Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0003268

Physical Location & Seq

Genomic Coordinates Reverse (-)

20501960 .. 20505338

Gene Structure 3379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G018440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2799 bp

ATGGAACACCCGAACCTTGTTACACCCTTCCTTCTTCTCCTTTCCCTCCTTTCAGTGGCTTTCAGCGCCACAGACCCTAATGACCTGGCCATTCTCAACCAGTTCAAGAAGAACATGGAGAATTCCGAGCTCTTGAACTGGCCTGATAATGGCGACGACCCTTGTGGCCCTCCAATGTGGGACCATGTGTTCTGTTCTGGTGATAGGGTTTCCCAGATTCAGGTTCAGAAGCTGGGATTGAAGGGTCCTCTGCCCCAGAACCTCAACCAGCTCTCTGAGCTCTCCAACATAGGCCTCCAGAGGAACCAGTTCAGTGGGCCTTTGCCTACTCTCAAAGGCTTGTCCAAATTGAAGTATGCTTTTCTTGATTACAACGATTTCAGTTCTATTCCCGGTGATTTTTTCGAAGGCCTTGATGCTCTGGAGGTTCTGGCATTGGATGGCTTGGATTTGAATGCCACTACAGGGTGGACATTCCCTCCACAGTTACTGAATTCGGCGCAGCTGCAGAATCTGACCTGTGGGAGTTGCAATCTGGCTGGTCCGTTGCCGGATTTTCTCGGCAACCTTTCGTCGCTCACTGTGTTAGAGCTTTCAGGGAATGGTTTGACCGGCGAAATTCCGAAGAGTTATACTGGCCTTAACTTGCAGAGTCTGCAGTTGAACAATCCGAAAGGCGGGGGAATGAGTGGTCCTATTGATGTGATCACAACAATGGCGCAGCTCAACTTGGCTTGGCTTCATGGGAATCAGTTCACAGGTACTATCCCGGACAGCATTGGTAATTTGGTTTCTTTGAAGGATCTTAATCTGAATCAAAACCAACTTGGTGGTGTGATTCCTGATAGTTTGGCTAATCTGGAACTTGATACATTGAATTTGAACAATAACCATTTCATGGGTCCAGTACCAGAGTTTAAGGCAAAGAATGTGAGTTATGATTCAAATGCATTCTGTTTACGAACTCCGGGGCTTCCTTGTGCGCCGGAGGTTATGGCGCTTATAGGGTTCCTTGAGGGGTTGGATTTCCCTGCAACACTTGCTTCTAAGTGGTCTGGTAATGATCCTTGCAATGAGTCATGGTTGGGAGTGAGTTGTGGCAACAATGGGAAGGTGTCTGTTATAAATTTGCCCAAGTATAATCTCAATGGTACGTTGAGTCCTTCGGTTGCTAAGTTAGATTCTCTTGTTCAGATTAAGCTTCAGAATAACCATTTGACGGGTACAATTCCTCCCAACTGGACTCGCTTGAAAGCCCTGATAATGCTGGATCTAACTGGGAATGATATTAGCCCTCCATTGCCAAAATTTGTCAACACCGTTAAAGTGGTCATTGATGGGAATCCTTTGTTTCATGGTAATCCATCTGAGCAAGGCCCAGCACCAGAGAATAATTCTTCATCAACGACCAACCCATCTTCCCCAACAGACACAAGTTCTAATGGGAATGGTACTTCTCAATCGAAAGGATCAAAAGGAACCAACATAGTTTCAATTGTTGCTCCGTTACAAAAGAGAAGAACTCGCTTCCAGGCTCCAAGTTCCCTTGTAATTCATCCAAGAGATCCATCTGATTCAGATAACACGGTTAAGATTGTCGTTGCCGCTAATACCGCTGGAAGCACTTCTACCCTCACGGGGAGCGGTTCTGCAAGCAGAAACAGCAGTGGGATAGGTGAGTCTCATGTCATTGAAGCTGGAAATCTCGTCATATCAGTTCAAGTTCTTCGGAATGTGACAAAGAATTTTGCTTCTGAAAATGAGCTTGGTCGTGGTGGTTTTGGGGTTGTTTATAAGGGAGAATTGGATGATGGGACAAAAATAGCAGTGAAAAGAATGGAGGCAGGTGTGATTAGCAACAAAGCCTTGGATGAATTCCAGTCCGAAATTGCAGTTCTTTCAAAGGTCCGACACCGTCATTTGGTATCACTGTTGGGTTATTCTGTTGCAGGAAATGAGAGAATGCTTGTGTATGAATATATGCCTCAAGGGGCACTGAGCAGGCATCTTTTTCATTGGAAAACCTTTAAACTAGAACCTCTCTCTTGGATGAGGAGGCTAAATATTGCCTTGGACGTCGCTAGGGGGCTGGAGTATCTTCATAATCTTGCACACCAAAGCTTCATACACAGAGACCTCAAGTCATCAAACATCTTACTTGGTGATGATTTTAAAGCAAAAATATCAGATTTTGGATTGGTGAAACTGGCTCCTGATGGTGAAAAATCTGTTGTGACCAGGCTTGCTGGAACATTTGGTTACTTAGCACCAGAGTATGCTGTGACAGGAAAAATTACAACCAAAGTAGATGTATTCAGTTTTGGGGTTGTGCTAATGGAGCTATTAACTGGAATGATGGCGCTGGATGATGATAGGCCTGAAGAAAGCCAGTACTTGGCTGCATGGTTCTGGCACATCAAATCAAATAAGGAGAAACTGTTGGCGGCCATTGACCCAACCCTTGATATAAAAGACATGAAAGAAGAAACATTTGAGAGCATAGCCACAATTGCGGAACTAGCTGGTCACTGCACTGCAAGGGAACCCGGCCAAAGACCAGATATGGGTCATGCTGTGAATGTATTGTCCCCACTGGTTGAAAAATGGAAACCATTTAATGATGAGGATGATGAATATTCTGGCATAGACTACAGCCTCCCGCTTAACCAGATGGTGAAAGGTTGGCAGGAAGCAGAAGGAAAGGATTCCAGTTACATGGACCTAGAAGACAGCAAGAGCAGTATACCAGCACGGCCAACTGGGTTTGCAGACTCTTTTACTTCAGCTGATGGTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

932

Amino Acids

100.96

Weight (kDa)

5.23

Isoelectric Point (pI)

32.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 66	9.1e-06	Leucine rich repeat N-terminal domain
Pkinase	PF00069	584 - 859	3.4e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	586 - 859	8.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003268)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g26630 FvH4_3g26630 FvH4_6g20300
malus_domestica	MD03G1154600.v1.1 MD12G1040200.v1.1 MD14G1038700.v1.1
prunus_persica	Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.6G143800_v2.0.a1 Prupe.7G094700_v2.0.a1
pyrus_communis	pycom03g10840 pycom12g03440 pycom14g03340
rosa_chinensis	RchiOBHm_Chr3g0475921 RchiOBHm_Chr5g0048201
rosa_laevigata	RLG00000023801 RLG00000034502
rosa_multiflora	Rmu_sc0001408.1_g000015 Rmu_sc0009168.1_g000004
rosa_roxburghii	Rroxscaffold_1G00033720 Rroxscaffold_6G00405730
rosa_rugosa	Rorug03G0151900 Rorug05G0237000 Rorug05G0237100
rosa_samantha	Rh3AG202700 Rh3BG232600 Rh3CG228000 Rh3DG228200 Rh5AG316200 Rh5BG326800 Rh5CG353000 Rh5DG337800
rosa_wichuraiana	Rw3G018440 Rw5G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1124, 1794
AarI	CACCTGC	1 cut(s)	1835
AatII	GACGTC	1 cut(s)	2079
Acc36I	ACCTGC	1 cut(s)	1835
AccB7I	CCANNNNNTGG	2 cut(s)	898, 2395
AccBSI	CCGCTC	1 cut(s)	1644
AccI	GTMKAC	1 cut(s)	2743
AciI	CCGC	7 cut(s)	678, 1605, 1614, 1644, 2444, 2513, 2660
AclWI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1559
AcoI	YGGCCR	4 cut(s)	87, 2445, 2548, 2753
AcsI	RAATTY	8 cut(s)	121, 493, 618, 877, 1126, 1307, 1744, 1874
AcuI	CTGAAG	3 cut(s)	1187, 2400, 2766
AcyI	GRCGYC	1 cut(s)	2076
AfaI	GTAC	6 cut(s)	763, 909, 1153, 1225, 1453, 2393
AhdI	GACNNNNNGTC	1 cut(s)	2140
AjnI	CCWGG	3 cut(s)	84, 1530, 2237
AjuI	GAANNNNNNNTTGG	2 cut(s)	1749, 1781
AloI	GAACNNNNNNTCC	2 cut(s)	173, 205
Alw21I	GWGCWC	2 cut(s)	132, 282
Alw26I	GTCTC	2 cut(s)	1686, 2127
AlwI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1559
AlwNI	CAGNNNCTG	4 cut(s)	232, 490, 514, 655
ApeKI	GCWGC	4 cut(s)	502, 505, 721, 2399
ApoI	RAATTY	8 cut(s)	121, 493, 618, 877, 1126, 1307, 1744, 1874
Asp700I	GAANNNNTTC	4 cut(s)	308, 752, 1624, 2704
AspLEI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2362
AsuC2I	CCSGG	4 cut(s)	393, 770, 969, 2547
AsuHPI	GGTGA	7 cut(s)	212, 407, 1688, 2174, 2212, 2231, 2686
AsuII	TTCGAA	1 cut(s)	405
AvaII	GGWCC	7 cut(s)	181, 245, 542, 692, 902, 1906, 2719
BaeGI	GKGCMC	1 cut(s)	1996
BalI	TGGCCA	1 cut(s)	89
BanII	GRGCYC	2 cut(s)	132, 282
BarI	GAAGNNNNNNTAC	2 cut(s)	1612, 1644
BbsI	GAAGAC	1 cut(s)	2733
Bbv12I	GWGCWC	2 cut(s)	132, 282
BbvI	GCAGC	4 cut(s)	492, 514, 733, 2386
BceAI	ACGGC	1 cut(s)	2768
BciT130I	CCWGG	3 cut(s)	86, 1532, 2239
BclI	TGATCA	1 cut(s)	705
BcnI	CCSGG	4 cut(s)	393, 770, 969, 2547
BcoDI	GTCTC	2 cut(s)	1686, 2127
BfaI	CTAG	4 cut(s)	2033, 2082, 2519, 2723
BfmI	CTRYAG	4 cut(s)	462, 506, 656, 2650
BfoI	RGCGCY	3 cut(s)	69, 1001, 2363
BfuAI	ACCTGC	1 cut(s)	1835
BisI	GCNGC	6 cut(s)	503, 506, 722, 1605, 2400, 2445
BlsI	GCNGC	6 cut(s)	504, 507, 723, 1606, 2401, 2446
BmcAI	AGTACT	1 cut(s)	2393
Bme1390I	CCNGG	7 cut(s)	86, 393, 770, 969, 1532, 2239, 2547
Bme18I	GGWCC	7 cut(s)	181, 245, 542, 692, 902, 1906, 2719
BmeRI	GACNNNNNGTC	1 cut(s)	2140
BmiI	GGNNCC	9 cut(s)	182, 246, 305, 903, 1010, 1480, 1536, 2211, 2544
BmrFI	CCNGG	7 cut(s)	86, 393, 770, 969, 1532, 2239, 2547
BmrI	ACTGGG	2 cut(s)	1287, 2769
BmsI	GCATC	2 cut(s)	406, 2014
BmuI	ACTGGG	2 cut(s)	1287, 2769
BpiI	GAAGAC	1 cut(s)	2733
BplI	GAGNNNNNCTC	2 cut(s)	1507, 1539
BpmI	CTGGAG	3 cut(s)	281, 443, 2111
Bpu14I	TTCGAA	1 cut(s)	405
BpuEI	CTTGAG	3 cut(s)	1034, 1971, 2123
BpuMI	CCSGG	4 cut(s)	393, 770, 969, 2547
BsaBI	GATNNNNATC	2 cut(s)	807, 1341
BsaHI	GRCGYC	1 cut(s)	2076
BsaI	GGTCTC	1 cut(s)	2127
BsaJI	CCNNGG	3 cut(s)	968, 1866, 2070
BsaXI	ACNNNNNCTCC	6 cut(s)	463, 493, 1216, 1246, 2423, 2453
Bse118I	RCCGGY	1 cut(s)	611
Bse3DI	GCAATG	2 cut(s)	1078, 1298
Bse8I	GATNNNNATC	2 cut(s)	807, 1341
BseBI	CCWGG	3 cut(s)	86, 1532, 2239
BseDI	CCNNGG	3 cut(s)	968, 1866, 2070
BseGI	GGATG	7 cut(s)	445, 1555, 1813, 1876, 2055, 2371, 2632
BseJI	GATNNNNATC	2 cut(s)	807, 1341
BseMI	GCAATG	2 cut(s)	1078, 1298
BseMII	CTCAG	3 cut(s)	267, 1359, 1988
BseRI	GAGGAG	1 cut(s)	2068
BseSI	GKGCMC	1 cut(s)	1996
BseXI	GCAGC	4 cut(s)	492, 514, 733, 2386
BseYI	CCCAGC	2 cut(s)	232, 1378
BsgI	GTGCAG	1 cut(s)	2515
BsiHKAI	GWGCWC	2 cut(s)	132, 282
BsiSI	CCGG	7 cut(s)	393, 551, 612, 770, 968, 986, 2547
BslFI	GGGAC	3 cut(s)	194, 1828, 2572
BsmAI	GTCTC	2 cut(s)	1686, 2127
BsmFI	GGGAC	3 cut(s)	194, 1828, 2572
BsmI	GAATGC	3 cut(s)	460, 950, 1968
Bso31I	GGTCTC	1 cut(s)	2127
Bsp119I	TTCGAA	1 cut(s)	405
Bsp1286I	GDGCHC	3 cut(s)	132, 282, 1996
Bsp143I	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
BspACI	CCGC	7 cut(s)	678, 1605, 1614, 1644, 2444, 2513, 2660
BspCNI	CTCAG	3 cut(s)	268, 1360, 1989
BspLI	GGNNCC	9 cut(s)	182, 246, 305, 903, 1010, 1480, 1536, 2211, 2544
BspMAI	CTGCAG	2 cut(s)	510, 660
BspMI	ACCTGC	1 cut(s)	1835
BspPI	GGATC	5 cut(s)	810, 1058, 1278, 1477, 1559
BspT104I	TTCGAA	1 cut(s)	405
BspTNI	GGTCTC	1 cut(s)	2127
BsrBI	CCGCTC	1 cut(s)	1644
BsrDI	GCAATG	2 cut(s)	1078, 1298
BsrFI	RCCGGY	1 cut(s)	611
BssAI	RCCGGY	1 cut(s)	611
BssECI	CCNNGG	3 cut(s)	968, 1866, 2070
BssMI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
BssNAI	GTATAC	1 cut(s)	2744
BssNI	GRCGYC	1 cut(s)	2076
BssT1I	CCWWGG	2 cut(s)	1866, 2070
Bst1107I	GTATAC	1 cut(s)	2744
Bst2UI	CCWGG	3 cut(s)	86, 1532, 2239
Bst4CI	ACNGT	7 cut(s)	486, 583, 1321, 1588, 1916, 1932, 2439
Bst6I	CTCTTC	1 cut(s)	620
BstACI	GRCGYC	1 cut(s)	2076
BstAPI	GCANNNNNTGC	2 cut(s)	655, 1040
BstBI	TTCGAA	1 cut(s)	405
BstC8I	GCNNGC	3 cut(s)	1654, 2003, 2244
BstDEI	CTNAG	6 cut(s)	276, 1047, 1173, 1368, 1997, 2263
BstF5I	GGATG	7 cut(s)	445, 1555, 1813, 1876, 2055, 2371, 2632
BstH2I	RGCGCY	3 cut(s)	69, 1001, 2363
BstHHI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2362
BstKTI	GATC	6 cut(s)	708, 805, 1066, 1273, 1472, 1567
BstMAI	GTCTC	2 cut(s)	1686, 2127
BstMBI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 277, 655, 1040, 1613, 1662, 2338, 2510, 2519
BstNI	CCWGG	3 cut(s)	86, 1532, 2239
BstSCI	CCNGG	7 cut(s)	84, 391, 768, 967, 1530, 2237, 2545
BstSFI	CTRYAG	4 cut(s)	462, 506, 656, 2650
BstSLI	GKGCMC	1 cut(s)	1996
BstV1I	GCAGC	4 cut(s)	492, 514, 733, 2386
BstV2I	GAAGAC	1 cut(s)	2733
BstX2I	RGATCY	3 cut(s)	802, 1270, 1564
BstXI	CCANNNNNNTGG	3 cut(s)	314, 830, 2716
BstYI	RGATCY	3 cut(s)	802, 1270, 1564
BstZ17I	GTATAC	1 cut(s)	2744
BtsCI	GGATG	7 cut(s)	445, 1555, 1813, 1876, 2055, 2371, 2632
BtsI	GCAGTG	4 cut(s)	1672, 1833, 2527, 2532
BveI	ACCTGC	1 cut(s)	1835
Cac8I	GCNNGC	3 cut(s)	1654, 2003, 2244
CaiI	CAGNNNCTG	4 cut(s)	232, 490, 514, 655
CfoI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2362
Cfr10I	RCCGGY	1 cut(s)	611
Csp6I	GTAC	6 cut(s)	762, 908, 1152, 1224, 1452, 2392
CviQI	GTAC	6 cut(s)	762, 908, 1152, 1224, 1452, 2392
DdeI	CTNAG	6 cut(s)	276, 1047, 1173, 1368, 1997, 2263
DpnI	GATC	6 cut(s)	707, 804, 1065, 1272, 1471, 1566
DpnII	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
DraI	TTTAAA	2 cut(s)	2029, 2173
DriI	GACNNNNNGTC	1 cut(s)	2140
EaeI	YGGCCR	4 cut(s)	87, 2445, 2548, 2753
Eam1104I	CTCTTC	1 cut(s)	620
Eam1105I	GACNNNNNGTC	1 cut(s)	2140
EarI	CTCTTC	1 cut(s)	620
Ecl136II	GAGCTC	2 cut(s)	130, 280
Eco130I	CCWWGG	2 cut(s)	1866, 2070
Eco147I	AGGCCT	3 cut(s)	294, 411, 2377
Eco24I	GRGCYC	2 cut(s)	132, 282
Eco31I	GGTCTC	1 cut(s)	2127
Eco47I	GGWCC	7 cut(s)	181, 245, 542, 692, 902, 1906, 2719
Eco53kI	GAGCTC	2 cut(s)	130, 280
Eco57I	CTGAAG	3 cut(s)	1187, 2400, 2766
EcoICRI	GAGCTC	2 cut(s)	130, 280
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRI	GAATTC	3 cut(s)	121, 493, 1874
EcoRII	CCWGG	3 cut(s)	84, 1530, 2237
EcoT14I	CCWWGG	2 cut(s)	1866, 2070
EcoT22I	ATGCAT	1 cut(s)	952
EcoT38I	GRGCYC	2 cut(s)	132, 282
ErhI	CCWWGG	2 cut(s)	1866, 2070
FaqI	GGGAC	3 cut(s)	194, 1828, 2572
FauI	CCCGC	2 cut(s)	671, 2667
FbaI	TGATCA	1 cut(s)	705
FblI	GTMKAC	1 cut(s)	2743
Fnu4HI	GCNGC	6 cut(s)	503, 506, 722, 1605, 2400, 2445
FokI	GGATG	7 cut(s)	452, 1542, 1820, 1883, 2062, 2378, 2639
FriOI	GRGCYC	2 cut(s)	132, 282
Fsp4HI	GCNGC	6 cut(s)	503, 506, 722, 1605, 2400, 2445
FspBI	CTAG	4 cut(s)	2033, 2082, 2519, 2723
GlaI	GCGC	6 cut(s)	67, 501, 720, 984, 999, 2361
GluI	GCNGC	6 cut(s)	503, 506, 722, 1605, 2400, 2445
GsaI	CCCAGC	2 cut(s)	236, 1382
GsuI	CTGGAG	3 cut(s)	281, 443, 2111
HaeII	RGCGCY	3 cut(s)	69, 1001, 2363
HapII	CCGG	7 cut(s)	393, 551, 612, 770, 968, 986, 2547
HhaI	GCGC	6 cut(s)	68, 502, 721, 985, 1000, 2362
Hin1I	GRCGYC	1 cut(s)	2076
Hin6I	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2360
HinP1I	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2360
HincII	GTYRAC	1 cut(s)	1315
HindII	GTYRAC	1 cut(s)	1315
HindIII	AAGCTT	2 cut(s)	1199, 2119
HpaII	CCGG	7 cut(s)	393, 551, 612, 770, 968, 986, 2547
HphI	GGTGA	7 cut(s)	212, 407, 1688, 2174, 2212, 2231, 2686
Hpy166II	GTNNAC	5 cut(s)	471, 756, 959, 1315, 2744
Hpy188III	TCNNGA	8 cut(s)	106, 133, 298, 365, 422, 842, 860, 2213
Hpy8I	GTNNAC	5 cut(s)	471, 756, 959, 1315, 2744
Hpy99I	CGWCG	3 cut(s)	158, 577, 2081
HpyAV	CCTTC	8 cut(s)	37, 41, 235, 401, 793, 1105, 1173, 2690
HpyCH4III	ACNGT	7 cut(s)	486, 583, 1321, 1588, 1916, 1932, 2439
HpyCH4IV	ACGT	2 cut(s)	1154, 2076
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 277, 655, 1040, 1613, 1662, 2338, 2510, 2519
HpyF3I	CTNAG	6 cut(s)	276, 1047, 1173, 1368, 1997, 2263
HpySE526I	ACGT	2 cut(s)	1154, 2076
Hsp92I	GRCGYC	1 cut(s)	2076
HspAI	GCGC	6 cut(s)	66, 500, 719, 983, 998, 2360
Ksp22I	TGATCA	1 cut(s)	705
Kzo9I	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
LmnI	GCTCC	5 cut(s)	1507, 1540, 1641, 2215, 2338
Lsp1109I	GCAGC	4 cut(s)	492, 514, 733, 2386
LweI	GCATC	2 cut(s)	406, 2014
MaeI	CTAG	4 cut(s)	2033, 2082, 2519, 2723
MaeII	ACGT	2 cut(s)	1154, 2076
MaeIII	GTNAC	9 cut(s)	19, 486, 1506, 1735, 2233, 2258, 2281, 2525, 2711
MalI	GATC	6 cut(s)	707, 804, 1065, 1272, 1471, 1566
MbiI	CCGCTC	1 cut(s)	1644
MboI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
MfeI	CAATTG	2 cut(s)	1494, 2508
MflI	RGATCY	3 cut(s)	802, 1270, 1564
MhlI	GDGCHC	3 cut(s)	132, 282, 1996
MlsI	TGGCCA	1 cut(s)	89
MluNI	TGGCCA	1 cut(s)	89
MlyI	GAGTC	6 cut(s)	661, 1085, 1168, 1237, 1688, 2765
MmeI	TCCRAC	3 cut(s)	309, 1002, 1933
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	1 cut(s)	952
MroXI	GAANNNNTTC	4 cut(s)	308, 752, 1624, 2704
MscI	TGGCCA	1 cut(s)	89
MslI	CAYNNNNRTG	1 cut(s)	713
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	3 cut(s)	505, 1616, 2786
MspI	CCGG	7 cut(s)	393, 551, 612, 770, 968, 986, 2547
MspR9I	CCNGG	7 cut(s)	86, 393, 770, 969, 1532, 2239, 2547
MunI	CAATTG	2 cut(s)	1494, 2508
Mva1269I	GAATGC	3 cut(s)	460, 950, 1968
MvaI	CCWGG	3 cut(s)	86, 1532, 2239
MwoI	GCNNNNNNNGC	9 cut(s)	65, 277, 655, 1040, 1613, 1662, 2338, 2510, 2519
NciI	CCSGG	4 cut(s)	393, 770, 969, 2547
NdeII	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
NlaIV	GGNNCC	9 cut(s)	182, 246, 305, 903, 1010, 1480, 1536, 2211, 2544
NmeAIII	GCCGAG	1 cut(s)	540
NmuCI	GTSAC	4 cut(s)	1735, 2233, 2281, 2525
NsiI	ATGCAT	1 cut(s)	952
NspV	TTCGAA	1 cut(s)	405
PaqCI	CACCTGC	1 cut(s)	1835
PceI	AGGCCT	3 cut(s)	294, 411, 2377
PctI	GAATGC	3 cut(s)	460, 950, 1968
PdmI	GAANNNNTTC	4 cut(s)	308, 752, 1624, 2704
PflFI	GACNNNGTC	1 cut(s)	1914
PflMI	CCANNNNNTGG	2 cut(s)	898, 2395
PfoI	TCCNGGA	1 cut(s)	768
PkrI	GCNGC	6 cut(s)	504, 507, 723, 1606, 2401, 2446
PleI	GAGTC	6 cut(s)	660, 1084, 1167, 1237, 1687, 2765
PpsI	GAGTC	6 cut(s)	660, 1084, 1167, 1237, 1687, 2765
PpuMI	RGGWCCY	1 cut(s)	245
PsiI	TTATAA	2 cut(s)	1124, 1794
Psp124BI	GAGCTC	2 cut(s)	132, 282
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	3 cut(s)	84, 1530, 2237
PspFI	CCCAGC	2 cut(s)	232, 1378
PspGI	CCWGG	3 cut(s)	84, 1530, 2237
PspN4I	GGNNCC	9 cut(s)	182, 246, 305, 903, 1010, 1480, 1536, 2211, 2544
PspPPI	RGGWCCY	1 cut(s)	245
PstI	CTGCAG	2 cut(s)	510, 660
PstNI	CAGNNNCTG	4 cut(s)	232, 490, 514, 655
PsuI	RGATCY	3 cut(s)	802, 1270, 1564
PsyI	GACNNNGTC	1 cut(s)	1914
PvuII	CAGCTG	2 cut(s)	505, 2786
RsaI	GTAC	6 cut(s)	763, 909, 1153, 1225, 1453, 2393
RsaNI	GTAC	6 cut(s)	762, 908, 1152, 1224, 1452, 2392
RseI	CAYNNNNRTG	1 cut(s)	713
SacI	GAGCTC	2 cut(s)	132, 282
SatI	GCNGC	6 cut(s)	503, 506, 722, 1605, 2400, 2445
Sau3AI	GATC	6 cut(s)	705, 802, 1063, 1270, 1469, 1564
ScaI	AGTACT	1 cut(s)	2393
SchI	GAGTC	6 cut(s)	661, 1085, 1168, 1237, 1688, 2765
ScrFI	CCNGG	7 cut(s)	86, 393, 770, 969, 1532, 2239, 2547
SduI	GDGCHC	3 cut(s)	132, 282, 1996
SfaNI	GCATC	2 cut(s)	406, 2014
SfcI	CTRYAG	4 cut(s)	462, 506, 656, 2650
SfuI	TTCGAA	1 cut(s)	405
SinI	GGWCC	7 cut(s)	181, 245, 542, 692, 902, 1906, 2719
SmiMI	CAYNNNNRTG	1 cut(s)	713
SmlI	CTYRAG	3 cut(s)	1013, 1986, 2138
SmoI	CTYRAG	3 cut(s)	1013, 1986, 2138
SseBI	AGGCCT	3 cut(s)	294, 411, 2377
SsiI	CCGC	7 cut(s)	678, 1605, 1614, 1644, 2444, 2513, 2660
SspI	AATATT	2 cut(s)	2065, 2636
SspMI	CTAG	4 cut(s)	2033, 2082, 2519, 2723
SstI	GAGCTC	2 cut(s)	132, 282
StuI	AGGCCT	3 cut(s)	294, 411, 2377
StyD4I	CCNGG	7 cut(s)	84, 391, 768, 967, 1530, 2237, 2545
StyI	CCWWGG	2 cut(s)	1866, 2070
TaaI	ACNGT	7 cut(s)	486, 583, 1321, 1588, 1916, 1932, 2439
TaiI	ACGT	2 cut(s)	1157, 2079
TaqI	TCGA	2 cut(s)	405, 1463
TatI	WGTACW	1 cut(s)	2391
TauI	GCSGC	2 cut(s)	1607, 2447
TseFI	GTSAC	4 cut(s)	1735, 2233, 2281, 2525
TseI	GCWGC	4 cut(s)	502, 505, 721, 2399
Tsp45I	GTSAC	4 cut(s)	1735, 2233, 2281, 2525
TspGWI	ACGGA	2 cut(s)	534, 1494
Tth111I	GACNNNGTC	1 cut(s)	1914
Van91I	CCANNNNNTGG	2 cut(s)	898, 2395
VpaK11BI	GGWCC	7 cut(s)	181, 245, 542, 692, 902, 1906, 2719
XapI	RAATTY	8 cut(s)	121, 493, 618, 877, 1126, 1307, 1744, 1874
XmiI	GTMKAC	1 cut(s)	2743
XmnI	GAANNNNTTC	4 cut(s)	308, 752, 1624, 2704
XspI	CTAG	4 cut(s)	2033, 2082, 2519, 2723
ZraI	GACGTC	1 cut(s)	2077
ZrmI	AGTACT	1 cut(s)	2393
Zsp2I	ATGCAT	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.