Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001548

Physical Location & Seq

Genomic Coordinates Reverse (-)

46802931 .. 46806987

Gene Structure 4057 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025575

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGGGTGTGTAATTAGCAGAGAAACGTCCTCGGGAGTAGAGTCTGAATCTAAGGGTGTGAAGAAGGATTTGAGCGTGGAATCCAATAGGAAGGTAGATGATGTTGCGGTGGCCAAGGTAGATAGTGAGGCTGAAGTTGGGGGTGAGGTTGCTGTTGGTGGGGGTGAGGCTCAGAAGGTGGGGAATGGACATGAAAGTCAGCGGCCTCCGAAGGGGGAGAGAAGGCGGTCCAAGCCAAACCCGAGGAGTAGTCTGCCAAATAAAGCCCGTGGCGAGCAGGTAGCTGCTGGGTGGCCTCCTTGGCTCACGGCTGTGTGTGGGGAGGCGCTCAATGGGTGGATTCCACGGAAAGCAGACACCTTTGAGAAAATTGATAAGATTGGGTCAGGAACATACAGTAATGTGTACAAAGCTAAAGATATGTTGACGGGGAAAATTGTTGCTCTAAAGAAAGTTAGATTTGACAATTTGGAACCTGAGAGTGTGAAGTTTATGGCTAGAGAAATCCTAATTTTGCGGAGATTAGATCATACTAATGTTGTGAAGTTGGAGGGTCTGGTCACTTCAAGGATGTCATGTAGTTTGTACCTGGTGTTGGAATATATGGAACATGACCTAGCTGGACTTGCTGCAAGCCCAGAAATTAAGTTTACAGAAGCGCAGGTCAAATGTTATATGCATCAACTATTATCTGGACTTGAGCACTGTCACAACCGTGGTGTGCTTCATCGTGACATAAAGGGATCCAATCTTCTGATTGACAACGGAGGAGTACTTAAGATTGCTGACTTTGGCTTGGCTTCTTTCTACGATCCAAAGCACAAGCATCCCATGACTAGTCGGGTGGTTACTCTATGGTATCGACCTCCTGAGCTTCTTCTAGGGGCTACTGATTATAGTGTGGGGGTGGACCTTTGGAGTGCCGGTTGCATTTTAGCAGAGTTACTAGCTGGGAAGCCTATCATGCCTGGTCGTACTGAGGTAGAACAACTCCACAAGATATACAAACTATGCGGCTCACCTACAGATGAGTACTGGAAAAAAGCAAAGTTACCAAATGCAACTTTATTTAAGCCCCGAGAGCCTTACAAAAGAAGCATAAGAGAGACTTTCAAAGATTTCCCCCCATCAGCACTGCCTCTAATCGAAAGTTTACTTGCGATTGATCCCGCAGAGCGTCAGACAGCCTCAGCTGCATTGAGTAGTGAGTTTTTCATGACAGAGCCTTATGCTTGTGAACCTTCTAGCCTCCCAAAGTATCCCCCGACCAAAGAAATTGATGCTAAACGTCGAGACGATGAAGCTCGTAGGATAAGAGCTGCTGGTAGAGCCCAGGCTGATGGTGCAAAGAAAACACGTACACGTGAACGTGGTCCTAGGACTATGGCAGCTCCAGAAGCCAATGCGGAGATTCAATCTAATATCGATAGAAGGAGACTAATTACACATAATGCAAAGAGTAAAAGCGAAAAGTTTCCTCCACCGCACCAAGATGGGGCAGTTGGTTACCCATTGGGGGCTTCGCATCATATTGATCCTGCCCTTGTTCCTCCTGATGTCCCATTCAGTACAACCTCATTTGGTTATCCGAAAGAACCAATACAAACATGGTCAGGTCCTTTGGTTGACTCCACTGGTCCAAGAAGGAAGAAACATAGCGATGCACGAGAACCTTCAAAGTCCTTTATAGGAACTCATAAAGATAAACATCATGATGCGCGAGTTAGAGGAAAGAAAAGTGCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

583

Amino Acids

64.28

Weight (kDa)

9.33

Isoelectric Point (pI)

47.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	121 - 405	2.4e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	123 - 336	2.2e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54610 AT1G54610 AT1G54610 AT3G05050 AT3G05050 AT3G05050
fragaria_vesca	FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100
malus_domestica	MD02G1048200.v1.1 MD04G1216500.v1.1 MD12G1233100.v1.1 MD13G1173900.v1.1 MD16G1175000.v1.1
prunus_persica	Prupe.1G142100_v2.0.a1 Prupe.1G142100_v2.0.a1 Prupe.6G336200_v2.0.a1 Prupe.6G336200_v2.0.a1
pyrus_communis	pycom04g19240 pycom12g21560
rosa_chinensis	RchiOBHm_Chr3g0452651 RchiOBHm_Chr4g0420991
rosa_laevigata	RLG00000007715 RLG00000025575
rosa_multiflora	Rmu_sc0006508.1_g000002 Rmu_ssc0000156.1_g000011
rosa_roxburghii	Rroxscaffold_5G00363340 Rroxscaffold_6G00429690
rosa_rugosa	Rorug02G0642200 Rorug02G0642300 Rorug02G0642300 Rorug02G0642400 Rorug04G0167500 Rorug04G0167500
rosa_samantha	Rh3AG044600 Rh3BG046900 Rh3CG045400 Rh3DG045800 Rh4AG229000 Rh4BG232000 Rh4CG243600 Rh4DG227400
rosa_wichuraiana	Rw3G003480 Rw4G019800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	195
Acc36I	ACCTGC	2 cut(s)	268, 652
AccII	CGCG	1 cut(s)	1720
AciI	CCGC	8 cut(s)	107, 202, 226, 517, 1014, 1170, 1406, 1484
AclWI	GGATC	5 cut(s)	738, 751, 806, 1160, 1529
AcoI	YGGCCR	1 cut(s)	111
AcuI	CTGAAG	1 cut(s)	153
AcvI	CACGTG	1 cut(s)	1364
AfaI	GTAC	7 cut(s)	407, 587, 774, 976, 1034, 1360, 1570
AfiI	CCNNNNNNNGG	4 cut(s)	212, 595, 1495, 1516
AflII	CTTAAG	1 cut(s)	776
AflIII	ACRYGT	2 cut(s)	1355, 1361
AgsI	TTSAA	4 cut(s)	567, 1114, 1415, 1677
AhlI	ACTAGT	1 cut(s)	836
AjnI	CCWGG	3 cut(s)	588, 967, 1332
AleI	CACNNNNGTG	2 cut(s)	311, 714
Alw21I	GWGCWC	1 cut(s)	705
Alw26I	GTCTC	3 cut(s)	1100, 1287, 1429
AlwI	GGATC	5 cut(s)	738, 751, 806, 1160, 1529
Ama87I	CYCGRG	3 cut(s)	31, 241, 1077
AoxI	GGCC	3 cut(s)	111, 203, 293
ApeKI	GCWGC	6 cut(s)	284, 629, 1193, 1319, 1388, 1742
Asp700I	GAANNNNTTC	1 cut(s)	1473
AspA2I	CCTAGG	1 cut(s)	1376
AspLEI	GCGC	3 cut(s)	328, 661, 1720
AspS9I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
AsuHPI	GGTGA	3 cut(s)	155, 176, 1011
AvaI	CYCGRG	3 cut(s)	31, 241, 1077
AvaII	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
AvrII	CCTAGG	1 cut(s)	1376
BalI	TGGCCA	1 cut(s)	113
BamHI	GGATCC	1 cut(s)	743
BanII	GRGCYC	1 cut(s)	1333
BauI	CACGAG	1 cut(s)	1665
BbrPI	CACGTG	1 cut(s)	1364
Bbv12I	GWGCWC	1 cut(s)	705
BbvCI	CCTCAGC	1 cut(s)	1189
BbvI	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
BccI	CCATC	3 cut(s)	1135, 1334, 1487
BceAI	ACGGC	1 cut(s)	324
BciT130I	CCWGG	3 cut(s)	590, 969, 1334
BciVI	GTATCC	1 cut(s)	1269
BcoDI	GTCTC	3 cut(s)	1100, 1287, 1429
BcuI	ACTAGT	1 cut(s)	836
BfaI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
BfmI	CTRYAG	1 cut(s)	1023
BfoI	RGCGCY	1 cut(s)	329
BfrI	CTTAAG	1 cut(s)	776
BfuAI	ACCTGC	2 cut(s)	268, 652
BfuI	GTATCC	1 cut(s)	1269
BglI	GCCNNNNNGGC	1 cut(s)	301
BisI	GCNGC	8 cut(s)	203, 285, 630, 1015, 1194, 1320, 1389, 1743
BlnI	CCTAGG	1 cut(s)	1376
BlsI	GCNGC	8 cut(s)	204, 286, 631, 1016, 1195, 1321, 1390, 1744
BmcAI	AGTACT	2 cut(s)	774, 1034
Bme1390I	CCNGG	3 cut(s)	590, 969, 1334
Bme18I	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
BmeT110I	CYCGRG	3 cut(s)	31, 241, 1077
BmgT120I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
BmiI	GGNNCC	2 cut(s)	474, 745
BmrFI	CCNGG	3 cut(s)	590, 969, 1334
BmsI	GCATC	6 cut(s)	688, 835, 1270, 1534, 1651, 1705
BpmI	CTGGAG	1 cut(s)	1377
Bpu10I	CCTNAGC	2 cut(s)	870, 1189
BpuEI	CTTGAG	1 cut(s)	719
Bsa29I	ATCGAT	1 cut(s)	1425
BsaAI	YACGTR	2 cut(s)	1358, 1364
BsaBI	GATNNNNATC	1 cut(s)	1707
BsaJI	CCNNGG	9 cut(s)	30, 114, 242, 268, 299, 344, 715, 1332, 1376
BsaXI	ACNNNNNCTCC	2 cut(s)	910, 940
Bsc4I	CCNNNNNNNGG	4 cut(s)	212, 595, 1495, 1516
Bse118I	RCCGGY	1 cut(s)	923
Bse1I	ACTGG	2 cut(s)	1040, 1639
Bse8I	GATNNNNATC	1 cut(s)	1707
BseBI	CCWGG	3 cut(s)	590, 969, 1334
BseCI	ATCGAT	1 cut(s)	1425
BseDI	CCNNGG	9 cut(s)	30, 114, 242, 268, 299, 344, 715, 1332, 1376
BseGI	GGATG	2 cut(s)	576, 826
BseJI	GATNNNNATC	1 cut(s)	1707
BseLI	CCNNNNNNNGG	4 cut(s)	212, 595, 1495, 1516
BseMII	CTCAG	5 cut(s)	185, 468, 861, 969, 1203
BseNI	ACTGG	2 cut(s)	1040, 1639
BseRI	GAGGAG	2 cut(s)	259, 783
BseXI	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
BseYI	CCCAGC	2 cut(s)	287, 950
Bsh1236I	CGCG	1 cut(s)	1720
BshFI	GGCC	3 cut(s)	113, 205, 295
BshVI	ATCGAT	1 cut(s)	1425
BsiHKAI	GWGCWC	1 cut(s)	705
BsiHKCI	CYCGRG	3 cut(s)	31, 241, 1077
BsiSI	CCGG	1 cut(s)	924
BslFI	GGGAC	1 cut(s)	1544
BslI	CCNNNNNNNGG	4 cut(s)	212, 595, 1495, 1516
BsmAI	GTCTC	3 cut(s)	1100, 1287, 1429
BsmBI	CGTCTC	1 cut(s)	1287
BsmFI	GGGAC	1 cut(s)	1544
BsnI	GGCC	3 cut(s)	113, 205, 295
BsoBI	CYCGRG	3 cut(s)	31, 241, 1077
Bsp1286I	GDGCHC	2 cut(s)	705, 1333
Bsp1407I	TGTACA	1 cut(s)	405
Bsp143I	GATC	5 cut(s)	526, 743, 811, 1165, 1534
BspACI	CCGC	8 cut(s)	107, 202, 226, 517, 1014, 1170, 1406, 1484
BspANI	GGCC	3 cut(s)	113, 205, 295
BspCNI	CTCAG	5 cut(s)	184, 469, 862, 970, 1202
BspDI	ATCGAT	1 cut(s)	1425
BspFNI	CGCG	1 cut(s)	1720
BspHI	TCATGA	2 cut(s)	1215, 1711
BspLI	GGNNCC	2 cut(s)	474, 745
BspMI	ACCTGC	2 cut(s)	268, 652
BspPI	GGATC	5 cut(s)	738, 751, 806, 1160, 1529
BspTI	CTTAAG	1 cut(s)	776
BsrFI	RCCGGY	1 cut(s)	923
BsrGI	TGTACA	1 cut(s)	405
BsrI	ACTGG	2 cut(s)	1040, 1639
BssAI	RCCGGY	1 cut(s)	923
BssECI	CCNNGG	9 cut(s)	30, 114, 242, 268, 299, 344, 715, 1332, 1376
BssMI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
BssSI	CACGAG	1 cut(s)	1665
BssT1I	CCWWGG	3 cut(s)	114, 299, 1376
Bst2BI	CACGAG	1 cut(s)	1665
Bst2UI	CCWGG	3 cut(s)	590, 969, 1334
Bst4CI	ACNGT	3 cut(s)	398, 707, 716
BstAFI	CTTAAG	1 cut(s)	776
BstAUI	TGTACA	1 cut(s)	405
BstBAI	YACGTR	2 cut(s)	1358, 1364
BstC8I	GCNNGC	2 cut(s)	275, 634
BstDEI	CTNAG	6 cut(s)	51, 171, 477, 870, 978, 1189
BstDSI	CCRYGG	3 cut(s)	268, 344, 715
BstEII	GGTNACC	1 cut(s)	1505
BstF5I	GGATG	2 cut(s)	576, 826
BstFNI	CGCG	1 cut(s)	1720
BstH2I	RGCGCY	1 cut(s)	329
BstHHI	GCGC	3 cut(s)	328, 661, 1720
BstKTI	GATC	5 cut(s)	529, 746, 814, 1168, 1537
BstMAI	GTCTC	3 cut(s)	1100, 1287, 1429
BstMBI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
BstMWI	GCNNNNNNNGC	9 cut(s)	232, 301, 626, 964, 1081, 1193, 1328, 1343, 1397
BstNI	CCWGG	3 cut(s)	590, 969, 1334
BstPI	GGTNACC	1 cut(s)	1505
BstSCI	CCNGG	3 cut(s)	588, 967, 1332
BstSFI	CTRYAG	1 cut(s)	1023
BstUI	CGCG	1 cut(s)	1720
BstV1I	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
BstX2I	RGATCY	1 cut(s)	743
BstXI	CCANNNNNNTGG	1 cut(s)	1340
BstYI	RGATCY	1 cut(s)	743
Bsu15I	ATCGAT	1 cut(s)	1425
BsuI	GTATCC	1 cut(s)	1269
BsuRI	GGCC	3 cut(s)	113, 205, 295
BsuTUI	ATCGAT	1 cut(s)	1425
BtgI	CCRYGG	3 cut(s)	268, 344, 715
BtgZI	GCGATG	1 cut(s)	1674
BtsCI	GGATG	2 cut(s)	576, 826
BtsI	GCAGTG	1 cut(s)	1133
BtsIMutI	CAGTG	3 cut(s)	703, 1133, 1632
BveI	ACCTGC	2 cut(s)	268, 652
Cac8I	GCNNGC	2 cut(s)	275, 634
CciI	TCATGA	2 cut(s)	1215, 1711
CfoI	GCGC	3 cut(s)	328, 661, 1720
Cfr10I	RCCGGY	1 cut(s)	923
Cfr13I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
ClaI	ATCGAT	1 cut(s)	1425
CseI	GACGC	1 cut(s)	1166
CsiI	ACCWGGT	1 cut(s)	588
Csp6I	GTAC	7 cut(s)	406, 586, 773, 975, 1033, 1359, 1569
CviAII	CATG	8 cut(s)	191, 576, 611, 832, 964, 1216, 1608, 1712
CviQI	GTAC	7 cut(s)	406, 586, 773, 975, 1033, 1359, 1569
DdeI	CTNAG	6 cut(s)	51, 171, 477, 870, 978, 1189
DpnI	GATC	5 cut(s)	528, 745, 813, 1167, 1536
DpnII	GATC	5 cut(s)	526, 743, 811, 1165, 1534
DrdI	GACNNNNNNGTC	1 cut(s)	195
DseDI	GACNNNNNNGTC	1 cut(s)	195
EaeI	YGGCCR	1 cut(s)	111
Eco130I	CCWWGG	3 cut(s)	114, 299, 1376
Eco24I	GRGCYC	1 cut(s)	1333
Eco47I	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
Eco57I	CTGAAG	1 cut(s)	153
Eco72I	CACGTG	1 cut(s)	1364
Eco88I	CYCGRG	3 cut(s)	31, 241, 1077
Eco91I	GGTNACC	1 cut(s)	1505
EcoO109I	RGGNCCY	1 cut(s)	1616
EcoO65I	GGTNACC	1 cut(s)	1505
EcoRII	CCWGG	3 cut(s)	588, 967, 1332
EcoT14I	CCWWGG	3 cut(s)	114, 299, 1376
EcoT22I	ATGCAT	1 cut(s)	681
EcoT38I	GRGCYC	1 cut(s)	1333
ErhI	CCWWGG	3 cut(s)	114, 299, 1376
Esp3I	CGTCTC	1 cut(s)	1287
FaeI	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
FalI	AAGNNNNNCTT	3 cut(s)	1093, 1125, 1729
FaqI	GGGAC	1 cut(s)	1544
FatI	CATG	8 cut(s)	190, 575, 610, 831, 963, 1215, 1607, 1711
FauI	CCCGC	1 cut(s)	1177
Fnu4HI	GCNGC	8 cut(s)	203, 285, 630, 1015, 1194, 1320, 1389, 1743
FokI	GGATG	2 cut(s)	583, 813
FriOI	GRGCYC	1 cut(s)	1333
Fsp4HI	GCNGC	8 cut(s)	203, 285, 630, 1015, 1194, 1320, 1389, 1743
FspBI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
GlaI	GCGC	3 cut(s)	327, 660, 1719
GluI	GCNGC	8 cut(s)	203, 285, 630, 1015, 1194, 1320, 1389, 1743
GsaI	CCCAGC	2 cut(s)	291, 954
GsuI	CTGGAG	1 cut(s)	1377
HaeII	RGCGCY	1 cut(s)	329
HaeIII	GGCC	3 cut(s)	113, 205, 295
HapII	CCGG	1 cut(s)	924
HgaI	GACGC	1 cut(s)	1166
HhaI	GCGC	3 cut(s)	328, 661, 1720
Hin1II	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
Hin6I	GCGC	3 cut(s)	326, 659, 1718
HinP1I	GCGC	3 cut(s)	326, 659, 1718
HincII	GTYRAC	2 cut(s)	426, 1627
HindII	GTYRAC	2 cut(s)	426, 1627
HinfI	GANTC	6 cut(s)	41, 47, 80, 340, 1411, 1628
HpaII	CCGG	1 cut(s)	924
HphI	GGTGA	3 cut(s)	155, 176, 1011
Hpy166II	GTNNAC	9 cut(s)	406, 426, 651, 910, 1154, 1238, 1361, 1367, 1627
Hpy188I	TCNGA	6 cut(s)	46, 174, 210, 756, 1182, 1590
Hpy8I	GTNNAC	9 cut(s)	406, 426, 651, 910, 1154, 1238, 1361, 1367, 1627
Hpy99I	CGWCG	1 cut(s)	1293
HpyAV	CCTTC	9 cut(s)	58, 85, 169, 205, 216, 1251, 1425, 1638, 1683
HpyCH4III	ACNGT	3 cut(s)	398, 707, 716
HpyCH4IV	ACGT	5 cut(s)	26, 1288, 1357, 1363, 1369
HpyCH4V	TGCA	9 cut(s)	632, 679, 930, 1061, 1196, 1346, 1454, 1664, 1742
HpyF10VI	GCNNNNNNNGC	9 cut(s)	232, 301, 626, 964, 1081, 1193, 1328, 1343, 1397
HpyF3I	CTNAG	6 cut(s)	51, 171, 477, 870, 978, 1189
HpySE526I	ACGT	5 cut(s)	26, 1288, 1357, 1363, 1369
Hsp92II	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
HspAI	GCGC	3 cut(s)	326, 659, 1718
Kzo9I	GATC	5 cut(s)	526, 743, 811, 1165, 1534
LmnI	GCTCC	1 cut(s)	1396
Lsp1109I	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
LweI	GCATC	6 cut(s)	688, 835, 1270, 1534, 1651, 1705
MabI	ACCWGGT	1 cut(s)	588
MaeI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
MaeII	ACGT	5 cut(s)	26, 1288, 1357, 1363, 1369
MaeIII	GTNAC	7 cut(s)	559, 707, 731, 847, 942, 1050, 1505
MalI	GATC	5 cut(s)	528, 745, 813, 1167, 1536
MboI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
MboII	GAAGA	4 cut(s)	73, 743, 869, 1660
MflI	RGATCY	1 cut(s)	743
MhlI	GDGCHC	2 cut(s)	705, 1333
MlsI	TGGCCA	1 cut(s)	113
MluCI	AATT	8 cut(s)	12, 369, 435, 466, 510, 642, 1275, 1440
MluNI	TGGCCA	1 cut(s)	113
MlyI	GAGTC	2 cut(s)	50, 1622
MmeI	TCCRAC	2 cut(s)	528, 576
Mox20I	TGGCCA	1 cut(s)	113
Mph1103I	ATGCAT	1 cut(s)	681
MroXI	GAANNNNTTC	1 cut(s)	1473
MscI	TGGCCA	1 cut(s)	113
MseI	TTAA	4 cut(s)	645, 777, 1071, 1747
MslI	CAYNNNNRTG	6 cut(s)	311, 534, 714, 1491, 1659, 1713
Msp20I	TGGCCA	1 cut(s)	113
MspA1I	CMGCKG	2 cut(s)	202, 1193
MspCI	CTTAAG	1 cut(s)	776
MspI	CCGG	1 cut(s)	924
MspR9I	CCNGG	3 cut(s)	590, 969, 1334
MvaI	CCWGG	3 cut(s)	590, 969, 1334
MvnI	CGCG	1 cut(s)	1720
MwoI	GCNNNNNNNGC	9 cut(s)	232, 301, 626, 964, 1081, 1193, 1328, 1343, 1397
NdeII	GATC	5 cut(s)	526, 743, 811, 1165, 1534
NlaIII	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
NlaIV	GGNNCC	2 cut(s)	474, 745
NmuCI	GTSAC	3 cut(s)	559, 707, 731
NsiI	ATGCAT	1 cut(s)	681
OliI	CACNNNNGTG	2 cut(s)	311, 714
PagI	TCATGA	2 cut(s)	1215, 1711
PdmI	GAANNNNTTC	1 cut(s)	1473
PfeI	GAWTC	4 cut(s)	47, 80, 340, 1411
PkrI	GCNGC	8 cut(s)	204, 286, 631, 1016, 1195, 1321, 1390, 1744
PleI	GAGTC	2 cut(s)	49, 1622
PmaCI	CACGTG	1 cut(s)	1364
PmlI	CACGTG	1 cut(s)	1364
PpsI	GAGTC	2 cut(s)	49, 1622
Ppu21I	YACGTR	2 cut(s)	1358, 1364
PpuMI	RGGWCCY	1 cut(s)	1616
Psp5II	RGGWCCY	1 cut(s)	1616
Psp6I	CCWGG	3 cut(s)	588, 967, 1332
PspCI	CACGTG	1 cut(s)	1364
PspEI	GGTNACC	1 cut(s)	1505
PspFI	CCCAGC	2 cut(s)	287, 950
PspGI	CCWGG	3 cut(s)	588, 967, 1332
PspN4I	GGNNCC	2 cut(s)	474, 745
PspPI	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
PspPPI	RGGWCCY	1 cut(s)	1616
PsuI	RGATCY	1 cut(s)	743
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	7 cut(s)	407, 587, 774, 976, 1034, 1360, 1570
RsaNI	GTAC	7 cut(s)	406, 586, 773, 975, 1033, 1359, 1569
RseI	CAYNNNNRTG	6 cut(s)	311, 534, 714, 1491, 1659, 1713
SaqAI	TTAA	4 cut(s)	645, 777, 1071, 1747
SatI	GCNGC	8 cut(s)	203, 285, 630, 1015, 1194, 1320, 1389, 1743
Sau3AI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
Sau96I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
ScaI	AGTACT	2 cut(s)	774, 1034
SchI	GAGTC	2 cut(s)	50, 1622
ScrFI	CCNGG	3 cut(s)	590, 969, 1334
SduI	GDGCHC	2 cut(s)	705, 1333
SexAI	ACCWGGT	1 cut(s)	588
SfaNI	GCATC	6 cut(s)	688, 835, 1270, 1534, 1651, 1705
SfcI	CTRYAG	1 cut(s)	1023
SinI	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
SmiMI	CAYNNNNRTG	6 cut(s)	311, 534, 714, 1491, 1659, 1713
SmlI	CTYRAG	2 cut(s)	698, 776
SmoI	CTYRAG	2 cut(s)	698, 776
SpeI	ACTAGT	1 cut(s)	836
Sse9I	AATT	8 cut(s)	12, 369, 435, 466, 510, 642, 1275, 1440
SsiI	CCGC	8 cut(s)	107, 202, 226, 517, 1014, 1170, 1406, 1484
SspMI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
StyD4I	CCNGG	3 cut(s)	588, 967, 1332
StyI	CCWWGG	3 cut(s)	114, 299, 1376
TaaI	ACNGT	3 cut(s)	398, 707, 716
TaiI	ACGT	5 cut(s)	29, 1291, 1360, 1366, 1372
TaqI	TCGA	4 cut(s)	862, 1146, 1291, 1425
TasI	AATT	8 cut(s)	12, 369, 435, 466, 510, 642, 1275, 1440
TatI	WGTACW	4 cut(s)	405, 772, 1032, 1568
TauI	GCSGC	2 cut(s)	205, 1017
TfiI	GAWTC	4 cut(s)	47, 80, 340, 1411
Tru1I	TTAA	4 cut(s)	645, 777, 1071, 1747
Tru9I	TTAA	4 cut(s)	645, 777, 1071, 1747
TscAI	CASTG	3 cut(s)	710, 1140, 1639
TseFI	GTSAC	3 cut(s)	559, 707, 731
TseI	GCWGC	6 cut(s)	284, 629, 1193, 1319, 1388, 1742
Tsp45I	GTSAC	3 cut(s)	559, 707, 731
TspDTI	ATGAA	4 cut(s)	207, 716, 1204, 1314
TspGWI	ACGGA	2 cut(s)	361, 780
TspRI	CASTG	3 cut(s)	710, 1140, 1639
Vha464I	CTTAAG	1 cut(s)	776
VpaK11BI	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1605
XmaJI	CCTAGG	1 cut(s)	1376
XmnI	GAANNNNTTC	1 cut(s)	1473
XspI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
ZrmI	AGTACT	2 cut(s)	774, 1034
Zsp2I	ATGCAT	1 cut(s)	681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.