Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002043

Physical Location & Seq

Genomic Coordinates Forward (+)

10895628 .. 10899385

Gene Structure 3758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006832

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGGCCCTTGTACCTCATAATCGGGCCCCCAACACCATTCGTAGAGGAGACAATTATCGTCCTCCTCTGCCTAGTAGAGATGGCCGTCGTCAATTTGAAACAGATGACAGTTCATTGATCAGCCAAGTTCTGTTCATCGATGAATCTCATGATGACCGTCCCTATGATCCTACTCCTATTTCTTTGAAACATATTCTACAAGCCGCAGAGATTATTCTTTCCCATGTCAACTCCCCTGATATCCATTCCAATGTTTCGGGATCAGCAGTAACTGCAGATGCACATGAGGATGCCTTGGAACATCATGCGAGCCCAAGTACCCTCCATGAAAGCTACGGTGTTCCAAGCAGCATCTTTATTGCAATTTCCTGCAAGTTATTTACAAAAAAATGGCTGACCGGGGAAGATGACAACAAGAAAAATATAGCCCTGGGTATTTTATATGCCGTCCACCAGTACGATTGGCAAGAAAAGGTGGTACTTGTCTTGGGAACTTTTGCTGTGAAAAATGGTGAGTTTTGGCTTGTGGCTCAGCTTTACAGCACCTATGCGCTCGCCAAAGAGATCGGAAAACTCGAGCAATTACCAGAGTTATTGGAGCGTGCAGAGACTGATTTGAAGTCGAAATTTGAAGCATACAACAACCTTGTTAAAGCCGTGCTCAGAGTGACCAAGCTCATTATTCGGTTACAGGAGCTTCGCTGTGATCCTTACTCAACCACCGAGCTAGAATCTACAACTAATTCAACTGATGTTTATATTGCCACTGCTGTTTACTGGACAATTTGGAGTCTAGTAGCTGCTGCATCACATTTTGTAGGGATCACAGGCATGGGTCCGGACTACAAAATGGAAGAATGGGAACTATCATTTTCGATCCAAAAGCTCGAAAGTATACACAGCGACCTTGAGGAGACCATCAACAGTTTATTTGATGCCATCCAGAGGAAGAAAGATGATGAAGCTTTAGCTGCAATTGCATACATTTTAGAAAACCCACATGTTGACAACATGAAGCCTTTAAAGGTTTTGTTTTTCAAAGATGACCAGCCAGCACTCTATGATTGCTACAGAAAAAGAAGGGTGAGTATTGGTCTGTTGAAGGGGAAGGTTGTAATACTGTTCCTTACAGACCTAAACATCCTCCATGAAAACGAGTACATGATCGTCCAACAAATGTACGTGGAAAAACGCCACGAGCCAATGAAGCCGGAGAGCCAATACGAGGTTGTGTGGGTTCCGATTGTGGACACATGGACCGAAGACAAATACGAACAGTTCGAGAGGATTAGAAATTGTATGGAATGGTACTCGGTTTACCTCCCTTCCGTAGTTTCGCCGAATGTGATCAGGTACATCCGAAAGGAGGATAAATGGAACTTTGTGAAGAAGCCTTTGCTTGTGGTGATGGACCCTCAAGGTAAAATAGTGCACACCAATGCTGTACACATGATGTGTGTTTTTGGAAGCATAGCATTTCCATTCAATAAAAACAGGGAGGAAGTGCTCTGGGAAGAGGAGACCTGGAGAATTGAACTTGTGGCAGACTCCATCGATGAGAACTTAATTTCTTGGATCACCGAAAGGAAATACATTTGCTTGTACGGTGGAGAAGACATAAAATGGATCCGGAGTTTCACAAGGGCGGCAAGAAGTGTGGCTTGGGAAGCTGGAATCCGGTTGGAATTGCTTTACGTGGGCAAGAGGAAGGCTACGGAGAAAGTGGTGAAGAACATAATGAGAATCATTCAAGACGAGAATCTAAGCCACACGATCGAGTGGCAATTCATTTCGTTGTTCTGGACTCGTCTAGAAAGTATGTGGGAATCCAAAGGACATCAACTCCAGAACAAGATTAAGAAATCAAGTCAACTTGGGACGACCGATTATGTTGCTATGAAAAACGACGATGCCGTAATGCAAGGGATTATATCAATGCTGACTTTTGGTTCCAGTGACCACGGGTGGGCGCTGATTGGGACCGGTTCGGCGGAGATGTCTAAGGCAAACGGGGAGCATATGTTGAGGAGCTTGAGGGAGTTTAATGCGTGGAAGACAAGGCACAGTGAGTTAGGGTTTACGCCTGCACTGAATGAATACCTTGCTGGGGTGTCTAAGCAGGCCCCACATCACTGCTCCAGTTTGATGTTGCCTGTCATCGGAGTCATGCCGGAGACGGTGGCCTGCTCTGAATGTGGACGTATCATGGAGAGGTTCAACATGTTCCGCTGCTGTACTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0008150 GO:0009888 GO:0010087 GO:0010088 GO:0032502 GO:0042802 GO:0042803 GO:0043621 GO:0046983 GO:0048856

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SEO_C SEO_N

Protein Analysis

748

Amino Acids

85.9

Weight (kDa)

5.84

Isoelectric Point (pI)

41.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SEO_N	PF14576	35 - 334	1.4e-52	Sieve element occlusion N-terminus
SEO_C	PF14577	499 - 746	4.1e-78	Sieve element occlusion C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002043)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25290 FvH4_4g25290 FvH4_4g25290 FvH4_4g25310 FvH4_4g25320
malus_domestica	MD13G1105000.v1.1 MD13G1105100.v1.1 MD16G1104800.v1.1 MD16G1105000.v1.1
prunus_persica	Prupe.1G241400_v2.0.a1 Prupe.1G241500_v2.0.a1
pyrus_communis	pycom13g09110 pycom13g09120 pycom16g08950 pycom16g08960
rosa_chinensis	RchiOBHm_Chr4g0432561 RchiOBHm_Chr4g0432571 RchiOBHm_Chr4g0432611
rosa_laevigata	RLG00000006831 RLG00000006832 RLG00000006833
rosa_multiflora	Rmu_sc0003886.1_g000001 Rmu_sc0004612.1_g000014 Rmu_sc0027699.1_g000001
rosa_roxburghii	Rroxscaffold_5G00373990 Rroxscaffold_5G00374000 Rroxscaffold_5G00374030
rosa_rugosa	Rorug04G0260100 Rorug04G0260100 Rorug04G0260200
rosa_samantha	Rh4AG315100 Rh4AG315200 Rh4AG315300 Rh4BG322800 Rh4BG322900 Rh4BG323000 Rh4CG337900 Rh4CG338000 Rh4CG338100 Rh4DG318600 Rh4DG318700 Rh4DG318800
rosa_wichuraiana	Rw4G027380 Rw4G027390 Rw4G027420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	895
AccIII	TCCGGA	2 cut(s)	838, 1629
AciI	CCGC	4 cut(s)	204, 1646, 1991, 2227
AclWI	GGATC	8 cut(s)	161, 268, 701, 830, 871, 1583, 1621, 1634
AcoI	YGGCCR	1 cut(s)	82
AcsI	RAATTY	1 cut(s)	626
AfiI	CCNNNNNNNGG	6 cut(s)	945, 1225, 1366, 1966, 2107, 2159
AflIII	ACRYGT	2 cut(s)	1000, 2220
AgeI	ACCGGT	1 cut(s)	1982
AjnI	CCWGG	2 cut(s)	429, 1523
AjuI	GAANNNNNNNTTGG	2 cut(s)	1645, 1677
Alw21I	GWGCWC	3 cut(s)	663, 1434, 1509
Alw26I	GTCTC	5 cut(s)	42, 602, 908, 1514, 2168
Alw44I	GTGCAC	1 cut(s)	1430
AlwI	GGATC	8 cut(s)	161, 268, 701, 830, 871, 1583, 1621, 1634
AlwNI	CAGNNNCTG	2 cut(s)	272, 611
Ama87I	CYCGRG	1 cut(s)	575
Aor13HI	TCCGGA	2 cut(s)	838, 1629
AoxI	GGCC	5 cut(s)	3, 24, 82, 2121, 2181
ApaI	GGGCCC	1 cut(s)	28
ApaLI	GTGCAC	1 cut(s)	1430
ApeKI	GCWGC	5 cut(s)	348, 800, 803, 971, 2229
ApoI	RAATTY	1 cut(s)	626
AsiGI	ACCGGT	1 cut(s)	1982
AspLEI	GCGC	2 cut(s)	553, 1972
AspS9I	GGNCC	8 cut(s)	4, 24, 25, 836, 1257, 1411, 1980, 2122
AsuC2I	CCSGG	1 cut(s)	400
AsuHPI	GGTGA	5 cut(s)	524, 1096, 1417, 1570, 1738
AvaI	CYCGRG	1 cut(s)	575
AvaII	GGWCC	4 cut(s)	836, 1257, 1411, 1980
BaeGI	GKGCMC	2 cut(s)	28, 1434
BamHI	GGATCC	1 cut(s)	1626
BanII	GRGCYC	2 cut(s)	28, 314
BauI	CACGAG	1 cut(s)	1196
BbsI	GAAGAC	3 cut(s)	1269, 1620, 2060
Bbv12I	GWGCWC	3 cut(s)	663, 1434, 1509
BbvI	GCAGC	5 cut(s)	360, 787, 790, 958, 2216
BccI	CCATC	5 cut(s)	74, 926, 947, 1402, 1559
BceAI	ACGGC	4 cut(s)	69, 431, 641, 1898
BcgI	CGANNNNNNTGC	2 cut(s)	1874, 1908
BciT130I	CCWGG	2 cut(s)	431, 1525
BclI	TGATCA	2 cut(s)	117, 1347
BcnI	CCSGG	1 cut(s)	400
BcoDI	GTCTC	5 cut(s)	42, 602, 908, 1514, 2168
BfaI	CTAG	4 cut(s)	72, 728, 794, 1811
BfmI	CTRYAG	2 cut(s)	273, 1069
BfoI	RGCGCY	1 cut(s)	1973
BisI	GCNGC	7 cut(s)	204, 349, 801, 804, 972, 1647, 2230
BlpI	GCTNAGC	1 cut(s)	531
BlsI	GCNGC	7 cut(s)	205, 350, 802, 805, 973, 1648, 2231
Bme1390I	CCNGG	3 cut(s)	400, 431, 1525
Bme18I	GGWCC	4 cut(s)	836, 1257, 1411, 1980
BmeT110I	CYCGRG	1 cut(s)	575
BmgT120I	GGNCC	8 cut(s)	4, 24, 25, 836, 1257, 1411, 1980, 2122
BmiI	GGNNCC	9 cut(s)	26, 27, 837, 1239, 1413, 1628, 1951, 1981, 2124
BmrFI	CCNGG	3 cut(s)	400, 431, 1525
BmsI	GCATC	6 cut(s)	268, 280, 360, 815, 925, 1900
BpiI	GAAGAC	3 cut(s)	1269, 1620, 2060
BpmI	CTGGAG	3 cut(s)	1546, 1829, 2122
Bpu1102I	GCTNAGC	1 cut(s)	531
BpuEI	CTTGAG	3 cut(s)	929, 1401, 2053
BpuMI	CCSGG	1 cut(s)	400
Bsa29I	ATCGAT	2 cut(s)	138, 1554
BsaAI	YACGTR	2 cut(s)	1183, 1696
BsaI	GGTCTC	2 cut(s)	908, 1514
BsaJI	CCNNGG	5 cut(s)	294, 399, 429, 430, 1960
BsaWI	WCCGGW	4 cut(s)	838, 1629, 1677, 1982
BsaXI	ACNNNNNCTCC	4 cut(s)	1827, 1857, 2006, 2036
Bsc4I	CCNNNNNNNGG	6 cut(s)	945, 1225, 1366, 1966, 2107, 2159
Bse118I	RCCGGY	1 cut(s)	1982
Bse1I	ACTGG	4 cut(s)	454, 782, 1953, 2139
BseAI	TCCGGA	2 cut(s)	838, 1629
BseBI	CCWGG	2 cut(s)	431, 1525
BseCI	ATCGAT	2 cut(s)	138, 1554
BseDI	CCNNGG	5 cut(s)	294, 399, 429, 430, 1960
BseGI	GGATG	4 cut(s)	295, 939, 1140, 1356
BseLI	CCNNNNNNNGG	6 cut(s)	945, 1225, 1366, 1966, 2107, 2159
BseMII	CTCAG	2 cut(s)	545, 676
BseNI	ACTGG	4 cut(s)	454, 782, 1953, 2139
BseRI	GAGGAG	5 cut(s)	54, 60, 926, 1532, 2041
BseSI	GKGCMC	2 cut(s)	28, 1434
BseXI	GCAGC	5 cut(s)	360, 787, 790, 958, 2216
BseYI	CCCAGC	1 cut(s)	2105
BsgI	GTGCAG	2 cut(s)	624, 2070
Bsh1285I	CGRYCG	2 cut(s)	1776, 1884
BshFI	GGCC	5 cut(s)	5, 26, 84, 2123, 2183
BshTI	ACCGGT	1 cut(s)	1982
BshVI	ATCGAT	2 cut(s)	138, 1554
BsiEI	CGRYCG	2 cut(s)	1776, 1884
BsiHKAI	GWGCWC	3 cut(s)	663, 1434, 1509
BsiHKCI	CYCGRG	1 cut(s)	575
BsiSI	CCGG	7 cut(s)	399, 839, 1211, 1630, 1678, 1983, 2171
BslFI	GGGAC	3 cut(s)	144, 1891, 1993
BslI	CCNNNNNNNGG	6 cut(s)	945, 1225, 1366, 1966, 2107, 2159
BsmAI	GTCTC	5 cut(s)	42, 602, 908, 1514, 2168
BsmBI	CGTCTC	1 cut(s)	2168
BsmFI	GGGAC	3 cut(s)	144, 1891, 1993
BsnI	GGCC	5 cut(s)	5, 26, 84, 2123, 2183
Bso31I	GGTCTC	2 cut(s)	908, 1514
BsoBI	CYCGRG	1 cut(s)	575
Bsp120I	GGGCCC	1 cut(s)	24
Bsp1286I	GDGCHC	5 cut(s)	28, 314, 663, 1434, 1509
Bsp13I	TCCGGA	2 cut(s)	838, 1629
Bsp1407I	TGTACA	1 cut(s)	1444
Bsp1720I	GCTNAGC	1 cut(s)	531
BspACI	CCGC	4 cut(s)	204, 1646, 1991, 2227
BspANI	GGCC	5 cut(s)	5, 26, 84, 2123, 2183
BspCNI	CTCAG	2 cut(s)	544, 675
BspDI	ATCGAT	2 cut(s)	138, 1554
BspEI	TCCGGA	2 cut(s)	838, 1629
BspHI	TCATGA	1 cut(s)	148
BspLI	GGNNCC	9 cut(s)	26, 27, 837, 1239, 1413, 1628, 1951, 1981, 2124
BspMAI	CTGCAG	1 cut(s)	277
BspPI	GGATC	8 cut(s)	161, 268, 701, 830, 871, 1583, 1621, 1634
BspTNI	GGTCTC	2 cut(s)	908, 1514
BsrFI	RCCGGY	1 cut(s)	1982
BsrGI	TGTACA	1 cut(s)	1444
BsrI	ACTGG	4 cut(s)	454, 782, 1953, 2139
BssAI	RCCGGY	1 cut(s)	1982
BssECI	CCNNGG	5 cut(s)	294, 399, 429, 430, 1960
BssNAI	GTATAC	1 cut(s)	896
BssSI	CACGAG	1 cut(s)	1196
BssT1I	CCWWGG	1 cut(s)	294
Bst1107I	GTATAC	1 cut(s)	896
Bst2BI	CACGAG	1 cut(s)	1196
Bst2UI	CCWGG	2 cut(s)	431, 1525
Bst4CI	ACNGT	9 cut(s)	110, 158, 338, 926, 1122, 1278, 1607, 2066, 2179
Bst6I	CTCTTC	1 cut(s)	1509
BstAPI	GCANNNNNTGC	1 cut(s)	272
BstAUI	TGTACA	1 cut(s)	1444
BstBAI	YACGTR	2 cut(s)	1183, 1696
BstC8I	GCNNGC	7 cut(s)	310, 555, 603, 1053, 2085, 2121, 2185
BstDEI	CTNAG	5 cut(s)	531, 662, 1763, 2001, 2115
BstDSI	CCRYGG	1 cut(s)	1960
BstF5I	GGATG	4 cut(s)	295, 939, 1140, 1356
BstH2I	RGCGCY	1 cut(s)	1973
BstHHI	GCGC	2 cut(s)	553, 1972
BstMAI	GTCTC	5 cut(s)	42, 602, 908, 1514, 2168
BstMCI	CGRYCG	2 cut(s)	1776, 1884
BstMWI	GCNNNNNNNGC	5 cut(s)	272, 971, 977, 1207, 1667
BstNI	CCWGG	2 cut(s)	431, 1525
BstNSI	RCATGY	2 cut(s)	1004, 2224
BstSCI	CCNGG	3 cut(s)	398, 429, 1523
BstSFI	CTRYAG	2 cut(s)	273, 1069
BstSLI	GKGCMC	2 cut(s)	28, 1434
BstV1I	GCAGC	5 cut(s)	360, 787, 790, 958, 2216
BstV2I	GAAGAC	3 cut(s)	1269, 1620, 2060
BstX2I	RGATCY	1 cut(s)	1626
BstYI	RGATCY	1 cut(s)	1626
BstZ17I	GTATAC	1 cut(s)	896
Bsu15I	ATCGAT	2 cut(s)	138, 1554
BsuRI	GGCC	5 cut(s)	5, 26, 84, 2123, 2183
BsuTUI	ATCGAT	2 cut(s)	138, 1554
BtgI	CCRYGG	1 cut(s)	1960
BtsCI	GGATG	4 cut(s)	295, 939, 1140, 1356
BtsI	GCAGTG	2 cut(s)	765, 2131
BtsIMutI	CAGTG	5 cut(s)	765, 1960, 2071, 2087, 2131
Cac8I	GCNNGC	7 cut(s)	310, 555, 603, 1053, 2085, 2121, 2185
CaiI	CAGNNNCTG	2 cut(s)	272, 611
CciI	TCATGA	1 cut(s)	148
CfoI	GCGC	2 cut(s)	553, 1972
Cfr10I	RCCGGY	1 cut(s)	1982
Cfr13I	GGNCC	8 cut(s)	4, 24, 25, 836, 1257, 1411, 1980, 2122
ClaI	ATCGAT	2 cut(s)	138, 1554
CspAI	ACCGGT	1 cut(s)	1982
CspCI	CAANNNNNGTGG	2 cut(s)	1638, 1673
DdeI	CTNAG	5 cut(s)	531, 662, 1763, 2001, 2115
DraI	TTTAAA	1 cut(s)	1023
EaeI	YGGCCR	1 cut(s)	82
Eam1104I	CTCTTC	1 cut(s)	1509
EarI	CTCTTC	1 cut(s)	1509
EciI	GGCGGA	1 cut(s)	2006
Eco130I	CCWWGG	1 cut(s)	294
Eco24I	GRGCYC	2 cut(s)	28, 314
Eco31I	GGTCTC	2 cut(s)	908, 1514
Eco32I	GATATC	1 cut(s)	241
Eco47I	GGWCC	4 cut(s)	836, 1257, 1411, 1980
Eco88I	CYCGRG	1 cut(s)	575
EcoO109I	RGGNCCY	2 cut(s)	25, 2122
EcoRII	CCWGG	2 cut(s)	429, 1523
EcoRV	GATATC	1 cut(s)	241
EcoT14I	CCWWGG	1 cut(s)	294
EcoT38I	GRGCYC	2 cut(s)	28, 314
ErhI	CCWWGG	1 cut(s)	294
Esp3I	CGTCTC	1 cut(s)	2168
FalI	AAGNNNNNCTT	2 cut(s)	1645, 1677
FaqI	GGGAC	3 cut(s)	144, 1891, 1993
FauNDI	CATATG	1 cut(s)	2019
FbaI	TGATCA	2 cut(s)	117, 1347
FblI	GTMKAC	1 cut(s)	895
Fnu4HI	GCNGC	7 cut(s)	204, 349, 801, 804, 972, 1647, 2230
FokI	GGATG	4 cut(s)	302, 926, 1127, 1343
FriOI	GRGCYC	2 cut(s)	28, 314
Fsp4HI	GCNGC	7 cut(s)	204, 349, 801, 804, 972, 1647, 2230
FspBI	CTAG	4 cut(s)	72, 728, 794, 1811
GlaI	GCGC	2 cut(s)	552, 1971
GluI	GCNGC	7 cut(s)	204, 349, 801, 804, 972, 1647, 2230
GsaI	CCCAGC	1 cut(s)	2109
GsuI	CTGGAG	3 cut(s)	1546, 1829, 2122
HaeII	RGCGCY	1 cut(s)	1973
HaeIII	GGCC	5 cut(s)	5, 26, 84, 2123, 2183
HapII	CCGG	7 cut(s)	399, 839, 1211, 1630, 1678, 1983, 2171
HhaI	GCGC	2 cut(s)	553, 1972
Hin6I	GCGC	2 cut(s)	551, 1970
HinP1I	GCGC	2 cut(s)	551, 1970
HincII	GTYRAC	3 cut(s)	229, 1006, 1871
HindII	GTYRAC	3 cut(s)	229, 1006, 1871
HindIII	AAGCTT	1 cut(s)	963
HpaII	CCGG	7 cut(s)	399, 839, 1211, 1630, 1678, 1983, 2171
HphI	GGTGA	5 cut(s)	524, 1096, 1417, 1570, 1738
Hpy188I	TCNGA	6 cut(s)	569, 665, 1242, 1361, 2162, 2191
Hpy99I	CGWCG	2 cut(s)	90, 1910
HpyAV	CCTTC	5 cut(s)	1074, 1096, 1102, 1335, 1702
HpyCH4III	ACNGT	9 cut(s)	110, 158, 338, 926, 1122, 1278, 1607, 2066, 2179
HpyCH4IV	ACGT	3 cut(s)	1182, 1695, 2200
HpyF10VI	GCNNNNNNNGC	5 cut(s)	272, 971, 977, 1207, 1667
HpyF3I	CTNAG	5 cut(s)	531, 662, 1763, 2001, 2115
HpySE526I	ACGT	3 cut(s)	1182, 1695, 2200
HspAI	GCGC	2 cut(s)	551, 1970
Kpn2I	TCCGGA	2 cut(s)	838, 1629
Ksp22I	TGATCA	2 cut(s)	117, 1347
LmnI	GCTCC	5 cut(s)	598, 694, 2014, 2028, 2141
Lsp1109I	GCAGC	5 cut(s)	360, 787, 790, 958, 2216
LweI	GCATC	6 cut(s)	268, 280, 360, 815, 925, 1900
MaeI	CTAG	4 cut(s)	72, 728, 794, 1811
MaeII	ACGT	3 cut(s)	1182, 1695, 2200
MaeIII	GTNAC	4 cut(s)	268, 667, 687, 1955
MboII	GAAGA	9 cut(s)	416, 866, 961, 1274, 1399, 1526, 1625, 1741, 2065
MfeI	CAATTG	1 cut(s)	975
MflI	RGATCY	1 cut(s)	1626
MhlI	GDGCHC	5 cut(s)	28, 314, 663, 1434, 1509
MlyI	GAGTC	4 cut(s)	799, 1541, 1798, 2172
MmeI	TCCRAC	2 cut(s)	1195, 1662
MroI	TCCGGA	2 cut(s)	838, 1629
MseI	TTAA	5 cut(s)	651, 1022, 1565, 1857, 2043
MslI	CAYNNNNRTG	4 cut(s)	249, 288, 830, 1437
MspA1I	CMGCKG	1 cut(s)	2229
MspI	CCGG	7 cut(s)	399, 839, 1211, 1630, 1678, 1983, 2171
MspR9I	CCNGG	3 cut(s)	400, 431, 1525
MunI	CAATTG	1 cut(s)	975
MvaI	CCWGG	2 cut(s)	431, 1525
MwoI	GCNNNNNNNGC	5 cut(s)	272, 971, 977, 1207, 1667
NciI	CCSGG	1 cut(s)	400
NdeI	CATATG	1 cut(s)	2019
NlaIV	GGNNCC	9 cut(s)	26, 27, 837, 1239, 1413, 1628, 1951, 1981, 2124
NmuCI	GTSAC	2 cut(s)	667, 1955
NspI	RCATGY	2 cut(s)	1004, 2224
PaeR7I	CTCGAG	1 cut(s)	575
PagI	TCATGA	1 cut(s)	148
PasI	CCCWGGG	1 cut(s)	430
PciI	ACATGT	2 cut(s)	1000, 2220
PcsI	WCGNNNNNNNCGW	3 cut(s)	573, 1278, 1911
PfeI	GAWTC	6 cut(s)	143, 731, 1674, 1743, 1759, 1826
PinAI	ACCGGT	1 cut(s)	1982
PkrI	GCNGC	7 cut(s)	205, 350, 802, 805, 973, 1648, 2231
Ple19I	CGATCG	1 cut(s)	1776
PleI	GAGTC	4 cut(s)	798, 1541, 1798, 2171
PpsI	GAGTC	4 cut(s)	798, 1541, 1798, 2171
Ppu21I	YACGTR	2 cut(s)	1183, 1696
PscI	ACATGT	2 cut(s)	1000, 2220
Psp6I	CCWGG	2 cut(s)	429, 1523
PspFI	CCCAGC	1 cut(s)	2105
PspGI	CCWGG	2 cut(s)	429, 1523
PspN4I	GGNNCC	9 cut(s)	26, 27, 837, 1239, 1413, 1628, 1951, 1981, 2124
PspOMI	GGGCCC	1 cut(s)	24
PspPI	GGNCC	8 cut(s)	4, 24, 25, 836, 1257, 1411, 1980, 2122
PspXI	VCTCGAGB	1 cut(s)	575
PstI	CTGCAG	1 cut(s)	277
PstNI	CAGNNNCTG	2 cut(s)	272, 611
PsuI	RGATCY	1 cut(s)	1626
PvuI	CGATCG	1 cut(s)	1776
RseI	CAYNNNNRTG	4 cut(s)	249, 288, 830, 1437
SaqAI	TTAA	5 cut(s)	651, 1022, 1565, 1857, 2043
SatI	GCNGC	7 cut(s)	204, 349, 801, 804, 972, 1647, 2230
Sau96I	GGNCC	8 cut(s)	4, 24, 25, 836, 1257, 1411, 1980, 2122
SchI	GAGTC	4 cut(s)	799, 1541, 1798, 2172
ScrFI	CCNGG	3 cut(s)	400, 431, 1525
SduI	GDGCHC	5 cut(s)	28, 314, 663, 1434, 1509
SfaNI	GCATC	6 cut(s)	268, 280, 360, 815, 925, 1900
SfcI	CTRYAG	2 cut(s)	273, 1069
Sfr274I	CTCGAG	1 cut(s)	575
SinI	GGWCC	4 cut(s)	836, 1257, 1411, 1980
SlaI	CTCGAG	1 cut(s)	575
SmiMI	CAYNNNNRTG	4 cut(s)	249, 288, 830, 1437
SmlI	CTYRAG	4 cut(s)	575, 908, 1416, 2032
SmoI	CTYRAG	4 cut(s)	575, 908, 1416, 2032
SsiI	CCGC	4 cut(s)	204, 1646, 1991, 2227
SspMI	CTAG	4 cut(s)	72, 728, 794, 1811
StyD4I	CCNGG	3 cut(s)	398, 429, 1523
StyI	CCWWGG	1 cut(s)	294
TaaI	ACNGT	9 cut(s)	110, 158, 338, 926, 1122, 1278, 1607, 2066, 2179
TaiI	ACGT	3 cut(s)	1185, 1698, 2203
TaqI	TCGA	8 cut(s)	138, 576, 623, 875, 888, 1281, 1554, 1776
TaqII	GACCGA	2 cut(s)	1274, 1898
TatI	WGTACW	3 cut(s)	1158, 1444, 2234
TauI	GCSGC	2 cut(s)	206, 1649
TfiI	GAWTC	6 cut(s)	143, 731, 1674, 1743, 1759, 1826
Tru1I	TTAA	5 cut(s)	651, 1022, 1565, 1857, 2043
Tru9I	TTAA	5 cut(s)	651, 1022, 1565, 1857, 2043
TscAI	CASTG	5 cut(s)	772, 1960, 2071, 2094, 2138
TseFI	GTSAC	2 cut(s)	667, 1955
TseI	GCWGC	5 cut(s)	348, 800, 803, 971, 2229
Tsp45I	GTSAC	2 cut(s)	667, 1955
TspGWI	ACGGA	2 cut(s)	1318, 1730
TspRI	CASTG	5 cut(s)	772, 1960, 2071, 2094, 2138
VneI	GTGCAC	1 cut(s)	1430
VpaK11BI	GGWCC	4 cut(s)	836, 1257, 1411, 1980
XapI	RAATTY	1 cut(s)	626
XbaI	TCTAGA	1 cut(s)	1810
XceI	RCATGY	2 cut(s)	1004, 2224
XhoI	CTCGAG	1 cut(s)	575
XmiI	GTMKAC	1 cut(s)	895
XspI	CTAG	4 cut(s)	72, 728, 794, 1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.