Pentatricopeptide repeat-containing protein At1g74850
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G60560 AT1G60560 AT1G60560 |
| fragaria_vesca | FvH4_1g11391 |
| malus_domestica | MD14G1040800.v1.1 |
| prunus_persica | Prupe.7G172200_v2.0.a1 |
| pyrus_communis | pycom14g03460 |
| rosa_chinensis | RchiOBHm_Chr2g0098931 RchiOBHm_Chr2g0098941 RchiOBHm_Chr4g0406971 RchiOBHm_Chr7g0185761 RchiOBHm_Chr7g0219821 |
| rosa_laevigata | RLG00000016835 RLG00000036043 RLG00000036045 |
| rosa_multiflora | Rmu_sc0000600.1_g000016 Rmu_sc0000936.1_g000018 Rmu_sc0000936.1_g000019 Rmu_sc0007649.1_g000004 Rmu_sc0009833.1_g000012 Rmu_sc0027115.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00011620 Rroxscaffold_2G00143560 |
| rosa_rugosa | Rorug03G0254100 Rorug03G0293700 Rorug04G0076000 Rorug04G0076100 Rorug04G0076200 |
| rosa_samantha | Rh4AG141800 Rh4BG138900 Rh4DG135900 Rh5AG453500 Rh5AG453600 Rh5DG485000 Rh7DG249200 |
| rosa_wichuraiana | Rw0G006010 Rw2G009560 Rw4G011550 Rw5G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 294, 304 |
| AcsI | RAATTY | 1 cut(s) | 99 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 1 cut(s) | 203 |
| Alw21I | GWGCWC | 1 cut(s) | 198 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 65 |
| ApoI | RAATTY | 1 cut(s) | 99 |
| AspS9I | GGNCC | 1 cut(s) | 66 |
| BbsI | GAAGAC | 1 cut(s) | 140 |
| Bbv12I | GWGCWC | 1 cut(s) | 198 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BisI | GCNGC | 1 cut(s) | 294 |
| BlsI | GCNGC | 1 cut(s) | 295 |
| BmgT120I | GGNCC | 1 cut(s) | 66 |
| BmsI | GCATC | 4 cut(s) | 243, 265, 280, 303 |
| BpiI | GAAGAC | 1 cut(s) | 140 |
| BpuEI | CTTGAG | 1 cut(s) | 326 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 168, 198 |
| BseGI | GGATG | 1 cut(s) | 292 |
| BseMII | CTCAG | 3 cut(s) | 120, 158, 231 |
| BseRI | GAGGAG | 1 cut(s) | 206 |
| BshFI | GGCC | 1 cut(s) | 67 |
| BsiHKAI | GWGCWC | 1 cut(s) | 198 |
| BsnI | GGCC | 1 cut(s) | 67 |
| Bsp1286I | GDGCHC | 1 cut(s) | 198 |
| Bsp143I | GATC | 1 cut(s) | 42 |
| BspACI | CCGC | 2 cut(s) | 294, 304 |
| BspANI | GGCC | 1 cut(s) | 67 |
| BspCNI | CTCAG | 3 cut(s) | 121, 159, 230 |
| BspMAI | CTGCAG | 1 cut(s) | 91 |
| BssMI | GATC | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 2 cut(s) | 20, 24 |
| BstDEI | CTNAG | 4 cut(s) | 129, 167, 217, 297 |
| BstF5I | GGATG | 1 cut(s) | 292 |
| BstKTI | GATC | 1 cut(s) | 45 |
| BstMBI | GATC | 1 cut(s) | 42 |
| BstNSI | RCATGY | 2 cut(s) | 26, 152 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstV2I | GAAGAC | 1 cut(s) | 140 |
| BsuRI | GGCC | 1 cut(s) | 67 |
| BtsCI | GGATG | 1 cut(s) | 292 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 2 cut(s) | 20, 24 |
| CaiI | CAGNNNCTG | 1 cut(s) | 95 |
| Cfr13I | GGNCC | 1 cut(s) | 66 |
| CviAII | CATG | 3 cut(s) | 23, 149, 238 |
| CviJI | RGCY | 2 cut(s) | 67, 215 |
| CviKI_1 | RGCY | 2 cut(s) | 67, 215 |
| DdeI | CTNAG | 4 cut(s) | 129, 167, 217, 297 |
| DpnI | GATC | 1 cut(s) | 44 |
| DpnII | GATC | 1 cut(s) | 42 |
| EcoT22I | ATGCAT | 1 cut(s) | 258 |
| FaeI | CATG | 3 cut(s) | 26, 152, 241 |
| FaiI | YATR | 6 cut(s) | 24, 41, 72, 150, 239, 267 |
| FatI | CATG | 3 cut(s) | 22, 148, 237 |
| Fnu4HI | GCNGC | 1 cut(s) | 294 |
| FokI | GGATG | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 294 |
| GluI | GCNGC | 1 cut(s) | 294 |
| HaeIII | GGCC | 1 cut(s) | 67 |
| Hin1II | CATG | 3 cut(s) | 26, 152, 241 |
| Hpy188I | TCNGA | 2 cut(s) | 97, 130 |
| HpyAV | CCTTC | 1 cut(s) | 44 |
| HpyCH4IV | ACGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 7 cut(s) | 18, 74, 89, 122, 141, 256, 269 |
| HpyF3I | CTNAG | 4 cut(s) | 129, 167, 217, 297 |
| HpySE526I | ACGT | 1 cut(s) | 106 |
| Hsp92II | CATG | 3 cut(s) | 26, 152, 241 |
| Kzo9I | GATC | 1 cut(s) | 42 |
| LmnI | GCTCC | 1 cut(s) | 193 |
| LpnPI | CCDG | 1 cut(s) | 263 |
| LweI | GCATC | 4 cut(s) | 243, 265, 280, 303 |
| MaeII | ACGT | 1 cut(s) | 106 |
| MalI | GATC | 1 cut(s) | 44 |
| MboI | GATC | 1 cut(s) | 42 |
| MboII | GAAGA | 3 cut(s) | 17, 145, 215 |
| MhlI | GDGCHC | 1 cut(s) | 198 |
| MluCI | AATT | 2 cut(s) | 99, 123 |
| MnlI | CCTC | 3 cut(s) | 170, 184, 226 |
| Mph1103I | ATGCAT | 1 cut(s) | 258 |
| MseI | TTAA | 3 cut(s) | 36, 186, 210 |
| NdeII | GATC | 1 cut(s) | 42 |
| NlaIII | CATG | 3 cut(s) | 26, 152, 241 |
| NsiI | ATGCAT | 1 cut(s) | 258 |
| NspI | RCATGY | 2 cut(s) | 26, 152 |
| PaeI | GCATGC | 1 cut(s) | 26 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PkrI | GCNGC | 1 cut(s) | 295 |
| PscI | ACATGT | 1 cut(s) | 148 |
| PspPI | GGNCC | 1 cut(s) | 66 |
| PstI | CTGCAG | 1 cut(s) | 91 |
| PstNI | CAGNNNCTG | 1 cut(s) | 95 |
| SaqAI | TTAA | 3 cut(s) | 36, 186, 210 |
| SatI | GCNGC | 1 cut(s) | 294 |
| Sau3AI | GATC | 1 cut(s) | 42 |
| Sau96I | GGNCC | 1 cut(s) | 66 |
| SduI | GDGCHC | 1 cut(s) | 198 |
| SetI | ASST | 7 cut(s) | 55, 64, 109, 181, 252, 284, 329 |
| SfaNI | GCATC | 4 cut(s) | 243, 265, 280, 303 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SmlI | CTYRAG | 1 cut(s) | 341 |
| SmoI | CTYRAG | 1 cut(s) | 341 |
| SphI | GCATGC | 1 cut(s) | 26 |
| Sse9I | AATT | 2 cut(s) | 99, 123 |
| SsiI | CCGC | 2 cut(s) | 294, 304 |
| SspI | AATATT | 1 cut(s) | 336 |
| TaiI | ACGT | 1 cut(s) | 109 |
| TasI | AATT | 2 cut(s) | 99, 123 |
| TauI | GCSGC | 1 cut(s) | 296 |
| Tru1I | TTAA | 3 cut(s) | 36, 186, 210 |
| Tru9I | TTAA | 3 cut(s) | 36, 186, 210 |
| TscAI | CASTG | 1 cut(s) | 225 |
| TspRI | CASTG | 1 cut(s) | 225 |
| XapI | RAATTY | 1 cut(s) | 99 |
| XceI | RCATGY | 2 cut(s) | 26, 152 |
| Zsp2I | ATGCAT | 1 cut(s) | 258 |