RLG00000012792

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
22401342 .. 22403505
2164 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012792

Sequence Viewer

Length: 1479 bp
ATGAAGGGCCTTATGTGCCCAGAACCCTATGGTGCCCTGCCAATTATAGGTCACCTCCATCAACTAGGTGGCCGAAACCCACTGTTTCGAACCTTAGCAACAATGGCTGATAAGTATGGTCCAATCTTTACCATATGGCTCGGCAAGAACCGTGCCCTGGTGATCAACAACTACGAAGCTGTCAAGGAATGTTTCACCACAAACGACAGGCTTTTCGCCACAAGACCAATTTCTGCACAGGGAGAGTACCTTGGTTACAATTATGCAGCATTCGGGTTCTCACCCTATGGCACATATTGGCGTGATATGAGAAAGTTGGTTGTGATTGAGTTGCTCTCTAATCGTAGGCTAGAGACTCTGAAACATGTACAAGTCTCTGAGGTTGATGCTTTTGTTAAAGGGTTGTATTCAGTTTGGGAAAACAAAGGACATGATGGTCAAAGCAAGGTGGTGATCAGTGAATGGATTGAGCATCTAACCTTGAACGTGATCACTAGAATTATTGCTGGGAAGAGGTACTTCGGTAAAGAGAGTGATGAACTTGATGAAGAGGAAAAGAGGATTGGGAAGCTTATCAAGGACTTTATGTATGTTTCTGGCAACCCAGTTGTTACTGAGGTAATTGGGCTTCCAAAGTGGATGGATTTCAAGGGGCAATTGAAAACGATGGAGAATATAGGGAGCCAATTAGACTCTTTGATGACAACTTGGGTTGAAGAACATCATACAAAGATGCAGAAGAGAGATTCAAGCAACCAGCAGCAGGACTTCATTAGTGTCCTACTATCTGAGATTCAGGACAGTTCTATGCTTGGTCATACCCGAGATACTATTATCAAGGCAACAGCACTGAATCTCATCCTAGCCGGTTCAGAAACCACATCAATCAGCTTGACATGGACCGTCTCTTTACTATTAAACAACAGGCATATCTTGAAGCTAGCCCAAGAGGAATTAGATCGAACAGTTGGCAGGCACAAATGGGTGGAAGACACTGACATTAAAAACCTGGTTTACCTCCAAGCCATCGTCAAAGAAACATTGCGTCTATACCCACCAGCTCCCCTCTCAGTTCCACATGAAGCAATGGAGGACTGCAAAGTCGGCGGCTTTCACATCCCGAAGGGCACTCTTTTGTTTGTGAATCTGTGGAAGCTTCATAGGAACCCAAGTGTGTGGTCAGACCCTGAAGTGTTTTCCCCAGAAAGATTTCTTACAAGCCAAGCAGGTGTAGACGCTTCAGGTCAACATTTTGAGTTCATTCCCTTTGGGTCTGGGAGAAGAGTTTGCCCAGGTATCACTTTTGCGTTTCAGGTTATACACTTGACGCTGGCAAGGTTGATTCAAGGGTTTGAATTGGCAACTCCATTGGATGAGGCAGTGGATATGACTGAAGGATTGGGGATCACCATACCAAGAGCAACTCCAATGGAAGTTCTCTTGACCCCACGTTTAGCTTCTGAGTTGTATCCACAGTAA

Protein Analysis

493

Amino Acids

55.69

Weight (kDa)

6.33

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 8 - 472 3.3e-100 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1217
AasI GACNNNNNNGTC 2 cut(s) 435, 1100
Acc36I ACCTGC 1 cut(s) 1217
AccB1I GGYRCC 1 cut(s) 32
AccI GTMKAC 1 cut(s) 1233
AciI CCGC 1 cut(s) 1107
AclWI GGATC 1 cut(s) 1412
AcoI YGGCCR 1 cut(s) 70
AcuI CTGAAG 3 cut(s) 1209, 1224, 1413
AfaI GTAC 3 cut(s) 248, 369, 518
AfiI CCNNNNNNNGG 3 cut(s) 47, 157, 763
AflIII ACRYGT 1 cut(s) 364
AgsI TTSAA 8 cut(s) 484, 649, 661, 716, 750, 937, 1346, 1355
AjnI CCWGG 3 cut(s) 156, 1008, 1291
AjuI GAANNNNNNNTTGG 2 cut(s) 546, 578
AluBI AGCT 7 cut(s) 179, 571, 891, 940, 1061, 1156, 1457
AluI AGCT 7 cut(s) 179, 571, 891, 940, 1061, 1156, 1457
Alw26I GTCTC 3 cut(s) 347, 379, 910
AlwI GGATC 1 cut(s) 1412
AlwNI CAGNNNCTG 1 cut(s) 1187
Ama87I CYCGRG 1 cut(s) 822
AoxI GGCC 2 cut(s) 7, 70
ApeKI GCWGC 2 cut(s) 266, 760
ArsI GACNNNNNNTTYG 2 cut(s) 197, 229
Asp700I GAANNNNTTC 1 cut(s) 1209
AspS9I GGNCC 3 cut(s) 7, 119, 900
AsuHPI GGTGA 6 cut(s) 44, 172, 187, 273, 463, 1399
AsuII TTCGAA 1 cut(s) 88
AsuNHI GCTAGC 1 cut(s) 940
AvaI CYCGRG 1 cut(s) 822
AvaII GGWCC 2 cut(s) 119, 900
BaeGI GKGCMC 4 cut(s) 20, 37, 157, 1130
BaeI ACNNNNGTAYC 2 cut(s) 508, 541
BanI GGYRCC 1 cut(s) 32
BarI GAAGNNNNNNTAC 2 cut(s) 612, 644
BbsI GAAGAC 1 cut(s) 996
BbvI GCAGC 2 cut(s) 278, 772
BccI CCATC 5 cut(s) 66, 428, 634, 661, 1034
BciT130I CCWGG 3 cut(s) 158, 1010, 1293
BciVI GTATCC 1 cut(s) 1479
BclI TGATCA 3 cut(s) 162, 453, 489
BcoDI GTCTC 3 cut(s) 347, 379, 910
BfaI CTAG 5 cut(s) 65, 350, 495, 863, 941
BfuAI ACCTGC 1 cut(s) 1217
BfuI GTATCC 1 cut(s) 1479
BisI GCNGC 3 cut(s) 267, 761, 1108
BlsI GCNGC 3 cut(s) 268, 762, 1109
Bme1390I CCNGG 3 cut(s) 158, 1010, 1293
Bme18I GGWCC 2 cut(s) 119, 900
BmeT110I CYCGRG 1 cut(s) 822
BmgT120I GGNCC 3 cut(s) 7, 119, 900
BmiI GGNNCC 3 cut(s) 34, 683, 1166
BmrFI CCNGG 3 cut(s) 158, 1010, 1293
BmrI ACTGGG 1 cut(s) 599
BmsI GCATC 3 cut(s) 376, 481, 723
BmtI GCTAGC 1 cut(s) 944
BmuI ACTGGG 1 cut(s) 599
BpiI GAAGAC 1 cut(s) 996
BplI GAGNNNNNCTC 2 cut(s) 320, 352
Bpu10I CCTNAGC 1 cut(s) 94
Bpu14I TTCGAA 1 cut(s) 88
BsaJI CCNNGG 3 cut(s) 156, 250, 1291
Bsc4I CCNNNNNNNGG 3 cut(s) 47, 157, 763
Bse118I RCCGGY 1 cut(s) 866
Bse1I ACTGG 1 cut(s) 605
Bse3DI GCAATG 2 cut(s) 1040, 1092
BseBI CCWGG 3 cut(s) 158, 1010, 1293
BseDI CCNNGG 3 cut(s) 156, 250, 1291
BseGI GGATG 4 cut(s) 645, 858, 1116, 1378
BseLI CCNNNNNNNGG 3 cut(s) 47, 157, 763
BseMI GCAATG 2 cut(s) 1040, 1092
BseMII CTCAG 5 cut(s) 369, 606, 780, 1083, 1452
BseNI ACTGG 1 cut(s) 605
BseSI GKGCMC 4 cut(s) 20, 37, 157, 1130
BseXI GCAGC 2 cut(s) 278, 772
BseYI CCCAGC 1 cut(s) 506
BsgI GTGCAG 1 cut(s) 219
BshFI GGCC 2 cut(s) 9, 72
BshNI GGYRCC 1 cut(s) 32
BsiHKCI CYCGRG 1 cut(s) 822
BsiSI CCGG 1 cut(s) 867
BslI CCNNNNNNNGG 3 cut(s) 47, 157, 763
BsmAI GTCTC 3 cut(s) 347, 379, 910
BsmBI CGTCTC 1 cut(s) 910
BsmI GAATGC 1 cut(s) 269
BsnI GGCC 2 cut(s) 9, 72
BsoBI CYCGRG 1 cut(s) 822
Bsp119I TTCGAA 1 cut(s) 88
Bsp1286I GDGCHC 4 cut(s) 20, 37, 157, 1130
Bsp1407I TGTACA 1 cut(s) 367
Bsp143I GATC 5 cut(s) 162, 453, 489, 958, 1404
BspACI CCGC 1 cut(s) 1107
BspANI GGCC 2 cut(s) 9, 72
BspCNI CTCAG 5 cut(s) 370, 607, 781, 1082, 1453
BspLI GGNNCC 3 cut(s) 34, 683, 1166
BspMI ACCTGC 1 cut(s) 1217
BspOI GCTAGC 1 cut(s) 944
BspPI GGATC 1 cut(s) 1412
BspT104I TTCGAA 1 cut(s) 88
BspT107I GGYRCC 1 cut(s) 32
BsrDI GCAATG 2 cut(s) 1040, 1092
BsrFI RCCGGY 1 cut(s) 866
BsrGI TGTACA 1 cut(s) 367
BsrI ACTGG 1 cut(s) 605
BssAI RCCGGY 1 cut(s) 866
BssECI CCNNGG 3 cut(s) 156, 250, 1291
BssMI GATC 5 cut(s) 162, 453, 489, 958, 1404
BssT1I CCWWGG 1 cut(s) 250
Bst2UI CCWGG 3 cut(s) 158, 1010, 1293
Bst4CI ACNGT 6 cut(s) 84, 152, 803, 904, 967, 1476
Bst6I CTCTTC 4 cut(s) 506, 543, 734, 1276
BstAUI TGTACA 1 cut(s) 367
BstBI TTCGAA 1 cut(s) 88
BstC8I GCNNGC 3 cut(s) 942, 974, 1332
BstDEI CTNAG 6 cut(s) 94, 378, 615, 789, 1069, 1461
BstEII GGTNACC 1 cut(s) 50
BstF5I GGATG 4 cut(s) 645, 858, 1116, 1378
BstKTI GATC 5 cut(s) 165, 456, 492, 961, 1407
BstMAI GTCTC 3 cut(s) 347, 379, 910
BstMBI GATC 5 cut(s) 162, 453, 489, 958, 1404
BstMWI GCNNNNNNNGC 3 cut(s) 15, 104, 1104
BstNI CCWGG 3 cut(s) 158, 1010, 1293
BstNSI RCATGY 1 cut(s) 368
BstPI GGTNACC 1 cut(s) 50
BstSCI CCNGG 3 cut(s) 156, 1008, 1291
BstSLI GKGCMC 4 cut(s) 20, 37, 157, 1130
BstV1I GCAGC 2 cut(s) 278, 772
BstV2I GAAGAC 1 cut(s) 996
BstXI CCANNNNNNTGG 1 cut(s) 1176
BsuI GTATCC 1 cut(s) 1479
BsuRI GGCC 2 cut(s) 9, 72
BtsCI GGATG 4 cut(s) 645, 858, 1116, 1378
BtsI GCAGTG 1 cut(s) 1386
BtsIMutI CAGTG 5 cut(s) 80, 463, 848, 993, 1386
BveI ACCTGC 1 cut(s) 1217
Cac8I GCNNGC 3 cut(s) 942, 974, 1332
CaiI CAGNNNCTG 1 cut(s) 1187
Cfr10I RCCGGY 1 cut(s) 866
Cfr13I GGNCC 3 cut(s) 7, 119, 900
CseI GACGC 3 cut(s) 1034, 1244, 1336
CsiI ACCWGGT 1 cut(s) 1008
Csp6I GTAC 3 cut(s) 247, 368, 517
CviAII CATG 4 cut(s) 365, 431, 897, 1079
CviQI GTAC 3 cut(s) 247, 368, 517
DdeI CTNAG 6 cut(s) 94, 378, 615, 789, 1069, 1461
DpnI GATC 5 cut(s) 164, 455, 491, 960, 1406
DpnII GATC 5 cut(s) 162, 453, 489, 958, 1404
DrdI GACNNNNNNGTC 2 cut(s) 435, 1100
DseDI GACNNNNNNGTC 2 cut(s) 435, 1100
EaeI YGGCCR 1 cut(s) 70
Eam1104I CTCTTC 4 cut(s) 506, 543, 734, 1276
EarI CTCTTC 4 cut(s) 506, 543, 734, 1276
Eco130I CCWWGG 1 cut(s) 250
Eco47I GGWCC 2 cut(s) 119, 900
Eco57I CTGAAG 3 cut(s) 1209, 1224, 1413
Eco88I CYCGRG 1 cut(s) 822
Eco91I GGTNACC 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 7
EcoO65I GGTNACC 1 cut(s) 50
EcoRII CCWGG 3 cut(s) 156, 1008, 1291
EcoT14I CCWWGG 1 cut(s) 250
ErhI CCWWGG 1 cut(s) 250
Esp3I CGTCTC 1 cut(s) 910
FaeI CATG 4 cut(s) 368, 434, 900, 1082
FalI AAGNNNNNCTT 2 cut(s) 503, 535
FatI CATG 4 cut(s) 364, 430, 896, 1078
FauNDI CATATG 1 cut(s) 134
FbaI TGATCA 3 cut(s) 162, 453, 489
FblI GTMKAC 1 cut(s) 1233
Fnu4HI GCNGC 3 cut(s) 267, 761, 1108
FokI GGATG 4 cut(s) 652, 845, 1103, 1385
Fsp4HI GCNGC 3 cut(s) 267, 761, 1108
FspBI CTAG 5 cut(s) 65, 350, 495, 863, 941
GluI GCNGC 3 cut(s) 267, 761, 1108
GsaI CCCAGC 1 cut(s) 510
HaeIII GGCC 2 cut(s) 9, 72
HapII CCGG 1 cut(s) 867
HgaI GACGC 3 cut(s) 1034, 1244, 1336
Hin1II CATG 4 cut(s) 368, 434, 900, 1082
HincII GTYRAC 1 cut(s) 1247
HindII GTYRAC 1 cut(s) 1247
HindIII AAGCTT 2 cut(s) 569, 1154
HinfI GANTC 7 cut(s) 355, 692, 746, 793, 853, 1144, 1342
HpaII CCGG 1 cut(s) 867
HphI GGTGA 6 cut(s) 44, 172, 187, 273, 463, 1399
Hpy166II GTNNAC 3 cut(s) 1015, 1234, 1247
Hpy188I TCNGA 6 cut(s) 360, 379, 790, 874, 1183, 1462
Hpy188III TCNNGA 4 cut(s) 797, 934, 1120, 1441
Hpy8I GTNNAC 3 cut(s) 1015, 1234, 1247
HpyAV CCTTC 2 cut(s) 1117, 1388
HpyCH4III ACNGT 6 cut(s) 84, 152, 803, 904, 967, 1476
HpyCH4IV ACGT 2 cut(s) 486, 1450
HpyCH4V TGCA 4 cut(s) 236, 266, 736, 1098
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 104, 1104
HpyF3I CTNAG 6 cut(s) 94, 378, 615, 789, 1069, 1461
HpySE526I ACGT 2 cut(s) 486, 1450
Hsp92II CATG 4 cut(s) 368, 434, 900, 1082
Ksp22I TGATCA 3 cut(s) 162, 453, 489
Kzo9I GATC 5 cut(s) 162, 453, 489, 958, 1404
LmnI GCTCC 2 cut(s) 681, 1066
Lsp1109I GCAGC 2 cut(s) 278, 772
LweI GCATC 3 cut(s) 376, 481, 723
MabI ACCWGGT 1 cut(s) 1008
MaeI CTAG 5 cut(s) 65, 350, 495, 863, 941
MaeII ACGT 2 cut(s) 486, 1450
MaeIII GTNAC 3 cut(s) 50, 254, 610
MalI GATC 5 cut(s) 164, 455, 491, 960, 1406
MboI GATC 5 cut(s) 162, 453, 489, 958, 1404
MboII GAAGA 6 cut(s) 523, 560, 728, 751, 1001, 1293
MfeI CAATTG 1 cut(s) 656
MhlI GDGCHC 4 cut(s) 20, 37, 157, 1130
MluCI AATT 9 cut(s) 42, 228, 259, 498, 621, 656, 686, 953, 1355
MlyI GAGTC 2 cut(s) 349, 686
MroXI GAANNNNTTC 1 cut(s) 1209
MseI TTAA 3 cut(s) 396, 917, 1002
MspI CCGG 1 cut(s) 867
MspR9I CCNGG 3 cut(s) 158, 1010, 1293
MunI CAATTG 1 cut(s) 656
Mva1269I GAATGC 1 cut(s) 269
MvaI CCWGG 3 cut(s) 158, 1010, 1293
MwoI GCNNNNNNNGC 3 cut(s) 15, 104, 1104
NdeI CATATG 1 cut(s) 134
NdeII GATC 5 cut(s) 162, 453, 489, 958, 1404
NheI GCTAGC 1 cut(s) 940
NlaIII CATG 4 cut(s) 368, 434, 900, 1082
NlaIV GGNNCC 3 cut(s) 34, 683, 1166
NmeAIII GCCGAG 1 cut(s) 120
NmuCI GTSAC 1 cut(s) 50
NspI RCATGY 1 cut(s) 368
NspV TTCGAA 1 cut(s) 88
PaqCI CACCTGC 1 cut(s) 1217
PciI ACATGT 1 cut(s) 364
PctI GAATGC 1 cut(s) 269
PdmI GAANNNNTTC 1 cut(s) 1209
PfeI GAWTC 5 cut(s) 746, 793, 853, 1144, 1342
PkrI GCNGC 3 cut(s) 268, 762, 1109
PleI GAGTC 2 cut(s) 349, 686
PpsI GAGTC 2 cut(s) 349, 686
PscI ACATGT 1 cut(s) 364
Psp6I CCWGG 3 cut(s) 156, 1008, 1291
PspEI GGTNACC 1 cut(s) 50
PspFI CCCAGC 1 cut(s) 506
PspGI CCWGG 3 cut(s) 156, 1008, 1291
PspN4I GGNNCC 3 cut(s) 34, 683, 1166
PspPI GGNCC 3 cut(s) 7, 119, 900
PstNI CAGNNNCTG 1 cut(s) 1187
RsaI GTAC 3 cut(s) 248, 369, 518
RsaNI GTAC 3 cut(s) 247, 368, 517
SaqAI TTAA 3 cut(s) 396, 917, 1002
SatI GCNGC 3 cut(s) 267, 761, 1108
Sau3AI GATC 5 cut(s) 162, 453, 489, 958, 1404
Sau96I GGNCC 3 cut(s) 7, 119, 900
SchI GAGTC 2 cut(s) 349, 686
ScrFI CCNGG 3 cut(s) 158, 1010, 1293
SduI GDGCHC 4 cut(s) 20, 37, 157, 1130
SexAI ACCWGGT 1 cut(s) 1008
SfaNI GCATC 3 cut(s) 376, 481, 723
SfuI TTCGAA 1 cut(s) 88
SinI GGWCC 2 cut(s) 119, 900
Sse9I AATT 9 cut(s) 42, 228, 259, 498, 621, 656, 686, 953, 1355
SsiI CCGC 1 cut(s) 1107
SspMI CTAG 5 cut(s) 65, 350, 495, 863, 941
StyD4I CCNGG 3 cut(s) 156, 1008, 1291
StyI CCWWGG 1 cut(s) 250
TaaI ACNGT 6 cut(s) 84, 152, 803, 904, 967, 1476
TaiI ACGT 2 cut(s) 489, 1453
TaqI TCGA 2 cut(s) 88, 961
TasI AATT 9 cut(s) 42, 228, 259, 498, 621, 656, 686, 953, 1355
TatI WGTACW 1 cut(s) 367
TauI GCSGC 1 cut(s) 1110
TfiI GAWTC 5 cut(s) 746, 793, 853, 1144, 1342
Tru1I TTAA 3 cut(s) 396, 917, 1002
Tru9I TTAA 3 cut(s) 396, 917, 1002
TscAI CASTG 5 cut(s) 87, 463, 855, 1000, 1386
TseFI GTSAC 1 cut(s) 50
TseI GCWGC 2 cut(s) 266, 760
Tsp45I GTSAC 1 cut(s) 50
TspDTI ATGAA 7 cut(s) 17, 552, 561, 760, 1095, 1148, 1249
TspRI CASTG 5 cut(s) 87, 463, 855, 1000, 1386
VpaK11BI GGWCC 2 cut(s) 119, 900
XceI RCATGY 1 cut(s) 368
XcmI CCANNNNNNNNNTGG 1 cut(s) 65
XmiI GTMKAC 1 cut(s) 1233
XmnI GAANNNNTTC 1 cut(s) 1209
XspI CTAG 5 cut(s) 65, 350, 495, 863, 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.