SWIM zinc finger family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G60560 AT1G60560 AT1G60560 |
| fragaria_vesca | FvH4_1g11391 |
| malus_domestica | MD14G1040800.v1.1 |
| prunus_persica | Prupe.7G172200_v2.0.a1 |
| pyrus_communis | pycom14g03460 |
| rosa_chinensis | RchiOBHm_Chr2g0098931 RchiOBHm_Chr2g0098941 RchiOBHm_Chr4g0406971 RchiOBHm_Chr7g0185761 RchiOBHm_Chr7g0219821 |
| rosa_laevigata | RLG00000016835 RLG00000036043 RLG00000036045 |
| rosa_multiflora | Rmu_sc0000600.1_g000016 Rmu_sc0000936.1_g000018 Rmu_sc0000936.1_g000019 Rmu_sc0007649.1_g000004 Rmu_sc0009833.1_g000012 Rmu_sc0027115.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00011620 Rroxscaffold_2G00143560 |
| rosa_rugosa | Rorug03G0254100 Rorug03G0293700 Rorug04G0076000 Rorug04G0076100 Rorug04G0076200 |
| rosa_samantha | Rh4AG141800 Rh4BG138900 Rh4DG135900 Rh5AG453500 Rh5AG453600 Rh5DG485000 Rh7DG249200 |
| rosa_wichuraiana | Rw0G006010 Rw2G009560 Rw4G011550 Rw5G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 152 |
| AccI | GTMKAC | 1 cut(s) | 141 |
| AccII | CGCG | 1 cut(s) | 187 |
| AclWI | GGATC | 2 cut(s) | 35, 48 |
| AcsI | RAATTY | 3 cut(s) | 86, 146, 169 |
| AfaI | GTAC | 1 cut(s) | 239 |
| AgsI | TTSAA | 3 cut(s) | 14, 194, 274 |
| AluBI | AGCT | 2 cut(s) | 228, 268 |
| AluI | AGCT | 2 cut(s) | 228, 268 |
| AlwI | GGATC | 2 cut(s) | 35, 48 |
| ApeKI | GCWGC | 2 cut(s) | 116, 225 |
| ApoI | RAATTY | 3 cut(s) | 86, 146, 169 |
| AspS9I | GGNCC | 1 cut(s) | 81 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| AvaII | GGWCC | 1 cut(s) | 81 |
| BamHI | GGATCC | 1 cut(s) | 40 |
| BbvI | GCAGC | 2 cut(s) | 128, 237 |
| BglII | AGATCT | 1 cut(s) | 25 |
| BisI | GCNGC | 2 cut(s) | 117, 226 |
| BlsI | GCNGC | 2 cut(s) | 118, 227 |
| Bme18I | GGWCC | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 1 cut(s) | 81 |
| BmiI | GGNNCC | 1 cut(s) | 42 |
| BmsI | GCATC | 1 cut(s) | 103 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 44, 76, 47, 79 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| Bse1I | ACTGG | 1 cut(s) | 47 |
| BseNI | ACTGG | 1 cut(s) | 47 |
| BseRI | GAGGAG | 2 cut(s) | 52, 68 |
| BseXI | GCAGC | 2 cut(s) | 128, 237 |
| Bsh1236I | CGCG | 1 cut(s) | 187 |
| BsiSI | CCGG | 1 cut(s) | 32 |
| Bsp143I | GATC | 2 cut(s) | 25, 40 |
| BspFNI | CGCG | 1 cut(s) | 187 |
| BspLI | GGNNCC | 1 cut(s) | 42 |
| BspPI | GGATC | 2 cut(s) | 35, 48 |
| BsrI | ACTGG | 1 cut(s) | 47 |
| BssMI | GATC | 2 cut(s) | 25, 40 |
| BstFNI | CGCG | 1 cut(s) | 187 |
| BstKTI | GATC | 2 cut(s) | 28, 43 |
| BstMBI | GATC | 2 cut(s) | 25, 40 |
| BstUI | CGCG | 1 cut(s) | 187 |
| BstV1I | GCAGC | 2 cut(s) | 128, 237 |
| BstX2I | RGATCY | 2 cut(s) | 25, 40 |
| BstYI | RGATCY | 2 cut(s) | 25, 40 |
| BtsIMutI | CAGTG | 1 cut(s) | 54 |
| Cfr13I | GGNCC | 1 cut(s) | 81 |
| Csp6I | GTAC | 1 cut(s) | 238 |
| CviJI | RGCY | 4 cut(s) | 119, 165, 228, 268 |
| CviKI_1 | RGCY | 4 cut(s) | 119, 165, 228, 268 |
| CviQI | GTAC | 1 cut(s) | 238 |
| DpnI | GATC | 2 cut(s) | 27, 42 |
| DpnII | GATC | 2 cut(s) | 25, 40 |
| Eco47I | GGWCC | 1 cut(s) | 81 |
| FaiI | YATR | 4 cut(s) | 20, 132, 152, 264 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 212, 244 |
| FblI | GTMKAC | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 2 cut(s) | 117, 226 |
| Fsp4HI | GCNGC | 2 cut(s) | 117, 226 |
| GluI | GCNGC | 2 cut(s) | 117, 226 |
| HapII | CCGG | 1 cut(s) | 32 |
| HindIII | AAGCTT | 1 cut(s) | 266 |
| HinfI | GANTC | 2 cut(s) | 14, 103 |
| HpaII | CCGG | 1 cut(s) | 32 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 301 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 107 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyAV | CCTTC | 2 cut(s) | 155, 214 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| Kzo9I | GATC | 2 cut(s) | 25, 40 |
| LpnPI | CCDG | 3 cut(s) | 23, 45, 60 |
| Lsp1109I | GCAGC | 2 cut(s) | 128, 237 |
| LweI | GCATC | 1 cut(s) | 103 |
| MalI | GATC | 2 cut(s) | 27, 42 |
| MboI | GATC | 2 cut(s) | 25, 40 |
| MboII | GAAGA | 2 cut(s) | 20, 219 |
| MflI | RGATCY | 2 cut(s) | 25, 40 |
| MluCI | AATT | 5 cut(s) | 86, 94, 146, 169, 195 |
| MmeI | TCCRAC | 1 cut(s) | 206 |
| MnlI | CCTC | 4 cut(s) | 46, 73, 131, 195 |
| MseI | TTAA | 1 cut(s) | 230 |
| MspI | CCGG | 1 cut(s) | 32 |
| MvnI | CGCG | 1 cut(s) | 187 |
| NdeII | GATC | 2 cut(s) | 25, 40 |
| NlaIV | GGNNCC | 1 cut(s) | 42 |
| PfeI | GAWTC | 2 cut(s) | 14, 103 |
| PkrI | GCNGC | 2 cut(s) | 118, 227 |
| PsiI | TTATAA | 1 cut(s) | 152 |
| PspN4I | GGNNCC | 1 cut(s) | 42 |
| PspPI | GGNCC | 1 cut(s) | 81 |
| PsuI | RGATCY | 2 cut(s) | 25, 40 |
| RsaI | GTAC | 1 cut(s) | 239 |
| RsaNI | GTAC | 1 cut(s) | 238 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| SatI | GCNGC | 2 cut(s) | 117, 226 |
| Sau3AI | GATC | 2 cut(s) | 25, 40 |
| Sau96I | GGNCC | 1 cut(s) | 81 |
| SetI | ASST | 3 cut(s) | 230, 270, 280 |
| SfaNI | GCATC | 1 cut(s) | 103 |
| SgeI | CNNG | 9 cut(s) | 35, 44, 50, 59, 90, 112, 119, 149, 198 |
| SinI | GGWCC | 1 cut(s) | 81 |
| Sse9I | AATT | 5 cut(s) | 86, 94, 146, 169, 195 |
| TaqII | GACCGA | 1 cut(s) | 150 |
| TasI | AATT | 5 cut(s) | 86, 94, 146, 169, 195 |
| TfiI | GAWTC | 2 cut(s) | 14, 103 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| TscAI | CASTG | 1 cut(s) | 54 |
| TseI | GCWGC | 2 cut(s) | 116, 225 |
| TspRI | CASTG | 1 cut(s) | 54 |
| VpaK11BI | GGWCC | 1 cut(s) | 81 |
| XapI | RAATTY | 3 cut(s) | 86, 146, 169 |
| XmiI | GTMKAC | 1 cut(s) | 141 |