RchiOBHm_Chr7g0224151

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
46012963 .. 46013597
635 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20070

Sequence Viewer

Length: 174 bp
ATGGGTTGTGGCCTGTGGGGGATAATCAGATCAAGTTATGCAATGCAGAGTGAAATAAGCGAAACTGTTCATTCTGTCCACAATAAATTGGCTAACCCAGAAGACAATGCAGAGGGTCAGTCCTCCACTCATGTTGTTCAAGTGTTCAAGTCGAGTCTAGTGATAATGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

57

Amino Acids

6.22

Weight (kDa)

5.39

Isoelectric Point (pI)

65.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 140, 148
AoxI GGCC 1 cut(s) 10
Asp700I GAANNNNTTC 1 cut(s) 66
BbsI GAAGAC 1 cut(s) 108
BfaI CTAG 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 108
Bse3DI GCAATG 1 cut(s) 48
BseMI GCAATG 1 cut(s) 48
BshFI GGCC 1 cut(s) 12
BsnI GGCC 1 cut(s) 12
Bsp143I GATC 1 cut(s) 29
BspANI GGCC 1 cut(s) 12
BsrDI GCAATG 1 cut(s) 48
BssMI GATC 1 cut(s) 29
Bst4CI ACNGT 1 cut(s) 67
BstKTI GATC 1 cut(s) 32
BstMBI GATC 1 cut(s) 29
BstV2I GAAGAC 1 cut(s) 108
BsuRI GGCC 1 cut(s) 12
CspCI CAANNNNNGTGG 2 cut(s) 115, 150
CviAII CATG 1 cut(s) 131
CviJI RGCY 2 cut(s) 12, 92
CviKI_1 RGCY 2 cut(s) 12, 92
DpnI GATC 1 cut(s) 31
DpnII GATC 1 cut(s) 29
FaeI CATG 1 cut(s) 134
FaiI YATR 2 cut(s) 39, 132
FatI CATG 1 cut(s) 130
FspBI CTAG 1 cut(s) 158
HaeIII GGCC 1 cut(s) 12
Hin1II CATG 1 cut(s) 134
HinfI GANTC 1 cut(s) 154
Hpy166II GTNNAC 1 cut(s) 79
Hpy188I TCNGA 1 cut(s) 29
Hpy8I GTNNAC 1 cut(s) 79
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4V TGCA 3 cut(s) 41, 46, 110
Hsp92II CATG 1 cut(s) 134
Kzo9I GATC 1 cut(s) 29
LpnPI CCDG 2 cut(s) 26, 111
MaeI CTAG 1 cut(s) 158
MalI GATC 1 cut(s) 31
MboI GATC 1 cut(s) 29
MboII GAAGA 1 cut(s) 113
MluCI AATT 1 cut(s) 86
MlyI GAGTC 1 cut(s) 163
MnlI CCTC 2 cut(s) 106, 133
MroXI GAANNNNTTC 1 cut(s) 66
NdeII GATC 1 cut(s) 29
NlaIII CATG 1 cut(s) 134
PdmI GAANNNNTTC 1 cut(s) 66
PleI GAGTC 1 cut(s) 162
PpsI GAGTC 1 cut(s) 162
Sau3AI GATC 1 cut(s) 29
SchI GAGTC 1 cut(s) 163
SgeI CNNG 8 cut(s) 25, 45, 110, 143, 152, 160, 165, 170
Sse9I AATT 1 cut(s) 86
SspMI CTAG 1 cut(s) 158
TaaI ACNGT 1 cut(s) 67
TaqI TCGA 1 cut(s) 152
TasI AATT 1 cut(s) 86
TspDTI ATGAA 1 cut(s) 59
XmnI GAANNNNTTC 1 cut(s) 66
XspI CTAG 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.