Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003268

Physical Location & Seq

Genomic Coordinates Forward (+)

28480977 .. 28484357

Gene Structure 3381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023801

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGGAACACCCTAACCTTGTTATACCCTTCCTTCTTCTCCTTTCCCTCCTTTCAGTGGCGTTCAGCGCCACAGACCCTAATGACCTGGCCATTCTCAACCAGTTCAAGAAAAACATGGAGAATTCCGAGCTCCTGAACTGGCCTGACAATGGCGACGACCCTTGTGGCCCTCCACTGTGGGACCATGTGTACTGTTCTGGTAATAGGGTTTCCCAGATTCAGGTTCAGAATCTGGGCTTGAAGGGTCCTCTGCCCCAGAATCTGAACCAGCTCTCTGAGCTCTCCAACATAGGCCTCCAGAGGAACCATTTCAGTGGGCCTTTGCCTACTCTCAAAGGCTTGTCTAAATTGAAGTATGCTTTTCTTGATTACAATGATTTCAGTTCTATTCCCGGTGATTTTTTCCAAGGCCTTGATGCTCTGGAGGTTCTGGCATTGGACGGCTTGGATTTGAATGCCACTACAGGGTGGACATTCCCTCCACAGTTACTGAATTCGGCGCAGTTGCAGAATCTCACCTGTGGGAGTTGCAATCTGGTTGGTCCGTTGCCGGATTTTCTCGGCAACTTTTCGTCGCTAACTGTGTTAGAGCTTTCAGGGAATGGTTTGACCGGCGAAATTCCGAAGAGTTTTACTGGCCTTAACTTGCAGAGTCTCCAGTTGAACAATCCGAAAGGCGGCGGAATGAGTGGTCCTATTGATGTGATCACAACAATGGCGCAGCTCAACTTGGCTTGGCTTCATGGGAATCAGTTCACAGGTACTATCCCCGACAGCATTGGTGATTTGGTTTCTTTGAAGGATCTTAATCTGAATCAAAACCAACTTAGTGGTGTGATTCCTGCTAGTTTGGCTAATCTGGAACTTGATGCATTGAATTTGAACAATAACCATTTCATGGGTCCAATACCAGAGTTTAAGGCAAAGAATGTGAGTTATGATTCAAATGCATTCTGTTTACCAACTCCGGGGCTTCCTTGTGCGCCGGAGGTTATGGCGCTTATAGGGTTTCTTGAGGGGTTGGATTTCCCTACAACACTTGCTTCTAAGTGGTCTGGCAATGATCCTTGCAATGGGTCATGGTTGGGAGTGAGTTGTGGCAACAATGGGAAGGTGTCTGTTATAAATCTGCCCAAGTATAATCTCAATGGTACGTTGAGTCCTTCAGTTGCTAAGTTAGATTCTCTTGTACAGATTAAGCTTCAGAATAACCATTTGACGGGTACAATTCCTGCCAACTGGACTAGCTTGAAAAGCCTGACAATGCTGGATCTAACTGGGAATGATATTAGCCCTCCATTGCCAAAATTTGTCAACACCGTTAAAGTGGTCATTGATGGGAATCCTTTGTTTCATGGCAATCCATCTGAGCAAGGCCCAGCACCAGAGAATAATTCTTCATCAACGACCAACCCATCTTCCCCTACGGACACAAGTTCTAATGGGAATGGTACTTCTCAATCAAAAGGATCAAAAGGCACCAACATAGTTTCAATTGTTGCTCCTGTTACAAGTGTTGCTGTTGTTGCTTTGCTTGTAATTCCTTTATCCATCTACTATTGTAAGAAGAGAAGAACTGGCTTCCAGGCTCCAAGTTCCCTTGTAGTTCATCCAAGAGATCCATCTGATTCAGATAACAGGGTTAAGATTGTCGTTGCCGCTAATACCACTGGAAGCACTTCTACCCTTACGGGGAGCGGTTCTGCAAGCAGAAACAGCAGTGGGATAGGTGAGTCTCATGTCATTGAAGCTGGAAATCTCGTCATATCAGTTCAAGTTCTTCGGAATGTGACAAAGAATTTTGCCCCTGAAAATGAGCTTGGTCGTGGTGGTTTTGGGGTTGTTTATAAGGGAGAATTGGATGATGGGACAAAAATAGCAGTGAAAAGAATGGAGGCAGAACCTCTCTCTTGGATGAGGAGGCTAAATATTGCCTTGGACGTCGCTAGGGGGCTGGAGTATCTTCATAATCTTGCACACCAAAGCTTCATACACAGAGACCTCAAGTCATCAAACATCTTACTTGGTGATGATTTTAAAGCAAAAATATCAGATTTTGGATTGGTGAAACTGGCTCCTGATGGTGAAAAATCTGTTGTGACCAGGCTTGCTGGAACGTTTGGTTACTTAGCACCAGAGTATGCTGTGACAGGAAAAATTACAACCAAAGTAGATGTATTCAGTTTTGGGGTTGTGCTAATGGAGCTATTAACTGGAATGATGGCGCTGGATGATGATAGGCCTGAAGAAAGCCAGTACTTGGCTGCATGGTTCTGGCACATCAAATCAAATAAGGAGAAACTGTTGGCAGCCATTGACCCAACCCTTGATATAAAAGACATGAAAGAAGAAACATTTGAGAGCATCGCCACAATTGCGGAACTAGCTGGGCACTGCACTGCAAGGGAACCCAGCCAAAGACCAGATATGGGTCATGCTGTGAATGTATTGTCCCCACTGGTTGAAAAATGGAAACCATTTAATGATGAGGATGATGAATATTCTGGCATAGACTACAGCCTCCCGCTTAACCAGATGGTGAAAGGTTGGCAGGAAGCAGAAGGAAAGGATTCCAGTTACATGGACCTAGAAGACAGCAAGAGCAGTATACCAGCACGGCCAACTGGGTTTGCAGACTCTTTTACTTCGGCTGATGGTCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

888

Amino Acids

95.43

Weight (kDa)

5.01

Isoelectric Point (pI)

30.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	247 - 299	5.2e-06	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	633 - 815	2.2e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	643 - 814	7.4e-27	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003268)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g26630 FvH4_3g26630 FvH4_6g20300
malus_domestica	MD03G1154600.v1.1 MD12G1040200.v1.1 MD14G1038700.v1.1
prunus_persica	Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.7G094700_v2.0.a1
pyrus_communis	pycom03g10840 pycom12g03440 pycom14g03340
rosa_chinensis	RchiOBHm_Chr3g0475921 RchiOBHm_Chr5g0048201
rosa_laevigata	RLG00000023801 RLG00000034502
rosa_multiflora	Rmu_sc0001408.1_g000015 Rmu_sc0009168.1_g000004
rosa_roxburghii	Rroxscaffold_1G00033720 Rroxscaffold_6G00405730
rosa_rugosa	Rorug03G0151900 Rorug05G0237000 Rorug05G0237100
rosa_samantha	Rh3AG202700 Rh3BG232600 Rh3CG228000 Rh3DG228200 Rh5AG316200 Rh5BG326800 Rh5CG353000 Rh5DG337800
rosa_wichuraiana	Rw3G018440 Rw5G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1124, 1848
AatII	GACGTC	1 cut(s)	1944
AccB1I	GGYRCC	1 cut(s)	1478
AccB7I	CCANNNNNTGG	2 cut(s)	898, 2260
AccBSI	CCGCTC	1 cut(s)	1698
AccI	GTMKAC	1 cut(s)	2608
AciI	CCGC	6 cut(s)	678, 681, 1659, 1698, 2378, 2525
AclI	AACGTT	1 cut(s)	2117
AclWI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1613
AcoI	YGGCCR	2 cut(s)	87, 2618
AcsI	RAATTY	6 cut(s)	121, 493, 618, 877, 1307, 1798
AcuI	CTGAAG	3 cut(s)	1149, 1187, 2265
AcyI	GRCGYC	1 cut(s)	1941
AfaI	GTAC	7 cut(s)	191, 763, 1153, 1191, 1225, 1453, 2258
AhdI	GACNNNNNGTC	1 cut(s)	2005
AjnI	CCWGG	3 cut(s)	84, 1584, 2102
AjuI	GAANNNNNNNTTGG	2 cut(s)	1803, 1835
Alw21I	GWGCWC	2 cut(s)	132, 282
Alw26I	GTCTC	3 cut(s)	659, 1740, 1992
AlwI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1613
AlwNI	CAGNNNCTG	3 cut(s)	232, 262, 490
ApeKI	GCWGC	3 cut(s)	721, 2264, 2309
ApoI	RAATTY	6 cut(s)	121, 493, 618, 877, 1307, 1798
Asp700I	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2569
AspLEI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2227
AspS9I	GGNCC	9 cut(s)	167, 181, 245, 317, 542, 692, 902, 1376, 2584
AsuC2I	CCSGG	2 cut(s)	393, 969
AsuHPI	GGTGA	8 cut(s)	407, 508, 794, 1742, 2039, 2077, 2096, 2551
AvaII	GGWCC	6 cut(s)	181, 245, 542, 692, 902, 2584
BaeGI	GKGCMC	1 cut(s)	2394
BalI	TGGCCA	1 cut(s)	89
BanI	GGYRCC	1 cut(s)	1478
BanII	GRGCYC	2 cut(s)	132, 282
BarI	GAAGNNNNNNTAC	2 cut(s)	1666, 1698
BbsI	GAAGAC	1 cut(s)	2598
Bbv12I	GWGCWC	2 cut(s)	132, 282
BbvI	GCAGC	3 cut(s)	733, 2251, 2321
BceAI	ACGGC	2 cut(s)	457, 2633
BciT130I	CCWGG	3 cut(s)	86, 1586, 2104
BclI	TGATCA	1 cut(s)	705
BcnI	CCSGG	2 cut(s)	393, 969
BcoDI	GTCTC	3 cut(s)	659, 1740, 1992
BfaI	CTAG	5 cut(s)	846, 1245, 1947, 2384, 2588
BfmI	CTRYAG	2 cut(s)	462, 2515
BfoI	RGCGCY	3 cut(s)	69, 1001, 2228
BisI	GCNGC	5 cut(s)	679, 722, 1659, 2265, 2310
BlsI	GCNGC	5 cut(s)	680, 723, 1660, 2266, 2311
BmcAI	AGTACT	1 cut(s)	2258
Bme1390I	CCNGG	5 cut(s)	86, 393, 969, 1586, 2104
Bme18I	GGWCC	6 cut(s)	181, 245, 542, 692, 902, 2584
BmeRI	GACNNNNNGTC	1 cut(s)	2005
BmgT120I	GGNCC	9 cut(s)	167, 181, 245, 317, 542, 692, 902, 1376, 2584
BmiI	GGNNCC	8 cut(s)	182, 246, 305, 903, 1480, 1590, 2076, 2409
BmrFI	CCNGG	5 cut(s)	86, 393, 969, 1586, 2104
BmrI	ACTGGG	2 cut(s)	1287, 2634
BmsI	GCATC	3 cut(s)	406, 859, 2373
BmuI	ACTGGG	2 cut(s)	1287, 2634
BpiI	GAAGAC	1 cut(s)	2598
BpmI	CTGGAG	4 cut(s)	281, 443, 641, 1976
BpuEI	CTTGAG	2 cut(s)	1034, 1988
BpuMI	CCSGG	2 cut(s)	393, 969
BsaBI	GATNNNNATC	2 cut(s)	807, 1341
BsaHI	GRCGYC	1 cut(s)	1941
BsaI	GGTCTC	1 cut(s)	1992
BsaJI	CCNNGG	3 cut(s)	406, 968, 1935
BsaXI	ACNNNNNCTCC	4 cut(s)	463, 493, 2288, 2318
Bse118I	RCCGGY	1 cut(s)	611
Bse3DI	GCAATG	3 cut(s)	1066, 1078, 1298
Bse8I	GATNNNNATC	2 cut(s)	807, 1341
BseBI	CCWGG	3 cut(s)	86, 1586, 2104
BseDI	CCNNGG	3 cut(s)	406, 968, 1935
BseGI	GGATG	5 cut(s)	1609, 1867, 1920, 2236, 2497
BseJI	GATNNNNATC	2 cut(s)	807, 1341
BseMI	GCAATG	3 cut(s)	1066, 1078, 1298
BseMII	CTCAG	2 cut(s)	267, 1359
BseRI	GAGGAG	1 cut(s)	1933
BseSI	GKGCMC	1 cut(s)	2394
BseXI	GCAGC	3 cut(s)	733, 2251, 2321
BseYI	CCCAGC	3 cut(s)	1378, 2387, 2411
BsgI	GTGCAG	1 cut(s)	2380
BshNI	GGYRCC	1 cut(s)	1478
BsiHKAI	GWGCWC	2 cut(s)	132, 282
BsiSI	CCGG	5 cut(s)	393, 551, 612, 968, 986
BslFI	GGGAC	3 cut(s)	194, 1882, 2437
BsmAI	GTCTC	3 cut(s)	659, 1740, 1992
BsmFI	GGGAC	3 cut(s)	194, 1882, 2437
BsmI	GAATGC	2 cut(s)	460, 950
Bso31I	GGTCTC	1 cut(s)	1992
Bsp1286I	GDGCHC	3 cut(s)	132, 282, 2394
Bsp1407I	TGTACA	1 cut(s)	1189
Bsp143I	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
BspACI	CCGC	6 cut(s)	678, 681, 1659, 1698, 2378, 2525
BspCNI	CTCAG	2 cut(s)	268, 1360
BspLI	GGNNCC	8 cut(s)	182, 246, 305, 903, 1480, 1590, 2076, 2409
BspPI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1613
BspT107I	GGYRCC	1 cut(s)	1478
BspTNI	GGTCTC	1 cut(s)	1992
BsrBI	CCGCTC	1 cut(s)	1698
BsrDI	GCAATG	3 cut(s)	1066, 1078, 1298
BsrFI	RCCGGY	1 cut(s)	611
BsrGI	TGTACA	1 cut(s)	1189
BssAI	RCCGGY	1 cut(s)	611
BssECI	CCNNGG	3 cut(s)	406, 968, 1935
BssMI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
BssNAI	GTATAC	1 cut(s)	2609
BssNI	GRCGYC	1 cut(s)	1941
BssT1I	CCWWGG	2 cut(s)	406, 1935
Bst1107I	GTATAC	1 cut(s)	2609
Bst2UI	CCWGG	3 cut(s)	86, 1586, 2104
Bst4CI	ACNGT	6 cut(s)	177, 194, 486, 583, 1321, 2304
Bst6I	CTCTTC	2 cut(s)	620, 1562
BstACI	GRCGYC	1 cut(s)	1941
BstAUI	TGTACA	1 cut(s)	1189
BstC8I	GCNNGC	2 cut(s)	1708, 2109
BstDEI	CTNAG	6 cut(s)	276, 827, 1047, 1173, 1368, 2128
BstF5I	GGATG	5 cut(s)	1609, 1867, 1920, 2236, 2497
BstH2I	RGCGCY	3 cut(s)	69, 1001, 2228
BstHHI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2227
BstKTI	GATC	6 cut(s)	708, 805, 1066, 1273, 1472, 1621
BstMAI	GTCTC	3 cut(s)	659, 1740, 1992
BstMBI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 277, 851, 1254, 1526, 1716, 2203, 2375, 2384
BstNI	CCWGG	3 cut(s)	86, 1586, 2104
BstSCI	CCNGG	5 cut(s)	84, 391, 967, 1584, 2102
BstSFI	CTRYAG	2 cut(s)	462, 2515
BstSLI	GKGCMC	1 cut(s)	2394
BstV1I	GCAGC	3 cut(s)	733, 2251, 2321
BstV2I	GAAGAC	1 cut(s)	2598
BstX2I	RGATCY	3 cut(s)	802, 1270, 1618
BstXI	CCANNNNNNTGG	3 cut(s)	314, 830, 2581
BstYI	RGATCY	3 cut(s)	802, 1270, 1618
BstZ17I	GTATAC	1 cut(s)	2609
BtgZI	GCGATG	1 cut(s)	2350
BtsCI	GGATG	5 cut(s)	1609, 1867, 1920, 2236, 2497
BtsI	GCAGTG	4 cut(s)	1726, 1887, 2392, 2397
BtsIMutI	CAGTG	9 cut(s)	60, 173, 319, 1668, 1726, 1887, 2392, 2397, 2456
Cac8I	GCNNGC	2 cut(s)	1708, 2109
CaiI	CAGNNNCTG	3 cut(s)	232, 262, 490
CfoI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2227
Cfr10I	RCCGGY	1 cut(s)	611
Cfr13I	GGNCC	9 cut(s)	167, 181, 245, 317, 542, 692, 902, 1376, 2584
Csp6I	GTAC	7 cut(s)	190, 762, 1152, 1190, 1224, 1452, 2257
CviQI	GTAC	7 cut(s)	190, 762, 1152, 1190, 1224, 1452, 2257
DdeI	CTNAG	6 cut(s)	276, 827, 1047, 1173, 1368, 2128
DpnI	GATC	6 cut(s)	707, 804, 1065, 1272, 1471, 1620
DpnII	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
DraI	TTTAAA	1 cut(s)	2038
DriI	GACNNNNNGTC	1 cut(s)	2005
EaeI	YGGCCR	2 cut(s)	87, 2618
Eam1104I	CTCTTC	2 cut(s)	620, 1562
Eam1105I	GACNNNNNGTC	1 cut(s)	2005
EarI	CTCTTC	2 cut(s)	620, 1562
EciI	GGCGGA	1 cut(s)	696
Ecl136II	GAGCTC	2 cut(s)	130, 280
Eco130I	CCWWGG	2 cut(s)	406, 1935
Eco147I	AGGCCT	3 cut(s)	294, 411, 2242
Eco24I	GRGCYC	2 cut(s)	132, 282
Eco31I	GGTCTC	1 cut(s)	1992
Eco47I	GGWCC	6 cut(s)	181, 245, 542, 692, 902, 2584
Eco53kI	GAGCTC	2 cut(s)	130, 280
Eco57I	CTGAAG	3 cut(s)	1149, 1187, 2265
EcoICRI	GAGCTC	2 cut(s)	130, 280
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRI	GAATTC	2 cut(s)	121, 493
EcoRII	CCWGG	3 cut(s)	84, 1584, 2102
EcoT14I	CCWWGG	2 cut(s)	406, 1935
EcoT22I	ATGCAT	2 cut(s)	874, 952
EcoT38I	GRGCYC	2 cut(s)	132, 282
ErhI	CCWWGG	2 cut(s)	406, 1935
FaqI	GGGAC	3 cut(s)	194, 1882, 2437
FauI	CCCGC	1 cut(s)	2532
FbaI	TGATCA	1 cut(s)	705
FblI	GTMKAC	1 cut(s)	2608
Fnu4HI	GCNGC	5 cut(s)	679, 722, 1659, 2265, 2310
FokI	GGATG	5 cut(s)	1596, 1874, 1927, 2243, 2504
FriOI	GRGCYC	2 cut(s)	132, 282
Fsp4HI	GCNGC	5 cut(s)	679, 722, 1659, 2265, 2310
FspBI	CTAG	5 cut(s)	846, 1245, 1947, 2384, 2588
GlaI	GCGC	6 cut(s)	67, 501, 720, 984, 999, 2226
GluI	GCNGC	5 cut(s)	679, 722, 1659, 2265, 2310
GsaI	CCCAGC	3 cut(s)	1382, 2391, 2415
GsuI	CTGGAG	4 cut(s)	281, 443, 641, 1976
HaeII	RGCGCY	3 cut(s)	69, 1001, 2228
HapII	CCGG	5 cut(s)	393, 551, 612, 968, 986
HhaI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2227
Hin1I	GRCGYC	1 cut(s)	1941
Hin6I	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2225
HinP1I	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2225
HincII	GTYRAC	1 cut(s)	1315
HindII	GTYRAC	1 cut(s)	1315
HindIII	AAGCTT	2 cut(s)	1199, 1984
HpaII	CCGG	5 cut(s)	393, 551, 612, 968, 986
HphI	GGTGA	8 cut(s)	407, 508, 794, 1742, 2039, 2077, 2096, 2551
Hpy166II	GTNNAC	6 cut(s)	190, 471, 756, 959, 1315, 2609
Hpy188III	TCNNGA	8 cut(s)	106, 133, 298, 365, 422, 860, 1013, 2078
Hpy8I	GTNNAC	6 cut(s)	190, 471, 756, 959, 1315, 2609
Hpy99I	CGWCG	3 cut(s)	158, 577, 1946
HpyAV	CCTTC	7 cut(s)	37, 41, 235, 793, 1105, 1173, 2555
HpyCH4III	ACNGT	6 cut(s)	177, 194, 486, 583, 1321, 2304
HpyCH4IV	ACGT	3 cut(s)	1154, 1941, 2117
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 277, 851, 1254, 1526, 1716, 2203, 2375, 2384
HpyF3I	CTNAG	6 cut(s)	276, 827, 1047, 1173, 1368, 2128
HpySE526I	ACGT	3 cut(s)	1154, 1941, 2117
Hsp92I	GRCGYC	1 cut(s)	1941
HspAI	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2225
Ksp22I	TGATCA	1 cut(s)	705
Kzo9I	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
LmnI	GCTCC	6 cut(s)	135, 1507, 1594, 1695, 2080, 2203
Lsp1109I	GCAGC	3 cut(s)	733, 2251, 2321
LweI	GCATC	3 cut(s)	406, 859, 2373
MaeI	CTAG	5 cut(s)	846, 1245, 1947, 2384, 2588
MaeII	ACGT	3 cut(s)	1154, 1941, 2117
MaeIII	GTNAC	7 cut(s)	486, 1507, 1789, 2098, 2123, 2146, 2576
MalI	GATC	6 cut(s)	707, 804, 1065, 1272, 1471, 1620
MbiI	CCGCTC	1 cut(s)	1698
MboI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
MfeI	CAATTG	2 cut(s)	1494, 2373
MflI	RGATCY	3 cut(s)	802, 1270, 1618
MhlI	GDGCHC	3 cut(s)	132, 282, 2394
MlsI	TGGCCA	1 cut(s)	89
MluNI	TGGCCA	1 cut(s)	89
MlyI	GAGTC	4 cut(s)	661, 1168, 1742, 2630
MmeI	TCCRAC	2 cut(s)	309, 1002
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	2 cut(s)	874, 952
MroXI	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2569
MscI	TGGCCA	1 cut(s)	89
MslI	CAYNNNNRTG	2 cut(s)	312, 713
Msp20I	TGGCCA	1 cut(s)	89
MspI	CCGG	5 cut(s)	393, 551, 612, 968, 986
MspR9I	CCNGG	5 cut(s)	86, 393, 969, 1586, 2104
MunI	CAATTG	2 cut(s)	1494, 2373
Mva1269I	GAATGC	2 cut(s)	460, 950
MvaI	CCWGG	3 cut(s)	86, 1586, 2104
MwoI	GCNNNNNNNGC	9 cut(s)	65, 277, 851, 1254, 1526, 1716, 2203, 2375, 2384
NciI	CCSGG	2 cut(s)	393, 969
NdeII	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
NlaIV	GGNNCC	8 cut(s)	182, 246, 305, 903, 1480, 1590, 2076, 2409
NmeAIII	GCCGAG	1 cut(s)	540
NmuCI	GTSAC	3 cut(s)	1789, 2098, 2146
NsiI	ATGCAT	2 cut(s)	874, 952
PceI	AGGCCT	3 cut(s)	294, 411, 2242
PctI	GAATGC	2 cut(s)	460, 950
PdmI	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2569
PflMI	CCANNNNNTGG	2 cut(s)	898, 2260
PkrI	GCNGC	5 cut(s)	680, 723, 1660, 2266, 2311
PleI	GAGTC	4 cut(s)	660, 1167, 1741, 2630
PpsI	GAGTC	4 cut(s)	660, 1167, 1741, 2630
PpuMI	RGGWCCY	1 cut(s)	245
PsiI	TTATAA	2 cut(s)	1124, 1848
Psp124BI	GAGCTC	2 cut(s)	132, 282
Psp1406I	AACGTT	1 cut(s)	2117
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	3 cut(s)	84, 1584, 2102
PspFI	CCCAGC	3 cut(s)	1378, 2387, 2411
PspGI	CCWGG	3 cut(s)	84, 1584, 2102
PspN4I	GGNNCC	8 cut(s)	182, 246, 305, 903, 1480, 1590, 2076, 2409
PspPI	GGNCC	9 cut(s)	167, 181, 245, 317, 542, 692, 902, 1376, 2584
PspPPI	RGGWCCY	1 cut(s)	245
PstNI	CAGNNNCTG	3 cut(s)	232, 262, 490
PsuI	RGATCY	3 cut(s)	802, 1270, 1618
RsaI	GTAC	7 cut(s)	191, 763, 1153, 1191, 1225, 1453, 2258
RsaNI	GTAC	7 cut(s)	190, 762, 1152, 1190, 1224, 1452, 2257
RseI	CAYNNNNRTG	2 cut(s)	312, 713
SacI	GAGCTC	2 cut(s)	132, 282
SatI	GCNGC	5 cut(s)	679, 722, 1659, 2265, 2310
Sau3AI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
Sau96I	GGNCC	9 cut(s)	167, 181, 245, 317, 542, 692, 902, 1376, 2584
ScaI	AGTACT	1 cut(s)	2258
SchI	GAGTC	4 cut(s)	661, 1168, 1742, 2630
ScrFI	CCNGG	5 cut(s)	86, 393, 969, 1586, 2104
SduI	GDGCHC	3 cut(s)	132, 282, 2394
SfaNI	GCATC	3 cut(s)	406, 859, 2373
SfcI	CTRYAG	2 cut(s)	462, 2515
SinI	GGWCC	6 cut(s)	181, 245, 542, 692, 902, 2584
SmiMI	CAYNNNNRTG	2 cut(s)	312, 713
SmlI	CTYRAG	2 cut(s)	1013, 2003
SmoI	CTYRAG	2 cut(s)	1013, 2003
SseBI	AGGCCT	3 cut(s)	294, 411, 2242
SsiI	CCGC	6 cut(s)	678, 681, 1659, 1698, 2378, 2525
SspI	AATATT	2 cut(s)	1930, 2501
SspMI	CTAG	5 cut(s)	846, 1245, 1947, 2384, 2588
SstI	GAGCTC	2 cut(s)	132, 282
StuI	AGGCCT	3 cut(s)	294, 411, 2242
StyD4I	CCNGG	5 cut(s)	84, 391, 967, 1584, 2102
StyI	CCWWGG	2 cut(s)	406, 1935
TaaI	ACNGT	6 cut(s)	177, 194, 486, 583, 1321, 2304
TaiI	ACGT	3 cut(s)	1157, 1944, 2120
TatI	WGTACW	3 cut(s)	189, 1189, 2256
TauI	GCSGC	2 cut(s)	681, 1661
TscAI	CASTG	9 cut(s)	60, 180, 319, 1675, 1726, 1887, 2399, 2404, 2463
TseFI	GTSAC	3 cut(s)	1789, 2098, 2146
TseI	GCWGC	3 cut(s)	721, 2264, 2309
Tsp45I	GTSAC	3 cut(s)	1789, 2098, 2146
TspDTI	ATGAA	9 cut(s)	731, 886, 1343, 1389, 1598, 1955, 1978, 2357, 2511
TspGWI	ACGGA	2 cut(s)	534, 1442
TspRI	CASTG	9 cut(s)	60, 180, 319, 1675, 1726, 1887, 2399, 2404, 2463
Van91I	CCANNNNNTGG	2 cut(s)	898, 2260
VpaK11BI	GGWCC	6 cut(s)	181, 245, 542, 692, 902, 2584
XapI	RAATTY	6 cut(s)	121, 493, 618, 877, 1307, 1798
XmiI	GTMKAC	1 cut(s)	2608
XmnI	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2569
XspI	CTAG	5 cut(s)	846, 1245, 1947, 2384, 2588
ZraI	GACGTC	1 cut(s)	1942
ZrmI	AGTACT	1 cut(s)	2258
Zsp2I	ATGCAT	2 cut(s)	874, 952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.