Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001548

Physical Location & Seq

Genomic Coordinates Reverse (-)

75421488 .. 75424444

Gene Structure 2957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0642400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGAGGAACGTTCAAACCATTATGCAGAAGCAGCAATTCCCCAGAACATGGAAGGAGAAGTTGAATCGGAAGAAAGAGATCCAGAAAGCAATTCACTGATCCAACCACTCCTCAAGAGAAACAGAACACTCTCTTCCAATCCACTGGCTCTGGTTGGAGCCAAAGTCTCCCACATCGAGAGTCTGGACTACGAGATCAATGAGAATGACCTGTTTAAGCACGACTGGAGAAGCAGATCCAAGGTCCAAGTCTTCCAGTATATAATGTTGAAATGGACGCTTGCCTTGCTCATTGGACTTCTAACTGGTCTAATTGCCACTCTCATCAACCTCGCCGTTGAGAATATTGCAGGCTACAAGCTTCTTGCTGTGGTTGCTTACATAGATGAGGAAAGGTACCTGATGGGGTTCATCTTTTTAGCTGTGACAAATCTTCTATTCACCGCAGTTGCCGCTGTTCTCTGCGTGTGTTTTGCACCCACTGCAGCTGGACCTGGTATACCTGAAATCAAAGCTTATCTAAACGGAGTTGATACTCCCAACATGTTTGGTGCCTCCACATTGATCGTCAAGATAGTTGGAAGCATTGGGGCCGTCTCTGCAGGTCTAGATCTTGGAAAAGAAGGACCTCTGGTGCACATCGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGGGGGCCTGACAATTACCGTGTTAAATGGCGCTGCCTTCGCTACATGAATAACGACCGTGACCGCCGGGATCTCATTACCTGTGGGGCCGCCTCTGGGGTCTGTGCAGCTTTCCGATCCCCTGTGGGTGGTGTACTGTTTGCTCTTGAAGAGGTGGCAACATGGTGGAGGAGTGCCCTTCTGTGGAGAACTTTTTTCAGCACAGCCATTGTGGTGGTGGTGCTCAGGGCTTTTATTGAAATATGCAGCACCGGGGAATGTGGCCTTTTTGGAGAAGGAGGGCTTATCATGTTCGATGTCAGCACTGTAACTGTGACATACCGTTGGATGGATATTGTCCCTGTTGTTGTGATTGGCATTATCGGTGGTGTTTTGGGAAGCTTGTACAATTATTTTCTTCACAAGGTCCTCAGACTGTACAATCTCATAAATCAGAAGGGGAAAATTCACAAGATCCTCCTCAGTCTTGTTGTATCACTTTTCACCTCAGCGTGCCTATATGGTCTTCCTTTCCTTGCCAAATGCACACCCTGTGATCCCTCACTTACAGATTCTGTTTGCCCCACCAATGGACGGTCTGGCAACTTCAAACAGTTCAACTGCCCAGATGGCTACTATAATGACTTGGCTACTCTACTGCTTACCACTAATGATGATGCAGTTCGAAACATCTTCTCAACAAACACTTCCACTGAATATCATCCGCTCAACCTTCTAATCTTCTTTGCACTCTACTGCATCTTAGGATTGTTTACTTTTGGAATTGCTGTGCCGTCTGGCCTGTTCCTCCCCATCATCCTTATGGGTGCAGCCTATGGCCGCATGCTTGGTATTGCCATGAAATCGTACACAGACATCGACCAGGGACTATACGCTGTTCTTGGTGCAGCTTCCCTAATGGCAGGGTCGATGAGGATGACTGTATCATTATGTGTGATATTTCTTGAGCTGACCAACAACCTTCTCTTACTACCCATAACAATGATTGTCCTTCTAATTGCAAAAACTGTTGGAGACTGTTTCAACCCAAGCATCTATGAGATTATACTGCACTTAAAAGGTCTACCTTTCTTAGATGCACATCCAGAGCCATGGATGAGGAATCTGAATGTGGGTGAACTTGCAGATGCCAAGCCTCCAGTAGTCACCCTCTGTGGAATCGAAAAGGTGGAACGGATTGTGGAGGTCCTCAGAAACACCACACATAATGGCTTCCCTGTTGTAGATGATGCAGTTGTGCCATCAGTAGGACTAGCTGTTAGGGCAACAGAACTACATGGAATAATACTAAGAGCTCACCTTGTCCAGGTGCTGAAGAAGAAGTGGTTCCTAAAGGAAAGGAGAAGAACAGAGGAGTGGGAAGTGAGAGAGAAGTTTACCGCAGTTGAATTAGCCGAGAGAGAAGGAAAGATTGAGGAGGTGGCTGTGACAAGTGATGAAATGGAGATGTATGTCGATCTGCATCCACTCACCAATACGACACCTCACACAGTGATCGAAAGCATGTCAGTGGCAAAAGCTATGGTGCTTTTCAGACAAGTGGGACTCCGCCATTTGCTCATTCTGCCAAAGTACGAGGCAGCGGGGGTGCCTCCAGTGGTTGGGATCTTAACCAGGCAGGATTTGATAGCCTACAACATTTTGAATGCCTTTCCTCATCTCAAAAATCCCAAAGGCAGAGAGAAGGGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

788

Amino Acids

86.85

Weight (kDa)

6.28

Isoelectric Point (pI)

36.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	148 - 562	3e-77	Voltage gated chloride channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54610 AT1G54610 AT1G54610 AT3G05050 AT3G05050 AT3G05050
fragaria_vesca	FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100
malus_domestica	MD02G1048200.v1.1 MD04G1216500.v1.1 MD12G1233100.v1.1 MD13G1173900.v1.1 MD16G1175000.v1.1
prunus_persica	Prupe.1G142100_v2.0.a1 Prupe.1G142100_v2.0.a1 Prupe.6G336200_v2.0.a1 Prupe.6G336200_v2.0.a1
pyrus_communis	pycom04g19240 pycom12g21560
rosa_chinensis	RchiOBHm_Chr3g0452651 RchiOBHm_Chr4g0420991
rosa_laevigata	RLG00000007715 RLG00000025575
rosa_multiflora	Rmu_sc0006508.1_g000002 Rmu_ssc0000156.1_g000011
rosa_roxburghii	Rroxscaffold_5G00363340 Rroxscaffold_6G00429690
rosa_rugosa	Rorug02G0642200 Rorug02G0642300 Rorug02G0642300 Rorug02G0642400 Rorug04G0167500 Rorug04G0167500
rosa_samantha	Rh3AG044600 Rh3BG046900 Rh3CG045400 Rh3DG045800 Rh4AG229000 Rh4BG232000 Rh4CG243600 Rh4DG227400
rosa_wichuraiana	Rw3G003480 Rw4G019800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	593
Acc65I	GGTACC	1 cut(s)	396
AccB1I	GGYRCC	3 cut(s)	396, 551, 2260
AccB7I	CCANNNNNTGG	2 cut(s)	49, 2273
AccBSI	CCGCTC	1 cut(s)	1378
AccI	GTMKAC	2 cut(s)	499, 1735
AciI	CCGC	9 cut(s)	444, 453, 736, 762, 1376, 1492, 2052, 2221, 2255
AclI	AACGTT	1 cut(s)	10
AclWI	GGATC	8 cut(s)	74, 94, 231, 750, 783, 1120, 1202, 2285
AcoI	YGGCCR	1 cut(s)	1489
AcsI	RAATTY	1 cut(s)	1116
AcuI	CTGAAG	1 cut(s)	2006
AdeI	CACNNNGTG	2 cut(s)	1205, 2164
AfaI	GTAC	6 cut(s)	398, 807, 1058, 1091, 1520, 2246
AflIII	ACRYGT	1 cut(s)	543
AjnI	CCWGG	4 cut(s)	493, 1533, 1977, 2285
Alw21I	GWGCWC	3 cut(s)	639, 897, 1969
Alw26I	GTCTC	3 cut(s)	172, 601, 1680
Alw44I	GTGCAC	1 cut(s)	635
AlwI	GGATC	8 cut(s)	74, 94, 231, 750, 783, 1120, 1202, 2285
AlwNI	CAGNNNCTG	2 cut(s)	1226, 1984
AoxI	GGCC	7 cut(s)	591, 667, 677, 759, 934, 1450, 1489
ApaLI	GTGCAC	1 cut(s)	635
ApeKI	GCWGC	9 cut(s)	32, 485, 648, 705, 779, 918, 1481, 1559, 2252
ApoI	RAATTY	1 cut(s)	1116
Asp700I	GAANNNNTTC	1 cut(s)	1997
Asp718I	GGTACC	1 cut(s)	396
AspLEI	GCGC	1 cut(s)	705
AspS9I	GGNCC	8 cut(s)	244, 491, 591, 626, 677, 759, 1078, 1858
AsuC2I	CCSGG	2 cut(s)	740, 925
AsuHPI	GGTGA	6 cut(s)	433, 1147, 1799, 1810, 1961, 2134
AsuII	TTCGAA	1 cut(s)	1336
AvaII	GGWCC	5 cut(s)	244, 491, 626, 1078, 1858
BaeGI	GKGCMC	2 cut(s)	639, 850
BanI	GGYRCC	3 cut(s)	396, 551, 2260
BanII	GRGCYC	1 cut(s)	1969
BbsI	GAAGAC	2 cut(s)	244, 1169
Bbv12I	GWGCWC	3 cut(s)	639, 897, 1969
BbvCI	CCTCAGC	1 cut(s)	1159
BbvI	GCAGC	9 cut(s)	44, 497, 635, 692, 791, 930, 1493, 1571, 2264
BccI	CCATC	5 cut(s)	397, 994, 1274, 1472, 1921
BceAI	ACGGC	3 cut(s)	320, 578, 1429
BciT130I	CCWGG	4 cut(s)	495, 1535, 1979, 2287
BcnI	CCSGG	2 cut(s)	740, 925
BcoDI	GTCTC	3 cut(s)	172, 601, 1680
BfaI	CTAG	3 cut(s)	608, 665, 1925
BfmI	CTRYAG	2 cut(s)	483, 600
BfoI	RGCGCY	1 cut(s)	706
BfuAI	ACCTGC	1 cut(s)	593
BglI	GCCNNNNNGGC	1 cut(s)	1281
BglII	AGATCT	1 cut(s)	610
Bme1390I	CCNGG	6 cut(s)	495, 740, 925, 1535, 1979, 2287
Bme18I	GGWCC	5 cut(s)	244, 491, 626, 1078, 1858
BmgT120I	GGNCC	8 cut(s)	244, 491, 591, 626, 677, 759, 1078, 1858
BmiI	GGNNCC	8 cut(s)	160, 398, 553, 592, 678, 760, 2000, 2262
BmrFI	CCNGG	6 cut(s)	495, 740, 925, 1535, 1979, 2287
BmsI	GCATC	7 cut(s)	1318, 1419, 1713, 1738, 1789, 1891, 2143
BpiI	GAAGAC	2 cut(s)	244, 1169
BpmI	CTGGAG	3 cut(s)	247, 1794, 2250
Bpu10I	CCTNAGC	2 cut(s)	896, 1159
Bpu14I	TTCGAA	1 cut(s)	1336
BpuEI	CTTGAG	2 cut(s)	98, 1637
BpuMI	CCSGG	2 cut(s)	740, 925
BsaBI	GATNNNNATC	2 cut(s)	1752, 2133
BsaJI	CCNNGG	5 cut(s)	240, 670, 924, 1534, 1763
BsaXI	ACNNNNNCTCC	2 cut(s)	150, 180
Bse1I	ACTGG	6 cut(s)	150, 230, 256, 310, 1811, 2267
Bse3DI	GCAATG	1 cut(s)	651
Bse8I	GATNNNNATC	2 cut(s)	1752, 2133
BseBI	CCWGG	4 cut(s)	495, 1535, 1979, 2287
BseDI	CCNNGG	5 cut(s)	240, 670, 924, 1534, 1763
BseGI	GGATG	7 cut(s)	1005, 1372, 1467, 1593, 1753, 1773, 2134
BseJI	GATNNNNATC	2 cut(s)	1752, 2133
BseMI	GCAATG	1 cut(s)	651
BseMII	CTCAG	5 cut(s)	910, 1096, 1147, 1173, 1876
BseNI	ACTGG	6 cut(s)	150, 230, 256, 310, 1811, 2267
BseRI	GAGGAG	5 cut(s)	101, 856, 1121, 2039, 2102
BseSI	GKGCMC	2 cut(s)	639, 850
BseXI	GCAGC	9 cut(s)	44, 497, 635, 692, 791, 930, 1493, 1571, 2264
BsgI	GTGCAG	4 cut(s)	798, 1500, 1578, 1706
Bsh1285I	CGRYCG	1 cut(s)	730
BshFI	GGCC	7 cut(s)	593, 669, 679, 761, 936, 1452, 1491
BshNI	GGYRCC	3 cut(s)	396, 551, 2260
BsiEI	CGRYCG	1 cut(s)	730
BsiHKAI	GWGCWC	3 cut(s)	639, 897, 1969
BsiSI	CCGG	2 cut(s)	739, 924
BslFI	GGGAC	3 cut(s)	995, 1551, 2229
BsmAI	GTCTC	3 cut(s)	172, 601, 1680
BsmBI	CGTCTC	1 cut(s)	601
BsmFI	GGGAC	3 cut(s)	995, 1551, 2229
BsmI	GAATGC	1 cut(s)	2323
BsnI	GGCC	7 cut(s)	593, 669, 679, 761, 936, 1452, 1491
Bsp119I	TTCGAA	1 cut(s)	1336
Bsp1286I	GDGCHC	4 cut(s)	639, 850, 897, 1969
Bsp1407I	TGTACA	2 cut(s)	1056, 1089
Bsp19I	CCATGG	1 cut(s)	1763
BspACI	CCGC	9 cut(s)	444, 453, 736, 762, 1376, 1492, 2052, 2221, 2255
BspANI	GGCC	7 cut(s)	593, 669, 679, 761, 936, 1452, 1491
BspCNI	CTCAG	5 cut(s)	909, 1095, 1146, 1172, 1875
BspLI	GGNNCC	8 cut(s)	160, 398, 553, 592, 678, 760, 2000, 2262
BspMAI	CTGCAG	2 cut(s)	487, 604
BspMI	ACCTGC	1 cut(s)	593
BspPI	GGATC	8 cut(s)	74, 94, 231, 750, 783, 1120, 1202, 2285
BspT104I	TTCGAA	1 cut(s)	1336
BspT107I	GGYRCC	3 cut(s)	396, 551, 2260
BsrBI	CCGCTC	1 cut(s)	1378
BsrDI	GCAATG	1 cut(s)	651
BsrGI	TGTACA	2 cut(s)	1056, 1089
BsrI	ACTGG	6 cut(s)	150, 230, 256, 310, 1811, 2267
BssECI	CCNNGG	5 cut(s)	240, 670, 924, 1534, 1763
BssNAI	GTATAC	1 cut(s)	500
BssT1I	CCWWGG	3 cut(s)	240, 670, 1763
Bst1107I	GTATAC	1 cut(s)	500
Bst2UI	CCWGG	4 cut(s)	495, 1535, 1979, 2287
Bst6I	CTCTTC	2 cut(s)	139, 816
BstAPI	GCANNNNNTGC	1 cut(s)	482
BstAUI	TGTACA	2 cut(s)	1056, 1089
BstBI	TTCGAA	1 cut(s)	1336
BstC8I	GCNNGC	4 cut(s)	282, 352, 1165, 1496
BstDEI	CTNAG	8 cut(s)	896, 1082, 1133, 1159, 1414, 1744, 1862, 1961
BstDSI	CCRYGG	1 cut(s)	1763
BstENI	CCTNNNNNAGG	1 cut(s)	1976
BstF5I	GGATG	7 cut(s)	1005, 1372, 1467, 1593, 1753, 1773, 2134
BstH2I	RGCGCY	1 cut(s)	706
BstHHI	GCGC	1 cut(s)	705
BstMAI	GTCTC	3 cut(s)	172, 601, 1680
BstMCI	CGRYCG	1 cut(s)	730
BstNI	CCWGG	4 cut(s)	495, 1535, 1979, 2287
BstNSI	RCATGY	3 cut(s)	547, 1498, 2179
BstSCI	CCNGG	6 cut(s)	493, 738, 923, 1533, 1977, 2285
BstSFI	CTRYAG	2 cut(s)	483, 600
BstSLI	GKGCMC	2 cut(s)	639, 850
BstV1I	GCAGC	9 cut(s)	44, 497, 635, 692, 791, 930, 1493, 1571, 2264
BstV2I	GAAGAC	2 cut(s)	244, 1169
BstX2I	RGATCY	6 cut(s)	79, 236, 610, 742, 1125, 2277
BstXI	CCANNNNNNTGG	3 cut(s)	145, 886, 1764
BstYI	RGATCY	6 cut(s)	79, 236, 610, 742, 1125, 2277
BstZ17I	GTATAC	1 cut(s)	500
BsuRI	GGCC	7 cut(s)	593, 669, 679, 761, 936, 1452, 1491
BtgI	CCRYGG	1 cut(s)	1763
BtsCI	GGATG	7 cut(s)	1005, 1372, 1467, 1593, 1753, 1773, 2134
BtsI	GCAGTG	1 cut(s)	480
BtsIMutI	CAGTG	8 cut(s)	95, 143, 480, 975, 1362, 2169, 2187, 2274
BveI	ACCTGC	1 cut(s)	593
Cac8I	GCNNGC	4 cut(s)	282, 352, 1165, 1496
CaiI	CAGNNNCTG	2 cut(s)	1226, 1984
CfoI	GCGC	1 cut(s)	705
Cfr13I	GGNCC	8 cut(s)	244, 491, 591, 626, 677, 759, 1078, 1858
CseI	GACGC	1 cut(s)	286
CsiI	ACCWGGT	1 cut(s)	493
Csp6I	GTAC	6 cut(s)	397, 806, 1057, 1090, 1519, 2245
CviQI	GTAC	6 cut(s)	397, 806, 1057, 1090, 1519, 2245
DdeI	CTNAG	8 cut(s)	896, 1082, 1133, 1159, 1414, 1744, 1862, 1961
DraIII	CACNNNGTG	2 cut(s)	1205, 2164
EaeI	YGGCCR	1 cut(s)	1489
Eam1104I	CTCTTC	2 cut(s)	139, 816
EarI	CTCTTC	2 cut(s)	139, 816
EciI	GGCGGA	1 cut(s)	2210
Ecl136II	GAGCTC	1 cut(s)	1967
Eco130I	CCWWGG	3 cut(s)	240, 670, 1763
Eco24I	GRGCYC	1 cut(s)	1969
Eco47I	GGWCC	5 cut(s)	244, 491, 626, 1078, 1858
Eco53kI	GAGCTC	1 cut(s)	1967
Eco57I	CTGAAG	1 cut(s)	2006
EcoICRI	GAGCTC	1 cut(s)	1967
EcoNI	CCTNNNNNAGG	1 cut(s)	1976
EcoO109I	RGGNCCY	4 cut(s)	626, 677, 1078, 1858
EcoRII	CCWGG	4 cut(s)	493, 1533, 1977, 2285
EcoT14I	CCWWGG	3 cut(s)	240, 670, 1763
EcoT38I	GRGCYC	1 cut(s)	1969
ErhI	CCWWGG	3 cut(s)	240, 670, 1763
Esp3I	CGTCTC	1 cut(s)	601
FalI	AAGNNNNNCTT	2 cut(s)	939, 971
FaqI	GGGAC	3 cut(s)	995, 1551, 2229
FauI	CCCGC	1 cut(s)	2248
FblI	GTMKAC	2 cut(s)	499, 1735
FokI	GGATG	7 cut(s)	1012, 1359, 1454, 1600, 1740, 1780, 2121
FriOI	GRGCYC	1 cut(s)	1969
FspBI	CTAG	3 cut(s)	608, 665, 1925
GlaI	GCGC	1 cut(s)	704
GsuI	CTGGAG	3 cut(s)	247, 1794, 2250
HaeII	RGCGCY	1 cut(s)	706
HaeIII	GGCC	7 cut(s)	593, 669, 679, 761, 936, 1452, 1491
HapII	CCGG	2 cut(s)	739, 924
HgaI	GACGC	1 cut(s)	286
HhaI	GCGC	1 cut(s)	705
Hin6I	GCGC	1 cut(s)	703
HinP1I	GCGC	1 cut(s)	703
HindIII	AAGCTT	3 cut(s)	359, 513, 1051
HinfI	GANTC	6 cut(s)	65, 181, 1223, 1774, 1830, 2217
HpaII	CCGG	2 cut(s)	739, 924
HphI	GGTGA	6 cut(s)	433, 1147, 1799, 1810, 1961, 2134
Hpy166II	GTNNAC	8 cut(s)	500, 637, 806, 1425, 1521, 1736, 1790, 2049
Hpy188I	TCNGA	8 cut(s)	70, 644, 788, 1085, 1107, 1779, 1865, 2207
Hpy188III	TCNNGA	9 cut(s)	83, 115, 178, 185, 571, 608, 818, 1616, 1757
Hpy8I	GTNNAC	8 cut(s)	500, 637, 806, 1425, 1521, 1736, 1790, 2049
HpyCH4IV	ACGT	1 cut(s)	10
HpyF3I	CTNAG	8 cut(s)	896, 1082, 1133, 1159, 1414, 1744, 1862, 1961
HpySE526I	ACGT	1 cut(s)	10
HspAI	GCGC	1 cut(s)	703
KpnI	GGTACC	1 cut(s)	400
LmnI	GCTCC	1 cut(s)	158
Lsp1109I	GCAGC	9 cut(s)	44, 497, 635, 692, 791, 930, 1493, 1571, 2264
LweI	GCATC	7 cut(s)	1318, 1419, 1713, 1738, 1789, 1891, 2143
MabI	ACCWGGT	1 cut(s)	493
MaeI	CTAG	3 cut(s)	608, 665, 1925
MaeII	ACGT	1 cut(s)	10
MaeIII	GTNAC	6 cut(s)	424, 731, 979, 985, 1816, 2098
MbiI	CCGCTC	1 cut(s)	1378
MflI	RGATCY	6 cut(s)	79, 236, 610, 742, 1125, 2277
MhlI	GDGCHC	4 cut(s)	639, 850, 897, 1969
MluCI	AATT	9 cut(s)	36, 91, 312, 685, 1060, 1116, 1434, 1668, 2060
MlyI	GAGTC	2 cut(s)	190, 2211
MmeI	TCCRAC	5 cut(s)	127, 136, 559, 977, 1663
MroXI	GAANNNNTTC	1 cut(s)	1997
MseI	TTAA	4 cut(s)	216, 696, 1727, 2282
MslI	CAYNNNNRTG	4 cut(s)	884, 1472, 1652, 2180
MspA1I	CMGCKG	3 cut(s)	455, 488, 2255
MspI	CCGG	2 cut(s)	739, 924
MspR9I	CCNGG	6 cut(s)	495, 740, 925, 1535, 1979, 2287
Mva1269I	GAATGC	1 cut(s)	2323
MvaI	CCWGG	4 cut(s)	495, 1535, 1979, 2287
NciI	CCSGG	2 cut(s)	740, 925
NcoI	CCATGG	1 cut(s)	1763
NlaIV	GGNNCC	8 cut(s)	160, 398, 553, 592, 678, 760, 2000, 2262
NmeAIII	GCCGAG	1 cut(s)	2092
NmuCI	GTSAC	5 cut(s)	424, 731, 985, 1816, 2098
NspI	RCATGY	3 cut(s)	547, 1498, 2179
NspV	TTCGAA	1 cut(s)	1336
PaeI	GCATGC	1 cut(s)	1498
PciI	ACATGT	1 cut(s)	543
PctI	GAATGC	1 cut(s)	2323
PdmI	GAANNNNTTC	1 cut(s)	1997
PfeI	GAWTC	4 cut(s)	65, 1223, 1774, 1830
PflMI	CCANNNNNTGG	2 cut(s)	49, 2273
PleI	GAGTC	2 cut(s)	189, 2211
PpsI	GAGTC	2 cut(s)	189, 2211
PpuMI	RGGWCCY	3 cut(s)	626, 1078, 1858
PscI	ACATGT	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	1969
Psp1406I	AACGTT	1 cut(s)	10
Psp5II	RGGWCCY	3 cut(s)	626, 1078, 1858
Psp6I	CCWGG	4 cut(s)	493, 1533, 1977, 2285
PspGI	CCWGG	4 cut(s)	493, 1533, 1977, 2285
PspN4I	GGNNCC	8 cut(s)	160, 398, 553, 592, 678, 760, 2000, 2262
PspPI	GGNCC	8 cut(s)	244, 491, 591, 626, 677, 759, 1078, 1858
PspPPI	RGGWCCY	3 cut(s)	626, 1078, 1858
PstI	CTGCAG	2 cut(s)	487, 604
PstNI	CAGNNNCTG	2 cut(s)	1226, 1984
PsuI	RGATCY	6 cut(s)	79, 236, 610, 742, 1125, 2277
PvuII	CAGCTG	1 cut(s)	488
RsaI	GTAC	6 cut(s)	398, 807, 1058, 1091, 1520, 2246
RsaNI	GTAC	6 cut(s)	397, 806, 1057, 1090, 1519, 2245
RseI	CAYNNNNRTG	4 cut(s)	884, 1472, 1652, 2180
SacI	GAGCTC	1 cut(s)	1969
SaqAI	TTAA	4 cut(s)	216, 696, 1727, 2282
Sau96I	GGNCC	8 cut(s)	244, 491, 591, 626, 677, 759, 1078, 1858
SchI	GAGTC	2 cut(s)	190, 2211
ScrFI	CCNGG	6 cut(s)	495, 740, 925, 1535, 1979, 2287
SduI	GDGCHC	4 cut(s)	639, 850, 897, 1969
SexAI	ACCWGGT	1 cut(s)	493
SfaNI	GCATC	7 cut(s)	1318, 1419, 1713, 1738, 1789, 1891, 2143
SfcI	CTRYAG	2 cut(s)	483, 600
SfuI	TTCGAA	1 cut(s)	1336
SinI	GGWCC	5 cut(s)	244, 491, 626, 1078, 1858
SmiMI	CAYNNNNRTG	4 cut(s)	884, 1472, 1652, 2180
SmlI	CTYRAG	2 cut(s)	113, 1616
SmoI	CTYRAG	2 cut(s)	113, 1616
SphI	GCATGC	1 cut(s)	1498
Sse9I	AATT	9 cut(s)	36, 91, 312, 685, 1060, 1116, 1434, 1668, 2060
SsiI	CCGC	9 cut(s)	444, 453, 736, 762, 1376, 1492, 2052, 2221, 2255
SspI	AATATT	1 cut(s)	346
SspMI	CTAG	3 cut(s)	608, 665, 1925
SstI	GAGCTC	1 cut(s)	1969
StyD4I	CCNGG	6 cut(s)	493, 738, 923, 1533, 1977, 2285
StyI	CCWWGG	3 cut(s)	240, 670, 1763
TaiI	ACGT	1 cut(s)	13
TaqI	TCGA	8 cut(s)	177, 966, 1336, 1530, 1580, 1833, 2127, 2169
TasI	AATT	9 cut(s)	36, 91, 312, 685, 1060, 1116, 1434, 1668, 2060
TatI	WGTACW	3 cut(s)	805, 1056, 1089
TauI	GCSGC	3 cut(s)	455, 764, 1494
TfiI	GAWTC	4 cut(s)	65, 1223, 1774, 1830
Tru1I	TTAA	4 cut(s)	216, 696, 1727, 2282
Tru9I	TTAA	4 cut(s)	216, 696, 1727, 2282
TscAI	CASTG	8 cut(s)	102, 150, 487, 982, 1369, 2169, 2187, 2274
TseFI	GTSAC	5 cut(s)	424, 731, 985, 1816, 2098
TseI	GCWGC	9 cut(s)	32, 485, 648, 705, 779, 918, 1481, 1559, 2252
Tsp45I	GTSAC	5 cut(s)	424, 731, 985, 1816, 2098
TspDTI	ATGAA	4 cut(s)	400, 734, 1526, 2124
TspGWI	ACGGA	2 cut(s)	540, 1861
TspRI	CASTG	8 cut(s)	102, 150, 487, 982, 1369, 2169, 2187, 2274
Van91I	CCANNNNNTGG	2 cut(s)	49, 2273
VneI	GTGCAC	1 cut(s)	635
VpaK11BI	GGWCC	5 cut(s)	244, 491, 626, 1078, 1858
XagI	CCTNNNNNAGG	1 cut(s)	1976
XapI	RAATTY	1 cut(s)	1116
XbaI	TCTAGA	1 cut(s)	607
XceI	RCATGY	3 cut(s)	547, 1498, 2179
XcmI	CCANNNNNNNNNTGG	2 cut(s)	886, 1471
XmiI	GTMKAC	2 cut(s)	499, 1735
XmnI	GAANNNNTTC	1 cut(s)	1997
XspI	CTAG	3 cut(s)	608, 665, 1925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.