Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001548

Physical Location & Seq

Genomic Coordinates Reverse (-)

53051963 .. 53055745

Gene Structure 3783 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG229000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGGCTGCGTTTTCGGCAAAGACGCTTCGGCGGCGGCTGCGGCGGCGGCGGTGGAGAAGGATTTCGGGGAGGTTAGGGTTTCGAAGAAGGCGGCGGCGGCGGCGGAGGCGAGCGGCGGCAGCGGCGGAGAGGTGAGTGAGGAGGTGAGGAATGGGGAGGAGGGGGAGAGGAGGACGAGGCCGAAAGGCGAACGGCGGCGATCTTCGAGGCCGAATCCGAGGAACAGTAATCCGCCGAAGCATTTGCAGGGGGAGCAGGTCGCCGCCGGGTGGCCGTCGTGGCTCTCCGCCGTCGCCGGCGAGGCCATTAATGGCTGGACGCCGCGCCGCGCCGACACGTTCGAGAAGCTCGATAAGATTGGGCAAGGTACATACAGTAATGTGTACAAAGCTAGGGATACTTTGACGGGGAAGATTGTTGCGCTAAAGAAGGTTCGGTTTGATAATTTGGAGCCTGAGAGTGTAAAGTTCATGGCCAGAGAGATTCTCATCCTACGACGTTTGGATCATCCAAATGTTATAAAGTTGGAAGGTTTAGTCACGTCGAGGATGTCATGTAGTTTGTACCTTGTATTTGAATATATGGAGCATGATTTGGCAGGACTTGCTGCAAGCCCTGCAATCAAGTTCACAGAGCCTCAGGTTAAATGCTATATGCACCAGATATTATCGGGTCTTGAACACTGTCACAACCGCAATGTGCTTCATCGTGACATTAAAGGGTCCAATCTTCTAATTGACAATGGTGGAATCTTAAAGATTGCTGATTTTGGATTGGCTTCGTTCTTTGATCCTAATCACAAGCAACCAATGACTAGTAGAGTAGTTACTCTATGGTATCGACCCCCAGAGCTTCTCCTTGGTGCCACTGATTATGGTGTAGGTGTGGACCTCTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTGGCTGGAAAGCCAATCATGCCTGGTCGCACAGAAGTGGAGCAGTTACACAAGATATTCAAGTTATGTGGCTCCCCTTCGGAAGAATATTGGAAAAAGTCAAAGTTGCCACATGCAACCATTTTTAAACCTCAGCAATCATACAAAAGATGCATTGCAGAAACCTTTAAAGACTTTCCACCATCATCATTGCCACTGATTGACACCCTCCTTTCAATTGATCCAGCTCAACGTCAGACTGCCACTGCTGCATTGAGGAATGAATTTTTCACAACCAAACCTTATGCTTGTGATCCTTCTAGCCTCCCAAAATATCCACCCAGCAAAGAAATGGATGCTAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCTGCTGGAAAATCTAATGCAGATGGTGTAAGGAGATCTCGGCCACGTGATCGAGCTGTTAGGGGAATTCCTGTTCCGGAAGCCAATGCTGAGCTTCAAGCCAATCTTGATAGGCGGCGTCTAATAACACATGCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCTCCTCCACACCAAGATGGAACACTTGGCTATACTTTAGGTTCTTCAAACCACATTGATCCTGTTTTCGATCCCCCTGATGTTCCATTCAGTTCCACAAACTTCTCATATTCAAAAGAATCCATTCAAACTTGGTCTGGCCCCTTAATAGACCCTGCTGGAGTAGGGGCTCCAAGGAGAAAGAAACACTCATCAGGACAAATTCATTCACAGTCAAAGACCTCAAAAAGAGACCCAAAGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

567

Amino Acids

62.65

Weight (kDa)

9.48

Isoelectric Point (pI)

53.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	114 - 398	5.1e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	117 - 327	1.3e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54610 AT1G54610 AT1G54610 AT3G05050 AT3G05050 AT3G05050
fragaria_vesca	FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100
malus_domestica	MD02G1048200.v1.1 MD04G1216500.v1.1 MD12G1233100.v1.1 MD13G1173900.v1.1 MD16G1175000.v1.1
prunus_persica	Prupe.1G142100_v2.0.a1 Prupe.1G142100_v2.0.a1 Prupe.6G336200_v2.0.a1 Prupe.6G336200_v2.0.a1
pyrus_communis	pycom04g19240 pycom12g21560
rosa_chinensis	RchiOBHm_Chr3g0452651 RchiOBHm_Chr4g0420991
rosa_laevigata	RLG00000007715 RLG00000025575
rosa_multiflora	Rmu_sc0006508.1_g000002 Rmu_ssc0000156.1_g000011
rosa_roxburghii	Rroxscaffold_5G00363340 Rroxscaffold_6G00429690
rosa_rugosa	Rorug02G0642200 Rorug02G0642300 Rorug02G0642300 Rorug02G0642400 Rorug04G0167500 Rorug04G0167500
rosa_samantha	Rh3AG044600 Rh3BG046900 Rh3CG045400 Rh3DG045800 Rh4AG229000 Rh4BG232000 Rh4CG243600 Rh4DG227400
rosa_wichuraiana	Rw3G003480 Rw4G019800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	521
Acc36I	ACCTGC	1 cut(s)	247
AccB1I	GGYRCC	1 cut(s)	863
AccBSI	CCGCTC	1 cut(s)	114
AccII	CGCG	2 cut(s)	325, 330
AccIII	TCCGGA	1 cut(s)	1372
AclWI	GGATC	6 cut(s)	513, 785, 1139, 1211, 1511, 1523
AcoI	YGGCCR	3 cut(s)	272, 474, 1337
AcsI	RAATTY	3 cut(s)	1187, 1362, 1659
AcvI	CACGTG	1 cut(s)	1343
AcyI	GRCGYC	2 cut(s)	320, 1414
AfaI	GTAC	3 cut(s)	370, 386, 566
AfiI	CCNNNNNNNGG	1 cut(s)	270
AflIII	ACRYGT	1 cut(s)	336
AgsI	TTSAA	8 cut(s)	578, 680, 985, 1140, 1394, 1506, 1572, 1586
AhlI	ACTAGT	1 cut(s)	815
AjiI	CACGTC	1 cut(s)	543
AjnI	CCWGG	1 cut(s)	946
AleI	CACNNNNGTG	1 cut(s)	959
AloI	GAACNNNNNNTCC	2 cut(s)	1353, 1385
Alw26I	GTCTC	1 cut(s)	1683
AlwI	GGATC	6 cut(s)	513, 785, 1139, 1211, 1511, 1523
Aor13HI	TCCGGA	1 cut(s)	1372
AoxI	GGCC	7 cut(s)	179, 209, 272, 303, 474, 1337, 1597
ApeKI	GCWGC	7 cut(s)	6, 38, 120, 608, 906, 1172, 1298
ApoI	RAATTY	3 cut(s)	1187, 1362, 1659
AseI	ATTAAT	1 cut(s)	309
Asp700I	GAANNNNTTC	2 cut(s)	62, 1581
AspLEI	GCGC	3 cut(s)	327, 332, 424
AspS9I	GGNCC	3 cut(s)	723, 889, 1598
AsuC2I	CCSGG	1 cut(s)	268
AsuHPI	GGTGA	2 cut(s)	145, 157
AsuII	TTCGAA	1 cut(s)	83
AvaII	GGWCC	2 cut(s)	723, 889
AxyI	CCTNAGG	1 cut(s)	639
BalI	TGGCCA	1 cut(s)	476
BanI	GGYRCC	1 cut(s)	863
BanII	GRGCYC	1 cut(s)	1630
BbrPI	CACGTG	1 cut(s)	1343
BbvCI	CCTCAGC	1 cut(s)	1056
BbvI	GCAGC	6 cut(s)	25, 132, 595, 893, 1159, 1285
BccI	CCATC	3 cut(s)	1114, 1313, 1469
BceAI	ACGGC	3 cut(s)	209, 259, 275
BcgI	CGANNNNNNTGC	2 cut(s)	226, 260
BciT130I	CCWGG	1 cut(s)	948
BciVI	GTATCC	1 cut(s)	391
BcnI	CCSGG	1 cut(s)	268
BcoDI	GTCTC	1 cut(s)	1683
BcuI	ACTAGT	1 cut(s)	815
BfaI	CTAG	4 cut(s)	393, 816, 1224, 1284
BfuAI	ACCTGC	1 cut(s)	247
BfuI	GTATCC	1 cut(s)	391
BglI	GCCNNNNNGGC	2 cut(s)	280, 302
BglII	AGATCT	1 cut(s)	1331
BlpI	GCTNAGC	2 cut(s)	1263, 1386
Bme1390I	CCNGG	2 cut(s)	268, 948
Bme18I	GGWCC	2 cut(s)	723, 889
BmgBI	CACGTC	1 cut(s)	543
BmgT120I	GGNCC	3 cut(s)	723, 889, 1598
BmiI	GGNNCC	6 cut(s)	453, 724, 865, 997, 1600, 1629
BmrFI	CCNGG	2 cut(s)	268, 948
BmsI	GCATC	2 cut(s)	1064, 1249
BplI	GAGNNNNNCTC	2 cut(s)	471, 503
BpmI	CTGGAG	2 cut(s)	916, 1638
Bpu10I	CCTNAGC	1 cut(s)	1056
Bpu1102I	GCTNAGC	2 cut(s)	1263, 1386
Bpu14I	TTCGAA	1 cut(s)	83
BpuMI	CCSGG	1 cut(s)	268
BsaAI	YACGTR	1 cut(s)	1343
BsaBI	GATNNNNATC	2 cut(s)	488, 795
BsaHI	GRCGYC	2 cut(s)	320, 1414
BsaI	GGTCTC	1 cut(s)	1683
BsaJI	CCNNGG	3 cut(s)	218, 859, 1631
BsaWI	WCCGGW	1 cut(s)	1372
Bsc4I	CCNNNNNNNGG	1 cut(s)	270
Bse118I	RCCGGY	1 cut(s)	296
Bse21I	CCTNAGG	1 cut(s)	639
Bse3DI	GCAATG	3 cut(s)	703, 1077, 1112
Bse8I	GATNNNNATC	2 cut(s)	488, 795
BseAI	TCCGGA	1 cut(s)	1372
BseBI	CCWGG	1 cut(s)	948
BseDI	CCNNGG	3 cut(s)	218, 859, 1631
BseGI	GGATG	5 cut(s)	489, 508, 555, 1264, 1279
BseJI	GATNNNNATC	2 cut(s)	488, 795
BseLI	CCNNNNNNNGG	1 cut(s)	270
BseMI	GCAATG	3 cut(s)	703, 1077, 1112
BseMII	CTCAG	5 cut(s)	447, 653, 909, 1070, 1377
BseRI	GAGGAG	4 cut(s)	155, 173, 184, 1452
BseXI	GCAGC	6 cut(s)	25, 132, 595, 893, 1159, 1285
BseYI	CCCAGC	1 cut(s)	1244
Bsh1236I	CGCG	2 cut(s)	325, 330
BshFI	GGCC	7 cut(s)	181, 211, 274, 305, 476, 1339, 1599
BshNI	GGYRCC	1 cut(s)	863
BsiSI	CCGG	3 cut(s)	267, 297, 1373
BslI	CCNNNNNNNGG	1 cut(s)	270
BsmAI	GTCTC	1 cut(s)	1683
BsnI	GGCC	7 cut(s)	181, 211, 274, 305, 476, 1339, 1599
Bso31I	GGTCTC	1 cut(s)	1683
Bsp119I	TTCGAA	1 cut(s)	83
Bsp1286I	GDGCHC	1 cut(s)	1630
Bsp13I	TCCGGA	1 cut(s)	1372
Bsp1407I	TGTACA	1 cut(s)	384
Bsp143I	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
Bsp1720I	GCTNAGC	2 cut(s)	1263, 1386
BspANI	GGCC	7 cut(s)	181, 211, 274, 305, 476, 1339, 1599
BspCNI	CTCAG	5 cut(s)	448, 652, 910, 1069, 1378
BspEI	TCCGGA	1 cut(s)	1372
BspFNI	CGCG	2 cut(s)	325, 330
BspLI	GGNNCC	6 cut(s)	453, 724, 865, 997, 1600, 1629
BspMI	ACCTGC	1 cut(s)	247
BspPI	GGATC	6 cut(s)	513, 785, 1139, 1211, 1511, 1523
BspT104I	TTCGAA	1 cut(s)	83
BspT107I	GGYRCC	1 cut(s)	863
BspTNI	GGTCTC	1 cut(s)	1683
BsrBI	CCGCTC	1 cut(s)	114
BsrDI	GCAATG	3 cut(s)	703, 1077, 1112
BsrFI	RCCGGY	1 cut(s)	296
BsrGI	TGTACA	1 cut(s)	384
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	3 cut(s)	218, 859, 1631
BssMI	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
BssNI	GRCGYC	2 cut(s)	320, 1414
BssT1I	CCWWGG	2 cut(s)	859, 1631
Bst2UI	CCWGG	1 cut(s)	948
Bst4CI	ACNGT	4 cut(s)	227, 377, 686, 1671
BstACI	GRCGYC	2 cut(s)	320, 1414
BstAPI	GCANNNNNTGC	2 cut(s)	605, 617
BstAUI	TGTACA	1 cut(s)	384
BstBAI	YACGTR	1 cut(s)	1343
BstBI	TTCGAA	1 cut(s)	83
BstC8I	GCNNGC	4 cut(s)	112, 298, 613, 904
BstDEI	CTNAG	6 cut(s)	456, 639, 918, 1056, 1263, 1386
BstF5I	GGATG	5 cut(s)	489, 508, 555, 1264, 1279
BstFNI	CGCG	2 cut(s)	325, 330
BstHHI	GCGC	3 cut(s)	327, 332, 424
BstKTI	GATC	9 cut(s)	203, 508, 793, 1147, 1219, 1334, 1348, 1519, 1531
BstMAI	GTCTC	1 cut(s)	1683
BstMBI	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
BstNI	CCWGG	1 cut(s)	948
BstNSI	RCATGY	2 cut(s)	1040, 1430
BstSCI	CCNGG	2 cut(s)	266, 946
BstUI	CGCG	2 cut(s)	325, 330
BstV1I	GCAGC	6 cut(s)	25, 132, 595, 893, 1159, 1285
BstX2I	RGATCY	1 cut(s)	1331
BstYI	RGATCY	1 cut(s)	1331
Bsu36I	CCTNAGG	1 cut(s)	639
BsuI	GTATCC	1 cut(s)	391
BsuRI	GGCC	7 cut(s)	181, 211, 274, 305, 476, 1339, 1599
BtrI	CACGTC	1 cut(s)	543
BtsCI	GGATG	5 cut(s)	489, 508, 555, 1264, 1279
BtsI	GCAGTG	1 cut(s)	1167
BtsIMutI	CAGTG	4 cut(s)	682, 867, 1118, 1167
BveI	ACCTGC	1 cut(s)	247
Cac8I	GCNNGC	4 cut(s)	112, 298, 613, 904
CfoI	GCGC	3 cut(s)	327, 332, 424
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	3 cut(s)	723, 889, 1598
CseI	GACGC	3 cut(s)	32, 328, 1403
Csp6I	GTAC	3 cut(s)	369, 385, 565
CspCI	CAANNNNNGTGG	2 cut(s)	973, 1008
CviAII	CATG	6 cut(s)	472, 555, 590, 943, 1037, 1427
CviQI	GTAC	3 cut(s)	369, 385, 565
DdeI	CTNAG	6 cut(s)	456, 639, 918, 1056, 1263, 1386
DpnI	GATC	9 cut(s)	202, 507, 792, 1146, 1218, 1333, 1347, 1518, 1530
DpnII	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
DraI	TTTAAA	2 cut(s)	1051, 1093
EaeI	YGGCCR	3 cut(s)	272, 474, 1337
EciI	GGCGGA	4 cut(s)	119, 141, 222, 277
Eco130I	CCWWGG	2 cut(s)	859, 1631
Eco24I	GRGCYC	1 cut(s)	1630
Eco31I	GGTCTC	1 cut(s)	1683
Eco47I	GGWCC	2 cut(s)	723, 889
Eco72I	CACGTG	1 cut(s)	1343
Eco81I	CCTNAGG	1 cut(s)	639
EcoRI	GAATTC	1 cut(s)	1362
EcoRII	CCWGG	1 cut(s)	946
EcoT14I	CCWWGG	2 cut(s)	859, 1631
EcoT22I	ATGCAT	1 cut(s)	1079
EcoT38I	GRGCYC	1 cut(s)	1630
ErhI	CCWWGG	2 cut(s)	859, 1631
FaeI	CATG	6 cut(s)	475, 558, 593, 946, 1040, 1430
FalI	AAGNNNNNCTT	2 cut(s)	1386, 1418
FatI	CATG	6 cut(s)	471, 554, 589, 942, 1036, 1426
FokI	GGATG	5 cut(s)	476, 495, 562, 1271, 1286
FriOI	GRGCYC	1 cut(s)	1630
FspBI	CTAG	4 cut(s)	393, 816, 1224, 1284
GlaI	GCGC	3 cut(s)	326, 331, 423
GsaI	CCCAGC	1 cut(s)	1248
GsuI	CTGGAG	2 cut(s)	916, 1638
HaeIII	GGCC	7 cut(s)	181, 211, 274, 305, 476, 1339, 1599
HapII	CCGG	3 cut(s)	267, 297, 1373
HgaI	GACGC	3 cut(s)	32, 328, 1403
HhaI	GCGC	3 cut(s)	327, 332, 424
Hin1I	GRCGYC	2 cut(s)	320, 1414
Hin1II	CATG	6 cut(s)	475, 558, 593, 946, 1040, 1430
Hin6I	GCGC	3 cut(s)	325, 330, 422
HinP1I	GCGC	3 cut(s)	325, 330, 422
HinfI	GANTC	4 cut(s)	214, 484, 750, 1577
HpaII	CCGG	3 cut(s)	267, 297, 1373
HphI	GGTGA	2 cut(s)	145, 157
Hpy166II	GTNNAC	3 cut(s)	385, 630, 889
Hpy188I	TCNGA	3 cut(s)	219, 1006, 1161
Hpy188III	TCNNGA	7 cut(s)	343, 677, 710, 895, 1373, 1403, 1653
Hpy8I	GTNNAC	3 cut(s)	385, 630, 889
Hpy99I	CGWCG	4 cut(s)	280, 296, 501, 547
HpyAV	CCTTC	6 cut(s)	52, 82, 424, 524, 1011, 1230
HpyCH4III	ACNGT	4 cut(s)	227, 377, 686, 1671
HpyCH4IV	ACGT	5 cut(s)	338, 499, 542, 1156, 1342
HpyF3I	CTNAG	6 cut(s)	456, 639, 918, 1056, 1263, 1386
HpySE526I	ACGT	5 cut(s)	338, 499, 542, 1156, 1342
Hsp92I	GRCGYC	2 cut(s)	320, 1414
Hsp92II	CATG	6 cut(s)	475, 558, 593, 946, 1040, 1430
HspAI	GCGC	3 cut(s)	325, 330, 422
Kpn2I	TCCGGA	1 cut(s)	1372
KroI	GCCGGC	1 cut(s)	296
KroNI	GCCGGC	1 cut(s)	298
Kzo9I	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
LmnI	GCTCC	6 cut(s)	253, 451, 586, 964, 1001, 1633
Lsp1109I	GCAGC	6 cut(s)	25, 132, 595, 893, 1159, 1285
LweI	GCATC	2 cut(s)	1064, 1249
MaeI	CTAG	4 cut(s)	393, 816, 1224, 1284
MaeII	ACGT	5 cut(s)	338, 499, 542, 1156, 1342
MaeIII	GTNAC	5 cut(s)	538, 686, 710, 826, 969
MalI	GATC	9 cut(s)	202, 507, 792, 1146, 1218, 1333, 1347, 1518, 1530
MbiI	CCGCTC	1 cut(s)	114
MboI	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
MboII	GAAGA	8 cut(s)	97, 195, 424, 722, 1019, 1289, 1299, 1494
MfeI	CAATTG	1 cut(s)	1140
MflI	RGATCY	1 cut(s)	1331
MhlI	GDGCHC	1 cut(s)	1630
MlsI	TGGCCA	1 cut(s)	476
MluCI	AATT	6 cut(s)	445, 735, 1140, 1187, 1362, 1659
MluNI	TGGCCA	1 cut(s)	476
MmeI	TCCRAC	1 cut(s)	507
Mox20I	TGGCCA	1 cut(s)	476
Mph1103I	ATGCAT	1 cut(s)	1079
MreI	CGCCGGCG	1 cut(s)	296
MroI	TCCGGA	1 cut(s)	1372
MroNI	GCCGGC	1 cut(s)	296
MroXI	GAANNNNTTC	2 cut(s)	62, 1581
MscI	TGGCCA	1 cut(s)	476
MseI	TTAA	7 cut(s)	309, 645, 717, 755, 1050, 1092, 1604
MslI	CAYNNNNRTG	4 cut(s)	513, 959, 1431, 1473
Msp20I	TGGCCA	1 cut(s)	476
MspA1I	CMGCKG	1 cut(s)	123
MspI	CCGG	3 cut(s)	267, 297, 1373
MspR9I	CCNGG	2 cut(s)	268, 948
MteI	GCGCNGCGC	1 cut(s)	328
MunI	CAATTG	1 cut(s)	1140
MvaI	CCWGG	1 cut(s)	948
MvnI	CGCG	2 cut(s)	325, 330
NaeI	GCCGGC	1 cut(s)	298
NciI	CCSGG	1 cut(s)	268
NdeII	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
NgoMIV	GCCGGC	1 cut(s)	296
NlaIII	CATG	6 cut(s)	475, 558, 593, 946, 1040, 1430
NlaIV	GGNNCC	6 cut(s)	453, 724, 865, 997, 1600, 1629
NmeAIII	GCCGAG	1 cut(s)	1315
NmuCI	GTSAC	3 cut(s)	538, 686, 710
NsiI	ATGCAT	1 cut(s)	1079
NspI	RCATGY	2 cut(s)	1040, 1430
NspV	TTCGAA	1 cut(s)	83
OliI	CACNNNNGTG	1 cut(s)	959
PcsI	WCGNNNNNNNCGW	1 cut(s)	348
PdiI	GCCGGC	1 cut(s)	298
PdmI	GAANNNNTTC	2 cut(s)	62, 1581
PfeI	GAWTC	4 cut(s)	214, 484, 750, 1577
PmaCI	CACGTG	1 cut(s)	1343
PmlI	CACGTG	1 cut(s)	1343
Ppu21I	YACGTR	1 cut(s)	1343
PshBI	ATTAAT	1 cut(s)	309
PsiI	TTATAA	1 cut(s)	521
Psp6I	CCWGG	1 cut(s)	946
PspCI	CACGTG	1 cut(s)	1343
PspFI	CCCAGC	1 cut(s)	1244
PspGI	CCWGG	1 cut(s)	946
PspN4I	GGNNCC	6 cut(s)	453, 724, 865, 997, 1600, 1629
PspPI	GGNCC	3 cut(s)	723, 889, 1598
PsuI	RGATCY	1 cut(s)	1331
RsaI	GTAC	3 cut(s)	370, 386, 566
RsaNI	GTAC	3 cut(s)	369, 385, 565
RseI	CAYNNNNRTG	4 cut(s)	513, 959, 1431, 1473
SaqAI	TTAA	7 cut(s)	309, 645, 717, 755, 1050, 1092, 1604
Sau3AI	GATC	9 cut(s)	200, 505, 790, 1144, 1216, 1331, 1345, 1516, 1528
Sau96I	GGNCC	3 cut(s)	723, 889, 1598
ScrFI	CCNGG	2 cut(s)	268, 948
SduI	GDGCHC	1 cut(s)	1630
SfaNI	GCATC	2 cut(s)	1064, 1249
SfuI	TTCGAA	1 cut(s)	83
SgrAI	CRCCGGYG	1 cut(s)	296
SinI	GGWCC	2 cut(s)	723, 889
SmiMI	CAYNNNNRTG	4 cut(s)	513, 959, 1431, 1473
SpeI	ACTAGT	1 cut(s)	815
Sse9I	AATT	6 cut(s)	445, 735, 1140, 1187, 1362, 1659
SspI	AATATT	1 cut(s)	1013
SspMI	CTAG	4 cut(s)	393, 816, 1224, 1284
StyD4I	CCNGG	2 cut(s)	266, 946
StyI	CCWWGG	2 cut(s)	859, 1631
TaaI	ACNGT	4 cut(s)	227, 377, 686, 1671
TaiI	ACGT	5 cut(s)	341, 502, 545, 1159, 1345
TaqI	TCGA	8 cut(s)	83, 206, 342, 351, 545, 841, 1348, 1527
TasI	AATT	6 cut(s)	445, 735, 1140, 1187, 1362, 1659
TatI	WGTACW	1 cut(s)	384
TfiI	GAWTC	4 cut(s)	214, 484, 750, 1577
Tru1I	TTAA	7 cut(s)	309, 645, 717, 755, 1050, 1092, 1604
Tru9I	TTAA	7 cut(s)	309, 645, 717, 755, 1050, 1092, 1604
TscAI	CASTG	4 cut(s)	689, 874, 1125, 1174
TseFI	GTSAC	3 cut(s)	538, 686, 710
TseI	GCWGC	7 cut(s)	6, 38, 120, 608, 906, 1172, 1298
Tsp45I	GTSAC	3 cut(s)	538, 686, 710
TspDTI	ATGAA	5 cut(s)	460, 695, 1200, 1290, 1652
TspRI	CASTG	4 cut(s)	689, 874, 1125, 1174
VpaK11BI	GGWCC	2 cut(s)	723, 889
VspI	ATTAAT	1 cut(s)	309
XapI	RAATTY	3 cut(s)	1187, 1362, 1659
XceI	RCATGY	2 cut(s)	1040, 1430
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1252
XmnI	GAANNNNTTC	2 cut(s)	62, 1581
XspI	CTAG	4 cut(s)	393, 816, 1224, 1284
Zsp2I	ATGCAT	1 cut(s)	1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.