Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001548

Physical Location & Seq

Genomic Coordinates Reverse (-)

49050402 .. 49054653

Gene Structure 4252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG243600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGGCTGTGTTTTCGGCAAAGACGCGGCGGCGGCTGCGGCGGCGGCGGTGGAGAAGGAGGTCGGGGAGGGTAGGGTTTCGAAGAAGGCGGCGGCGGAGGTGAGCGGCAGCAGCGGCGGAGAGGTGAGTGAGGAGGTGAGGAATGGGGAGGAGGGGGAGAGGAGGACGAGGCCGAAAGGCGAACGGCGGCGATCTTCGAGGCCGAATCCGAGGAACAGTAATCCGCCGAAGCATTTGCAGGGGGAGCAGGTCGCCGCCGGGTGGCCGTCGTGGCTCTCCGCCGTCGCCGGCGAGGCTATTAATGGCTGGACGCCGCGCCGCGCCGACACGTTCGAGAAGCTCGATAAGATTGGGCAAGGTACATACAGTAATGTGTACAAAGCTAGGGATACTTTGACGGGGAAGATTGTTGCGCTAAAGAAGGTTCGGTTTGATAATTTGGAGCCTGAGAGTGTAAAGTTCATGGCCAGAGAGATTCTCATCCTACGACGTTTGGATCATCCGAATGTTATAAAGTTGGAAGGTTTAGTCACGTCAAGGATGTCATGTAGTTTGTACCTTGTATTTGAATATATGGAGCATGATTTGGCAGGACTTGCTGCAAGCCCTGCAATCAAGTTCACAGAGCCTCAGGTTAAATGCTATATGCACCAGTTATTATCGGGTCTTGAACACTGTCACAACCGCAATGTGCTTCATCGTGACATTAAAGGGTCCAATCTTCTTATTGACAATGGTGGAATCTTAAAGATAGCTGATTTTGGATTGGCTTCGTTCTTTGATCCTAATCACAAGCAACCAATGACTAGTAGAGTAGTTACTCTATGGTATCGACCCCCAGAGCTTCTCCTTGGTGCCACTGATTATGGTGTAGGTGTGGACCTCTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTGGCTGGGAAGCCAATCATGCCTGGTCGCACAGAAGTGGAGCAGTTACACAAGATATTCAAGTTATGTGGCTCCCCTTCGGAAGAATATTGGAAAAAGTCAAAGTTGCCACATGCAACCATTTTTAAACCTCAGCAATCATACAAAAGATGCATTGCAGAAACCTTTAAAGACTTTCCACCATCGTCATTGCCTCTGATTGACACCCTCCTTTCAATTGATCCAGCTCAACGTCAGACTGCCACTGCTGCATTGAGGAATGAATTTTTCACAACCAAACCTTATGCTTGTGATCCTTCTAGCCTCCCAAAATATCCACCCAGCAAAGAAATGGATGCTAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCTGCTGGAAAATCTAATGCAGATGGTGTAAGGAGATCTCGGCCACGTGATCGAGCTGTTAGGGGAATTCCTGTTCCGGAAGCCAATGCTGAGCTTCAAGCCAATCTTGATAGGCGGCGTCTAATAACACATGCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCTCCTCCACACCAAGATGGAACACTAGGCTATACTTTAGGTTCTTCAAATCACATTGATCCTGTTTTCGATCCCCCTGATGTTCCATTCAGTTCCACAAACTTCTCATATTCAAAAGAATCCATTCAAACTTGGTCTGGCCCCTTAATAGACCCTGCTGGAGTAGGGGCTCCAAGGAGAAAGAAACACTCATCAGGACAAATTCATTCACAGTCAAAGACCTCAAAAAGAGACCCAAAGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

564

Amino Acids

62.4

Weight (kDa)

9.48

Isoelectric Point (pI)

53.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	111 - 395	1.5e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	114 - 324	4.1e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54610 AT1G54610 AT1G54610 AT3G05050 AT3G05050 AT3G05050
fragaria_vesca	FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100
malus_domestica	MD02G1048200.v1.1 MD04G1216500.v1.1 MD12G1233100.v1.1 MD13G1173900.v1.1 MD16G1175000.v1.1
prunus_persica	Prupe.1G142100_v2.0.a1 Prupe.1G142100_v2.0.a1 Prupe.6G336200_v2.0.a1 Prupe.6G336200_v2.0.a1
pyrus_communis	pycom04g19240 pycom12g21560
rosa_chinensis	RchiOBHm_Chr3g0452651 RchiOBHm_Chr4g0420991
rosa_laevigata	RLG00000007715 RLG00000025575
rosa_multiflora	Rmu_sc0006508.1_g000002 Rmu_ssc0000156.1_g000011
rosa_roxburghii	Rroxscaffold_5G00363340 Rroxscaffold_6G00429690
rosa_rugosa	Rorug02G0642200 Rorug02G0642300 Rorug02G0642300 Rorug02G0642400 Rorug04G0167500 Rorug04G0167500
rosa_samantha	Rh3AG044600 Rh3BG046900 Rh3CG045400 Rh3DG045800 Rh4AG229000 Rh4BG232000 Rh4CG243600 Rh4DG227400
rosa_wichuraiana	Rw3G003480 Rw4G019800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	512
Acc36I	ACCTGC	1 cut(s)	238
AccB1I	GGYRCC	1 cut(s)	854
AccBSI	CCGCTC	1 cut(s)	105
AccII	CGCG	3 cut(s)	26, 316, 321
AccIII	TCCGGA	1 cut(s)	1363
AclWI	GGATC	6 cut(s)	504, 776, 1130, 1202, 1502, 1514
AcoI	YGGCCR	3 cut(s)	263, 465, 1328
AcsI	RAATTY	3 cut(s)	1178, 1353, 1650
AcvI	CACGTG	1 cut(s)	1334
AcyI	GRCGYC	2 cut(s)	311, 1405
AfaI	GTAC	3 cut(s)	361, 377, 557
AfiI	CCNNNNNNNGG	1 cut(s)	261
AflIII	ACRYGT	1 cut(s)	327
AgsI	TTSAA	8 cut(s)	569, 671, 976, 1131, 1385, 1497, 1563, 1577
AhlI	ACTAGT	1 cut(s)	806
AjiI	CACGTC	1 cut(s)	534
AjnI	CCWGG	1 cut(s)	937
AleI	CACNNNNGTG	1 cut(s)	950
AloI	GAACNNNNNNTCC	2 cut(s)	1344, 1376
Alw26I	GTCTC	1 cut(s)	1674
AlwI	GGATC	6 cut(s)	504, 776, 1130, 1202, 1502, 1514
Aor13HI	TCCGGA	1 cut(s)	1363
AoxI	GGCC	6 cut(s)	170, 200, 263, 465, 1328, 1588
ApeKI	GCWGC	7 cut(s)	35, 108, 111, 599, 897, 1163, 1289
ApoI	RAATTY	3 cut(s)	1178, 1353, 1650
AseI	ATTAAT	1 cut(s)	300
Asp700I	GAANNNNTTC	1 cut(s)	1572
AspLEI	GCGC	3 cut(s)	318, 323, 415
AspS9I	GGNCC	3 cut(s)	714, 880, 1589
AsuC2I	CCSGG	1 cut(s)	259
AsuHPI	GGTGA	3 cut(s)	112, 136, 148
AsuII	TTCGAA	1 cut(s)	80
AvaII	GGWCC	2 cut(s)	714, 880
AxyI	CCTNAGG	1 cut(s)	630
BalI	TGGCCA	1 cut(s)	467
BanI	GGYRCC	1 cut(s)	854
BanII	GRGCYC	1 cut(s)	1621
BbrPI	CACGTG	1 cut(s)	1334
BbvCI	CCTCAGC	1 cut(s)	1047
BbvI	GCAGC	7 cut(s)	22, 120, 123, 586, 884, 1150, 1276
BccI	CCATC	3 cut(s)	1105, 1304, 1460
BceAI	ACGGC	3 cut(s)	200, 250, 266
BcgI	CGANNNNNNTGC	2 cut(s)	217, 251
BciT130I	CCWGG	1 cut(s)	939
BciVI	GTATCC	1 cut(s)	382
BcnI	CCSGG	1 cut(s)	259
BcoDI	GTCTC	1 cut(s)	1674
BcuI	ACTAGT	1 cut(s)	806
BfaI	CTAG	5 cut(s)	384, 807, 1215, 1275, 1475
BfuAI	ACCTGC	1 cut(s)	238
BfuI	GTATCC	1 cut(s)	382
BglI	GCCNNNNNGGC	2 cut(s)	271, 293
BglII	AGATCT	1 cut(s)	1322
BlpI	GCTNAGC	2 cut(s)	1254, 1377
Bme1390I	CCNGG	2 cut(s)	259, 939
Bme18I	GGWCC	2 cut(s)	714, 880
BmgBI	CACGTC	1 cut(s)	534
BmgT120I	GGNCC	3 cut(s)	714, 880, 1589
BmiI	GGNNCC	6 cut(s)	444, 715, 856, 988, 1591, 1620
BmrFI	CCNGG	2 cut(s)	259, 939
BmsI	GCATC	2 cut(s)	1055, 1240
BplI	GAGNNNNNCTC	2 cut(s)	462, 494
BpmI	CTGGAG	2 cut(s)	907, 1629
Bpu10I	CCTNAGC	1 cut(s)	1047
Bpu1102I	GCTNAGC	2 cut(s)	1254, 1377
Bpu14I	TTCGAA	1 cut(s)	80
BpuMI	CCSGG	1 cut(s)	259
BsaAI	YACGTR	1 cut(s)	1334
BsaBI	GATNNNNATC	2 cut(s)	479, 786
BsaHI	GRCGYC	2 cut(s)	311, 1405
BsaI	GGTCTC	1 cut(s)	1674
BsaJI	CCNNGG	3 cut(s)	209, 850, 1622
BsaWI	WCCGGW	1 cut(s)	1363
Bsc4I	CCNNNNNNNGG	1 cut(s)	261
Bse118I	RCCGGY	1 cut(s)	287
Bse1I	ACTGG	1 cut(s)	652
Bse21I	CCTNAGG	1 cut(s)	630
Bse3DI	GCAATG	3 cut(s)	694, 1068, 1103
Bse8I	GATNNNNATC	2 cut(s)	479, 786
BseAI	TCCGGA	1 cut(s)	1363
BseBI	CCWGG	1 cut(s)	939
BseDI	CCNNGG	3 cut(s)	209, 850, 1622
BseGI	GGATG	5 cut(s)	480, 499, 546, 1255, 1270
BseJI	GATNNNNATC	2 cut(s)	479, 786
BseLI	CCNNNNNNNGG	1 cut(s)	261
BseMI	GCAATG	3 cut(s)	694, 1068, 1103
BseMII	CTCAG	5 cut(s)	438, 644, 900, 1061, 1368
BseNI	ACTGG	1 cut(s)	652
BseRI	GAGGAG	4 cut(s)	146, 164, 175, 1443
BseXI	GCAGC	7 cut(s)	22, 120, 123, 586, 884, 1150, 1276
BseYI	CCCAGC	2 cut(s)	920, 1235
Bsh1236I	CGCG	3 cut(s)	26, 316, 321
BshFI	GGCC	6 cut(s)	172, 202, 265, 467, 1330, 1590
BshNI	GGYRCC	1 cut(s)	854
BsiSI	CCGG	3 cut(s)	258, 288, 1364
BslI	CCNNNNNNNGG	1 cut(s)	261
BsmAI	GTCTC	1 cut(s)	1674
BsnI	GGCC	6 cut(s)	172, 202, 265, 467, 1330, 1590
Bso31I	GGTCTC	1 cut(s)	1674
Bsp119I	TTCGAA	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	1621
Bsp13I	TCCGGA	1 cut(s)	1363
Bsp1407I	TGTACA	1 cut(s)	375
Bsp143I	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
Bsp1720I	GCTNAGC	2 cut(s)	1254, 1377
BspANI	GGCC	6 cut(s)	172, 202, 265, 467, 1330, 1590
BspCNI	CTCAG	5 cut(s)	439, 643, 901, 1060, 1369
BspEI	TCCGGA	1 cut(s)	1363
BspFNI	CGCG	3 cut(s)	26, 316, 321
BspLI	GGNNCC	6 cut(s)	444, 715, 856, 988, 1591, 1620
BspMI	ACCTGC	1 cut(s)	238
BspPI	GGATC	6 cut(s)	504, 776, 1130, 1202, 1502, 1514
BspT104I	TTCGAA	1 cut(s)	80
BspT107I	GGYRCC	1 cut(s)	854
BspTNI	GGTCTC	1 cut(s)	1674
BsrBI	CCGCTC	1 cut(s)	105
BsrDI	GCAATG	3 cut(s)	694, 1068, 1103
BsrFI	RCCGGY	1 cut(s)	287
BsrGI	TGTACA	1 cut(s)	375
BsrI	ACTGG	1 cut(s)	652
BssAI	RCCGGY	1 cut(s)	287
BssECI	CCNNGG	3 cut(s)	209, 850, 1622
BssMI	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
BssNI	GRCGYC	2 cut(s)	311, 1405
BssT1I	CCWWGG	2 cut(s)	850, 1622
Bst2UI	CCWGG	1 cut(s)	939
Bst4CI	ACNGT	4 cut(s)	218, 368, 677, 1662
BstACI	GRCGYC	2 cut(s)	311, 1405
BstAPI	GCANNNNNTGC	2 cut(s)	596, 608
BstAUI	TGTACA	1 cut(s)	375
BstBAI	YACGTR	1 cut(s)	1334
BstBI	TTCGAA	1 cut(s)	80
BstC8I	GCNNGC	3 cut(s)	289, 604, 895
BstDEI	CTNAG	6 cut(s)	447, 630, 909, 1047, 1254, 1377
BstF5I	GGATG	5 cut(s)	480, 499, 546, 1255, 1270
BstFNI	CGCG	3 cut(s)	26, 316, 321
BstHHI	GCGC	3 cut(s)	318, 323, 415
BstKTI	GATC	9 cut(s)	194, 499, 784, 1138, 1210, 1325, 1339, 1510, 1522
BstMAI	GTCTC	1 cut(s)	1674
BstMBI	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
BstNI	CCWGG	1 cut(s)	939
BstNSI	RCATGY	2 cut(s)	1031, 1421
BstSCI	CCNGG	2 cut(s)	257, 937
BstUI	CGCG	3 cut(s)	26, 316, 321
BstV1I	GCAGC	7 cut(s)	22, 120, 123, 586, 884, 1150, 1276
BstX2I	RGATCY	1 cut(s)	1322
BstYI	RGATCY	1 cut(s)	1322
Bsu36I	CCTNAGG	1 cut(s)	630
BsuI	GTATCC	1 cut(s)	382
BsuRI	GGCC	6 cut(s)	172, 202, 265, 467, 1330, 1590
BtrI	CACGTC	1 cut(s)	534
BtsCI	GGATG	5 cut(s)	480, 499, 546, 1255, 1270
BtsI	GCAGTG	1 cut(s)	1158
BtsIMutI	CAGTG	3 cut(s)	673, 858, 1158
BveI	ACCTGC	1 cut(s)	238
Cac8I	GCNNGC	3 cut(s)	289, 604, 895
CfoI	GCGC	3 cut(s)	318, 323, 415
Cfr10I	RCCGGY	1 cut(s)	287
Cfr13I	GGNCC	3 cut(s)	714, 880, 1589
CseI	GACGC	3 cut(s)	32, 319, 1394
Csp6I	GTAC	3 cut(s)	360, 376, 556
CspCI	CAANNNNNGTGG	2 cut(s)	964, 999
CviAII	CATG	6 cut(s)	463, 546, 581, 934, 1028, 1418
CviQI	GTAC	3 cut(s)	360, 376, 556
DdeI	CTNAG	6 cut(s)	447, 630, 909, 1047, 1254, 1377
DpnI	GATC	9 cut(s)	193, 498, 783, 1137, 1209, 1324, 1338, 1509, 1521
DpnII	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
DraI	TTTAAA	2 cut(s)	1042, 1084
EaeI	YGGCCR	3 cut(s)	263, 465, 1328
EciI	GGCGGA	4 cut(s)	110, 132, 213, 268
Eco130I	CCWWGG	2 cut(s)	850, 1622
Eco24I	GRGCYC	1 cut(s)	1621
Eco31I	GGTCTC	1 cut(s)	1674
Eco47I	GGWCC	2 cut(s)	714, 880
Eco72I	CACGTG	1 cut(s)	1334
Eco81I	CCTNAGG	1 cut(s)	630
EcoRI	GAATTC	1 cut(s)	1353
EcoRII	CCWGG	1 cut(s)	937
EcoT14I	CCWWGG	2 cut(s)	850, 1622
EcoT22I	ATGCAT	1 cut(s)	1070
EcoT38I	GRGCYC	1 cut(s)	1621
ErhI	CCWWGG	2 cut(s)	850, 1622
FaeI	CATG	6 cut(s)	466, 549, 584, 937, 1031, 1421
FalI	AAGNNNNNCTT	2 cut(s)	1377, 1409
FatI	CATG	6 cut(s)	462, 545, 580, 933, 1027, 1417
FokI	GGATG	5 cut(s)	467, 486, 553, 1262, 1277
FriOI	GRGCYC	1 cut(s)	1621
FspBI	CTAG	5 cut(s)	384, 807, 1215, 1275, 1475
GlaI	GCGC	3 cut(s)	317, 322, 414
GsaI	CCCAGC	2 cut(s)	924, 1239
GsuI	CTGGAG	2 cut(s)	907, 1629
HaeIII	GGCC	6 cut(s)	172, 202, 265, 467, 1330, 1590
HapII	CCGG	3 cut(s)	258, 288, 1364
HgaI	GACGC	3 cut(s)	32, 319, 1394
HhaI	GCGC	3 cut(s)	318, 323, 415
Hin1I	GRCGYC	2 cut(s)	311, 1405
Hin1II	CATG	6 cut(s)	466, 549, 584, 937, 1031, 1421
Hin6I	GCGC	3 cut(s)	316, 321, 413
HinP1I	GCGC	3 cut(s)	316, 321, 413
HinfI	GANTC	4 cut(s)	205, 475, 741, 1568
HpaII	CCGG	3 cut(s)	258, 288, 1364
HphI	GGTGA	3 cut(s)	112, 136, 148
Hpy166II	GTNNAC	3 cut(s)	376, 621, 880
Hpy188I	TCNGA	5 cut(s)	210, 504, 997, 1113, 1152
Hpy188III	TCNNGA	7 cut(s)	334, 668, 701, 886, 1364, 1394, 1644
Hpy8I	GTNNAC	3 cut(s)	376, 621, 880
Hpy99I	CGWCG	3 cut(s)	271, 287, 492
HpyAV	CCTTC	6 cut(s)	49, 79, 415, 515, 1002, 1221
HpyCH4III	ACNGT	4 cut(s)	218, 368, 677, 1662
HpyCH4IV	ACGT	5 cut(s)	329, 490, 533, 1147, 1333
HpyF3I	CTNAG	6 cut(s)	447, 630, 909, 1047, 1254, 1377
HpySE526I	ACGT	5 cut(s)	329, 490, 533, 1147, 1333
Hsp92I	GRCGYC	2 cut(s)	311, 1405
Hsp92II	CATG	6 cut(s)	466, 549, 584, 937, 1031, 1421
HspAI	GCGC	3 cut(s)	316, 321, 413
Kpn2I	TCCGGA	1 cut(s)	1363
KroI	GCCGGC	1 cut(s)	287
KroNI	GCCGGC	1 cut(s)	289
Kzo9I	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
LmnI	GCTCC	6 cut(s)	244, 442, 577, 955, 992, 1624
Lsp1109I	GCAGC	7 cut(s)	22, 120, 123, 586, 884, 1150, 1276
LweI	GCATC	2 cut(s)	1055, 1240
MaeI	CTAG	5 cut(s)	384, 807, 1215, 1275, 1475
MaeII	ACGT	5 cut(s)	329, 490, 533, 1147, 1333
MaeIII	GTNAC	5 cut(s)	529, 677, 701, 817, 960
MalI	GATC	9 cut(s)	193, 498, 783, 1137, 1209, 1324, 1338, 1509, 1521
MbiI	CCGCTC	1 cut(s)	105
MboI	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
MboII	GAAGA	8 cut(s)	94, 186, 415, 713, 1010, 1280, 1290, 1485
MfeI	CAATTG	1 cut(s)	1131
MflI	RGATCY	1 cut(s)	1322
MhlI	GDGCHC	1 cut(s)	1621
MlsI	TGGCCA	1 cut(s)	467
MluCI	AATT	5 cut(s)	436, 1131, 1178, 1353, 1650
MluNI	TGGCCA	1 cut(s)	467
MmeI	TCCRAC	1 cut(s)	498
Mox20I	TGGCCA	1 cut(s)	467
Mph1103I	ATGCAT	1 cut(s)	1070
MreI	CGCCGGCG	1 cut(s)	287
MroI	TCCGGA	1 cut(s)	1363
MroNI	GCCGGC	1 cut(s)	287
MroXI	GAANNNNTTC	1 cut(s)	1572
MscI	TGGCCA	1 cut(s)	467
MseI	TTAA	7 cut(s)	300, 636, 708, 746, 1041, 1083, 1595
MslI	CAYNNNNRTG	4 cut(s)	504, 950, 1422, 1464
Msp20I	TGGCCA	1 cut(s)	467
MspA1I	CMGCKG	1 cut(s)	114
MspI	CCGG	3 cut(s)	258, 288, 1364
MspR9I	CCNGG	2 cut(s)	259, 939
MteI	GCGCNGCGC	1 cut(s)	319
MunI	CAATTG	1 cut(s)	1131
MvaI	CCWGG	1 cut(s)	939
MvnI	CGCG	3 cut(s)	26, 316, 321
NaeI	GCCGGC	1 cut(s)	289
NciI	CCSGG	1 cut(s)	259
NdeII	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
NgoMIV	GCCGGC	1 cut(s)	287
NlaIII	CATG	6 cut(s)	466, 549, 584, 937, 1031, 1421
NlaIV	GGNNCC	6 cut(s)	444, 715, 856, 988, 1591, 1620
NmeAIII	GCCGAG	1 cut(s)	1306
NmuCI	GTSAC	3 cut(s)	529, 677, 701
NsiI	ATGCAT	1 cut(s)	1070
NspI	RCATGY	2 cut(s)	1031, 1421
NspV	TTCGAA	1 cut(s)	80
OliI	CACNNNNGTG	1 cut(s)	950
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PdiI	GCCGGC	1 cut(s)	289
PdmI	GAANNNNTTC	1 cut(s)	1572
PfeI	GAWTC	4 cut(s)	205, 475, 741, 1568
PmaCI	CACGTG	1 cut(s)	1334
PmlI	CACGTG	1 cut(s)	1334
Ppu21I	YACGTR	1 cut(s)	1334
PshBI	ATTAAT	1 cut(s)	300
PsiI	TTATAA	1 cut(s)	512
Psp6I	CCWGG	1 cut(s)	937
PspCI	CACGTG	1 cut(s)	1334
PspFI	CCCAGC	2 cut(s)	920, 1235
PspGI	CCWGG	1 cut(s)	937
PspN4I	GGNNCC	6 cut(s)	444, 715, 856, 988, 1591, 1620
PspPI	GGNCC	3 cut(s)	714, 880, 1589
PsuI	RGATCY	1 cut(s)	1322
RsaI	GTAC	3 cut(s)	361, 377, 557
RsaNI	GTAC	3 cut(s)	360, 376, 556
RseI	CAYNNNNRTG	4 cut(s)	504, 950, 1422, 1464
SaqAI	TTAA	7 cut(s)	300, 636, 708, 746, 1041, 1083, 1595
Sau3AI	GATC	9 cut(s)	191, 496, 781, 1135, 1207, 1322, 1336, 1507, 1519
Sau96I	GGNCC	3 cut(s)	714, 880, 1589
ScrFI	CCNGG	2 cut(s)	259, 939
SduI	GDGCHC	1 cut(s)	1621
SfaNI	GCATC	2 cut(s)	1055, 1240
SfuI	TTCGAA	1 cut(s)	80
SgrAI	CRCCGGYG	1 cut(s)	287
SinI	GGWCC	2 cut(s)	714, 880
SmiMI	CAYNNNNRTG	4 cut(s)	504, 950, 1422, 1464
SpeI	ACTAGT	1 cut(s)	806
Sse9I	AATT	5 cut(s)	436, 1131, 1178, 1353, 1650
SspI	AATATT	1 cut(s)	1004
SspMI	CTAG	5 cut(s)	384, 807, 1215, 1275, 1475
StyD4I	CCNGG	2 cut(s)	257, 937
StyI	CCWWGG	2 cut(s)	850, 1622
TaaI	ACNGT	4 cut(s)	218, 368, 677, 1662
TaiI	ACGT	5 cut(s)	332, 493, 536, 1150, 1336
TaqI	TCGA	7 cut(s)	80, 197, 333, 342, 832, 1339, 1518
TasI	AATT	5 cut(s)	436, 1131, 1178, 1353, 1650
TatI	WGTACW	1 cut(s)	375
TfiI	GAWTC	4 cut(s)	205, 475, 741, 1568
Tru1I	TTAA	7 cut(s)	300, 636, 708, 746, 1041, 1083, 1595
Tru9I	TTAA	7 cut(s)	300, 636, 708, 746, 1041, 1083, 1595
TscAI	CASTG	3 cut(s)	680, 865, 1165
TseFI	GTSAC	3 cut(s)	529, 677, 701
TseI	GCWGC	7 cut(s)	35, 108, 111, 599, 897, 1163, 1289
Tsp45I	GTSAC	3 cut(s)	529, 677, 701
TspDTI	ATGAA	5 cut(s)	451, 686, 1191, 1281, 1643
TspRI	CASTG	3 cut(s)	680, 865, 1165
VpaK11BI	GGWCC	2 cut(s)	714, 880
VspI	ATTAAT	1 cut(s)	300
XapI	RAATTY	3 cut(s)	1178, 1353, 1650
XceI	RCATGY	2 cut(s)	1031, 1421
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1243
XmnI	GAANNNNTTC	1 cut(s)	1572
XspI	CTAG	5 cut(s)	384, 807, 1215, 1275, 1475
Zsp2I	ATGCAT	1 cut(s)	1070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.