Rmu_co8505723.1_g000001

trafficking protein particle complex

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8505723.1
OG0011992
Physical Location & Seq
Reverse (-)
519 .. 3259
2741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8505723.1_g000001.1.cds

Sequence Viewer

Length: 1901 bp
ccgccgccgccgcgcctcctcccgccggaattttgaagcgcgattggcttctcaagcaccgcaccaaagtccccgccgttgtcgccgccctcatctcctcggatcgggtctccggcgacccggcccagtggctcgagctctgctccgagatcgacaatctcaaggggctcatccgcggccggagcatcaaattggtcgtcgtcgtcgtcaactcccactccactgaaatctctgaagatcaaatggttgcggtgaggaaacgagctgaagtagatgccaagtatcttctcacgttctacaccggcgaagattctcagcttaagcaatctctgcatagattgggaactgtatttgccgagctagccggcatgtattacagagatgaaggaagaaggattaaattgcgcattgagaggaagagttctggtcctactgacttgaacattcgatattccttcaaagttgctgtgtttgcggagttcagaagagactgggtggaagctttgaggttttatgaggatgcttatcatatgctacgtgaggtgattcccggggtgtcaactaggttgtcagccattcaacggttagtggagataaaaactgtggcagagcaattgcatttcaaaatctcaactttgttattgcatggtggaaagattatggaagcagttatatggttccgccaacacaatgcttcgtacagaaagctcaaaggatcaccagaagctatatttcttcactgggagtggatgagcagacagttcttggtgtttgctgagttgctggagacaagttcagcagccattcagagcatttcacatctaactgcaggcactgcagatagacctttgaccgagtgggagtttcagccagctcattactatcagttagctgctcattacttgaaggagaagagatcttctttggactttgcagtttctatgtcagaaggtgagattgattatagtgctgaatctgtggcaccctcatcccatatgggtcagtttgctcgattgattgaacaaggagatgcatttgtcatgcagccccttactgatgaagagtatatgcgttatgcaatttctgaaggaaaaaggttccaagattcctttgaaattattgctttactcaaaaaatcttgtgaatcttacaataatctaaaagtcaggagaatggcttcattttgtgggttccagatggccagagaatattatgctgcaggtgattttaacaacgccaaacttctttttgatgacattgcaagtctatacaggcaagagggatgggtcactttgctgtgggaggtattaggttacttgcgtgaaggttcaaggaaacacagcaaagttaaagaatttatagagtactcctttgagatggctgcactccctatatcagctgatactgagatccagtcttttagatttgaagaatctggtccagctgggcctgctaccctccaacaaagagaaacaatacataaagaagtttttgggcttgttagtgaaaaactggggttggcatctactgaaaacggtgatgatgtcaaagtaagcggcaccaatccacttcaccttgaaattgatctcgtcagtccccttagattggtactccttgcttcagttgcttttcatgaacaaataatcaagcctggctcatccacattggttacactgtcactcttatcacagttaccacttaattttgagattgatcaattagaagtccagttcaatcagtctcattgtaactttgtgatcatggatgcccaaaagcctcatgtagcttcctcgactgatggtcaatcaggtcaccgaagagagactgctccatctctgcgactttctacaaacaaatggctccggttaacgtatgacatcaaatcgggtatgcctccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Foie-gras_1 Gryzun-like

Protein Analysis

632

Amino Acids

71.6

Weight (kDa)

6.48

Isoelectric Point (pI)

49.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011992)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G65950
fragaria_vesca FvH4_1g10000
malus_domestica MD15G1228100.v1.1
prunus_persica Prupe.7G186800_v2.0.a1 Prupe.7G186800_v2.0.a1
pyrus_communis pycom15g20290
rosa_chinensis RchiOBHm_Chr2g0096791
rosa_laevigata RLG00000016670 RLG00000023097
rosa_multiflora Rmu_co8505723.1_g000001 Rmu_sc0004938.1_g000018 Rmu_ssc0000215.1_g000031
rosa_roxburghii Rroxscaffold_2G00145310
rosa_rugosa Rorug02G0060900
rosa_samantha Rh2AG108200 Rh2BG110400 Rh2CG112300 Rh2DG111700
rosa_wichuraiana Rw2G008370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1210
Acc16I TGCGCA 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 1210
AccB1I GGYRCC 2 cut(s) 981, 1558
AccII CGCG 3 cut(s) 13, 41, 176
AclWI GGATC 3 cut(s) 110, 723, 1404
AcoI YGGCCR 2 cut(s) 177, 1199
AcsI RAATTY 2 cut(s) 29, 1354
AcuI CTGAAG 4 cut(s) 254, 287, 1106, 1604
AfaI GTAC 3 cut(s) 700, 1366, 1610
AfiI CCNNNNNNNGG 4 cut(s) 25, 104, 581, 1605
AflII CTTAAG 1 cut(s) 319
AhdI GACNNNNNGTC 1 cut(s) 1799
AjnI CCWGG 1 cut(s) 1650
Alw21I GWGCWC 1 cut(s) 140
Alw26I GTCTC 5 cut(s) 114, 482, 781, 1745, 1816
AlwI GGATC 3 cut(s) 110, 723, 1404
AlwNI CAGNNNCTG 1 cut(s) 835
Ama87I CYCGRG 2 cut(s) 133, 550
AoxI GGCC 4 cut(s) 122, 177, 1199, 1447
ApeKI GCWGC 5 cut(s) 799, 892, 1044, 1216, 1381
ApoI RAATTY 2 cut(s) 29, 1354
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
Asp700I GAANNNNTTC 1 cut(s) 1176
AspLEI GCGC 3 cut(s) 15, 41, 407
AspS9I GGNCC 4 cut(s) 123, 427, 1438, 1447
AsuC2I CCSGG 3 cut(s) 121, 551, 552
AsuHPI GGTGA 8 cut(s) 264, 555, 710, 964, 1234, 1549, 1564, 1804
AsuNHI GCTAGC 1 cut(s) 360
AvaI CYCGRG 2 cut(s) 133, 550
AvaII GGWCC 2 cut(s) 427, 1438
BalI TGGCCA 1 cut(s) 1201
BanI GGYRCC 2 cut(s) 981, 1558
BanII GRGCYC 2 cut(s) 140, 170
Bbv12I GWGCWC 1 cut(s) 140
BbvI GCAGC 5 cut(s) 811, 879, 1056, 1203, 1368
BccI CCATC 5 cut(s) 1191, 1277, 1371, 1792, 1839
BceAI ACGGC 1 cut(s) 61
BciT130I CCWGG 1 cut(s) 1652
BclI TGATCA 2 cut(s) 1713, 1757
BcnI CCSGG 3 cut(s) 121, 551, 552
BcoDI GTCTC 5 cut(s) 114, 482, 781, 1745, 1816
BfaI CTAG 2 cut(s) 361, 563
BfmI CTRYAG 3 cut(s) 827, 836, 1217
BfrI CTTAAG 1 cut(s) 319
BfuAI ACCTGC 1 cut(s) 1210
BglII AGATCT 1 cut(s) 916
BmcAI AGTACT 1 cut(s) 1366
Bme1390I CCNGG 4 cut(s) 121, 551, 552, 1652
Bme18I GGWCC 2 cut(s) 427, 1438
BmeRI GACNNNNNGTC 1 cut(s) 1799
BmeT110I CYCGRG 2 cut(s) 133, 550
BmgT120I GGNCC 4 cut(s) 123, 427, 1438, 1447
BmiI GGNNCC 6 cut(s) 679, 983, 1099, 1192, 1560, 1861
BmrFI CCNGG 4 cut(s) 121, 551, 552, 1652
BmrI ACTGGG 4 cut(s) 120, 501, 750, 1522
BmsI GCATC 6 cut(s) 194, 264, 510, 1020, 1531, 1755
BmtI GCTAGC 1 cut(s) 364
BmuI ACTGGG 4 cut(s) 120, 501, 750, 1522
BplI GAGNNNNNCTC 2 cut(s) 127, 159
BpmI CTGGAG 1 cut(s) 805
BpuEI CTTGAG 2 cut(s) 37, 145
BpuMI CCSGG 3 cut(s) 121, 551, 552
BsaAI YACGTR 1 cut(s) 538
BsaBI GATNNNNATC 1 cut(s) 524
BsaI GGTCTC 1 cut(s) 114
BsaJI CCNNGG 4 cut(s) 98, 174, 550, 551
BsaWI WCCGGW 1 cut(s) 1862
BsaXI ACNNNNNCTCC 2 cut(s) 202, 232
Bsc4I CCNNNNNNNGG 4 cut(s) 25, 104, 581, 1605
Bse118I RCCGGY 2 cut(s) 301, 364
Bse1I ACTGG 6 cut(s) 126, 496, 745, 1413, 1517, 1728
Bse3DI GCAATG 1 cut(s) 1256
Bse8I GATNNNNATC 1 cut(s) 524
BseBI CCWGG 1 cut(s) 1652
BseDI CCNNGG 4 cut(s) 98, 174, 550, 551
BseGI GGATG 7 cut(s) 170, 525, 755, 988, 1288, 1657, 1770
BseJI GATNNNNATC 1 cut(s) 524
BseLI CCNNNNNNNGG 4 cut(s) 25, 104, 581, 1605
BseMI GCAATG 1 cut(s) 1256
BseMII CTCAG 3 cut(s) 328, 767, 1397
BseNI ACTGG 6 cut(s) 126, 496, 745, 1413, 1517, 1728
BseRI GAGGAG 2 cut(s) 8, 87
BseX3I CGGCCG 1 cut(s) 177
BseXI GCAGC 5 cut(s) 811, 879, 1056, 1203, 1368
BseYI CCCAGC 1 cut(s) 1444
BsgI GTGCAG 1 cut(s) 1367
Bsh1236I CGCG 3 cut(s) 13, 41, 176
Bsh1285I CGRYCG 1 cut(s) 180
BshFI GGCC 4 cut(s) 124, 179, 1201, 1449
BshNI GGYRCC 2 cut(s) 981, 1558
BsiEI CGRYCG 1 cut(s) 180
BsiHKAI GWGCWC 1 cut(s) 140
BsiHKCI CYCGRG 2 cut(s) 133, 550
BsiSI CCGG 8 cut(s) 26, 113, 121, 180, 302, 365, 551, 1863
BslFI GGGAC 2 cut(s) 55, 1580
BslI CCNNNNNNNGG 4 cut(s) 25, 104, 581, 1605
BsmAI GTCTC 5 cut(s) 114, 482, 781, 1745, 1816
BsmFI GGGAC 2 cut(s) 55, 1580
BsnI GGCC 4 cut(s) 124, 179, 1201, 1449
Bso31I GGTCTC 1 cut(s) 114
BsoBI CYCGRG 2 cut(s) 133, 550
Bsp1286I GDGCHC 2 cut(s) 140, 170
Bsp143I GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
BspANI GGCC 4 cut(s) 124, 179, 1201, 1449
BspCNI CTCAG 3 cut(s) 327, 768, 1398
BspFNI CGCG 3 cut(s) 13, 41, 176
BspHI TCATGA 1 cut(s) 1632
BspLI GGNNCC 6 cut(s) 679, 983, 1099, 1192, 1560, 1861
BspMAI CTGCAG 3 cut(s) 831, 840, 1221
BspMI ACCTGC 1 cut(s) 1210
BspOI GCTAGC 1 cut(s) 364
BspPI GGATC 3 cut(s) 110, 723, 1404
BspT107I GGYRCC 2 cut(s) 981, 1558
BspTI CTTAAG 1 cut(s) 319
BspTNI GGTCTC 1 cut(s) 114
BsrDI GCAATG 1 cut(s) 1256
BsrFI RCCGGY 2 cut(s) 301, 364
BsrI ACTGG 6 cut(s) 126, 496, 745, 1413, 1517, 1728
BssAI RCCGGY 2 cut(s) 301, 364
BssECI CCNNGG 4 cut(s) 98, 174, 550, 551
BssMI GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
Bst2UI CCWGG 1 cut(s) 1652
Bst4CI ACNGT 7 cut(s) 348, 584, 603, 761, 1537, 1676, 1691
Bst6I CTCTTC 5 cut(s) 412, 480, 907, 1055, 1812
BstAFI CTTAAG 1 cut(s) 319
BstAPI GCANNNNNTGC 2 cut(s) 330, 835
BstBAI YACGTR 1 cut(s) 538
BstC8I GCNNGC 5 cut(s) 362, 366, 831, 872, 1451
BstDEI CTNAG 4 cut(s) 314, 776, 1406, 1600
BstDSI CCRYGG 1 cut(s) 174
BstEII GGTNACC 1 cut(s) 1810
BstF5I GGATG 7 cut(s) 170, 525, 755, 988, 1288, 1657, 1770
BstFNI CGCG 3 cut(s) 13, 41, 176
BstHHI GCGC 3 cut(s) 15, 41, 407
BstKTI GATC 9 cut(s) 105, 152, 240, 718, 919, 1412, 1587, 1716, 1760
BstMAI GTCTC 5 cut(s) 114, 482, 781, 1745, 1816
BstMBI GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
BstMCI CGRYCG 1 cut(s) 180
BstNI CCWGG 1 cut(s) 1652
BstNSI RCATGY 1 cut(s) 372
BstPI GGTNACC 1 cut(s) 1810
BstSCI CCNGG 4 cut(s) 119, 549, 550, 1650
BstSFI CTRYAG 3 cut(s) 827, 836, 1217
BstUI CGCG 3 cut(s) 13, 41, 176
BstV1I GCAGC 5 cut(s) 811, 879, 1056, 1203, 1368
BstX2I RGATCY 2 cut(s) 916, 1409
BstYI RGATCY 2 cut(s) 916, 1409
BstZI CGGCCG 1 cut(s) 177
BsuRI GGCC 4 cut(s) 124, 179, 1201, 1449
BtgI CCRYGG 1 cut(s) 174
BtsCI GGATG 7 cut(s) 170, 525, 755, 988, 1288, 1657, 1770
BtsI GCAGTG 1 cut(s) 833
BtsIMutI CAGTG 5 cut(s) 133, 221, 738, 833, 1672
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 5 cut(s) 362, 366, 831, 872, 1451
CaiI CAGNNNCTG 1 cut(s) 835
CciI TCATGA 1 cut(s) 1632
CfoI GCGC 3 cut(s) 15, 41, 407
Cfr10I RCCGGY 2 cut(s) 301, 364
Cfr13I GGNCC 4 cut(s) 123, 427, 1438, 1447
Cfr42I CCGCGG 1 cut(s) 177
Cfr9I CCCGGG 1 cut(s) 550
Csp6I GTAC 3 cut(s) 699, 1365, 1609
CviAII CATG 7 cut(s) 369, 646, 1041, 1633, 1761, 1780, 1898
CviQI GTAC 3 cut(s) 699, 1365, 1609
DdeI CTNAG 4 cut(s) 314, 776, 1406, 1600
DpnI GATC 9 cut(s) 104, 151, 239, 717, 918, 1411, 1586, 1715, 1759
DpnII GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
DriI GACNNNNNGTC 1 cut(s) 1799
EaeI YGGCCR 2 cut(s) 177, 1199
EagI CGGCCG 1 cut(s) 177
Eam1104I CTCTTC 5 cut(s) 412, 480, 907, 1055, 1812
Eam1105I GACNNNNNGTC 1 cut(s) 1799
EarI CTCTTC 5 cut(s) 412, 480, 907, 1055, 1812
EciI GGCGGA 1 cut(s) 670
Ecl136II GAGCTC 1 cut(s) 138
EclXI CGGCCG 1 cut(s) 177
Eco24I GRGCYC 2 cut(s) 140, 170
Eco31I GGTCTC 1 cut(s) 114
Eco47I GGWCC 2 cut(s) 427, 1438
Eco52I CGGCCG 1 cut(s) 177
Eco53kI GAGCTC 1 cut(s) 138
Eco57I CTGAAG 4 cut(s) 254, 287, 1106, 1604
Eco88I CYCGRG 2 cut(s) 133, 550
Eco91I GGTNACC 1 cut(s) 1810
EcoICRI GAGCTC 1 cut(s) 138
EcoO65I GGTNACC 1 cut(s) 1810
EcoRII CCWGG 1 cut(s) 1650
EcoT22I ATGCAT 1 cut(s) 1035
EcoT38I GRGCYC 2 cut(s) 140, 170
FaeI CATG 7 cut(s) 372, 649, 1044, 1636, 1764, 1783, 1901
FaqI GGGAC 2 cut(s) 55, 1580
FatI CATG 7 cut(s) 368, 645, 1040, 1632, 1760, 1779, 1897
FauI CCCGC 2 cut(s) 30, 81
FauNDI CATATG 2 cut(s) 530, 995
FbaI TGATCA 2 cut(s) 1713, 1757
FokI GGATG 7 cut(s) 157, 532, 762, 975, 1295, 1644, 1777
FriOI GRGCYC 2 cut(s) 140, 170
FspBI CTAG 2 cut(s) 361, 563
FspI TGCGCA 1 cut(s) 406
GlaI GCGC 3 cut(s) 14, 40, 406
GsaI CCCAGC 1 cut(s) 1448
GsuI CTGGAG 1 cut(s) 805
HaeIII GGCC 4 cut(s) 124, 179, 1201, 1449
HapII CCGG 8 cut(s) 26, 113, 121, 180, 302, 365, 551, 1863
HhaI GCGC 3 cut(s) 15, 41, 407
Hin1II CATG 7 cut(s) 372, 649, 1044, 1636, 1764, 1783, 1901
Hin6I GCGC 3 cut(s) 13, 39, 405
HinP1I GCGC 3 cut(s) 13, 39, 405
HincII GTYRAC 3 cut(s) 210, 560, 1868
HindII GTYRAC 3 cut(s) 210, 560, 1868
HindIII AAGCTT 1 cut(s) 500
HinfI GANTC 6 cut(s) 310, 546, 973, 1105, 1144, 1432
HpaI GTTAAC 1 cut(s) 1868
HpaII CCGG 8 cut(s) 26, 113, 121, 180, 302, 365, 551, 1863
HphI GGTGA 8 cut(s) 264, 555, 710, 964, 1234, 1549, 1564, 1804
Hpy166II GTNNAC 3 cut(s) 210, 560, 1868
Hpy188I TCNGA 7 cut(s) 102, 147, 234, 484, 809, 948, 1086
Hpy188III TCNNGA 3 cut(s) 1167, 1194, 1633
Hpy8I GTNNAC 3 cut(s) 210, 560, 1868
Hpy99I CGWCG 3 cut(s) 202, 205, 208
HpyAV CCTTC 7 cut(s) 379, 386, 465, 900, 943, 1081, 1318
HpyCH4III ACNGT 7 cut(s) 348, 584, 603, 761, 1537, 1676, 1691
HpyCH4IV ACGT 3 cut(s) 292, 537, 1870
HpyF3I CTNAG 4 cut(s) 314, 776, 1406, 1600
HpySE526I ACGT 3 cut(s) 292, 537, 1870
Hsp92II CATG 7 cut(s) 372, 649, 1044, 1636, 1764, 1783, 1901
HspAI GCGC 3 cut(s) 13, 39, 405
KroI GCCGGC 1 cut(s) 364
KroNI GCCGGC 1 cut(s) 366
Ksp22I TGATCA 2 cut(s) 1713, 1757
KspAI GTTAAC 1 cut(s) 1868
KspI CCGCGG 1 cut(s) 177
Kzo9I GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
LmnI GCTCC 4 cut(s) 148, 182, 1833, 1865
Lsp1109I GCAGC 5 cut(s) 811, 879, 1056, 1203, 1368
LweI GCATC 6 cut(s) 194, 264, 510, 1020, 1531, 1755
MaeI CTAG 2 cut(s) 361, 563
MaeII ACGT 3 cut(s) 292, 537, 1870
MaeIII GTNAC 7 cut(s) 1287, 1312, 1668, 1676, 1691, 1747, 1810
MalI GATC 9 cut(s) 104, 151, 239, 717, 918, 1411, 1586, 1715, 1759
MboI GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
MfeI CAATTG 1 cut(s) 613
MflI RGATCY 2 cut(s) 916, 1409
MhlI GDGCHC 2 cut(s) 140, 170
MlsI TGGCCA 1 cut(s) 1201
MluNI TGGCCA 1 cut(s) 1201
MmeI TCCRAC 1 cut(s) 1485
Mox20I TGGCCA 1 cut(s) 1201
Mph1103I ATGCAT 1 cut(s) 1035
MroNI GCCGGC 1 cut(s) 364
MroXI GAANNNNTTC 1 cut(s) 1176
MscI TGGCCA 1 cut(s) 1201
MseI TTAA 6 cut(s) 320, 398, 1229, 1349, 1700, 1867
Msp20I TGGCCA 1 cut(s) 1201
MspA1I CMGCKG 3 cut(s) 176, 1399, 1444
MspCI CTTAAG 1 cut(s) 319
MspI CCGG 8 cut(s) 26, 113, 121, 180, 302, 365, 551, 1863
MspR9I CCNGG 4 cut(s) 121, 551, 552, 1652
MunI CAATTG 1 cut(s) 613
MvaI CCWGG 1 cut(s) 1652
MvnI CGCG 3 cut(s) 13, 41, 176
NaeI GCCGGC 1 cut(s) 366
NciI CCSGG 3 cut(s) 121, 551, 552
NdeI CATATG 2 cut(s) 530, 995
NdeII GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
NgoMIV GCCGGC 1 cut(s) 364
NheI GCTAGC 1 cut(s) 360
NlaIII CATG 7 cut(s) 372, 649, 1044, 1636, 1764, 1783, 1901
NlaIV GGNNCC 6 cut(s) 679, 983, 1099, 1192, 1560, 1861
NmeAIII GCCGAG 1 cut(s) 381
NmuCI GTSAC 3 cut(s) 1287, 1676, 1810
NsbI TGCGCA 1 cut(s) 406
NsiI ATGCAT 1 cut(s) 1035
NspI RCATGY 1 cut(s) 372
PaeR7I CTCGAG 1 cut(s) 133
PagI TCATGA 1 cut(s) 1632
PaqCI CACCTGC 1 cut(s) 1210
PcsI WCGNNNNNNNCGW 1 cut(s) 203
PdiI GCCGGC 1 cut(s) 366
PdmI GAANNNNTTC 1 cut(s) 1176
PfeI GAWTC 6 cut(s) 310, 546, 973, 1105, 1144, 1432
Ppu21I YACGTR 1 cut(s) 538
Psp124BI GAGCTC 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 1650
PspEI GGTNACC 1 cut(s) 1810
PspFI CCCAGC 1 cut(s) 1444
PspGI CCWGG 1 cut(s) 1650
PspN4I GGNNCC 6 cut(s) 679, 983, 1099, 1192, 1560, 1861
PspPI GGNCC 4 cut(s) 123, 427, 1438, 1447
PspXI VCTCGAGB 1 cut(s) 133
PstI CTGCAG 3 cut(s) 831, 840, 1221
PstNI CAGNNNCTG 1 cut(s) 835
PsuI RGATCY 2 cut(s) 916, 1409
PvuII CAGCTG 2 cut(s) 1399, 1444
RsaI GTAC 3 cut(s) 700, 1366, 1610
RsaNI GTAC 3 cut(s) 699, 1365, 1609
SacI GAGCTC 1 cut(s) 140
SacII CCGCGG 1 cut(s) 177
SaqAI TTAA 6 cut(s) 320, 398, 1229, 1349, 1700, 1867
Sau3AI GATC 9 cut(s) 102, 149, 237, 715, 916, 1409, 1584, 1713, 1757
Sau96I GGNCC 4 cut(s) 123, 427, 1438, 1447
ScaI AGTACT 1 cut(s) 1366
ScrFI CCNGG 4 cut(s) 121, 551, 552, 1652
SduI GDGCHC 2 cut(s) 140, 170
SfaNI GCATC 6 cut(s) 194, 264, 510, 1020, 1531, 1755
SfcI CTRYAG 3 cut(s) 827, 836, 1217
Sfr274I CTCGAG 1 cut(s) 133
Sfr303I CCGCGG 1 cut(s) 177
SgrAI CRCCGGYG 1 cut(s) 301
SgrBI CCGCGG 1 cut(s) 177
SinI GGWCC 2 cut(s) 427, 1438
SlaI CTCGAG 1 cut(s) 133
SmaI CCCGGG 1 cut(s) 552
SmlI CTYRAG 4 cut(s) 52, 133, 160, 319
SmoI CTYRAG 4 cut(s) 52, 133, 160, 319
SspI AATATT 1 cut(s) 1210
SspMI CTAG 2 cut(s) 361, 563
SstI GAGCTC 1 cut(s) 140
StyD4I CCNGG 4 cut(s) 119, 549, 550, 1650
TaaI ACNGT 7 cut(s) 348, 584, 603, 761, 1537, 1676, 1691
TaiI ACGT 3 cut(s) 295, 540, 1873
TaqI TCGA 5 cut(s) 134, 152, 447, 1011, 1792
TaqII GACCGA 1 cut(s) 868
TatI WGTACW 1 cut(s) 1364
TauI GCSGC 6 cut(s) 7, 10, 13, 88, 179, 1559
TfiI GAWTC 6 cut(s) 310, 546, 973, 1105, 1144, 1432
Tru1I TTAA 6 cut(s) 320, 398, 1229, 1349, 1700, 1867
Tru9I TTAA 6 cut(s) 320, 398, 1229, 1349, 1700, 1867
TscAI CASTG 5 cut(s) 133, 228, 745, 840, 1679
TseFI GTSAC 3 cut(s) 1287, 1676, 1810
TseI GCWGC 5 cut(s) 799, 892, 1044, 1216, 1381
Tsp45I GTSAC 3 cut(s) 1287, 1676, 1810
TspDTI ATGAA 5 cut(s) 398, 1073, 1169, 1621, 1649
TspMI CCCGGG 1 cut(s) 550
TspRI CASTG 5 cut(s) 133, 228, 745, 840, 1679
Vha464I CTTAAG 1 cut(s) 319
VpaK11BI GGWCC 2 cut(s) 427, 1438
XapI RAATTY 2 cut(s) 29, 1354
XceI RCATGY 1 cut(s) 372
XhoI CTCGAG 1 cut(s) 133
XmaI CCCGGG 1 cut(s) 550
XmnI GAANNNNTTC 1 cut(s) 1176
XspI CTAG 2 cut(s) 361, 563
ZrmI AGTACT 1 cut(s) 1366
Zsp2I ATGCAT 1 cut(s) 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.