SWIM zinc finger family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G60560 AT1G60560 AT1G60560 |
| fragaria_vesca | FvH4_1g11391 |
| malus_domestica | MD14G1040800.v1.1 |
| prunus_persica | Prupe.7G172200_v2.0.a1 |
| pyrus_communis | pycom14g03460 |
| rosa_chinensis | RchiOBHm_Chr2g0098931 RchiOBHm_Chr2g0098941 RchiOBHm_Chr4g0406971 RchiOBHm_Chr7g0185761 RchiOBHm_Chr7g0219821 |
| rosa_laevigata | RLG00000016835 RLG00000036043 RLG00000036045 |
| rosa_multiflora | Rmu_sc0000600.1_g000016 Rmu_sc0000936.1_g000018 Rmu_sc0000936.1_g000019 Rmu_sc0007649.1_g000004 Rmu_sc0009833.1_g000012 Rmu_sc0027115.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00011620 Rroxscaffold_2G00143560 |
| rosa_rugosa | Rorug03G0254100 Rorug03G0293700 Rorug04G0076000 Rorug04G0076100 Rorug04G0076200 |
| rosa_samantha | Rh4AG141800 Rh4BG138900 Rh4DG135900 Rh5AG453500 Rh5AG453600 Rh5DG485000 Rh7DG249200 |
| rosa_wichuraiana | Rw0G006010 Rw2G009560 Rw4G011550 Rw5G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 167 |
| AccB1I | GGYRCC | 3 cut(s) | 1042, 1305, 1682 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 293, 517 |
| AccI | GTMKAC | 2 cut(s) | 156, 506 |
| AciI | CCGC | 3 cut(s) | 544, 968, 1804 |
| AclWI | GGATC | 7 cut(s) | 50, 63, 428, 528, 599, 787, 1429 |
| AcoI | YGGCCR | 1 cut(s) | 661 |
| AcsI | RAATTY | 5 cut(s) | 101, 161, 184, 1320, 1427 |
| AcuI | CTGAAG | 2 cut(s) | 408, 579 |
| AcvI | CACGTG | 1 cut(s) | 1129 |
| AfaI | GTAC | 2 cut(s) | 254, 1401 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 293, 517, 550 |
| AflII | CTTAAG | 1 cut(s) | 710 |
| AjnI | CCWGG | 3 cut(s) | 990, 1417, 1616 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1573, 1605 |
| AluBI | AGCT | 4 cut(s) | 243, 283, 794, 1216 |
| AluI | AGCT | 4 cut(s) | 243, 283, 794, 1216 |
| Alw21I | GWGCWC | 3 cut(s) | 730, 1174, 1200 |
| Alw26I | GTCTC | 3 cut(s) | 677, 700, 1364 |
| Alw44I | GTGCAC | 2 cut(s) | 726, 1196 |
| AlwI | GGATC | 7 cut(s) | 50, 63, 428, 528, 599, 787, 1429 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 602 |
| AoxI | GGCC | 3 cut(s) | 307, 661, 1614 |
| ApaLI | GTGCAC | 2 cut(s) | 726, 1196 |
| ApeKI | GCWGC | 4 cut(s) | 131, 240, 791, 1216 |
| ApoI | RAATTY | 5 cut(s) | 101, 161, 184, 1320, 1427 |
| AspLEI | GCGC | 1 cut(s) | 561 |
| AspS9I | GGNCC | 2 cut(s) | 96, 308 |
| AsuC2I | CCSGG | 2 cut(s) | 312, 1310 |
| AsuHPI | GGTGA | 1 cut(s) | 185 |
| AsuII | TTCGAA | 1 cut(s) | 853 |
| AvaII | GGWCC | 1 cut(s) | 96 |
| BaeGI | GKGCMC | 3 cut(s) | 730, 1200, 1315 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 698, 731, 954, 987 |
| BalI | TGGCCA | 1 cut(s) | 663 |
| BamHI | GGATCC | 1 cut(s) | 55 |
| BanI | GGYRCC | 3 cut(s) | 1042, 1305, 1682 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 381, 413 |
| BbrPI | CACGTG | 1 cut(s) | 1129 |
| BbsI | GAAGAC | 1 cut(s) | 1073 |
| Bbv12I | GWGCWC | 3 cut(s) | 730, 1174, 1200 |
| BbvCI | CCTCAGC | 1 cut(s) | 866 |
| BbvI | GCAGC | 4 cut(s) | 143, 252, 803, 1203 |
| BccI | CCATC | 5 cut(s) | 10, 287, 672, 802, 1756 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1226, 1260 |
| BciT130I | CCWGG | 3 cut(s) | 992, 1419, 1618 |
| BciVI | GTATCC | 2 cut(s) | 583, 726 |
| BclI | TGATCA | 2 cut(s) | 529, 1003 |
| BcnI | CCSGG | 2 cut(s) | 312, 1310 |
| BcoDI | GTCTC | 3 cut(s) | 677, 700, 1364 |
| BfaI | CTAG | 4 cut(s) | 401, 1406, 1665, 1773 |
| BfmI | CTRYAG | 1 cut(s) | 1113 |
| BfrI | CTTAAG | 1 cut(s) | 710 |
| BfuI | GTATCC | 2 cut(s) | 583, 726 |
| BglII | AGATCT | 3 cut(s) | 40, 1497, 1603 |
| BisI | GCNGC | 4 cut(s) | 132, 241, 792, 1217 |
| BlsI | GCNGC | 4 cut(s) | 133, 242, 793, 1218 |
| Bme1390I | CCNGG | 5 cut(s) | 312, 992, 1310, 1419, 1618 |
| Bme18I | GGWCC | 1 cut(s) | 96 |
| BmgT120I | GGNCC | 2 cut(s) | 96, 308 |
| BmiI | GGNNCC | 7 cut(s) | 57, 310, 316, 1044, 1307, 1649, 1684 |
| BmrFI | CCNGG | 5 cut(s) | 312, 992, 1310, 1419, 1618 |
| BmrI | ACTGGG | 1 cut(s) | 463 |
| BmsI | GCATC | 6 cut(s) | 118, 289, 549, 1112, 1446, 1796 |
| BmuI | ACTGGG | 1 cut(s) | 463 |
| BpiI | GAAGAC | 1 cut(s) | 1073 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 59, 91, 62, 94, 1205, 1237 |
| Bpu10I | CCTNAGC | 1 cut(s) | 866 |
| Bpu14I | TTCGAA | 1 cut(s) | 853 |
| BpuEI | CTTGAG | 1 cut(s) | 1619 |
| BpuMI | CCSGG | 2 cut(s) | 312, 1310 |
| BsaAI | YACGTR | 1 cut(s) | 1129 |
| BsaBI | GATNNNNATC | 2 cut(s) | 494, 1161 |
| BsaJI | CCNNGG | 5 cut(s) | 310, 990, 1341, 1368, 1686 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 293, 517, 550 |
| Bse1I | ACTGG | 5 cut(s) | 47, 62, 469, 1235, 1540 |
| Bse3DI | GCAATG | 1 cut(s) | 1715 |
| Bse8I | GATNNNNATC | 2 cut(s) | 494, 1161 |
| BseBI | CCWGG | 3 cut(s) | 992, 1419, 1618 |
| BseDI | CCNNGG | 5 cut(s) | 310, 990, 1341, 1368, 1686 |
| BseGI | GGATG | 3 cut(s) | 495, 540, 1351 |
| BseJI | GATNNNNATC | 2 cut(s) | 494, 1161 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 293, 517, 550 |
| BseMI | GCAATG | 1 cut(s) | 1715 |
| BseMII | CTCAG | 3 cut(s) | 857, 1203, 1236 |
| BseNI | ACTGG | 5 cut(s) | 47, 62, 469, 1235, 1540 |
| BseRI | GAGGAG | 2 cut(s) | 67, 83 |
| BseSI | GKGCMC | 3 cut(s) | 730, 1200, 1315 |
| BseXI | GCAGC | 4 cut(s) | 143, 252, 803, 1203 |
| BsgI | GTGCAG | 1 cut(s) | 1202 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1240 |
| BshFI | GGCC | 3 cut(s) | 309, 663, 1616 |
| BshNI | GGYRCC | 3 cut(s) | 1042, 1305, 1682 |
| BsiEI | CGRYCG | 1 cut(s) | 1240 |
| BsiHKAI | GWGCWC | 3 cut(s) | 730, 1174, 1200 |
| BsiSI | CCGG | 2 cut(s) | 312, 1309 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 293, 517, 550 |
| BsmAI | GTCTC | 3 cut(s) | 677, 700, 1364 |
| BsmBI | CGTCTC | 1 cut(s) | 1364 |
| BsmI | GAATGC | 1 cut(s) | 182 |
| BsnI | GGCC | 3 cut(s) | 309, 663, 1616 |
| Bsp119I | TTCGAA | 1 cut(s) | 853 |
| Bsp1286I | GDGCHC | 4 cut(s) | 730, 1174, 1200, 1315 |
| Bsp1407I | TGTACA | 1 cut(s) | 1399 |
| BspACI | CCGC | 3 cut(s) | 544, 968, 1804 |
| BspANI | GGCC | 3 cut(s) | 309, 663, 1616 |
| BspCNI | CTCAG | 3 cut(s) | 858, 1204, 1235 |
| BspHI | TCATGA | 1 cut(s) | 121 |
| BspLI | GGNNCC | 7 cut(s) | 57, 310, 316, 1044, 1307, 1649, 1684 |
| BspPI | GGATC | 7 cut(s) | 50, 63, 428, 528, 599, 787, 1429 |
| BspT104I | TTCGAA | 1 cut(s) | 853 |
| BspT107I | GGYRCC | 3 cut(s) | 1042, 1305, 1682 |
| BspTI | CTTAAG | 1 cut(s) | 710 |
| BsrDI | GCAATG | 1 cut(s) | 1715 |
| BsrGI | TGTACA | 1 cut(s) | 1399 |
| BsrI | ACTGG | 5 cut(s) | 47, 62, 469, 1235, 1540 |
| BssECI | CCNNGG | 5 cut(s) | 310, 990, 1341, 1368, 1686 |
| BssT1I | CCWWGG | 2 cut(s) | 1341, 1368 |
| Bst2UI | CCWGG | 3 cut(s) | 992, 1419, 1618 |
| Bst4CI | ACNGT | 6 cut(s) | 325, 648, 1358, 1391, 1445, 1687 |
| Bst6I | CTCTTC | 2 cut(s) | 384, 1770 |
| BstAFI | CTTAAG | 1 cut(s) | 710 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1109 |
| BstAUI | TGTACA | 1 cut(s) | 1399 |
| BstBAI | YACGTR | 1 cut(s) | 1129 |
| BstBI | TTCGAA | 1 cut(s) | 853 |
| BstC8I | GCNNGC | 3 cut(s) | 538, 1475, 1808 |
| BstDEI | CTNAG | 4 cut(s) | 866, 976, 1212, 1222 |
| BstDSI | CCRYGG | 1 cut(s) | 1686 |
| BstF5I | GGATG | 3 cut(s) | 495, 540, 1351 |
| BstHHI | GCGC | 1 cut(s) | 561 |
| BstMAI | GTCTC | 3 cut(s) | 677, 700, 1364 |
| BstMCI | CGRYCG | 1 cut(s) | 1240 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 443, 1109, 1118 |
| BstNI | CCWGG | 3 cut(s) | 992, 1419, 1618 |
| BstNSI | RCATGY | 2 cut(s) | 550, 1481 |
| BstSCI | CCNGG | 5 cut(s) | 310, 990, 1308, 1417, 1616 |
| BstSFI | CTRYAG | 1 cut(s) | 1113 |
| BstSLI | GKGCMC | 3 cut(s) | 730, 1200, 1315 |
| BstV1I | GCAGC | 4 cut(s) | 143, 252, 803, 1203 |
| BstV2I | GAAGAC | 1 cut(s) | 1073 |
| BstX2I | RGATCY | 5 cut(s) | 40, 55, 520, 1497, 1603 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 485, 1710 |
| BstYI | RGATCY | 5 cut(s) | 40, 55, 520, 1497, 1603 |
| BsuI | GTATCC | 2 cut(s) | 583, 726 |
| BsuRI | GGCC | 3 cut(s) | 309, 663, 1616 |
| BtgI | CCRYGG | 1 cut(s) | 1686 |
| BtgZI | GCGATG | 1 cut(s) | 650 |
| BtsCI | GGATG | 3 cut(s) | 495, 540, 1351 |
| BtsI | GCAGTG | 2 cut(s) | 1313, 1703 |
| BtsIMutI | CAGTG | 3 cut(s) | 69, 1313, 1703 |
| Cac8I | GCNNGC | 3 cut(s) | 538, 1475, 1808 |
| CaiI | CAGNNNCTG | 1 cut(s) | 602 |
| CciI | TCATGA | 1 cut(s) | 121 |
| CfoI | GCGC | 1 cut(s) | 561 |
| Cfr13I | GGNCC | 2 cut(s) | 96, 308 |
| Csp6I | GTAC | 2 cut(s) | 253, 1400 |
| CviAII | CATG | 9 cut(s) | 122, 512, 547, 760, 776, 861, 941, 1478, 1531 |
| CviQI | GTAC | 2 cut(s) | 253, 1400 |
| DdeI | CTNAG | 4 cut(s) | 866, 976, 1212, 1222 |
| DraI | TTTAAA | 2 cut(s) | 919, 1030 |
| EaeI | YGGCCR | 1 cut(s) | 661 |
| Eam1104I | CTCTTC | 2 cut(s) | 384, 1770 |
| EarI | CTCTTC | 2 cut(s) | 384, 1770 |
| Eco130I | CCWWGG | 2 cut(s) | 1341, 1368 |
| Eco47I | GGWCC | 1 cut(s) | 96 |
| Eco57I | CTGAAG | 2 cut(s) | 408, 579 |
| Eco72I | CACGTG | 1 cut(s) | 1129 |
| EcoRII | CCWGG | 3 cut(s) | 990, 1417, 1616 |
| EcoT14I | CCWWGG | 2 cut(s) | 1341, 1368 |
| ErhI | CCWWGG | 2 cut(s) | 1341, 1368 |
| Esp3I | CGTCTC | 1 cut(s) | 1364 |
| FaeI | CATG | 9 cut(s) | 125, 515, 550, 763, 779, 864, 944, 1481, 1534 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 227, 259 |
| FatI | CATG | 9 cut(s) | 121, 511, 546, 759, 775, 860, 940, 1477, 1530 |
| FauI | CCCGC | 1 cut(s) | 1811 |
| FbaI | TGATCA | 2 cut(s) | 529, 1003 |
| FblI | GTMKAC | 2 cut(s) | 156, 506 |
| Fnu4HI | GCNGC | 4 cut(s) | 132, 241, 792, 1217 |
| FokI | GGATG | 3 cut(s) | 502, 527, 1358 |
| Fsp4HI | GCNGC | 4 cut(s) | 132, 241, 792, 1217 |
| FspBI | CTAG | 4 cut(s) | 401, 1406, 1665, 1773 |
| GlaI | GCGC | 1 cut(s) | 560 |
| GluI | GCNGC | 4 cut(s) | 132, 241, 792, 1217 |
| HaeIII | GGCC | 3 cut(s) | 309, 663, 1616 |
| HapII | CCGG | 2 cut(s) | 312, 1309 |
| HhaI | GCGC | 1 cut(s) | 561 |
| Hin1II | CATG | 9 cut(s) | 125, 515, 550, 763, 779, 864, 944, 1481, 1534 |
| Hin6I | GCGC | 1 cut(s) | 559 |
| HinP1I | GCGC | 1 cut(s) | 559 |
| HincII | GTYRAC | 1 cut(s) | 1523 |
| HindII | GTYRAC | 1 cut(s) | 1523 |
| HpaII | CCGG | 2 cut(s) | 312, 1309 |
| HphI | GGTGA | 1 cut(s) | 185 |
| Hpy166II | GTNNAC | 6 cut(s) | 157, 507, 728, 1198, 1523, 1693 |
| Hpy188I | TCNGA | 6 cut(s) | 9, 115, 598, 627, 1008, 1426 |
| Hpy8I | GTNNAC | 6 cut(s) | 157, 507, 728, 1198, 1523, 1693 |
| HpyAV | CCTTC | 4 cut(s) | 145, 229, 1536, 1779 |
| HpyCH4III | ACNGT | 6 cut(s) | 325, 648, 1358, 1391, 1445, 1687 |
| HpyCH4IV | ACGT | 5 cut(s) | 756, 922, 1128, 1272, 1832 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 443, 1109, 1118 |
| HpyF3I | CTNAG | 4 cut(s) | 866, 976, 1212, 1222 |
| HpySE526I | ACGT | 5 cut(s) | 756, 922, 1128, 1272, 1832 |
| Hsp92II | CATG | 9 cut(s) | 125, 515, 550, 763, 779, 864, 944, 1481, 1534 |
| HspAI | GCGC | 1 cut(s) | 559 |
| Ksp22I | TGATCA | 2 cut(s) | 529, 1003 |
| LmnI | GCTCC | 3 cut(s) | 288, 314, 1169 |
| Lsp1109I | GCAGC | 4 cut(s) | 143, 252, 803, 1203 |
| LweI | GCATC | 6 cut(s) | 118, 289, 549, 1112, 1446, 1796 |
| MaeI | CTAG | 4 cut(s) | 401, 1406, 1665, 1773 |
| MaeII | ACGT | 5 cut(s) | 756, 922, 1128, 1272, 1832 |
| MaeIII | GTNAC | 3 cut(s) | 1336, 1439, 1660 |
| MboII | GAAGA | 9 cut(s) | 35, 234, 401, 867, 1073, 1292, 1757, 1824, 1827 |
| MfeI | CAATTG | 1 cut(s) | 681 |
| MflI | RGATCY | 5 cut(s) | 40, 55, 520, 1497, 1603 |
| MhlI | GDGCHC | 4 cut(s) | 730, 1174, 1200, 1315 |
| MlsI | TGGCCA | 1 cut(s) | 663 |
| MluCI | AATT | 9 cut(s) | 101, 109, 161, 184, 515, 681, 1320, 1427, 1593 |
| MluNI | TGGCCA | 1 cut(s) | 663 |
| MmeI | TCCRAC | 2 cut(s) | 221, 1720 |
| MnlI | CCTC | 9 cut(s) | 61, 88, 210, 409, 851, 861, 1093, 1579, 1785 |
| Mox20I | TGGCCA | 1 cut(s) | 663 |
| MscI | TGGCCA | 1 cut(s) | 663 |
| MseI | TTAA | 5 cut(s) | 245, 711, 918, 1029, 1829 |
| MslI | CAYNNNNRTG | 3 cut(s) | 126, 545, 1708 |
| Msp20I | TGGCCA | 1 cut(s) | 663 |
| MspA1I | CMGCKG | 1 cut(s) | 968 |
| MspCI | CTTAAG | 1 cut(s) | 710 |
| MspI | CCGG | 2 cut(s) | 312, 1309 |
| MspR9I | CCNGG | 5 cut(s) | 312, 992, 1310, 1419, 1618 |
| MunI | CAATTG | 1 cut(s) | 681 |
| Mva1269I | GAATGC | 1 cut(s) | 182 |
| MvaI | CCWGG | 3 cut(s) | 992, 1419, 1618 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 443, 1109, 1118 |
| NciI | CCSGG | 2 cut(s) | 312, 1310 |
| NlaIII | CATG | 9 cut(s) | 125, 515, 550, 763, 779, 864, 944, 1481, 1534 |
| NlaIV | GGNNCC | 7 cut(s) | 57, 310, 316, 1044, 1307, 1649, 1684 |
| NmuCI | GTSAC | 2 cut(s) | 1439, 1660 |
| NspI | RCATGY | 2 cut(s) | 550, 1481 |
| NspV | TTCGAA | 1 cut(s) | 853 |
| PagI | TCATGA | 1 cut(s) | 121 |
| PctI | GAATGC | 1 cut(s) | 182 |
| PflFI | GACNNNGTC | 1 cut(s) | 755 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 293, 517 |
| PfoI | TCCNGGA | 1 cut(s) | 1417 |
| PkrI | GCNGC | 4 cut(s) | 133, 242, 793, 1218 |
| PmaCI | CACGTG | 1 cut(s) | 1129 |
| PmlI | CACGTG | 1 cut(s) | 1129 |
| Ppu21I | YACGTR | 1 cut(s) | 1129 |
| PsiI | TTATAA | 1 cut(s) | 167 |
| Psp6I | CCWGG | 3 cut(s) | 990, 1417, 1616 |
| PspCI | CACGTG | 1 cut(s) | 1129 |
| PspGI | CCWGG | 3 cut(s) | 990, 1417, 1616 |
| PspN4I | GGNNCC | 7 cut(s) | 57, 310, 316, 1044, 1307, 1649, 1684 |
| PspPI | GGNCC | 2 cut(s) | 96, 308 |
| PstNI | CAGNNNCTG | 1 cut(s) | 602 |
| PsuI | RGATCY | 5 cut(s) | 40, 55, 520, 1497, 1603 |
| PsyI | GACNNNGTC | 1 cut(s) | 755 |
| RsaI | GTAC | 2 cut(s) | 254, 1401 |
| RsaNI | GTAC | 2 cut(s) | 253, 1400 |
| RseI | CAYNNNNRTG | 3 cut(s) | 126, 545, 1708 |
| SaqAI | TTAA | 5 cut(s) | 245, 711, 918, 1029, 1829 |
| SatI | GCNGC | 4 cut(s) | 132, 241, 792, 1217 |
| Sau96I | GGNCC | 2 cut(s) | 96, 308 |
| ScrFI | CCNGG | 5 cut(s) | 312, 992, 1310, 1419, 1618 |
| SduI | GDGCHC | 4 cut(s) | 730, 1174, 1200, 1315 |
| SfaNI | GCATC | 6 cut(s) | 118, 289, 549, 1112, 1446, 1796 |
| SfcI | CTRYAG | 1 cut(s) | 1113 |
| SfuI | TTCGAA | 1 cut(s) | 853 |
| SinI | GGWCC | 1 cut(s) | 96 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 126, 545, 1708 |
| SmlI | CTYRAG | 2 cut(s) | 710, 1634 |
| SmoI | CTYRAG | 2 cut(s) | 710, 1634 |
| Sse9I | AATT | 9 cut(s) | 101, 109, 161, 184, 515, 681, 1320, 1427, 1593 |
| SsiI | CCGC | 3 cut(s) | 544, 968, 1804 |
| SspI | AATATT | 3 cut(s) | 874, 934, 1025 |
| SspMI | CTAG | 4 cut(s) | 401, 1406, 1665, 1773 |
| StyD4I | CCNGG | 5 cut(s) | 310, 990, 1308, 1417, 1616 |
| StyI | CCWWGG | 2 cut(s) | 1341, 1368 |
| TaaI | ACNGT | 6 cut(s) | 325, 648, 1358, 1391, 1445, 1687 |
| TaiI | ACGT | 5 cut(s) | 759, 925, 1131, 1275, 1835 |
| TaqI | TCGA | 6 cut(s) | 202, 423, 853, 1236, 1454, 1790 |
| TaqII | GACCGA | 2 cut(s) | 165, 1254 |
| TasI | AATT | 9 cut(s) | 101, 109, 161, 184, 515, 681, 1320, 1427, 1593 |
| TatI | WGTACW | 1 cut(s) | 1399 |
| Tru1I | TTAA | 5 cut(s) | 245, 711, 918, 1029, 1829 |
| Tru9I | TTAA | 5 cut(s) | 245, 711, 918, 1029, 1829 |
| TscAI | CASTG | 3 cut(s) | 69, 1320, 1710 |
| TseFI | GTSAC | 2 cut(s) | 1439, 1660 |
| TseI | GCWGC | 4 cut(s) | 131, 240, 791, 1216 |
| Tsp45I | GTSAC | 2 cut(s) | 1439, 1660 |
| TspDTI | ATGAA | 8 cut(s) | 17, 127, 197, 528, 568, 572, 601, 1266 |
| TspGWI | ACGGA | 1 cut(s) | 1660 |
| TspRI | CASTG | 3 cut(s) | 69, 1320, 1710 |
| Tth111I | GACNNNGTC | 1 cut(s) | 755 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 293, 517 |
| Vha464I | CTTAAG | 1 cut(s) | 710 |
| VneI | GTGCAC | 2 cut(s) | 726, 1196 |
| VpaK11BI | GGWCC | 1 cut(s) | 96 |
| XapI | RAATTY | 5 cut(s) | 101, 161, 184, 1320, 1427 |
| XceI | RCATGY | 2 cut(s) | 550, 1481 |
| XmiI | GTMKAC | 2 cut(s) | 156, 506 |
| XspI | CTAG | 4 cut(s) | 401, 1406, 1665, 1773 |