SWIM zinc finger family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G60560 AT1G60560 AT1G60560 |
| fragaria_vesca | FvH4_1g11391 |
| malus_domestica | MD14G1040800.v1.1 |
| prunus_persica | Prupe.7G172200_v2.0.a1 |
| pyrus_communis | pycom14g03460 |
| rosa_chinensis | RchiOBHm_Chr2g0098931 RchiOBHm_Chr2g0098941 RchiOBHm_Chr4g0406971 RchiOBHm_Chr7g0185761 RchiOBHm_Chr7g0219821 |
| rosa_laevigata | RLG00000016835 RLG00000036043 RLG00000036045 |
| rosa_multiflora | Rmu_sc0000600.1_g000016 Rmu_sc0000936.1_g000018 Rmu_sc0000936.1_g000019 Rmu_sc0007649.1_g000004 Rmu_sc0009833.1_g000012 Rmu_sc0027115.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00011620 Rroxscaffold_2G00143560 |
| rosa_rugosa | Rorug03G0254100 Rorug03G0293700 Rorug04G0076000 Rorug04G0076100 Rorug04G0076200 |
| rosa_samantha | Rh4AG141800 Rh4BG138900 Rh4DG135900 Rh5AG453500 Rh5AG453600 Rh5DG485000 Rh7DG249200 |
| rosa_wichuraiana | Rw0G006010 Rw2G009560 Rw4G011550 Rw5G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 639 |
| AccB1I | GGYRCC | 2 cut(s) | 639, 790 |
| AccBSI | CCGCTC | 1 cut(s) | 136 |
| AciI | CCGC | 2 cut(s) | 134, 327 |
| AcsI | RAATTY | 5 cut(s) | 427, 770, 1084, 1455, 1562 |
| AcuI | CTGAAG | 1 cut(s) | 750 |
| AdeI | CACNNNGTG | 1 cut(s) | 452 |
| AfaI | GTAC | 6 cut(s) | 508, 641, 1006, 1080, 1332, 1449 |
| AflIII | ACRYGT | 1 cut(s) | 954 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 565, 597 |
| AluBI | AGCT | 5 cut(s) | 149, 596, 835, 1097, 1351 |
| AluI | AGCT | 5 cut(s) | 149, 596, 835, 1097, 1351 |
| Alw21I | GWGCWC | 3 cut(s) | 184, 696, 758 |
| Alw44I | GTGCAC | 2 cut(s) | 180, 692 |
| AoxI | GGCC | 1 cut(s) | 1188 |
| ApaLI | GTGCAC | 2 cut(s) | 180, 692 |
| ApeKI | GCWGC | 4 cut(s) | 329, 440, 964, 1351 |
| ApoI | RAATTY | 5 cut(s) | 427, 770, 1084, 1455, 1562 |
| AseI | ATTAAT | 2 cut(s) | 405, 1625 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 580 |
| Asp718I | GGTACC | 1 cut(s) | 639 |
| AspS9I | GGNCC | 2 cut(s) | 108, 1372 |
| AsuC2I | CCSGG | 1 cut(s) | 1554 |
| AsuHPI | GGTGA | 2 cut(s) | 917, 988 |
| AvaII | GGWCC | 2 cut(s) | 108, 1372 |
| BaeGI | GKGCMC | 2 cut(s) | 184, 696 |
| BanI | GGYRCC | 2 cut(s) | 639, 790 |
| BbsI | GAAGAC | 1 cut(s) | 915 |
| Bbv12I | GWGCWC | 3 cut(s) | 184, 696, 758 |
| BbvI | GCAGC | 4 cut(s) | 316, 427, 951, 1338 |
| BcnI | CCSGG | 1 cut(s) | 1554 |
| BfaI | CTAG | 4 cut(s) | 122, 450, 885, 1541 |
| BglII | AGATCT | 1 cut(s) | 50 |
| BisI | GCNGC | 5 cut(s) | 134, 330, 441, 965, 1352 |
| BlsI | GCNGC | 5 cut(s) | 135, 331, 442, 966, 1353 |
| Bme1390I | CCNGG | 1 cut(s) | 1554 |
| Bme18I | GGWCC | 2 cut(s) | 108, 1372 |
| BmgT120I | GGNCC | 2 cut(s) | 108, 1372 |
| BmiI | GGNNCC | 3 cut(s) | 109, 641, 792 |
| BmrFI | CCNGG | 1 cut(s) | 1554 |
| BmsI | GCATC | 1 cut(s) | 1580 |
| BpiI | GAAGAC | 1 cut(s) | 915 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1340, 1372 |
| BpmI | CTGGAG | 1 cut(s) | 891 |
| BpuEI | CTTGAG | 4 cut(s) | 246, 1075, 1143, 1169 |
| BpuMI | CCSGG | 1 cut(s) | 1554 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1296 |
| BsaJI | CCNNGG | 2 cut(s) | 1476, 1503 |
| Bse1I | ACTGG | 3 cut(s) | 653, 874, 1211 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1296 |
| BseDI | CCNNGG | 2 cut(s) | 1476, 1503 |
| BseGI | GGATG | 3 cut(s) | 420, 1183, 1486 |
| BseJI | GATNNNNATC | 1 cut(s) | 1296 |
| BseMII | CTCAG | 2 cut(s) | 942, 1371 |
| BseNI | ACTGG | 3 cut(s) | 653, 874, 1211 |
| BseRI | GAGGAG | 1 cut(s) | 186 |
| BseSI | GKGCMC | 2 cut(s) | 184, 696 |
| BseXI | GCAGC | 4 cut(s) | 316, 427, 951, 1338 |
| BsgI | GTGCAG | 3 cut(s) | 315, 950, 1337 |
| BshFI | GGCC | 1 cut(s) | 1190 |
| BshNI | GGYRCC | 2 cut(s) | 639, 790 |
| BsiHKAI | GWGCWC | 3 cut(s) | 184, 696, 758 |
| BsiSI | CCGG | 1 cut(s) | 1553 |
| BsnI | GGCC | 1 cut(s) | 1190 |
| Bsp1286I | GDGCHC | 3 cut(s) | 184, 696, 758 |
| Bsp1407I | TGTACA | 1 cut(s) | 1004 |
| Bsp143I | GATC | 2 cut(s) | 50, 1039 |
| Bsp19I | CCATGG | 1 cut(s) | 1476 |
| BspACI | CCGC | 2 cut(s) | 134, 327 |
| BspANI | GGCC | 1 cut(s) | 1190 |
| BspCNI | CTCAG | 2 cut(s) | 941, 1370 |
| BspLI | GGNNCC | 3 cut(s) | 109, 641, 792 |
| BspT107I | GGYRCC | 2 cut(s) | 639, 790 |
| BsrBI | CCGCTC | 1 cut(s) | 136 |
| BsrGI | TGTACA | 1 cut(s) | 1004 |
| BsrI | ACTGG | 3 cut(s) | 653, 874, 1211 |
| BssECI | CCNNGG | 2 cut(s) | 1476, 1503 |
| BssMI | GATC | 2 cut(s) | 50, 1039 |
| BssT1I | CCWWGG | 2 cut(s) | 1476, 1503 |
| Bst4CI | ACNGT | 4 cut(s) | 361, 1037, 1471, 1526 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1244 |
| BstAUI | TGTACA | 1 cut(s) | 1004 |
| BstC8I | GCNNGC | 7 cut(s) | 374, 712, 716, 833, 969, 1609, 1613 |
| BstDEI | CTNAG | 3 cut(s) | 928, 1357, 1431 |
| BstDSI | CCRYGG | 1 cut(s) | 1476 |
| BstF5I | GGATG | 3 cut(s) | 420, 1183, 1486 |
| BstKTI | GATC | 2 cut(s) | 53, 1042 |
| BstMBI | GATC | 2 cut(s) | 50, 1039 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 747, 837, 1244, 1253 |
| BstNSI | RCATGY | 4 cut(s) | 208, 958, 1242, 1615 |
| BstSCI | CCNGG | 1 cut(s) | 1552 |
| BstSLI | GKGCMC | 2 cut(s) | 184, 696 |
| BstV1I | GCAGC | 4 cut(s) | 316, 427, 951, 1338 |
| BstV2I | GAAGAC | 1 cut(s) | 915 |
| BstX2I | RGATCY | 1 cut(s) | 50 |
| BstYI | RGATCY | 1 cut(s) | 50 |
| BsuRI | GGCC | 1 cut(s) | 1190 |
| BtgI | CCRYGG | 1 cut(s) | 1476 |
| BtsCI | GGATG | 3 cut(s) | 420, 1183, 1486 |
| BtsI | GCAGTG | 1 cut(s) | 94 |
| BtsIMutI | CAGTG | 4 cut(s) | 94, 357, 660, 867 |
| Cac8I | GCNNGC | 7 cut(s) | 374, 712, 716, 833, 969, 1609, 1613 |
| Cfr13I | GGNCC | 2 cut(s) | 108, 1372 |
| Csp6I | GTAC | 6 cut(s) | 507, 640, 1005, 1079, 1331, 1448 |
| CviQI | GTAC | 6 cut(s) | 507, 640, 1005, 1079, 1331, 1448 |
| DdeI | CTNAG | 3 cut(s) | 928, 1357, 1431 |
| DpnI | GATC | 2 cut(s) | 52, 1041 |
| DpnII | GATC | 2 cut(s) | 50, 1039 |
| DraIII | CACNNNGTG | 1 cut(s) | 452 |
| Eco130I | CCWWGG | 2 cut(s) | 1476, 1503 |
| Eco147I | AGGCCT | 1 cut(s) | 1190 |
| Eco32I | GATATC | 1 cut(s) | 981 |
| Eco47I | GGWCC | 2 cut(s) | 108, 1372 |
| Eco57I | CTGAAG | 1 cut(s) | 750 |
| EcoRV | GATATC | 1 cut(s) | 981 |
| EcoT14I | CCWWGG | 2 cut(s) | 1476, 1503 |
| ErhI | CCWWGG | 2 cut(s) | 1476, 1503 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 7, 39, 383, 415, 803, 835 |
| Fnu4HI | GCNGC | 5 cut(s) | 134, 330, 441, 965, 1352 |
| FokI | GGATG | 3 cut(s) | 427, 1190, 1493 |
| Fsp4HI | GCNGC | 5 cut(s) | 134, 330, 441, 965, 1352 |
| FspBI | CTAG | 4 cut(s) | 122, 450, 885, 1541 |
| GluI | GCNGC | 5 cut(s) | 134, 330, 441, 965, 1352 |
| GsuI | CTGGAG | 1 cut(s) | 891 |
| HaeIII | GGCC | 1 cut(s) | 1190 |
| HapII | CCGG | 1 cut(s) | 1553 |
| HincII | GTYRAC | 1 cut(s) | 1341 |
| HindII | GTYRAC | 1 cut(s) | 1341 |
| HinfI | GANTC | 8 cut(s) | 10, 379, 418, 724, 932, 1292, 1463, 1549 |
| HpaII | CCGG | 1 cut(s) | 1553 |
| HphI | GGTGA | 2 cut(s) | 917, 988 |
| Hpy166II | GTNNAC | 4 cut(s) | 182, 694, 1333, 1341 |
| Hpy188I | TCNGA | 4 cut(s) | 67, 931, 1120, 1462 |
| Hpy188III | TCNNGA | 5 cut(s) | 284, 728, 808, 1054, 1232 |
| Hpy8I | GTNNAC | 4 cut(s) | 182, 694, 1333, 1341 |
| HpyAV | CCTTC | 3 cut(s) | 295, 409, 1502 |
| HpyCH4III | ACNGT | 4 cut(s) | 361, 1037, 1471, 1526 |
| HpyCH4IV | ACGT | 1 cut(s) | 1407 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 747, 837, 1244, 1253 |
| HpyF3I | CTNAG | 3 cut(s) | 928, 1357, 1431 |
| HpySE526I | ACGT | 1 cut(s) | 1407 |
| KpnI | GGTACC | 1 cut(s) | 643 |
| Kzo9I | GATC | 2 cut(s) | 50, 1039 |
| LmnI | GCTCC | 3 cut(s) | 448, 872, 1094 |
| Lsp1109I | GCAGC | 4 cut(s) | 316, 427, 951, 1338 |
| LweI | GCATC | 1 cut(s) | 1580 |
| MaeI | CTAG | 4 cut(s) | 122, 450, 885, 1541 |
| MaeII | ACGT | 1 cut(s) | 1407 |
| MaeIII | GTNAC | 5 cut(s) | 284, 492, 1471, 1526, 1574 |
| MalI | GATC | 2 cut(s) | 52, 1041 |
| MbiI | CCGCTC | 1 cut(s) | 136 |
| MboI | GATC | 2 cut(s) | 50, 1039 |
| MboII | GAAGA | 6 cut(s) | 624, 743, 920, 1020, 1427, 1531 |
| MfeI | CAATTG | 2 cut(s) | 522, 672 |
| MflI | RGATCY | 1 cut(s) | 50 |
| MhlI | GDGCHC | 3 cut(s) | 184, 696, 758 |
| MlyI | GAGTC | 2 cut(s) | 19, 412 |
| MnlI | CCTC | 8 cut(s) | 73, 204, 207, 270, 1084, 1167, 1228, 1588 |
| MroXI | GAANNNNTTC | 1 cut(s) | 580 |
| MseI | TTAA | 6 cut(s) | 405, 431, 768, 921, 1218, 1625 |
| MslI | CAYNNNNRTG | 5 cut(s) | 66, 102, 215, 362, 1128 |
| MspA1I | CMGCKG | 2 cut(s) | 329, 835 |
| MspI | CCGG | 1 cut(s) | 1553 |
| MspR9I | CCNGG | 1 cut(s) | 1554 |
| MunI | CAATTG | 2 cut(s) | 522, 672 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 747, 837, 1244, 1253 |
| NciI | CCSGG | 1 cut(s) | 1554 |
| NcoI | CCATGG | 1 cut(s) | 1476 |
| NdeII | GATC | 2 cut(s) | 50, 1039 |
| NlaIV | GGNNCC | 3 cut(s) | 109, 641, 792 |
| NmuCI | GTSAC | 2 cut(s) | 284, 1574 |
| NspI | RCATGY | 4 cut(s) | 208, 958, 1242, 1615 |
| PaeI | GCATGC | 1 cut(s) | 1615 |
| PceI | AGGCCT | 1 cut(s) | 1190 |
| PciI | ACATGT | 1 cut(s) | 954 |
| PdmI | GAANNNNTTC | 1 cut(s) | 580 |
| PfeI | GAWTC | 6 cut(s) | 379, 724, 932, 1292, 1463, 1549 |
| PfoI | TCCNGGA | 1 cut(s) | 1552 |
| PkrI | GCNGC | 5 cut(s) | 135, 331, 442, 966, 1353 |
| PleI | GAGTC | 2 cut(s) | 18, 412 |
| PpsI | GAGTC | 2 cut(s) | 18, 412 |
| PscI | ACATGT | 1 cut(s) | 954 |
| PshBI | ATTAAT | 2 cut(s) | 405, 1625 |
| PspN4I | GGNNCC | 3 cut(s) | 109, 641, 792 |
| PspPI | GGNCC | 2 cut(s) | 108, 1372 |
| PsuI | RGATCY | 1 cut(s) | 50 |
| PvuII | CAGCTG | 1 cut(s) | 835 |
| RsaI | GTAC | 6 cut(s) | 508, 641, 1006, 1080, 1332, 1449 |
| RsaNI | GTAC | 6 cut(s) | 507, 640, 1005, 1079, 1331, 1448 |
| RseI | CAYNNNNRTG | 5 cut(s) | 66, 102, 215, 362, 1128 |
| SaqAI | TTAA | 6 cut(s) | 405, 431, 768, 921, 1218, 1625 |
| SatI | GCNGC | 5 cut(s) | 134, 330, 441, 965, 1352 |
| Sau3AI | GATC | 2 cut(s) | 50, 1039 |
| Sau96I | GGNCC | 2 cut(s) | 108, 1372 |
| SchI | GAGTC | 2 cut(s) | 19, 412 |
| ScrFI | CCNGG | 1 cut(s) | 1554 |
| SduI | GDGCHC | 3 cut(s) | 184, 696, 758 |
| SfaNI | GCATC | 1 cut(s) | 1580 |
| SinI | GGWCC | 2 cut(s) | 108, 1372 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 66, 102, 215, 362, 1128 |
| SmlI | CTYRAG | 4 cut(s) | 261, 1054, 1158, 1184 |
| SmoI | CTYRAG | 4 cut(s) | 261, 1054, 1158, 1184 |
| SphI | GCATGC | 1 cut(s) | 1615 |
| SseBI | AGGCCT | 1 cut(s) | 1190 |
| SsiI | CCGC | 2 cut(s) | 134, 327 |
| SspI | AATATT | 2 cut(s) | 745, 1222 |
| SspMI | CTAG | 4 cut(s) | 122, 450, 885, 1541 |
| StuI | AGGCCT | 1 cut(s) | 1190 |
| StyD4I | CCNGG | 1 cut(s) | 1552 |
| StyI | CCWWGG | 2 cut(s) | 1476, 1503 |
| TaaI | ACNGT | 4 cut(s) | 361, 1037, 1471, 1526 |
| TaiI | ACGT | 1 cut(s) | 1410 |
| TaqI | TCGA | 1 cut(s) | 1588 |
| TatI | WGTACW | 2 cut(s) | 1004, 1330 |
| TauI | GCSGC | 1 cut(s) | 136 |
| TfiI | GAWTC | 6 cut(s) | 379, 724, 932, 1292, 1463, 1549 |
| Tru1I | TTAA | 6 cut(s) | 405, 431, 768, 921, 1218, 1625 |
| Tru9I | TTAA | 6 cut(s) | 405, 431, 768, 921, 1218, 1625 |
| TscAI | CASTG | 4 cut(s) | 94, 364, 660, 874 |
| TseFI | GTSAC | 2 cut(s) | 284, 1574 |
| TseI | GCWGC | 4 cut(s) | 329, 440, 964, 1351 |
| Tsp45I | GTSAC | 2 cut(s) | 284, 1574 |
| TspDTI | ATGAA | 5 cut(s) | 199, 391, 1146, 1310, 1428 |
| TspRI | CASTG | 4 cut(s) | 94, 364, 660, 874 |
| VneI | GTGCAC | 2 cut(s) | 180, 692 |
| VpaK11BI | GGWCC | 2 cut(s) | 108, 1372 |
| VspI | ATTAAT | 2 cut(s) | 405, 1625 |
| XapI | RAATTY | 5 cut(s) | 427, 770, 1084, 1455, 1562 |
| XceI | RCATGY | 4 cut(s) | 208, 958, 1242, 1615 |
| XmnI | GAANNNNTTC | 1 cut(s) | 580 |
| XspI | CTAG | 4 cut(s) | 122, 450, 885, 1541 |