse3DI	GCAATG	4 cut(s)	444, 467, 1008, 2333
Bse8I	GATNNNNATC	1 cut(s)	863
BseBI	CCWGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
BseDI	CCNNGG	4 cut(s)	45, 1011, 1078, 1886
BseGI	GGATG	4 cut(s)	768, 1552, 1680, 2350
BseJI	GATNNNNATC	1 cut(s)	863
BseLI	CCNNNNNNNGG	4 cut(s)	1358, 1499, 1809, 2252
BseMI	GCAATG	4 cut(s)	444, 467, 1008, 2333
BseMII	CTCAG	5 cut(s)	229, 324, 603, 1218, 1434
BseNI	ACTGG	2 cut(s)	709, 1280
BseRI	GAGGAG	4 cut(s)	551, 2097, 2179, 2330
BshFI	GGCC	6 cut(s)	50, 1010, 1279, 1802, 1964, 2256
BshNI	GGYRCC	2 cut(s)	1361, 1890
BshTI	ACCGGT	1 cut(s)	1581
BsiHKAI	GWGCWC	1 cut(s)	603
BsiSI	CCGG	2 cut(s)	1582, 2253
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	4 cut(s)	1358, 1499, 1809, 2252
BsmAI	GTCTC	4 cut(s)	334, 1056, 1324, 2109
BsmFI	GGGAC	1 cut(s)	77
BsmI	GAATGC	2 cut(s)	1690, 1766
BsnI	GGCC	6 cut(s)	50, 1010, 1279, 1802, 1964, 2256
Bso31I	GGTCTC	2 cut(s)	1324, 2109
Bsp119I	TTCGAA	1 cut(s)	988
Bsp1286I	GDGCHC	3 cut(s)	603, 1870, 2247
Bsp143I	GATC	4 cut(s)	637, 1716, 1896, 2364
Bsp19I	CCATGG	2 cut(s)	1011, 1886
BspACI	CCGC	3 cut(s)	351, 922, 2076
BspANI	GGCC	6 cut(s)	50, 1010, 1279, 1802, 1964, 2256
BspCNI	CTCAG	5 cut(s)	228, 325, 602, 1217, 1433
BspHI	TCATGA	2 cut(s)	1680, 1713
BspLI	GGNNCC	6 cut(s)	920, 1266, 1363, 1801, 1884, 1892
BspMAI	CTGCAG	1 cut(s)	2319
BspMI	ACCTGC	2 cut(s)	391, 1470
BspPI	GGATC	1 cut(s)	632
BspQI	GCTCTTC	2 cut(s)	654, 990
BspT104I	TTCGAA	1 cut(s)	988
BspT107I	GGYRCC	2 cut(s)	1361, 1890
BspTNI	GGTCTC	2 cut(s)	1324, 2109
BsrDI	GCAATG	4 cut(s)	444, 467, 1008, 2333
BsrFI	RCCGGY	1 cut(s)	1581
BsrI	ACTGG	2 cut(s)	709, 1280
BssAI	RCCGGY	1 cut(s)	1581
BssECI	CCNNGG	4 cut(s)	45, 1011, 1078, 1886
BssMI	GATC	4 cut(s)	637, 1716, 1896, 2364
BssSI	CACGAG	1 cut(s)	129
BssT1I	CCWWGG	3 cut(s)	1011, 1078, 1886
Bst2BI	CACGAG	1 cut(s)	129
Bst2UI	CCWGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
Bst4CI	ACNGT	5 cut(s)	202, 930, 1335, 1645, 1825
Bst6I	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
BstBI	TTCGAA	1 cut(s)	988
BstC8I	GCNNGC	3 cut(s)	808, 1008, 1881
BstDEI	CTNAG	7 cut(s)	215, 333, 475, 589, 1085, 1204, 1420
BstDSI	CCRYGG	2 cut(s)	1011, 1886
BstF5I	GGATG	4 cut(s)	768, 1552, 1680, 2350
BstKTI	GATC	4 cut(s)	640, 1719, 1899, 2367
BstMAI	GTCTC	4 cut(s)	334, 1056, 1324, 2109
BstMBI	GATC	4 cut(s)	637, 1716, 1896, 2364
BstMWI	GCNNNNNNNGC	6 cut(s)	383, 1007, 1361, 1657, 2009, 2164
BstNI	CCWGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
BstNSI	RCATGY	5 cut(s)	850, 1117, 1705, 2031, 2144
BstPAI	GACNNNNGTC	2 cut(s)	69, 1316
BstSCI	CCNGG	6 cut(s)	45, 914, 1279, 1395, 2022, 2353
BstSFI	CTRYAG	3 cut(s)	111, 1165, 2315
BstV2I	GAAGAC	1 cut(s)	2011
BstXI	CCANNNNNNTGG	2 cut(s)	1275, 1308
BsuRI	GGCC	6 cut(s)	50, 1010, 1279, 1802, 1964, 2256
BtgI	CCRYGG	2 cut(s)	1011, 1886
BtsCI	GGATG	4 cut(s)	768, 1552, 1680, 2350
BtsIMutI	CAGTG	2 cut(s)	302, 1641
BveI	ACCTGC	2 cut(s)	391, 1470
Cac8I	GCNNGC	3 cut(s)	808, 1008, 1881
CciI	TCATGA	2 cut(s)	1680, 1713
Cfr10I	RCCGGY	1 cut(s)	1581
Cfr13I	GGNCC	4 cut(s)	1265, 1800, 2057, 2228
CseI	GACGC	1 cut(s)	1007
CsiI	ACCWGGT	1 cut(s)	914
Csp6I	GTAC	4 cut(s)	234, 841, 1891, 2162
CspAI	ACCGGT	1 cut(s)	1581
CviQI	GTAC	4 cut(s)	234, 841, 1891, 2162
DdeI	CTNAG	7 cut(s)	215, 333, 475, 589, 1085, 1204, 1420
DpnI	GATC	4 cut(s)	639, 1718, 1898, 2366
DpnII	GATC	4 cut(s)	637, 1716, 1896, 2364
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	2 cut(s)	48, 1277
Eam1104I	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
EarI	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
Eco130I	CCWWGG	3 cut(s)	1011, 1078, 1886
Eco147I	AGGCCT	1 cut(s)	1964
Eco24I	GRGCYC	2 cut(s)	1870, 2247
Eco31I	GGTCTC	2 cut(s)	1324, 2109
Eco32I	GATATC	1 cut(s)	1438
Eco47I	GGWCC	3 cut(s)	1265, 2057, 2228
Eco57I	CTGAAG	4 cut(s)	686, 969, 1675, 1682
EcoO109I	RGGNCCY	1 cut(s)	2057
EcoRI	GAATTC	2 cut(s)	37, 1626
EcoRII	CCWGG	6 cut(s)	45, 914, 1279, 1395, 2022, 2353
EcoRV	GATATC	1 cut(s)	1438
EcoT14I	CCWWGG	3 cut(s)	1011, 1078, 1886
EcoT38I	GRGCYC	2 cut(s)	1870, 2247
ErhI	CCWWGG	3 cut(s)	1011, 1078, 1886
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 309, 341
FaqI	GGGAC	1 cut(s)	77
FauNDI	CATATG	2 cut(s)	456, 1507
FbaI	TGATCA	2 cut(s)	1716, 1896
FblI	GTMKAC	1 cut(s)	1530
FokI	GGATG	4 cut(s)	775, 1559, 1687, 2337
FriOI	GRGCYC	2 cut(s)	1870, 2247
FspBI	CTAG	5 cut(s)	966, 972, 1019, 1907, 2073
HaeIII	GGCC	6 cut(s)	50, 1010, 1279, 1802, 1964, 2256
HapII	CCGG	2 cut(s)	1582, 2253
HgaI	GACGC	1 cut(s)	1007
HincII	GTYRAC	3 cut(s)	586, 826, 1188
HindII	GTYRAC	3 cut(s)	586, 826, 1188
HindIII	AAGCTT	2 cut(s)	609, 2359
HinfI	GANTC	8 cut(s)	221, 569, 644, 818, 827, 1312, 1348, 1405
HpaII	CCGG	2 cut(s)	1582, 2253
HphI	GGTGA	8 cut(s)	46, 115, 352, 372, 514, 892, 1571, 1813
Hpy166II	GTNNAC	6 cut(s)	586, 826, 1068, 1188, 1311, 1531
Hpy8I	GTNNAC	6 cut(s)	586, 826, 1068, 1188, 1311, 1531
Hpy99I	CGWCG	1 cut(s)	2003
HpyCH4III	ACNGT	5 cut(s)	202, 930, 1335, 1645, 1825
HpyCH4IV	ACGT	3 cut(s)	992, 1218, 1388
HpyF10VI	GCNNNNNNNGC	6 cut(s)	383, 1007, 1361, 1657, 2009, 2164
HpyF3I	CTNAG	7 cut(s)	215, 333, 475, 589, 1085, 1204, 1420
HpySE526I	ACGT	3 cut(s)	992, 1218, 1388
KpnI	GGTACC	1 cut(s)	1894
Ksp22I	TGATCA	2 cut(s)	1716, 1896
Kzo9I	GATC	4 cut(s)	637, 1716, 1896, 2364
LguI	GCTCTTC	2 cut(s)	654, 990
LmnI	GCTCC	5 cut(s)	107, 1303, 1888, 2207, 2343
LweI	GCATC	2 cut(s)	984, 1537
MabI	ACCWGGT	1 cut(s)	914
MaeI	CTAG	5 cut(s)	966, 972, 1019, 1907, 2073
MaeII	ACGT	3 cut(s)	992, 1218, 1388
MaeIII	GTNAC	8 cut(s)	502, 790, 1384, 1639, 1819, 1949, 2030, 2299
MalI	GATC	4 cut(s)	639, 1718, 1898, 2366
MboI	GATC	4 cut(s)	637, 1716, 1896, 2364
MfeI	CAATTG	2 cut(s)	1431, 2232
MhlI	GDGCHC	3 cut(s)	603, 1870, 2247
MlsI	TGGCCA	2 cut(s)	50, 1279
MluNI	TGGCCA	2 cut(s)	50, 1279
MlyI	GAGTC	3 cut(s)	812, 821, 1306
Mox20I	TGGCCA	2 cut(s)	50, 1279
MroXI	GAANNNNTTC	2 cut(s)	1688, 1851
MscI	TGGCCA	2 cut(s)	50, 1279
MseI	TTAA	5 cut(s)	576, 719, 1146, 2196, 2219
MslI	CAYNNNNRTG	4 cut(s)	1148, 1248, 2120, 2145
Msp20I	TGGCCA	2 cut(s)	50, 1279
MspA1I	CMGCKG	3 cut(s)	1451, 1553, 2314
MspI	CCGG	2 cut(s)	1582, 2253
MspR9I	CCNGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
MunI	CAATTG	2 cut(s)	1431, 2232
Mva1269I	GAATGC	2 cut(s)	1690, 1766
MvaI	CCWGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
MwoI	GCNNNNNNNGC	6 cut(s)	383, 1007, 1361, 1657, 2009, 2164
NcoI	CCATGG	2 cut(s)	1011, 1886
NdeI	CATATG	2 cut(s)	456, 1507
NdeII	GATC	4 cut(s)	637, 1716, 1896, 2364
NlaIV	GGNNCC	6 cut(s)	920, 1266, 1363, 1801, 1884, 1892
NmeAIII	GCCGAG	1 cut(s)	1849
NmuCI	GTSAC	5 cut(s)	502, 790, 1639, 1819, 1949
NspI	RCATGY	5 cut(s)	850, 1117, 1705, 2031, 2144
NspV	TTCGAA	1 cut(s)	988
PagI	TCATGA	2 cut(s)	1680, 1713
PaqCI	CACCTGC	1 cut(s)	391
PceI	AGGCCT	1 cut(s)	1964
PciI	ACATGT	1 cut(s)	2140
PciSI	GCTCTTC	2 cut(s)	654, 990
PctI	GAATGC	2 cut(s)	1690, 1766
PdmI	GAANNNNTTC	2 cut(s)	1688, 1851
PfeI	GAWTC	5 cut(s)	221, 569, 644, 1348, 1405
PflMI	CCANNNNNTGG	1 cut(s)	1809
PfoI	TCCNGGA	1 cut(s)	2353
PinAI	ACCGGT	1 cut(s)	1581
PleI	GAGTC	3 cut(s)	812, 821, 1306
PpsI	GAGTC	3 cut(s)	812, 821, 1306
PpuMI	RGGWCCY	1 cut(s)	2057
PscI	ACATGT	1 cut(s)	2140
PshAI	GACNNNNGTC	2 cut(s)	69, 1316
PshBI	ATTAAT	1 cut(s)	1146
Psp1406I	AACGTT	1 cut(s)	1218
Psp5II	RGGWCCY	1 cut(s)	2057
Psp6I	CCWGG	6 cut(s)	45, 914, 1279, 1395, 2022, 2353
PspGI	CCWGG	6 cut(s)	45, 914, 1279, 1395, 2022, 2353
PspN4I	GGNNCC	6 cut(s)	920, 1266, 1363, 1801, 1884, 1892
PspPI	GGNCC	4 cut(s)	1265, 1800, 2057, 2228
PspPPI	RGGWCCY	1 cut(s)	2057
PstI	CTGCAG	1 cut(s)	2319
PvuII	CAGCTG	3 cut(s)	1451, 1553, 2314
RsaI	GTAC	4 cut(s)	235, 842, 1892, 2163
RsaNI	GTAC	4 cut(s)	234, 841, 1891, 2162
RseI	CAYNNNNRTG	4 cut(s)	1148, 1248, 2120, 2145
SapI	GCTCTTC	2 cut(s)	654, 990
SaqAI	TTAA	5 cut(s)	576, 719, 1146, 2196, 2219
Sau3AI	GATC	4 cut(s)	637, 1716, 1896, 2364
Sau96I	GGNCC	4 cut(s)	1265, 1800, 2057, 2228
SchI	GAGTC	3 cut(s)	812, 821, 1306
ScrFI	CCNGG	6 cut(s)	47, 916, 1281, 1397, 2024, 2355
SduI	GDGCHC	3 cut(s)	603, 1870, 2247
SexAI	ACCWGGT	1 cut(s)	914
SfaNI	GCATC	2 cut(s)	984, 1537
SfcI	CTRYAG	3 cut(s)	111, 1165, 2315
SfuI	TTCGAA	1 cut(s)	988
SinI	GGWCC	3 cut(s)	1265, 2057, 2228
SmiMI	CAYNNNNRTG	4 cut(s)	1148, 1248, 2120, 2145
SmlI	CTYRAG	1 cut(s)	1053
SmoI	CTYRAG	1 cut(s)	1053
SseBI	AGGCCT	1 cut(s)	1964
SsiI	CCGC	3 cut(s)	351, 922, 2076
SspI	AATATT	1 cut(s)	265
SspMI	CTAG	5 cut(s)	966, 972, 1019, 1907, 2073
StuI	AGGCCT	1 cut(s)	1964
StyD4I	CCNGG	6 cut(s)	45, 914, 1279, 1395, 2022, 2353
StyI	CCWWGG	3 cut(s)	1011, 1078, 1886
TaaI	ACNGT	5 cut(s)	202, 930, 1335, 1645, 1825
TaiI	ACGT	3 cut(s)	995, 1221, 1391
TaqI	TCGA	6 cut(s)	188, 654, 882, 988, 1320, 2126
TaqII	GACCGA	1 cut(s)	470
TatI	WGTACW	3 cut(s)	233, 840, 2161
TauI	GCSGC	1 cut(s)	2079
TfiI	GAWTC	5 cut(s)	221, 569, 644, 1348, 1405
Tru1I	TTAA	5 cut(s)	576, 719, 1146, 2196, 2219
Tru9I	TTAA	5 cut(s)	576, 719, 1146, 2196, 2219
TscAI	CASTG	2 cut(s)	309, 1648
TseFI	GTSAC	5 cut(s)	502, 790, 1639, 1819, 1949
Tsp45I	GTSAC	5 cut(s)	502, 790, 1639, 1819, 1949
TspRI	CASTG	2 cut(s)	309, 1648
Van91I	CCANNNNNTGG	1 cut(s)	1809
VpaK11BI	GGWCC	3 cut(s)	1265, 2057, 2228
VspI	ATTAAT	1 cut(s)	1146
XapI	RAATTY	6 cut(s)	37, 205, 421, 721, 1073, 1626
XceI	RCATGY	5 cut(s)	850, 1117, 1705, 2031, 2144
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1085
XmiI	GTMKAC	1 cut(s)	1530
XmnI	GAANNNNTTC	2 cut(s)	1688, 1851
XspI	CTAG	5 cut(s)	966, 972, 1019, 1907, 2073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.