Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370 |
| malus_domestica | MD15G1082100.v1.1 |
| prunus_persica | Prupe.1G434800_v2.0.a1 |
| pyrus_communis | pycom15g07690 |
| rosa_chinensis | RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011 |
| rosa_laevigata | RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679 |
| rosa_multiflora | Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00160680 Rroxscaffold_7G00160690 |
| rosa_rugosa | Rorug06G0362900 Rorug06G0363000 |
| rosa_samantha | Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200 |
| rosa_wichuraiana | Rw6G041170 Rw6G041180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 289 |
| Acc36I | ACCTGC | 2 cut(s) | 289, 1374 |
| AccB1I | GGYRCC | 1 cut(s) | 1265 |
| AccI | GTMKAC | 1 cut(s) | 1434 |
| AccII | CGCG | 1 cut(s) | 806 |
| AciI | CCGC | 2 cut(s) | 147, 249 |
| AclI | AACGTT | 1 cut(s) | 1122 |
| AclWI | GGATC | 1 cut(s) | 530 |
| AcoI | YGGCCR | 1 cut(s) | 1181 |
| AcsI | RAATTY | 7 cut(s) | 103, 319, 619, 799, 809, 963, 977 |
| AcuI | CTGAAG | 1 cut(s) | 584 |
| AfaI | GTAC | 4 cut(s) | 133, 740, 790, 1446 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1262, 1403 |
| AjnI | CCWGG | 2 cut(s) | 1183, 1299 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 63, 95, 177, 209, 508, 540 |
| Alw21I | GWGCWC | 1 cut(s) | 501 |
| Alw26I | GTCTC | 2 cut(s) | 960, 1228 |
| AlwI | GGATC | 1 cut(s) | 530 |
| AoxI | GGCC | 3 cut(s) | 912, 1113, 1181 |
| ApeKI | GCWGC | 6 cut(s) | 149, 152, 218, 368, 1199, 1352 |
| ApoI | RAATTY | 7 cut(s) | 103, 319, 619, 799, 809, 963, 977 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 938, 970 |
| AseI | ATTAAT | 1 cut(s) | 1050 |
| AspS9I | GGNCC | 1 cut(s) | 1169 |
| AsuHPI | GGTGA | 4 cut(s) | 13, 250, 270, 412 |
| AsuII | TTCGAA | 1 cut(s) | 892 |
| AvaII | GGWCC | 1 cut(s) | 1169 |
| AxyI | CCTNAGG | 1 cut(s) | 852 |
| BalI | TGGCCA | 1 cut(s) | 1183 |
| BanI | GGYRCC | 1 cut(s) | 1265 |
| BauI | CACGAG | 1 cut(s) | 27 |
| BbsI | GAAGAC | 1 cut(s) | 701 |
| Bbv12I | GWGCWC | 1 cut(s) | 501 |
| BbvI | GCAGC | 6 cut(s) | 136, 139, 230, 380, 1211, 1364 |
| BccI | CCATC | 5 cut(s) | 197, 304, 658, 994, 1220 |
| BciT130I | CCWGG | 2 cut(s) | 1185, 1301 |
| BcoDI | GTCTC | 2 cut(s) | 960, 1228 |
| BfaI | CTAG | 3 cut(s) | 870, 876, 1463 |
| BfmI | CTRYAG | 2 cut(s) | 9, 1069 |
| BfuAI | ACCTGC | 2 cut(s) | 289, 1374 |
| BisI | GCNGC | 6 cut(s) | 150, 153, 219, 369, 1200, 1353 |
| BlsI | GCNGC | 6 cut(s) | 151, 154, 220, 370, 1201, 1354 |
| Bme1390I | CCNGG | 2 cut(s) | 1185, 1301 |
| Bme18I | GGWCC | 1 cut(s) | 1169 |
| BmgT120I | GGNCC | 1 cut(s) | 1169 |
| BmiI | GGNNCC | 2 cut(s) | 1170, 1267 |
| BmrFI | CCNGG | 2 cut(s) | 1185, 1301 |
| BmrI | ACTGGG | 1 cut(s) | 601 |
| BmsI | GCATC | 1 cut(s) | 888 |
| BmuI | ACTGGG | 1 cut(s) | 601 |
| BpiI | GAAGAC | 1 cut(s) | 701 |
| Bpu14I | TTCGAA | 1 cut(s) | 892 |
| BpuEI | CTTGAG | 1 cut(s) | 942 |
| Bsa29I | ATCGAT | 1 cut(s) | 1224 |
| BsaI | GGTCTC | 1 cut(s) | 1228 |
| BsaJI | CCNNGG | 2 cut(s) | 915, 982 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 27 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1262, 1403 |
| Bse1I | ACTGG | 2 cut(s) | 607, 1184 |
| Bse21I | CCTNAGG | 1 cut(s) | 852 |
| Bse3DI | GCAATG | 3 cut(s) | 342, 365, 912 |
| BseBI | CCWGG | 2 cut(s) | 1185, 1301 |
| BseCI | ATCGAT | 1 cut(s) | 1224 |
| BseDI | CCNNGG | 2 cut(s) | 915, 982 |
| BseGI | GGATG | 1 cut(s) | 666 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1262, 1403 |
| BseMI | GCAATG | 3 cut(s) | 342, 365, 912 |
| BseMII | CTCAG | 6 cut(s) | 127, 222, 501, 843, 1122, 1338 |
| BseNI | ACTGG | 2 cut(s) | 607, 1184 |
| BseRI | GAGGAG | 1 cut(s) | 449 |
| BseXI | GCAGC | 6 cut(s) | 136, 139, 230, 380, 1211, 1364 |
| Bsh1236I | CGCG | 1 cut(s) | 806 |
| BshFI | GGCC | 3 cut(s) | 914, 1115, 1183 |
| BshNI | GGYRCC | 1 cut(s) | 1265 |
| BshVI | ATCGAT | 1 cut(s) | 1224 |
| BsiHKAI | GWGCWC | 1 cut(s) | 501 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1262, 1403 |
| BsmAI | GTCTC | 2 cut(s) | 960, 1228 |
| BsnI | GGCC | 3 cut(s) | 914, 1115, 1183 |
| Bso31I | GGTCTC | 1 cut(s) | 1228 |
| Bsp119I | TTCGAA | 1 cut(s) | 892 |
| Bsp1286I | GDGCHC | 1 cut(s) | 501 |
| Bsp143I | GATC | 1 cut(s) | 535 |
| Bsp19I | CCATGG | 1 cut(s) | 915 |
| Bsp68I | TCGCGA | 1 cut(s) | 806 |
| BspACI | CCGC | 2 cut(s) | 147, 249 |
| BspANI | GGCC | 3 cut(s) | 914, 1115, 1183 |
| BspCNI | CTCAG | 6 cut(s) | 126, 223, 500, 844, 1121, 1337 |
| BspDI | ATCGAT | 1 cut(s) | 1224 |
| BspFNI | CGCG | 1 cut(s) | 806 |
| BspLI | GGNNCC | 2 cut(s) | 1170, 1267 |
| BspMI | ACCTGC | 2 cut(s) | 289, 1374 |
| BspPI | GGATC | 1 cut(s) | 530 |
| BspQI | GCTCTTC | 2 cut(s) | 552, 894 |
| BspT104I | TTCGAA | 1 cut(s) | 892 |
| BspT107I | GGYRCC | 1 cut(s) | 1265 |
| BspTNI | GGTCTC | 1 cut(s) | 1228 |
| BsrDI | GCAATG | 3 cut(s) | 342, 365, 912 |
| BsrI | ACTGG | 2 cut(s) | 607, 1184 |
| BssECI | CCNNGG | 2 cut(s) | 915, 982 |
| BssMI | GATC | 1 cut(s) | 535 |
| BssSI | CACGAG | 1 cut(s) | 27 |
| BssT1I | CCWWGG | 2 cut(s) | 915, 982 |
| Bst2BI | CACGAG | 1 cut(s) | 27 |
| Bst2UI | CCWGG | 2 cut(s) | 1185, 1301 |
| Bst4CI | ACNGT | 3 cut(s) | 100, 406, 1239 |
| Bst6I | CTCTTC | 3 cut(s) | 529, 552, 894 |
| BstBI | TTCGAA | 1 cut(s) | 892 |
| BstC8I | GCNNGC | 2 cut(s) | 912, 1019 |
| BstDEI | CTNAG | 8 cut(s) | 113, 231, 373, 487, 852, 989, 1108, 1324 |
| BstDSI | CCRYGG | 1 cut(s) | 915 |
| BstF5I | GGATG | 1 cut(s) | 666 |
| BstFNI | CGCG | 1 cut(s) | 806 |
| BstKTI | GATC | 1 cut(s) | 538 |
| BstMAI | GTCTC | 2 cut(s) | 960, 1228 |
| BstMBI | GATC | 1 cut(s) | 535 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 281, 911, 1265 |
| BstNI | CCWGG | 2 cut(s) | 1185, 1301 |
| BstNSI | RCATGY | 1 cut(s) | 1021 |
| BstSCI | CCNGG | 2 cut(s) | 1183, 1299 |
| BstSFI | CTRYAG | 2 cut(s) | 9, 1069 |
| BstUI | CGCG | 1 cut(s) | 806 |
| BstV1I | GCAGC | 6 cut(s) | 136, 139, 230, 380, 1211, 1364 |
| BstV2I | GAAGAC | 1 cut(s) | 701 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1179, 1212 |
| Bsu15I | ATCGAT | 1 cut(s) | 1224 |
| Bsu36I | CCTNAGG | 1 cut(s) | 852 |
| BsuRI | GGCC | 3 cut(s) | 914, 1115, 1183 |
| BsuTUI | ATCGAT | 1 cut(s) | 1224 |
| BtgI | CCRYGG | 1 cut(s) | 915 |
| BtsCI | GGATG | 1 cut(s) | 666 |
| BtsIMutI | CAGTG | 2 cut(s) | 105, 200 |
| BtuMI | TCGCGA | 1 cut(s) | 806 |
| BveI | ACCTGC | 2 cut(s) | 289, 1374 |
| Cac8I | GCNNGC | 2 cut(s) | 912, 1019 |
| Cfr13I | GGNCC | 1 cut(s) | 1169 |
| ClaI | ATCGAT | 1 cut(s) | 1224 |
| CseI | GACGC | 1 cut(s) | 911 |
| Csp6I | GTAC | 4 cut(s) | 132, 739, 789, 1445 |
| CviAII | CATG | 5 cut(s) | 916, 928, 997, 1018, 1117 |
| CviQI | GTAC | 4 cut(s) | 132, 739, 789, 1445 |
| DdeI | CTNAG | 8 cut(s) | 113, 231, 373, 487, 852, 989, 1108, 1324 |
| DpnI | GATC | 1 cut(s) | 537 |
| DpnII | GATC | 1 cut(s) | 535 |
| DraI | TTTAAA | 1 cut(s) | 618 |
| EaeI | YGGCCR | 1 cut(s) | 1181 |
| Eam1104I | CTCTTC | 3 cut(s) | 529, 552, 894 |
| EarI | CTCTTC | 3 cut(s) | 529, 552, 894 |
| Eco130I | CCWWGG | 2 cut(s) | 915, 982 |
| Eco31I | GGTCTC | 1 cut(s) | 1228 |
| Eco32I | GATATC | 1 cut(s) | 1342 |
| Eco47I | GGWCC | 1 cut(s) | 1169 |
| Eco57I | CTGAAG | 1 cut(s) | 584 |
| Eco81I | CCTNAGG | 1 cut(s) | 852 |
| EcoRII | CCWGG | 2 cut(s) | 1183, 1299 |
| EcoRV | GATATC | 1 cut(s) | 1342 |
| EcoT14I | CCWWGG | 2 cut(s) | 915, 982 |
| ErhI | CCWWGG | 2 cut(s) | 915, 982 |
| FaeI | CATG | 5 cut(s) | 919, 931, 1000, 1021, 1120 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 63, 95, 207, 239 |
| FatI | CATG | 5 cut(s) | 915, 927, 996, 1017, 1116 |
| FauNDI | CATATG | 2 cut(s) | 354, 1411 |
| FblI | GTMKAC | 1 cut(s) | 1434 |
| Fnu4HI | GCNGC | 6 cut(s) | 150, 153, 219, 369, 1200, 1353 |
| FokI | GGATG | 1 cut(s) | 673 |
| Fsp4HI | GCNGC | 6 cut(s) | 150, 153, 219, 369, 1200, 1353 |
| FspBI | CTAG | 3 cut(s) | 870, 876, 1463 |
| GluI | GCNGC | 6 cut(s) | 150, 153, 219, 369, 1200, 1353 |
| HaeIII | GGCC | 3 cut(s) | 914, 1115, 1183 |
| HgaI | GACGC | 1 cut(s) | 911 |
| Hin1II | CATG | 5 cut(s) | 919, 931, 1000, 1021, 1120 |
| HincII | GTYRAC | 2 cut(s) | 484, 1092 |
| HindII | GTYRAC | 2 cut(s) | 484, 1092 |
| HindIII | AAGCTT | 1 cut(s) | 507 |
| HinfI | GANTC | 8 cut(s) | 119, 467, 542, 716, 725, 1216, 1252, 1309 |
| HphI | GGTGA | 4 cut(s) | 13, 250, 270, 412 |
| Hpy166II | GTNNAC | 5 cut(s) | 484, 972, 1092, 1215, 1435 |
| Hpy188I | TCNGA | 8 cut(s) | 116, 168, 232, 466, 490, 535, 1111, 1314 |
| Hpy188III | TCNNGA | 7 cut(s) | 444, 539, 713, 805, 959, 1009, 1463 |
| Hpy8I | GTNNAC | 5 cut(s) | 484, 972, 1092, 1215, 1435 |
| HpyAV | CCTTC | 3 cut(s) | 86, 1126, 1279 |
| HpyCH4III | ACNGT | 3 cut(s) | 100, 406, 1239 |
| HpyCH4IV | ACGT | 3 cut(s) | 896, 1122, 1292 |
| HpyCH4V | TGCA | 7 cut(s) | 155, 211, 358, 704, 748, 844, 910 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 281, 911, 1265 |
| HpyF3I | CTNAG | 8 cut(s) | 113, 231, 373, 487, 852, 989, 1108, 1324 |
| HpySE526I | ACGT | 3 cut(s) | 896, 1122, 1292 |
| Hsp92II | CATG | 5 cut(s) | 919, 931, 1000, 1021, 1120 |
| Kzo9I | GATC | 1 cut(s) | 535 |
| LguI | GCTCTTC | 2 cut(s) | 552, 894 |
| LmnI | GCTCC | 2 cut(s) | 5, 1207 |
| Lsp1109I | GCAGC | 6 cut(s) | 136, 139, 230, 380, 1211, 1364 |
| LweI | GCATC | 1 cut(s) | 888 |
| MaeI | CTAG | 3 cut(s) | 870, 876, 1463 |
| MaeII | ACGT | 3 cut(s) | 896, 1122, 1292 |
| MaeIII | GTNAC | 3 cut(s) | 400, 688, 1288 |
| MalI | GATC | 1 cut(s) | 537 |
| MboI | GATC | 1 cut(s) | 535 |
| MfeI | CAATTG | 1 cut(s) | 1335 |
| MhlI | GDGCHC | 1 cut(s) | 501 |
| MlsI | TGGCCA | 1 cut(s) | 1183 |
| MluNI | TGGCCA | 1 cut(s) | 1183 |
| MlyI | GAGTC | 2 cut(s) | 710, 1210 |
| Mox20I | TGGCCA | 1 cut(s) | 1183 |
| MscI | TGGCCA | 1 cut(s) | 1183 |
| MseI | TTAA | 4 cut(s) | 474, 617, 765, 1050 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1052, 1152 |
| Msp20I | TGGCCA | 1 cut(s) | 1183 |
| MspA1I | CMGCKG | 2 cut(s) | 149, 626 |
| MspR9I | CCNGG | 2 cut(s) | 1185, 1301 |
| MunI | CAATTG | 1 cut(s) | 1335 |
| MvaI | CCWGG | 2 cut(s) | 1185, 1301 |
| MvnI | CGCG | 1 cut(s) | 806 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 281, 911, 1265 |
| NcoI | CCATGG | 1 cut(s) | 915 |
| NdeI | CATATG | 2 cut(s) | 354, 1411 |
| NdeII | GATC | 1 cut(s) | 535 |
| NlaIII | CATG | 5 cut(s) | 919, 931, 1000, 1021, 1120 |
| NlaIV | GGNNCC | 2 cut(s) | 1170, 1267 |
| NmuCI | GTSAC | 2 cut(s) | 400, 688 |
| NruI | TCGCGA | 1 cut(s) | 806 |
| NspI | RCATGY | 1 cut(s) | 1021 |
| NspV | TTCGAA | 1 cut(s) | 892 |
| PaeI | GCATGC | 1 cut(s) | 1021 |
| PaqCI | CACCTGC | 1 cut(s) | 289 |
| PciSI | GCTCTTC | 2 cut(s) | 552, 894 |
| PfeI | GAWTC | 6 cut(s) | 119, 467, 542, 725, 1252, 1309 |
| PkrI | GCNGC | 6 cut(s) | 151, 154, 220, 370, 1201, 1354 |
| PleI | GAGTC | 2 cut(s) | 710, 1210 |
| PpsI | GAGTC | 2 cut(s) | 710, 1210 |
| PshBI | ATTAAT | 1 cut(s) | 1050 |
| Psp1406I | AACGTT | 1 cut(s) | 1122 |
| Psp6I | CCWGG | 2 cut(s) | 1183, 1299 |
| PspGI | CCWGG | 2 cut(s) | 1183, 1299 |
| PspN4I | GGNNCC | 2 cut(s) | 1170, 1267 |
| PspPI | GGNCC | 1 cut(s) | 1169 |
| PvuII | CAGCTG | 1 cut(s) | 626 |
| RruI | TCGCGA | 1 cut(s) | 806 |
| RsaI | GTAC | 4 cut(s) | 133, 740, 790, 1446 |
| RsaNI | GTAC | 4 cut(s) | 132, 739, 789, 1445 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1052, 1152 |
| SapI | GCTCTTC | 2 cut(s) | 552, 894 |
| SaqAI | TTAA | 4 cut(s) | 474, 617, 765, 1050 |
| SatI | GCNGC | 6 cut(s) | 150, 153, 219, 369, 1200, 1353 |
| Sau3AI | GATC | 1 cut(s) | 535 |
| Sau96I | GGNCC | 1 cut(s) | 1169 |
| SchI | GAGTC | 2 cut(s) | 710, 1210 |
| ScrFI | CCNGG | 2 cut(s) | 1185, 1301 |
| SduI | GDGCHC | 1 cut(s) | 501 |
| SfaNI | GCATC | 1 cut(s) | 888 |
| SfcI | CTRYAG | 2 cut(s) | 9, 1069 |
| SfuI | TTCGAA | 1 cut(s) | 892 |
| SinI | GGWCC | 1 cut(s) | 1169 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1052, 1152 |
| SmlI | CTYRAG | 1 cut(s) | 957 |
| SmoI | CTYRAG | 1 cut(s) | 957 |
| SphI | GCATGC | 1 cut(s) | 1021 |
| SsiI | CCGC | 2 cut(s) | 147, 249 |
| SspMI | CTAG | 3 cut(s) | 870, 876, 1463 |
| StyD4I | CCNGG | 2 cut(s) | 1183, 1299 |
| StyI | CCWWGG | 2 cut(s) | 915, 982 |
| TaaI | ACNGT | 3 cut(s) | 100, 406, 1239 |
| TaiI | ACGT | 3 cut(s) | 899, 1125, 1295 |
| TaqI | TCGA | 3 cut(s) | 552, 892, 1224 |
| TaqII | GACCGA | 1 cut(s) | 368 |
| TatI | WGTACW | 3 cut(s) | 131, 738, 788 |
| TfiI | GAWTC | 6 cut(s) | 119, 467, 542, 725, 1252, 1309 |
| Tru1I | TTAA | 4 cut(s) | 474, 617, 765, 1050 |
| Tru9I | TTAA | 4 cut(s) | 474, 617, 765, 1050 |
| TscAI | CASTG | 2 cut(s) | 105, 207 |
| TseFI | GTSAC | 2 cut(s) | 400, 688 |
| TseI | GCWGC | 6 cut(s) | 149, 152, 218, 368, 1199, 1352 |
| Tsp45I | GTSAC | 2 cut(s) | 400, 688 |
| TspDTI | ATGAA | 7 cut(s) | 570, 586, 766, 944, 1133, 1145, 1431 |
| TspRI | CASTG | 2 cut(s) | 105, 207 |
| VpaK11BI | GGWCC | 1 cut(s) | 1169 |
| VspI | ATTAAT | 1 cut(s) | 1050 |
| XapI | RAATTY | 7 cut(s) | 103, 319, 619, 799, 809, 963, 977 |
| XbaI | TCTAGA | 1 cut(s) | 1462 |
| XceI | RCATGY | 1 cut(s) | 1021 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 989 |
| XmiI | GTMKAC | 1 cut(s) | 1434 |
| XspI | CTAG | 3 cut(s) | 870, 876, 1463 |