RLG00000014261

Armadillo repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
50139770 .. 50140513
744 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014261

Sequence Viewer

Length: 312 bp
ATGAAGGTTAAATGTCCTGCATACAAATCCGGCCTGACAAGTATTTTTAAGATTACAAAAAGCTCAATGCATGTGGTGGAACTTTTTCTGGACTGCGTAACAAAACCAAATGAGAAGCTTGTGGAATTTGGGGTAGGTGGGATCTGCAAATGTTGCCCGGTATTTCAGTATTTCTATGCAATTGGGTCACTTTACTATCTTTGCAACGCATCAAACAAGGAAGAGATTATGAAGCCAGAAGTGGTCGATGTCATGAAGAGATATGCTACTGCAGCAAGTGTCAGCTTCAGTAATCTAGCCAAGAAAGGTTAA

Protein Analysis

104

Amino Acids

11.44

Weight (kDa)

9.04

Isoelectric Point (pI)

34.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 149
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 1 cut(s) 271
AluBI AGCT 3 cut(s) 63, 118, 285
AluI AGCT 3 cut(s) 63, 118, 285
AlwI GGATC 1 cut(s) 149
AoxI GGCC 1 cut(s) 31
ApeKI GCWGC 1 cut(s) 272
ApoI RAATTY 1 cut(s) 125
Asp700I GAANNNNTTC 1 cut(s) 84
AsuC2I CCSGG 1 cut(s) 158
BbvI GCAGC 1 cut(s) 284
BcnI CCSGG 1 cut(s) 158
BfaI CTAG 1 cut(s) 296
BfmI CTRYAG 1 cut(s) 270
BisI GCNGC 1 cut(s) 273
BlsI GCNGC 1 cut(s) 274
Bme1390I CCNGG 1 cut(s) 158
BmrFI CCNGG 1 cut(s) 158
BmsI GCATC 1 cut(s) 218
BpuMI CCSGG 1 cut(s) 158
BseXI GCAGC 1 cut(s) 284
BshFI GGCC 1 cut(s) 33
BsiSI CCGG 2 cut(s) 30, 158
BsnI GGCC 1 cut(s) 33
Bsp143I GATC 1 cut(s) 141
BspANI GGCC 1 cut(s) 33
BspHI TCATGA 1 cut(s) 252
BspMAI CTGCAG 1 cut(s) 274
BspPI GGATC 1 cut(s) 149
BssMI GATC 1 cut(s) 141
Bst6I CTCTTC 2 cut(s) 216, 251
BstAPI GCANNNNNTGC 1 cut(s) 153
BstKTI GATC 1 cut(s) 144
BstMBI GATC 1 cut(s) 141
BstMWI GCNNNNNNNGC 2 cut(s) 153, 272
BstNSI RCATGY 1 cut(s) 74
BstSCI CCNGG 1 cut(s) 156
BstSFI CTRYAG 1 cut(s) 270
BstV1I GCAGC 1 cut(s) 284
BstX2I RGATCY 1 cut(s) 141
BstYI RGATCY 1 cut(s) 141
BsuRI GGCC 1 cut(s) 33
CciI TCATGA 1 cut(s) 252
CspCI CAANNNNNGTGG 2 cut(s) 54, 89
CviAII CATG 2 cut(s) 71, 253
CviJI RGCY 6 cut(s) 33, 63, 118, 235, 285, 299
CviKI_1 RGCY 6 cut(s) 33, 63, 118, 235, 285, 299
DpnI GATC 1 cut(s) 143
DpnII GATC 1 cut(s) 141
Eam1104I CTCTTC 2 cut(s) 216, 251
EarI CTCTTC 2 cut(s) 216, 251
Eco57I CTGAAG 1 cut(s) 271
EcoT22I ATGCAT 1 cut(s) 72
FaeI CATG 2 cut(s) 74, 256
FaiI YATR 6 cut(s) 22, 72, 177, 230, 254, 264
FatI CATG 2 cut(s) 70, 252
Fnu4HI GCNGC 1 cut(s) 273
Fsp4HI GCNGC 1 cut(s) 273
FspBI CTAG 1 cut(s) 296
GluI GCNGC 1 cut(s) 273
HaeIII GGCC 1 cut(s) 33
HapII CCGG 2 cut(s) 30, 158
Hin1II CATG 2 cut(s) 74, 256
HindIII AAGCTT 1 cut(s) 116
HpaII CCGG 2 cut(s) 30, 158
Hpy188III TCNNGA 2 cut(s) 89, 253
HpyCH4V TGCA 6 cut(s) 20, 70, 147, 179, 204, 272
HpyF10VI GCNNNNNNNGC 2 cut(s) 153, 272
Hsp92II CATG 2 cut(s) 74, 256
Kzo9I GATC 1 cut(s) 141
LpnPI CCDG 6 cut(s) 30, 43, 47, 74, 171, 249
Lsp1109I GCAGC 1 cut(s) 284
LweI GCATC 1 cut(s) 218
MaeI CTAG 1 cut(s) 296
MaeIII GTNAC 2 cut(s) 97, 186
MalI GATC 1 cut(s) 143
MboI GATC 1 cut(s) 141
MboII GAAGA 2 cut(s) 233, 268
MfeI CAATTG 1 cut(s) 180
MflI RGATCY 1 cut(s) 141
MluCI AATT 2 cut(s) 125, 180
Mph1103I ATGCAT 1 cut(s) 72
MroXI GAANNNNTTC 1 cut(s) 84
MseI TTAA 3 cut(s) 9, 48, 310
MspI CCGG 2 cut(s) 30, 158
MspR9I CCNGG 1 cut(s) 158
MunI CAATTG 1 cut(s) 180
MwoI GCNNNNNNNGC 2 cut(s) 153, 272
NciI CCSGG 1 cut(s) 158
NdeII GATC 1 cut(s) 141
NlaIII CATG 2 cut(s) 74, 256
NmuCI GTSAC 1 cut(s) 186
NsiI ATGCAT 1 cut(s) 72
NspI RCATGY 1 cut(s) 74
PagI TCATGA 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 84
PkrI GCNGC 1 cut(s) 274
PstI CTGCAG 1 cut(s) 274
PsuI RGATCY 1 cut(s) 141
SaqAI TTAA 3 cut(s) 9, 48, 310
SatI GCNGC 1 cut(s) 273
Sau3AI GATC 1 cut(s) 141
ScrFI CCNGG 1 cut(s) 158
SetI ASST 6 cut(s) 9, 65, 120, 139, 287, 310
SfaNI GCATC 1 cut(s) 218
SfcI CTRYAG 1 cut(s) 270
Sse9I AATT 2 cut(s) 125, 180
SspMI CTAG 1 cut(s) 296
StyD4I CCNGG 1 cut(s) 156
TaqI TCGA 1 cut(s) 246
TasI AATT 2 cut(s) 125, 180
Tru1I TTAA 3 cut(s) 9, 48, 310
Tru9I TTAA 3 cut(s) 9, 48, 310
TseFI GTSAC 1 cut(s) 186
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 1 cut(s) 186
TspDTI ATGAA 3 cut(s) 17, 245, 269
XapI RAATTY 1 cut(s) 125
XceI RCATGY 1 cut(s) 74
XmnI GAANNNNTTC 1 cut(s) 84
XspI CTAG 1 cut(s) 296
Zsp2I ATGCAT 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.