trafficking protein particle complex
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65950 |
| fragaria_vesca | FvH4_1g10000 |
| malus_domestica | MD15G1228100.v1.1 |
| prunus_persica | Prupe.7G186800_v2.0.a1 Prupe.7G186800_v2.0.a1 |
| pyrus_communis | pycom15g20290 |
| rosa_chinensis | RchiOBHm_Chr2g0096791 |
| rosa_laevigata | RLG00000016670 RLG00000023097 |
| rosa_multiflora | Rmu_co8505723.1_g000001 Rmu_sc0004938.1_g000018 Rmu_ssc0000215.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00145310 |
| rosa_rugosa | Rorug02G0060900 |
| rosa_samantha | Rh2AG108200 Rh2BG110400 Rh2CG112300 Rh2DG111700 |
| rosa_wichuraiana | Rw2G008370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 609 |
| Acc16I | TGCGCA | 1 cut(s) | 1640 |
| Acc36I | ACCTGC | 3 cut(s) | 599, 743, 3807 |
| Acc65I | GGTACC | 1 cut(s) | 3819 |
| AccB1I | GGYRCC | 4 cut(s) | 2215, 2792, 3819, 3931 |
| AccBSI | CCGCTC | 1 cut(s) | 1244 |
| AccI | GTMKAC | 3 cut(s) | 504, 638, 964 |
| AccII | CGCG | 2 cut(s) | 1272, 1407 |
| AcoI | YGGCCR | 3 cut(s) | 283, 1408, 2433 |
| AcsI | RAATTY | 9 cut(s) | 660, 1260, 2588, 3233, 3582, 4084, 4132, 4284, 4320 |
| AflII | CTTAAG | 1 cut(s) | 1553 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 1020, 3033, 3637 |
| AjnI | CCWGG | 8 cut(s) | 107, 372, 415, 664, 772, 2884, 4039, 4326 |
| Alw21I | GWGCWC | 3 cut(s) | 1371, 3750, 4401 |
| Alw44I | GTGCAC | 1 cut(s) | 3746 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 49, 2069, 3854 |
| Ama87I | CYCGRG | 5 cut(s) | 164, 344, 452, 583, 1364 |
| ApaLI | GTGCAC | 1 cut(s) | 3746 |
| ApoI | RAATTY | 9 cut(s) | 660, 1260, 2588, 3233, 3582, 4084, 4132, 4284, 4320 |
| AseI | ATTAAT | 1 cut(s) | 3362 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 89, 2410, 4132, 4305 |
| Asp718I | GGTACC | 1 cut(s) | 3819 |
| AspLEI | GCGC | 3 cut(s) | 367, 1272, 1641 |
| AsuNHI | GCTAGC | 1 cut(s) | 1594 |
| AvaI | CYCGRG | 5 cut(s) | 164, 344, 452, 583, 1364 |
| BaeGI | GKGCMC | 1 cut(s) | 3750 |
| BalI | TGGCCA | 1 cut(s) | 2435 |
| BamHI | GGATCC | 1 cut(s) | 2643 |
| BanI | GGYRCC | 4 cut(s) | 2215, 2792, 3819, 3931 |
| BanII | GRGCYC | 1 cut(s) | 1371 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 292, 324, 4368, 4400 |
| BbsI | GAAGAC | 3 cut(s) | 82, 1013, 3246 |
| Bbv12I | GWGCWC | 3 cut(s) | 1371, 3750, 4401 |
| BceAI | ACGGC | 4 cut(s) | 46, 169, 657, 1292 |
| BciT130I | CCWGG | 8 cut(s) | 109, 374, 417, 666, 774, 2886, 4041, 4328 |
| BciVI | GTATCC | 1 cut(s) | 3556 |
| BclI | TGATCA | 3 cut(s) | 2947, 2991, 3862 |
| BfaI | CTAG | 7 cut(s) | 314, 834, 863, 1595, 1797, 3837, 4143 |
| BfmI | CTRYAG | 5 cut(s) | 523, 750, 2061, 2070, 2451 |
| BfoI | RGCGCY | 1 cut(s) | 368 |
| BfrI | CTTAAG | 1 cut(s) | 1553 |
| BfuAI | ACCTGC | 3 cut(s) | 599, 743, 3807 |
| BfuI | GTATCC | 1 cut(s) | 3556 |
| BglII | AGATCT | 1 cut(s) | 2150 |
| BmcAI | AGTACT | 1 cut(s) | 2600 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 1020, 3033, 3637 |
| BmeT110I | CYCGRG | 5 cut(s) | 164, 344, 452, 583, 1364 |
| BmrI | ACTGGG | 8 cut(s) | 699, 1351, 1735, 1984, 2649, 2756, 3707, 4494 |
| BmtI | GCTAGC | 1 cut(s) | 1598 |
| BmuI | ACTGGG | 8 cut(s) | 699, 1351, 1735, 1984, 2649, 2756, 3707, 4494 |
| BoxI | GACNNNNGTC | 1 cut(s) | 86 |
| BpiI | GAAGAC | 3 cut(s) | 82, 1013, 3246 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1358, 1390 |
| BpmI | CTGGAG | 4 cut(s) | 756, 2039, 3693, 4152 |
| BpuEI | CTTGAG | 2 cut(s) | 1268, 1376 |
| BsaAI | YACGTR | 2 cut(s) | 406, 1772 |
| BsaBI | GATNNNNATC | 4 cut(s) | 882, 3504, 3861, 4200 |
| BsaI | GGTCTC | 5 cut(s) | 107, 1081, 1183, 1345, 4365 |
| BsaWI | WCCGGW | 1 cut(s) | 3096 |
| Bse118I | RCCGGY | 3 cut(s) | 1063, 1535, 1598 |
| Bse3DI | GCAATG | 1 cut(s) | 2490 |
| Bse8I | GATNNNNATC | 4 cut(s) | 882, 3504, 3861, 4200 |
| BseBI | CCWGG | 8 cut(s) | 109, 374, 417, 666, 774, 2886, 4041, 4328 |
| BseGI | GGATG | 9 cut(s) | 1989, 2222, 2522, 2891, 3004, 3220, 3398, 3454, 3487 |
| BseJI | GATNNNNATC | 4 cut(s) | 882, 3504, 3861, 4200 |
| BseMI | GCAATG | 1 cut(s) | 2490 |
| BseMII | CTCAG | 8 cut(s) | 344, 1092, 1562, 2079, 3939, 4068, 4386, 4547 |
| BseRI | GAGGAG | 8 cut(s) | 798, 1175, 1210, 1213, 1216, 1236, 1239, 1318 |
| BseSI | GKGCMC | 1 cut(s) | 3750 |
| BseX3I | CGGCCG | 1 cut(s) | 1408 |
| BseYI | CCCAGC | 1 cut(s) | 2678 |
| BsgI | GTGCAG | 2 cut(s) | 747, 2601 |
| Bsh1236I | CGCG | 2 cut(s) | 1272, 1407 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1411 |
| BshNI | GGYRCC | 4 cut(s) | 2215, 2792, 3819, 3931 |
| BsiEI | CGRYCG | 1 cut(s) | 1411 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1371, 3750, 4401 |
| BsiHKCI | CYCGRG | 5 cut(s) | 164, 344, 452, 583, 1364 |
| BslFI | GGGAC | 9 cut(s) | 83, 586, 911, 1286, 2814, 3180, 3420, 4153, 4406 |
| BsmBI | CGTCTC | 2 cut(s) | 119, 4557 |
| BsmFI | GGGAC | 9 cut(s) | 83, 586, 911, 1286, 2814, 3180, 3420, 4153, 4406 |
| BsmI | GAATGC | 3 cut(s) | 3146, 3281, 3781 |
| Bso31I | GGTCTC | 5 cut(s) | 107, 1081, 1183, 1345, 4365 |
| BsoBI | CYCGRG | 5 cut(s) | 164, 344, 452, 583, 1364 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1371, 3750, 4401 |
| Bsp1407I | TGTACA | 1 cut(s) | 4062 |
| BspCNI | CTCAG | 8 cut(s) | 345, 1091, 1561, 2080, 3938, 4069, 4387, 4546 |
| BspFNI | CGCG | 2 cut(s) | 1272, 1407 |
| BspHI | TCATGA | 2 cut(s) | 874, 2866 |
| BspMAI | CTGCAG | 4 cut(s) | 754, 2065, 2074, 2455 |
| BspMI | ACCTGC | 3 cut(s) | 599, 743, 3807 |
| BspOI | GCTAGC | 1 cut(s) | 1598 |
| BspT107I | GGYRCC | 4 cut(s) | 2215, 2792, 3819, 3931 |
| BspTI | CTTAAG | 1 cut(s) | 1553 |
| BspTNI | GGTCTC | 5 cut(s) | 107, 1081, 1183, 1345, 4365 |
| BsrBI | CCGCTC | 1 cut(s) | 1244 |
| BsrDI | GCAATG | 1 cut(s) | 2490 |
| BsrFI | RCCGGY | 3 cut(s) | 1063, 1535, 1598 |
| BsrGI | TGTACA | 1 cut(s) | 4062 |
| BssAI | RCCGGY | 3 cut(s) | 1063, 1535, 1598 |
| BssNAI | GTATAC | 1 cut(s) | 639 |
| BssT1I | CCWWGG | 6 cut(s) | 1152, 1173, 3264, 3402, 3476, 4255 |
| Bst1107I | GTATAC | 1 cut(s) | 639 |
| Bst2UI | CCWGG | 8 cut(s) | 109, 374, 417, 666, 774, 2886, 4041, 4328 |
| Bst6I | CTCTTC | 5 cut(s) | 1646, 1714, 2141, 2289, 3046 |
| BstAFI | CTTAAG | 1 cut(s) | 1553 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 958, 1564, 2069 |
| BstAUI | TGTACA | 1 cut(s) | 4062 |
| BstBAI | YACGTR | 2 cut(s) | 406, 1772 |
| BstC8I | GCNNGC | 8 cut(s) | 105, 387, 1596, 1600, 2065, 2106, 2685, 3758 |
| BstDSI | CCRYGG | 1 cut(s) | 1405 |
| BstEII | GGTNACC | 2 cut(s) | 3044, 3250 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1172 |
| BstF5I | GGATG | 9 cut(s) | 1989, 2222, 2522, 2891, 3004, 3220, 3398, 3454, 3487 |
| BstFNI | CGCG | 2 cut(s) | 1272, 1407 |
| BstH2I | RGCGCY | 1 cut(s) | 368 |
| BstHHI | GCGC | 3 cut(s) | 367, 1272, 1641 |
| BstMCI | CGRYCG | 1 cut(s) | 1411 |
| BstNI | CCWGG | 8 cut(s) | 109, 374, 417, 666, 774, 2886, 4041, 4328 |
| BstNSI | RCATGY | 2 cut(s) | 956, 1606 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 86 |
| BstPI | GGTNACC | 2 cut(s) | 3044, 3250 |
| BstSFI | CTRYAG | 5 cut(s) | 523, 750, 2061, 2070, 2451 |
| BstSLI | GKGCMC | 1 cut(s) | 3750 |
| BstUI | CGCG | 2 cut(s) | 1272, 1407 |
| BstV2I | GAAGAC | 3 cut(s) | 82, 1013, 3246 |
| BstX2I | RGATCY | 3 cut(s) | 2150, 2643, 3331 |
| BstYI | RGATCY | 3 cut(s) | 2150, 2643, 3331 |
| BstZ17I | GTATAC | 1 cut(s) | 639 |
| BstZI | CGGCCG | 1 cut(s) | 1408 |
| BsuI | GTATCC | 1 cut(s) | 3556 |
| BtgI | CCRYGG | 1 cut(s) | 1405 |
| BtgZI | GCGATG | 1 cut(s) | 3779 |
| BtsCI | GGATG | 9 cut(s) | 1989, 2222, 2522, 2891, 3004, 3220, 3398, 3454, 3487 |
| BtsI | GCAGTG | 1 cut(s) | 2067 |
| BveI | ACCTGC | 3 cut(s) | 599, 743, 3807 |
| Cac8I | GCNNGC | 8 cut(s) | 105, 387, 1596, 1600, 2065, 2106, 2685, 3758 |
| CaiI | CAGNNNCTG | 3 cut(s) | 49, 2069, 3854 |
| CciI | TCATGA | 2 cut(s) | 874, 2866 |
| CfoI | GCGC | 3 cut(s) | 367, 1272, 1641 |
| Cfr10I | RCCGGY | 3 cut(s) | 1063, 1535, 1598 |
| Cfr42I | CCGCGG | 1 cut(s) | 1408 |
| Cfr9I | CCCGGG | 3 cut(s) | 344, 452, 583 |
| CseI | GACGC | 3 cut(s) | 136, 950, 1763 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 685, 720, 2770, 2805 |
| DraI | TTTAAA | 2 cut(s) | 3885, 4020 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 609 |
| DriI | GACNNNNNGTC | 3 cut(s) | 1020, 3033, 3637 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 609 |
| EaeI | YGGCCR | 3 cut(s) | 283, 1408, 2433 |
| EagI | CGGCCG | 1 cut(s) | 1408 |
| Eam1104I | CTCTTC | 5 cut(s) | 1646, 1714, 2141, 2289, 3046 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 1020, 3033, 3637 |
| EarI | CTCTTC | 5 cut(s) | 1646, 1714, 2141, 2289, 3046 |
| EciI | GGCGGA | 4 cut(s) | 122, 1050, 1219, 1904 |
| Ecl136II | GAGCTC | 1 cut(s) | 1369 |
| EclXI | CGGCCG | 1 cut(s) | 1408 |
| Eco130I | CCWWGG | 6 cut(s) | 1152, 1173, 3264, 3402, 3476, 4255 |
| Eco24I | GRGCYC | 1 cut(s) | 1371 |
| Eco31I | GGTCTC | 5 cut(s) | 107, 1081, 1183, 1345, 4365 |
| Eco52I | CGGCCG | 1 cut(s) | 1408 |
| Eco53kI | GAGCTC | 1 cut(s) | 1369 |
| Eco88I | CYCGRG | 5 cut(s) | 164, 344, 452, 583, 1364 |
| Eco91I | GGTNACC | 2 cut(s) | 3044, 3250 |
| EcoICRI | GAGCTC | 1 cut(s) | 1369 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1172 |
| EcoO109I | RGGNCCY | 3 cut(s) | 252, 3268, 4012 |
| EcoO65I | GGTNACC | 2 cut(s) | 3044, 3250 |
| EcoRI | GAATTC | 4 cut(s) | 660, 1260, 4084, 4132 |
| EcoRII | CCWGG | 8 cut(s) | 107, 372, 415, 664, 772, 2884, 4039, 4326 |
| EcoT14I | CCWWGG | 6 cut(s) | 1152, 1173, 3264, 3402, 3476, 4255 |
| EcoT22I | ATGCAT | 2 cut(s) | 2269, 3146 |
| EcoT38I | GRGCYC | 1 cut(s) | 1371 |
| ErhI | CCWWGG | 6 cut(s) | 1152, 1173, 3264, 3402, 3476, 4255 |
| Esp3I | CGTCTC | 2 cut(s) | 119, 4557 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 385, 417, 3190, 3222, 3318, 3350 |
| FaqI | GGGAC | 9 cut(s) | 83, 586, 911, 1286, 2814, 3180, 3420, 4153, 4406 |
| FauI | CCCGC | 4 cut(s) | 1219, 1261, 1312, 4431 |
| FauNDI | CATATG | 2 cut(s) | 487, 1764 |
| FbaI | TGATCA | 3 cut(s) | 2947, 2991, 3862 |
| FblI | GTMKAC | 3 cut(s) | 504, 638, 964 |
| FokI | GGATG | 9 cut(s) | 1996, 2209, 2529, 2878, 3011, 3227, 3385, 3461, 3494 |
| FriOI | GRGCYC | 1 cut(s) | 1371 |
| FspBI | CTAG | 7 cut(s) | 314, 834, 863, 1595, 1797, 3837, 4143 |
| FspI | TGCGCA | 1 cut(s) | 1640 |
| GlaI | GCGC | 3 cut(s) | 366, 1271, 1640 |
| GsaI | CCCAGC | 1 cut(s) | 2682 |
| GsuI | CTGGAG | 4 cut(s) | 756, 2039, 3693, 4152 |
| HaeII | RGCGCY | 1 cut(s) | 368 |
| HgaI | GACGC | 3 cut(s) | 136, 950, 1763 |
| HhaI | GCGC | 3 cut(s) | 367, 1272, 1641 |
| Hin6I | GCGC | 3 cut(s) | 365, 1270, 1639 |
| HinP1I | GCGC | 3 cut(s) | 365, 1270, 1639 |
| HincII | GTYRAC | 4 cut(s) | 81, 580, 1441, 3102 |
| HindII | GTYRAC | 4 cut(s) | 81, 580, 1441, 3102 |
| HindIII | AAGCTT | 4 cut(s) | 1734, 3134, 4094, 4415 |
| HpaI | GTTAAC | 1 cut(s) | 3102 |
| Hpy99I | CGWCG | 9 cut(s) | 79, 98, 972, 1015, 1018, 1026, 1088, 1436, 1439 |
| HpyCH4IV | ACGT | 7 cut(s) | 77, 405, 699, 1526, 1771, 3104, 3510 |
| HpySE526I | ACGT | 7 cut(s) | 77, 405, 699, 1526, 1771, 3104, 3510 |
| HspAI | GCGC | 3 cut(s) | 365, 1270, 1639 |
| KpnI | GGTACC | 1 cut(s) | 3823 |
| KroI | GCCGGC | 1 cut(s) | 1598 |
| KroNI | GCCGGC | 1 cut(s) | 1600 |
| Ksp22I | TGATCA | 3 cut(s) | 2947, 2991, 3862 |
| KspAI | GTTAAC | 1 cut(s) | 3102 |
| KspI | CCGCGG | 1 cut(s) | 1408 |
| MaeI | CTAG | 7 cut(s) | 314, 834, 863, 1595, 1797, 3837, 4143 |
| MaeII | ACGT | 7 cut(s) | 77, 405, 699, 1526, 1771, 3104, 3510 |
| MbiI | CCGCTC | 1 cut(s) | 1244 |
| MfeI | CAATTG | 3 cut(s) | 1847, 3557, 4500 |
| MflI | RGATCY | 3 cut(s) | 2150, 2643, 3331 |
| MhlI | GDGCHC | 3 cut(s) | 1371, 3750, 4401 |
| MlsI | TGGCCA | 1 cut(s) | 2435 |
| MluNI | TGGCCA | 1 cut(s) | 2435 |
| MlyI | GAGTC | 7 cut(s) | 233, 421, 1012, 1066, 1078, 1211, 3626 |
| MmeI | TCCRAC | 6 cut(s) | 76, 720, 821, 1004, 2719, 3284 |
| Mox20I | TGGCCA | 1 cut(s) | 2435 |
| Mph1103I | ATGCAT | 2 cut(s) | 2269, 3146 |
| MroNI | GCCGGC | 1 cut(s) | 1598 |
| MroXI | GAANNNNTTC | 4 cut(s) | 89, 2410, 4132, 4305 |
| MscI | TGGCCA | 1 cut(s) | 2435 |
| MslI | CAYNNNNRTG | 3 cut(s) | 951, 3640, 4005 |
| Msp20I | TGGCCA | 1 cut(s) | 2435 |
| MspA1I | CMGCKG | 4 cut(s) | 49, 1407, 2633, 2678 |
| MspCI | CTTAAG | 1 cut(s) | 1553 |
| MunI | CAATTG | 3 cut(s) | 1847, 3557, 4500 |
| Mva1269I | GAATGC | 3 cut(s) | 3146, 3281, 3781 |
| MvaI | CCWGG | 8 cut(s) | 109, 374, 417, 666, 774, 2886, 4041, 4328 |
| MvnI | CGCG | 2 cut(s) | 1272, 1407 |
| NaeI | GCCGGC | 1 cut(s) | 1600 |
| NdeI | CATATG | 2 cut(s) | 487, 1764 |
| NgoMIV | GCCGGC | 1 cut(s) | 1598 |
| NheI | GCTAGC | 1 cut(s) | 1594 |
| NmeAIII | GCCGAG | 1 cut(s) | 2035 |
| NmuCI | GTSAC | 7 cut(s) | 220, 2521, 2910, 3044, 3394, 4069, 4367 |
| NsbI | TGCGCA | 1 cut(s) | 1640 |
| NsiI | ATGCAT | 2 cut(s) | 2269, 3146 |
| NspI | RCATGY | 2 cut(s) | 956, 1606 |
| PaeR7I | CTCGAG | 2 cut(s) | 164, 1364 |
| PagI | TCATGA | 2 cut(s) | 874, 2866 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 80, 171, 180 |
| PctI | GAATGC | 3 cut(s) | 3146, 3281, 3781 |
| PdiI | GCCGGC | 1 cut(s) | 1600 |
| PdmI | GAANNNNTTC | 4 cut(s) | 89, 2410, 4132, 4305 |
| PfoI | TCCNGGA | 2 cut(s) | 772, 4039 |
| PleI | GAGTC | 7 cut(s) | 233, 420, 1012, 1065, 1077, 1211, 3626 |
| PpsI | GAGTC | 7 cut(s) | 233, 420, 1012, 1065, 1077, 1211, 3626 |
| Ppu21I | YACGTR | 2 cut(s) | 406, 1772 |
| PpuMI | RGGWCCY | 2 cut(s) | 3268, 4012 |
| PshAI | GACNNNNGTC | 1 cut(s) | 86 |
| PshBI | ATTAAT | 1 cut(s) | 3362 |
| Psp124BI | GAGCTC | 1 cut(s) | 1371 |
| Psp5II | RGGWCCY | 2 cut(s) | 3268, 4012 |
| Psp6I | CCWGG | 8 cut(s) | 107, 372, 415, 664, 772, 2884, 4039, 4326 |
| PspEI | GGTNACC | 2 cut(s) | 3044, 3250 |
| PspFI | CCCAGC | 1 cut(s) | 2678 |
| PspGI | CCWGG | 8 cut(s) | 107, 372, 415, 664, 772, 2884, 4039, 4326 |
| PspPPI | RGGWCCY | 2 cut(s) | 3268, 4012 |
| PspXI | VCTCGAGB | 2 cut(s) | 164, 1364 |
| PsrI | GAACNNNNNNTAC | 6 cut(s) | 1570, 1602, 1697, 1729, 4431, 4463 |
| PstI | CTGCAG | 4 cut(s) | 754, 2065, 2074, 2455 |
| PstNI | CAGNNNCTG | 3 cut(s) | 49, 2069, 3854 |
| PsuI | RGATCY | 3 cut(s) | 2150, 2643, 3331 |
| PvuII | CAGCTG | 3 cut(s) | 49, 2633, 2678 |
| RseI | CAYNNNNRTG | 3 cut(s) | 951, 3640, 4005 |
| SacI | GAGCTC | 1 cut(s) | 1371 |
| SacII | CCGCGG | 1 cut(s) | 1408 |
| SbfI | CCTGCAGG | 1 cut(s) | 754 |
| ScaI | AGTACT | 1 cut(s) | 2600 |
| SchI | GAGTC | 7 cut(s) | 233, 421, 1012, 1066, 1078, 1211, 3626 |
| SdaI | CCTGCAGG | 1 cut(s) | 754 |
| SduI | GDGCHC | 3 cut(s) | 1371, 3750, 4401 |
| SfcI | CTRYAG | 5 cut(s) | 523, 750, 2061, 2070, 2451 |
| Sfr274I | CTCGAG | 2 cut(s) | 164, 1364 |
| Sfr303I | CCGCGG | 1 cut(s) | 1408 |
| SgrAI | CRCCGGYG | 2 cut(s) | 1063, 1535 |
| SgrBI | CCGCGG | 1 cut(s) | 1408 |
| SlaI | CTCGAG | 2 cut(s) | 164, 1364 |
| SmaI | CCCGGG | 3 cut(s) | 346, 454, 585 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 951, 3640, 4005 |
| SmlI | CTYRAG | 5 cut(s) | 164, 1283, 1364, 1391, 1553 |
| SmoI | CTYRAG | 5 cut(s) | 164, 1283, 1364, 1391, 1553 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 754 |
| SspI | AATATT | 1 cut(s) | 2444 |
| SspMI | CTAG | 7 cut(s) | 314, 834, 863, 1595, 1797, 3837, 4143 |
| SstI | GAGCTC | 1 cut(s) | 1371 |
| StyI | CCWWGG | 6 cut(s) | 1152, 1173, 3264, 3402, 3476, 4255 |
| TaiI | ACGT | 7 cut(s) | 80, 408, 702, 1529, 1774, 3107, 3513 |
| TaqI | TCGA | 7 cut(s) | 144, 165, 1134, 1365, 1383, 1681, 2245 |
| TaqII | GACCGA | 1 cut(s) | 3278 |
| TatI | WGTACW | 3 cut(s) | 2598, 3898, 4062 |
| TseFI | GTSAC | 7 cut(s) | 220, 2521, 2910, 3044, 3394, 4069, 4367 |
| Tsp45I | GTSAC | 7 cut(s) | 220, 2521, 2910, 3044, 3394, 4069, 4367 |
| TspGWI | ACGGA | 2 cut(s) | 519, 615 |
| TspMI | CCCGGG | 3 cut(s) | 344, 452, 583 |
| Vha464I | CTTAAG | 1 cut(s) | 1553 |
| VneI | GTGCAC | 1 cut(s) | 3746 |
| VspI | ATTAAT | 1 cut(s) | 3362 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1172 |
| XapI | RAATTY | 9 cut(s) | 660, 1260, 2588, 3233, 3582, 4084, 4132, 4284, 4320 |
| XbaI | TCTAGA | 1 cut(s) | 862 |
| XceI | RCATGY | 2 cut(s) | 956, 1606 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4324 |
| XhoI | CTCGAG | 2 cut(s) | 164, 1364 |
| XmaI | CCCGGG | 3 cut(s) | 344, 452, 583 |
| XmiI | GTMKAC | 3 cut(s) | 504, 638, 964 |
| XmnI | GAANNNNTTC | 4 cut(s) | 89, 2410, 4132, 4305 |
| XspI | CTAG | 7 cut(s) | 314, 834, 863, 1595, 1797, 3837, 4143 |
| ZrmI | AGTACT | 1 cut(s) | 2600 |
| Zsp2I | ATGCAT | 2 cut(s) | 2269, 3146 |