Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009168.1

Orthogroup ID

OG0003268

Physical Location & Seq

Genomic Coordinates Forward (+)

19561 .. 22940

Gene Structure 3380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009168.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

atggaacaccctaaccttgttacacccttccttcttctcctttccctcctttcagtggctttcagcgccacagaccctaatgacctggccattctcaaccagttcaagaagaacatggagaattccgagctcttgaactggccggataatggcgacgacccttgtggccctccaatgtgggaccatgtgttctgttctggtgatagggtttcccagattcaggttcagaagctgggcttgaagggtcctctgccccagaacctcaaccagctctctgagctctccaacataggcctccagaggaaccagttcagtgggcctttgcctactctcaaaggcttgtccaaattgaagtatgcttttcttgattacaacgatttcagttctattcccggtgattttttcgaaggccttgatgctctggaggtcttggcattggatggcttggatttgaatgccactacagggtggacattccctccacagttactgaattcggcgcagctgcagaatctgacctgtgggagttgcaatctggttggtccgttgccggattttctcggcaacctttcgtcgctcactgtgttagagctttcagggaatggtttgaccggcgaaattccgaagagttatactggccttaacttgcagagtctccagttgaacaatccgaaaggcgggggaatgagtggtcctattgatgtgatcacaacaatggcgcagctcaacttggcttggcttcatgggaatcagttcacaggtactatcccggacagcattggtaatttggtttctttgaaggatcttaatctgaatcaaaaccaacttggtggtgtggttcctgatagtttggctaatctggaacttgatacattgaatttgaacaataaccatttcatgggtccagtaccagagtttaaggcaaagaatgtgagttatgattcaaatgcattctgtttaggaactccggggcatccttgtgcgccggaggttatggcgcttatagggttccttgaggggttggatttccctgcaacacttgcttctaagtggtctggtaatgatccttgcaacgagtcatggttgggagtgagttgtggcaacaatgggaaggtgtctgttataaatttgcccaagtataatctcaatggtacattgagtccttcagttgctaagttagcttctcttgttcagattaagcttcagaataaccatttgacgggtccaattcctcccaactggactcgcttgaaagccctgataatgctggatctaactgggaatgatattagccctccattgccaaaatttgtcaacaccgttaaagtggtcattgatgggaatcctttgtttcatggtaatccatctgagcaaggcccagcaccagagaataattcttcatcaacgaccaacccatcttccccaacagacacaagttctaatgggaatggtacttctcaatcgaaaggatcaaaaggaaccaacatagtttcaattgttgctcctgttacaagtgttgctgttgttgctttgcttgtaattcctttatccatctactattgtaagaagagaagaactcgcttccaggctccaagttcccttgtaattcatccaagagatccatctgattcagataacacggttaagattgtcgttgccgctaataccgctggaagcacttctacccgcacggggagcggttctgcaagcagaaacagcagtgggataggtgagtctcatgtcattgaagctggaaatctcgtcatatcagttcaagttcttcggaatgtgacaaagaattttgcttctgaaaatgagcttggtcgtggtggttttggggttgtttataagggagaattggatgatgggacaaaaatagcagtgaaaagaatggaggcaggtgtgattagcaacaaagccttggatgaattccagtccgaaattgcagttctttcaaaggtccgacaccgtcatttggtatcactgttgggttattctgttgcaggaaatgagagaatgcttgtgtatgaatatatgcctcaaggggcactgagcaggcatctttttcattggaaaacctttaaactagaacctctctcttggatgaggaggctaaatattgccttggacgtcgctagggggctggagtatcttcataatcttgcacaccaaagcttcatacacagagacctcaagtcatcaaacatcttacttggtgatgattttaaagcaaaaatatcagattttggattggtgaaactggctcctgatggtgaaaaatctgttgtgaccaggcttgctggaacatttggttacttagcaccagagtatgctgtgacaggaaaaattacaaccaaagtagatgtattcagttttggggttgtgctaatggagctactaactggaatgatggcgctggatgatgataggcctgaagaaagccagtacttggctgcatggttctggcacatcaaatcaaataaggagaaactgttggcggccattgacccaacccttgatataaaagacatgaaagaagaaacatttgagagcatagccacaattgcggaactagctggtcactgcactgcaagggaacccagccaaagaccagatatgggtcatgctgtgaatgtattgtccccactggttgaaaaatggaaaccatttaatgatgaggatgatgaatattctggcatagactacagcctcccgcttaaccagatggtgaaaggttggcaggaagcagaaggaaaggattccagttacatggacctagaagacagcaagagcagtataccagcacggccaactgggtttgcagactcttttacttcagctgatggtcggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

950

Amino Acids

102.81

Weight (kDa)

5.35

Isoelectric Point (pI)

31.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003268)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g26630 FvH4_3g26630 FvH4_6g20300
malus_domestica	MD03G1154600.v1.1 MD12G1040200.v1.1 MD14G1038700.v1.1
prunus_persica	Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.7G094700_v2.0.a1
pyrus_communis	pycom03g10840 pycom12g03440 pycom14g03340
rosa_chinensis	RchiOBHm_Chr3g0475921 RchiOBHm_Chr5g0048201
rosa_laevigata	RLG00000023801 RLG00000034502
rosa_multiflora	Rmu_sc0001408.1_g000015 Rmu_sc0009168.1_g000004
rosa_roxburghii	Rroxscaffold_1G00033720 Rroxscaffold_6G00405730
rosa_rugosa	Rorug03G0151900 Rorug05G0237000 Rorug05G0237100
rosa_samantha	Rh3AG202700 Rh3BG232600 Rh3CG228000 Rh3DG228200 Rh5AG316200 Rh5BG326800 Rh5CG353000 Rh5DG337800
rosa_wichuraiana	Rw3G018440 Rw5G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1124, 1848
AarI	CACCTGC	1 cut(s)	1889
AatII	GACGTC	1 cut(s)	2133
Acc36I	ACCTGC	1 cut(s)	1889
AccB7I	CCANNNNNTGG	2 cut(s)	898, 2449
AccBSI	CCGCTC	1 cut(s)	1698
AccI	GTMKAC	1 cut(s)	2797
AciI	CCGC	8 cut(s)	678, 1659, 1668, 1687, 1698, 2498, 2567, 2714
AclWI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1613
AcoI	YGGCCR	4 cut(s)	87, 140, 2499, 2807
AcsI	RAATTY	8 cut(s)	121, 493, 618, 877, 1126, 1307, 1798, 1928
AcuI	CTGAAG	4 cut(s)	1149, 1187, 2454, 2820
AcyI	GRCGYC	1 cut(s)	2130
AfaI	GTAC	5 cut(s)	763, 909, 1153, 1453, 2447
AhdI	GACNNNNNGTC	1 cut(s)	2194
AjnI	CCWGG	3 cut(s)	84, 1584, 2291
AjuI	GAANNNNNNNTTGG	2 cut(s)	1803, 1835
AloI	GAACNNNNNNTCC	2 cut(s)	173, 205
Alw21I	GWGCWC	2 cut(s)	132, 282
Alw26I	GTCTC	3 cut(s)	659, 1740, 2181
AlwI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1613
AlwNI	CAGNNNCTG	3 cut(s)	232, 490, 514
ApeKI	GCWGC	4 cut(s)	502, 505, 721, 2453
ApoI	RAATTY	8 cut(s)	121, 493, 618, 877, 1126, 1307, 1798, 1928
Asp700I	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2758
AspLEI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2416
AsuC2I	CCSGG	3 cut(s)	393, 770, 969
AsuHPI	GGTGA	7 cut(s)	212, 407, 1742, 2228, 2266, 2285, 2740
AsuII	TTCGAA	1 cut(s)	405
AvaII	GGWCC	8 cut(s)	181, 245, 542, 692, 902, 1223, 1960, 2773
BaeGI	GKGCMC	1 cut(s)	2050
BalI	TGGCCA	1 cut(s)	89
BanII	GRGCYC	2 cut(s)	132, 282
BarI	GAAGNNNNNNTAC	2 cut(s)	1666, 1698
BbsI	GAAGAC	1 cut(s)	2787
Bbv12I	GWGCWC	2 cut(s)	132, 282
BbvI	GCAGC	4 cut(s)	492, 514, 733, 2440
BceAI	ACGGC	1 cut(s)	2822
BciT130I	CCWGG	3 cut(s)	86, 1586, 2293
BclI	TGATCA	1 cut(s)	705
BcnI	CCSGG	3 cut(s)	393, 770, 969
BcoDI	GTCTC	3 cut(s)	659, 1740, 2181
BfaI	CTAG	4 cut(s)	2087, 2136, 2573, 2777
BfmI	CTRYAG	3 cut(s)	462, 506, 2704
BfoI	RGCGCY	3 cut(s)	69, 1001, 2417
BfuAI	ACCTGC	1 cut(s)	1889
BisI	GCNGC	6 cut(s)	503, 506, 722, 1659, 2454, 2499
BlsI	GCNGC	6 cut(s)	504, 507, 723, 1660, 2455, 2500
BmcAI	AGTACT	1 cut(s)	2447
Bme1390I	CCNGG	6 cut(s)	86, 393, 770, 969, 1586, 2293
Bme18I	GGWCC	8 cut(s)	181, 245, 542, 692, 902, 1223, 1960, 2773
BmeRI	GACNNNNNGTC	1 cut(s)	2194
BmrFI	CCNGG	6 cut(s)	86, 393, 770, 969, 1586, 2293
BmrI	ACTGGG	2 cut(s)	1287, 2823
BmsI	GCATC	3 cut(s)	406, 982, 2068
BmuI	ACTGGG	2 cut(s)	1287, 2823
BpiI	GAAGAC	1 cut(s)	2787
BplI	GAGNNNNNCTC	2 cut(s)	1561, 1593
BpmI	CTGGAG	4 cut(s)	281, 443, 641, 2165
Bpu14I	TTCGAA	1 cut(s)	405
BpuEI	CTTGAG	3 cut(s)	1034, 2025, 2177
BpuMI	CCSGG	3 cut(s)	393, 770, 969
BsaBI	GATNNNNATC	2 cut(s)	807, 1341
BsaHI	GRCGYC	1 cut(s)	2130
BsaI	GGTCTC	1 cut(s)	2181
BsaJI	CCNNGG	3 cut(s)	968, 1920, 2124
BsaXI	ACNNNNNCTCC	4 cut(s)	463, 493, 2477, 2507
Bse118I	RCCGGY	1 cut(s)	611
Bse3DI	GCAATG	1 cut(s)	1298
Bse8I	GATNNNNATC	2 cut(s)	807, 1341
BseBI	CCWGG	3 cut(s)	86, 1586, 2293
BseDI	CCNNGG	3 cut(s)	968, 1920, 2124
BseGI	GGATG	8 cut(s)	445, 973, 1609, 1867, 1930, 2109, 2425, 2686
BseJI	GATNNNNATC	2 cut(s)	807, 1341
BseMI	GCAATG	1 cut(s)	1298
BseMII	CTCAG	3 cut(s)	267, 1359, 2042
BseRI	GAGGAG	1 cut(s)	2122
BseSI	GKGCMC	1 cut(s)	2050
BseXI	GCAGC	4 cut(s)	492, 514, 733, 2440
BseYI	CCCAGC	3 cut(s)	232, 1378, 2600
BsgI	GTGCAG	1 cut(s)	2569
BsiHKAI	GWGCWC	2 cut(s)	132, 282
BsiSI	CCGG	7 cut(s)	143, 393, 551, 612, 770, 968, 986
BslFI	GGGAC	3 cut(s)	194, 1882, 2626
BsmAI	GTCTC	3 cut(s)	659, 1740, 2181
BsmFI	GGGAC	3 cut(s)	194, 1882, 2626
BsmI	GAATGC	3 cut(s)	460, 950, 2022
Bso31I	GGTCTC	1 cut(s)	2181
Bsp119I	TTCGAA	1 cut(s)	405
Bsp1286I	GDGCHC	3 cut(s)	132, 282, 2050
Bsp143I	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
BspACI	CCGC	8 cut(s)	678, 1659, 1668, 1687, 1698, 2498, 2567, 2714
BspCNI	CTCAG	3 cut(s)	268, 1360, 2043
BspMAI	CTGCAG	1 cut(s)	510
BspMI	ACCTGC	1 cut(s)	1889
BspPI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1613
BspT104I	TTCGAA	1 cut(s)	405
BspTNI	GGTCTC	1 cut(s)	2181
BsrBI	CCGCTC	1 cut(s)	1698
BsrDI	GCAATG	1 cut(s)	1298
BsrFI	RCCGGY	1 cut(s)	611
BssAI	RCCGGY	1 cut(s)	611
BssECI	CCNNGG	3 cut(s)	968, 1920, 2124
BssMI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
BssNAI	GTATAC	1 cut(s)	2798
BssNI	GRCGYC	1 cut(s)	2130
BssT1I	CCWWGG	2 cut(s)	1920, 2124
Bst1107I	GTATAC	1 cut(s)	2798
Bst2UI	CCWGG	3 cut(s)	86, 1586, 2293
Bst4CI	ACNGT	7 cut(s)	486, 583, 1321, 1642, 1970, 1986, 2493
Bst6I	CTCTTC	2 cut(s)	620, 1562
BstACI	GRCGYC	1 cut(s)	2130
BstAPI	GCANNNNNTGC	1 cut(s)	1040
BstBI	TTCGAA	1 cut(s)	405
BstC8I	GCNNGC	3 cut(s)	1708, 2057, 2298
BstDEI	CTNAG	6 cut(s)	276, 1047, 1173, 1368, 2051, 2317
BstF5I	GGATG	8 cut(s)	445, 973, 1609, 1867, 1930, 2109, 2425, 2686
BstH2I	RGCGCY	3 cut(s)	69, 1001, 2417
BstHHI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2416
BstKTI	GATC	6 cut(s)	708, 805, 1066, 1273, 1472, 1621
BstMAI	GTCTC	3 cut(s)	659, 1740, 2181
BstMBI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
BstNI	CCWGG	3 cut(s)	86, 1586, 2293
BstSCI	CCNGG	6 cut(s)	84, 391, 768, 967, 1584, 2291
BstSFI	CTRYAG	3 cut(s)	462, 506, 2704
BstSLI	GKGCMC	1 cut(s)	2050
BstV1I	GCAGC	4 cut(s)	492, 514, 733, 2440
BstV2I	GAAGAC	1 cut(s)	2787
BstX2I	RGATCY	3 cut(s)	802, 1270, 1618
BstXI	CCANNNNNNTGG	3 cut(s)	314, 830, 2770
BstYI	RGATCY	3 cut(s)	802, 1270, 1618
BstZ17I	GTATAC	1 cut(s)	2798
BtsCI	GGATG	8 cut(s)	445, 973, 1609, 1867, 1930, 2109, 2425, 2686
BtsI	GCAGTG	4 cut(s)	1726, 1887, 2581, 2586
BveI	ACCTGC	1 cut(s)	1889
Cac8I	GCNNGC	3 cut(s)	1708, 2057, 2298
CaiI	CAGNNNCTG	3 cut(s)	232, 490, 514
CfoI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2416
Cfr10I	RCCGGY	1 cut(s)	611
Csp6I	GTAC	5 cut(s)	762, 908, 1152, 1452, 2446
CviQI	GTAC	5 cut(s)	762, 908, 1152, 1452, 2446
DdeI	CTNAG	6 cut(s)	276, 1047, 1173, 1368, 2051, 2317
DpnI	GATC	6 cut(s)	707, 804, 1065, 1272, 1471, 1620
DpnII	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
DraI	TTTAAA	2 cut(s)	2083, 2227
DriI	GACNNNNNGTC	1 cut(s)	2194
EaeI	YGGCCR	4 cut(s)	87, 140, 2499, 2807
Eam1104I	CTCTTC	2 cut(s)	620, 1562
Eam1105I	GACNNNNNGTC	1 cut(s)	2194
EarI	CTCTTC	2 cut(s)	620, 1562
Ecl136II	GAGCTC	2 cut(s)	130, 280
Eco130I	CCWWGG	2 cut(s)	1920, 2124
Eco147I	AGGCCT	3 cut(s)	294, 411, 2431
Eco24I	GRGCYC	2 cut(s)	132, 282
Eco31I	GGTCTC	1 cut(s)	2181
Eco47I	GGWCC	8 cut(s)	181, 245, 542, 692, 902, 1223, 1960, 2773
Eco53kI	GAGCTC	2 cut(s)	130, 280
Eco57I	CTGAAG	4 cut(s)	1149, 1187, 2454, 2820
EcoICRI	GAGCTC	2 cut(s)	130, 280
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRI	GAATTC	3 cut(s)	121, 493, 1928
EcoRII	CCWGG	3 cut(s)	84, 1584, 2291
EcoT14I	CCWWGG	2 cut(s)	1920, 2124
EcoT22I	ATGCAT	1 cut(s)	952
EcoT38I	GRGCYC	2 cut(s)	132, 282
ErhI	CCWWGG	2 cut(s)	1920, 2124
FalI	AAGNNNNNCTT	2 cut(s)	221, 253
FaqI	GGGAC	3 cut(s)	194, 1882, 2626
FauI	CCCGC	3 cut(s)	671, 1694, 2721
FbaI	TGATCA	1 cut(s)	705
FblI	GTMKAC	1 cut(s)	2797
Fnu4HI	GCNGC	6 cut(s)	503, 506, 722, 1659, 2454, 2499
FokI	GGATG	8 cut(s)	452, 960, 1596, 1874, 1937, 2116, 2432, 2693
FriOI	GRGCYC	2 cut(s)	132, 282
Fsp4HI	GCNGC	6 cut(s)	503, 506, 722, 1659, 2454, 2499
FspBI	CTAG	4 cut(s)	2087, 2136, 2573, 2777
GlaI	GCGC	6 cut(s)	67, 501, 720, 984, 999, 2415
GluI	GCNGC	6 cut(s)	503, 506, 722, 1659, 2454, 2499
GsaI	CCCAGC	3 cut(s)	236, 1382, 2604
GsuI	CTGGAG	4 cut(s)	281, 443, 641, 2165
HaeII	RGCGCY	3 cut(s)	69, 1001, 2417
HapII	CCGG	7 cut(s)	143, 393, 551, 612, 770, 968, 986
HhaI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2416
Hin1I	GRCGYC	1 cut(s)	2130
Hin6I	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2414
HinP1I	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2414
HincII	GTYRAC	1 cut(s)	1315
HindII	GTYRAC	1 cut(s)	1315
HindIII	AAGCTT	2 cut(s)	1199, 2173
HpaII	CCGG	7 cut(s)	143, 393, 551, 612, 770, 968, 986
HphI	GGTGA	7 cut(s)	212, 407, 1742, 2228, 2266, 2285, 2740
Hpy166II	GTNNAC	4 cut(s)	471, 756, 1315, 2798
Hpy188III	TCNNGA	8 cut(s)	106, 133, 298, 365, 422, 842, 860, 2267
Hpy8I	GTNNAC	4 cut(s)	471, 756, 1315, 2798
Hpy99I	CGWCG	3 cut(s)	158, 577, 2135
HpyAV	CCTTC	8 cut(s)	37, 41, 235, 401, 793, 1105, 1173, 2744
HpyCH4III	ACNGT	7 cut(s)	486, 583, 1321, 1642, 1970, 1986, 2493
HpyCH4IV	ACGT	1 cut(s)	2130
HpyF3I	CTNAG	6 cut(s)	276, 1047, 1173, 1368, 2051, 2317
HpySE526I	ACGT	1 cut(s)	2130
Hsp92I	GRCGYC	1 cut(s)	2130
HspAI	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2414
Ksp22I	TGATCA	1 cut(s)	705
Kzo9I	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
LmnI	GCTCC	5 cut(s)	1507, 1594, 1695, 2269, 2392
Lsp1109I	GCAGC	4 cut(s)	492, 514, 733, 2440
LweI	GCATC	3 cut(s)	406, 982, 2068
MaeI	CTAG	4 cut(s)	2087, 2136, 2573, 2777
MaeII	ACGT	1 cut(s)	2130
MaeIII	GTNAC	9 cut(s)	19, 486, 1507, 1789, 2287, 2312, 2335, 2579, 2765
MalI	GATC	6 cut(s)	707, 804, 1065, 1272, 1471, 1620
MbiI	CCGCTC	1 cut(s)	1698
MboI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
MfeI	CAATTG	2 cut(s)	1494, 2562
MflI	RGATCY	3 cut(s)	802, 1270, 1618
MhlI	GDGCHC	3 cut(s)	132, 282, 2050
MlsI	TGGCCA	1 cut(s)	89
MluNI	TGGCCA	1 cut(s)	89
MlyI	GAGTC	6 cut(s)	661, 1085, 1168, 1237, 1742, 2819
MmeI	TCCRAC	3 cut(s)	309, 1002, 1987
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	1 cut(s)	952
MroXI	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2758
MscI	TGGCCA	1 cut(s)	89
MslI	CAYNNNNRTG	2 cut(s)	713, 978
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	3 cut(s)	505, 1670, 2840
MspI	CCGG	7 cut(s)	143, 393, 551, 612, 770, 968, 986
MspR9I	CCNGG	6 cut(s)	86, 393, 770, 969, 1586, 2293
MunI	CAATTG	2 cut(s)	1494, 2562
Mva1269I	GAATGC	3 cut(s)	460, 950, 2022
MvaI	CCWGG	3 cut(s)	86, 1586, 2293
NciI	CCSGG	3 cut(s)	393, 770, 969
NdeII	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
NmeAIII	GCCGAG	1 cut(s)	540
NmuCI	GTSAC	4 cut(s)	1789, 2287, 2335, 2579
NsiI	ATGCAT	1 cut(s)	952
NspV	TTCGAA	1 cut(s)	405
PaqCI	CACCTGC	1 cut(s)	1889
PceI	AGGCCT	3 cut(s)	294, 411, 2431
PctI	GAATGC	3 cut(s)	460, 950, 2022
PdmI	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2758
PfeI	GAWTC	8 cut(s)	217, 511, 748, 814, 941, 1342, 1628, 2759
PflFI	GACNNNGTC	1 cut(s)	1968
PflMI	CCANNNNNTGG	2 cut(s)	898, 2449
PfoI	TCCNGGA	1 cut(s)	768
PkrI	GCNGC	6 cut(s)	504, 507, 723, 1660, 2455, 2500
PleI	GAGTC	6 cut(s)	660, 1084, 1167, 1237, 1741, 2819
PpsI	GAGTC	6 cut(s)	660, 1084, 1167, 1237, 1741, 2819
PpuMI	RGGWCCY	1 cut(s)	245
PsiI	TTATAA	2 cut(s)	1124, 1848
Psp124BI	GAGCTC	2 cut(s)	132, 282
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	3 cut(s)	84, 1584, 2291
PspFI	CCCAGC	3 cut(s)	232, 1378, 2600
PspGI	CCWGG	3 cut(s)	84, 1584, 2291
PspPPI	RGGWCCY	1 cut(s)	245
PstI	CTGCAG	1 cut(s)	510
PstNI	CAGNNNCTG	3 cut(s)	232, 490, 514
PsuI	RGATCY	3 cut(s)	802, 1270, 1618
PsyI	GACNNNGTC	1 cut(s)	1968
PvuII	CAGCTG	2 cut(s)	505, 2840
RsaI	GTAC	5 cut(s)	763, 909, 1153, 1453, 2447
RsaNI	GTAC	5 cut(s)	762, 908, 1152, 1452, 2446
RseI	CAYNNNNRTG	2 cut(s)	713, 978
SacI	GAGCTC	2 cut(s)	132, 282
SatI	GCNGC	6 cut(s)	503, 506, 722, 1659, 2454, 2499
Sau3AI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1618
ScaI	AGTACT	1 cut(s)	2447
SchI	GAGTC	6 cut(s)	661, 1085, 1168, 1237, 1742, 2819
ScrFI	CCNGG	6 cut(s)	86, 393, 770, 969, 1586, 2293
SduI	GDGCHC	3 cut(s)	132, 282, 2050
SfaNI	GCATC	3 cut(s)	406, 982, 2068
SfcI	CTRYAG	3 cut(s)	462, 506, 2704
SfuI	TTCGAA	1 cut(s)	405
SinI	GGWCC	8 cut(s)	181, 245, 542, 692, 902, 1223, 1960, 2773
SmiMI	CAYNNNNRTG	2 cut(s)	713, 978
SmlI	CTYRAG	3 cut(s)	1013, 2040, 2192
SmoI	CTYRAG	3 cut(s)	1013, 2040, 2192
SseBI	AGGCCT	3 cut(s)	294, 411, 2431
SsiI	CCGC	8 cut(s)	678, 1659, 1668, 1687, 1698, 2498, 2567, 2714
SspI	AATATT	2 cut(s)	2119, 2690
SspMI	CTAG	4 cut(s)	2087, 2136, 2573, 2777
SstI	GAGCTC	2 cut(s)	132, 282
StuI	AGGCCT	3 cut(s)	294, 411, 2431
StyD4I	CCNGG	6 cut(s)	84, 391, 768, 967, 1584, 2291
StyI	CCWWGG	2 cut(s)	1920, 2124
TaaI	ACNGT	7 cut(s)	486, 583, 1321, 1642, 1970, 1986, 2493
TaiI	ACGT	1 cut(s)	2133
TaqI	TCGA	2 cut(s)	405, 1463
TatI	WGTACW	1 cut(s)	2445
TauI	GCSGC	2 cut(s)	1661, 2501
TfiI	GAWTC	8 cut(s)	217, 511, 748, 814, 941, 1342, 1628, 2759
TseFI	GTSAC	4 cut(s)	1789, 2287, 2335, 2579
TseI	GCWGC	4 cut(s)	502, 505, 721, 2453
Tsp45I	GTSAC	4 cut(s)	1789, 2287, 2335, 2579
TspGWI	ACGGA	1 cut(s)	534
Tth111I	GACNNNGTC	1 cut(s)	1968
Van91I	CCANNNNNTGG	2 cut(s)	898, 2449
VpaK11BI	GGWCC	8 cut(s)	181, 245, 542, 692, 902, 1223, 1960, 2773
XapI	RAATTY	8 cut(s)	121, 493, 618, 877, 1126, 1307, 1798, 1928
XmiI	GTMKAC	1 cut(s)	2797
XmnI	GAANNNNTTC	4 cut(s)	308, 752, 1678, 2758
XspI	CTAG	4 cut(s)	2087, 2136, 2573, 2777
ZraI	GACGTC	1 cut(s)	2131
ZrmI	AGTACT	1 cut(s)	2447
Zsp2I	ATGCAT	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.