Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001548

Physical Location & Seq

Genomic Coordinates Forward (+)

75417602 .. 75424868

Gene Structure 7267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0642300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGCCTCTCTGCTTCCTCTCCCCCCGTCTTCCTCCTCCGCCACTCATAACCTGCCGCGTGTCCCAATCCTCACTCCGCACCCTACTTCCTTCTCCGTCACCGTCACCGTCACCGCCGTCTCTCTCACTCTCACTAAGCCCTAACTCAACCCCACCGCCGTCGCTAACCTGCGCCCTCCACTGCCCACACTTCGAACTGTGCTCCGGCTGCACTCACGAGTTCAATCTCCACCGTCCGGCCGTCGTCGACGAGGCTACCGAGTTCTTCAAGTCCCTAGGCCTCTCCGATTTCACATTCGATAGTTGCAAACTGTGGGGATGGCGGTGCCGTGCGAAATTGGCCGTTCGCGGCTCCTCGGAGCACCCTCTGATTGGGCTGTATCAGGAGGGCACTCATAATATAGTTGATATTCCTGACTGCAAAGCTCATCATCCGAATATCAATGCCGCGGTAGAGCTGCTTAAGAAAGGGATTACTGCACTAAAGATTGAGCCATATGACGAAGATGAGGGGACCGGTGATCTGCGATATGTGCAGATGGCTGTGACAACATACAGTACATCTCTTCCTGCTGCCGAAAGATATAGAAATGGTAAAGTGCAGGTATCTTTAGTATGGAATTCGAGAAATGAAACCTCCCCAAATTCAGAGAAACTGCAAGCCTTGGCCAATTTTATATGGAGGAATGGTGGGCCAAGGAACAATGTCCATCTGATTCACTCTGTGTGGGCTAACTTTCAGACATCAAGTAACAATATAATCTTTGGGAATAGATGGAGACATCTTTTAGGAGAAAGAGACTTTTGGGAGCATGTCGGAGGAATTGATATTTCCTTGGCTCCATCCAGTTTTGGCCAAGCAAACACACGGGCATTTGATACCCTGCTCCGGAAGCTACAAAGGTATGTCCCTCTTGGAGCATCTGTTGCTGATTTGTATGCAGGAGCAGGTGTTATCGGATTATCATTGGCTGCTACAAGAAAATGCAGGTCTGTGAGATGCATTGAGATTAACAAAGAATCAAAGCTATCCTTTGAGAAGACGGTTGACCGCCTGTCAAACATAGTAGATAGCAGCATCAGCTGGCATCATGCAGACACTTCTAAGGAACCTCTTTCCTGGATCATGGGATCAGATGTACTTGTTGTTGATCCTCCTAGAAAGGGTCTGGATGCATCTCTTATTGATGCATTGCGGAGTATATCTTCTATAAAGGATAAAGCTAGGTCATCATCTGAGAGTTCAAGCTCTAAGGACAAGGATGAGAAGAGACCATGGATGCTACGTGCAAGAGAAGATTCAATTCAGATTGGAAGCAAAATGACTTCAGAGGATAGCAAAGTGTTGCCTAAAACCCTCATTTATATAAGTTGTGGATGGGAAAGCTTCAAAGAGGATTGTGAAGACTTGTTGTCAAGTAAGGGATGGCGCTTGGAAAAAGCCCATGGCTTTAATTTTTTCCCTGGCACACAGAGCATCGAGGTTTTAGCTGTGTTCAAGAGGGGCCAATCAGTAGACCCAAAGAAAAAGAAATCAGGAAAGAAGAAGAAACGCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

519

Amino Acids

57.68

Weight (kDa)

9.09

Isoelectric Point (pI)

51.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54610 AT1G54610 AT1G54610 AT3G05050 AT3G05050 AT3G05050
fragaria_vesca	FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_4g17190 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100 FvH4_6g04100
malus_domestica	MD02G1048200.v1.1 MD04G1216500.v1.1 MD12G1233100.v1.1 MD13G1173900.v1.1 MD16G1175000.v1.1
prunus_persica	Prupe.1G142100_v2.0.a1 Prupe.1G142100_v2.0.a1 Prupe.6G336200_v2.0.a1 Prupe.6G336200_v2.0.a1
pyrus_communis	pycom04g19240 pycom12g21560
rosa_chinensis	RchiOBHm_Chr3g0452651 RchiOBHm_Chr4g0420991
rosa_laevigata	RLG00000007715 RLG00000025575
rosa_multiflora	Rmu_sc0006508.1_g000002 Rmu_ssc0000156.1_g000011
rosa_roxburghii	Rroxscaffold_5G00363340 Rroxscaffold_6G00429690
rosa_rugosa	Rorug02G0642200 Rorug02G0642300 Rorug02G0642300 Rorug02G0642400 Rorug04G0167500 Rorug04G0167500
rosa_samantha	Rh3AG044600 Rh3BG046900 Rh3CG045400 Rh3DG045800 Rh4AG229000 Rh4BG232000 Rh4CG243600 Rh4DG227400
rosa_wichuraiana	Rw3G003480 Rw4G019800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	938
Acc36I	ACCTGC	5 cut(s)	59, 176, 592, 938, 978
AccB1I	GGYRCC	1 cut(s)	324
AccI	GTMKAC	2 cut(s)	246, 1515
AccII	CGCG	3 cut(s)	57, 348, 449
AccIII	TCCGGA	1 cut(s)	888
AclWI	GGATC	3 cut(s)	1130, 1138, 1145
AcoI	YGGCCR	4 cut(s)	237, 339, 666, 853
AcsI	RAATTY	2 cut(s)	619, 643
AcuI	CTGAAG	1 cut(s)	1311
AdeI	CACNNNGTG	1 cut(s)	724
AfaI	GTAC	2 cut(s)	559, 1140
AfiI	CCNNNNNNNGG	4 cut(s)	235, 371, 888, 1163
AflII	CTTAAG	1 cut(s)	461
AgeI	ACCGGT	1 cut(s)	515
AgsI	TTSAA	6 cut(s)	223, 268, 1245, 1302, 1390, 1498
AhdI	GACNNNNNGTC	2 cut(s)	1054, 1411
AjnI	CCWGG	2 cut(s)	1118, 1462
AluBI	AGCT	9 cut(s)	425, 457, 895, 1027, 1083, 1223, 1248, 1386, 1490
AluI	AGCT	9 cut(s)	425, 457, 895, 1027, 1083, 1223, 1248, 1386, 1490
Alw21I	GWGCWC	2 cut(s)	203, 363
Alw26I	GTCTC	4 cut(s)	123, 772, 792, 1264
AlwI	GGATC	3 cut(s)	1130, 1138, 1145
Aor13HI	TCCGGA	1 cut(s)	888
AoxI	GGCC	7 cut(s)	237, 277, 339, 666, 692, 853, 1504
ApeKI	GCWGC	5 cut(s)	207, 457, 572, 971, 1074
ApoI	RAATTY	2 cut(s)	619, 643
AsiGI	ACCGGT	1 cut(s)	515
AspA2I	CCTAGG	1 cut(s)	274
AspLEI	GCGC	2 cut(s)	173, 1431
AspS9I	GGNCC	3 cut(s)	513, 692, 1504
AsuHPI	GGTGA	4 cut(s)	90, 96, 102, 530
AsuII	TTCGAA	1 cut(s)	192
AvaII	GGWCC	1 cut(s)	513
AvrII	CCTAGG	1 cut(s)	274
BaeGI	GKGCMC	1 cut(s)	392
BalI	TGGCCA	2 cut(s)	668, 855
BanI	GGYRCC	1 cut(s)	324
BauI	CACGAG	1 cut(s)	215
BbsI	GAAGAC	3 cut(s)	20, 1046, 1410
Bbv12I	GWGCWC	2 cut(s)	203, 363
BbvI	GCAGC	5 cut(s)	194, 444, 559, 958, 1086
BccI	CCATC	7 cut(s)	312, 532, 717, 768, 850, 1371, 1419
BceAI	ACGGC	5 cut(s)	100, 142, 224, 312, 326
BciT130I	CCWGG	2 cut(s)	1120, 1464
BcoDI	GTCTC	4 cut(s)	123, 772, 792, 1264
BfaI	CTAG	3 cut(s)	275, 1158, 1224
BfoI	RGCGCY	1 cut(s)	1432
BfrI	CTTAAG	1 cut(s)	461
BfuAI	ACCTGC	5 cut(s)	59, 176, 592, 938, 978
BisI	GCNGC	8 cut(s)	55, 208, 349, 447, 458, 573, 972, 1075
BlnI	CCTAGG	1 cut(s)	274
BlsI	GCNGC	8 cut(s)	56, 209, 350, 448, 459, 574, 973, 1076
Bme1390I	CCNGG	2 cut(s)	1120, 1464
Bme18I	GGWCC	1 cut(s)	513
BmeRI	GACNNNNNGTC	2 cut(s)	1054, 1411
BmgT120I	GGNCC	3 cut(s)	513, 692, 1504
BmiI	GGNNCC	6 cut(s)	326, 352, 514, 840, 1110, 1505
BmrFI	CCNGG	2 cut(s)	1120, 1464
BmsI	GCATC	9 cut(s)	929, 989, 1086, 1096, 1162, 1177, 1184, 1269, 1485
BpiI	GAAGAC	3 cut(s)	20, 1046, 1410
Bpu14I	TTCGAA	1 cut(s)	192
BsaAI	YACGTR	1 cut(s)	1286
BsaI	GGTCTC	1 cut(s)	1264
BsaJI	CCNNGG	9 cut(s)	274, 354, 447, 663, 695, 834, 1274, 1444, 1462
BsaWI	WCCGGW	2 cut(s)	515, 888
BsaXI	ACNNNNNCTCC	6 cut(s)	673, 703, 909, 936, 939, 966
Bsc4I	CCNNNNNNNGG	4 cut(s)	235, 371, 888, 1163
Bse118I	RCCGGY	1 cut(s)	515
Bse1I	ACTGG	1 cut(s)	846
Bse3DI	GCAATG	1 cut(s)	1190
BseAI	TCCGGA	1 cut(s)	888
BseBI	CCWGG	2 cut(s)	1120, 1464
BseDI	CCNNGG	9 cut(s)	274, 354, 447, 663, 695, 834, 1274, 1444, 1462
BseGI	GGATG	8 cut(s)	323, 430, 842, 1177, 1267, 1284, 1382, 1430
BseLI	CCNNNNNNNGG	4 cut(s)	235, 371, 888, 1163
BseMI	GCAATG	1 cut(s)	1190
BseMII	CTCAG	1 cut(s)	1227
BseNI	ACTGG	1 cut(s)	846
BseRI	GAGGAG	2 cut(s)	24, 343
BseSI	GKGCMC	1 cut(s)	392
BseX3I	CGGCCG	1 cut(s)	237
BseXI	GCAGC	5 cut(s)	194, 444, 559, 958, 1086
BsgI	GTGCAG	4 cut(s)	193, 462, 554, 620
Bsh1236I	CGCG	3 cut(s)	57, 348, 449
Bsh1285I	CGRYCG	1 cut(s)	240
BshFI	GGCC	7 cut(s)	239, 279, 341, 668, 694, 855, 1506
BshNI	GGYRCC	1 cut(s)	324
BshTI	ACCGGT	1 cut(s)	515
BsiEI	CGRYCG	1 cut(s)	240
BsiHKAI	GWGCWC	2 cut(s)	203, 363
BsiSI	CCGG	4 cut(s)	204, 236, 516, 889
BslFI	GGGAC	4 cut(s)	46, 256, 526, 893
BslI	CCNNNNNNNGG	4 cut(s)	235, 371, 888, 1163
BsmAI	GTCTC	4 cut(s)	123, 772, 792, 1264
BsmBI	CGTCTC	1 cut(s)	123
BsmFI	GGGAC	4 cut(s)	46, 256, 526, 893
BsnI	GGCC	7 cut(s)	239, 279, 341, 668, 694, 855, 1506
Bso31I	GGTCTC	1 cut(s)	1264
Bsp119I	TTCGAA	1 cut(s)	192
Bsp1286I	GDGCHC	3 cut(s)	203, 363, 392
Bsp13I	TCCGGA	1 cut(s)	888
Bsp143I	GATC	4 cut(s)	520, 1122, 1130, 1150
Bsp19I	CCATGG	2 cut(s)	1274, 1444
BspANI	GGCC	7 cut(s)	239, 279, 341, 668, 694, 855, 1506
BspCNI	CTCAG	1 cut(s)	1228
BspEI	TCCGGA	1 cut(s)	888
BspFNI	CGCG	3 cut(s)	57, 348, 449
BspLI	GGNNCC	6 cut(s)	326, 352, 514, 840, 1110, 1505
BspMI	ACCTGC	5 cut(s)	59, 176, 592, 938, 978
BspPI	GGATC	3 cut(s)	1130, 1138, 1145
BspT104I	TTCGAA	1 cut(s)	192
BspT107I	GGYRCC	1 cut(s)	324
BspTI	CTTAAG	1 cut(s)	461
BspTNI	GGTCTC	1 cut(s)	1264
BsrDI	GCAATG	1 cut(s)	1190
BsrFI	RCCGGY	1 cut(s)	515
BsrI	ACTGG	1 cut(s)	846
BssAI	RCCGGY	1 cut(s)	515
BssECI	CCNNGG	9 cut(s)	274, 354, 447, 663, 695, 834, 1274, 1444, 1462
BssMI	GATC	4 cut(s)	520, 1122, 1130, 1150
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	6 cut(s)	274, 663, 695, 834, 1274, 1444
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	2 cut(s)	1120, 1464
Bst4CI	ACNGT	7 cut(s)	102, 108, 198, 233, 312, 557, 1045
Bst6I	CTCTTC	2 cut(s)	570, 1262
BstAFI	CTTAAG	1 cut(s)	461
BstAPI	GCANNNNNTGC	1 cut(s)	926
BstBAI	YACGTR	1 cut(s)	1286
BstBI	TTCGAA	1 cut(s)	192
BstC8I	GCNNGC	2 cut(s)	660, 1085
BstDEI	CTNAG	4 cut(s)	134, 1104, 1236, 1251
BstDSI	CCRYGG	3 cut(s)	447, 1274, 1444
BstF5I	GGATG	8 cut(s)	323, 430, 842, 1177, 1267, 1284, 1382, 1430
BstFNI	CGCG	3 cut(s)	57, 348, 449
BstH2I	RGCGCY	1 cut(s)	1432
BstHHI	GCGC	2 cut(s)	173, 1431
BstKTI	GATC	4 cut(s)	523, 1125, 1133, 1153
BstMAI	GTCTC	4 cut(s)	123, 772, 792, 1264
BstMBI	GATC	4 cut(s)	520, 1122, 1130, 1150
BstMCI	CGRYCG	1 cut(s)	240
BstMWI	GCNNNNNNNGC	7 cut(s)	207, 338, 532, 892, 926, 1080, 1473
BstNI	CCWGG	2 cut(s)	1120, 1464
BstNSI	RCATGY	1 cut(s)	815
BstSCI	CCNGG	2 cut(s)	1118, 1462
BstSLI	GKGCMC	1 cut(s)	392
BstUI	CGCG	3 cut(s)	57, 348, 449
BstV1I	GCAGC	5 cut(s)	194, 444, 559, 958, 1086
BstV2I	GAAGAC	3 cut(s)	20, 1046, 1410
BstZI	CGGCCG	1 cut(s)	237
BsuRI	GGCC	7 cut(s)	239, 279, 341, 668, 694, 855, 1506
BtgI	CCRYGG	3 cut(s)	447, 1274, 1444
BtsCI	GGATG	8 cut(s)	323, 430, 842, 1177, 1267, 1284, 1382, 1430
BtsI	GCAGTG	1 cut(s)	178
BtsIMutI	CAGTG	1 cut(s)	178
BveI	ACCTGC	5 cut(s)	59, 176, 592, 938, 978
Cac8I	GCNNGC	2 cut(s)	660, 1085
CfoI	GCGC	2 cut(s)	173, 1431
Cfr10I	RCCGGY	1 cut(s)	515
Cfr13I	GGNCC	3 cut(s)	513, 692, 1504
Cfr42I	CCGCGG	1 cut(s)	450
Csp6I	GTAC	2 cut(s)	558, 1139
CspAI	ACCGGT	1 cut(s)	515
CviAII	CATG	5 cut(s)	812, 1091, 1126, 1275, 1445
CviQI	GTAC	2 cut(s)	558, 1139
DdeI	CTNAG	4 cut(s)	134, 1104, 1236, 1251
DpnI	GATC	4 cut(s)	522, 1124, 1132, 1152
DpnII	GATC	4 cut(s)	520, 1122, 1130, 1150
DraIII	CACNNNGTG	1 cut(s)	724
DriI	GACNNNNNGTC	2 cut(s)	1054, 1411
EaeI	YGGCCR	4 cut(s)	237, 339, 666, 853
EagI	CGGCCG	1 cut(s)	237
Eam1104I	CTCTTC	2 cut(s)	570, 1262
Eam1105I	GACNNNNNGTC	2 cut(s)	1054, 1411
EarI	CTCTTC	2 cut(s)	570, 1262
EciI	GGCGGA	1 cut(s)	27
EclXI	CGGCCG	1 cut(s)	237
Eco130I	CCWWGG	6 cut(s)	274, 663, 695, 834, 1274, 1444
Eco147I	AGGCCT	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	1264
Eco47I	GGWCC	1 cut(s)	513
Eco52I	CGGCCG	1 cut(s)	237
Eco57I	CTGAAG	1 cut(s)	1311
EcoRI	GAATTC	1 cut(s)	619
EcoRII	CCWGG	2 cut(s)	1118, 1462
EcoT14I	CCWWGG	6 cut(s)	274, 663, 695, 834, 1274, 1444
EcoT22I	ATGCAT	3 cut(s)	1004, 1177, 1192
ErhI	CCWWGG	6 cut(s)	274, 663, 695, 834, 1274, 1444
Esp3I	CGTCTC	1 cut(s)	123
FaeI	CATG	5 cut(s)	815, 1094, 1129, 1278, 1448
FalI	AAGNNNNNCTT	3 cut(s)	1016, 1048, 1538
FaqI	GGGAC	4 cut(s)	46, 256, 526, 893
FatI	CATG	5 cut(s)	811, 1090, 1125, 1274, 1444
FauNDI	CATATG	1 cut(s)	496
FblI	GTMKAC	2 cut(s)	246, 1515
Fnu4HI	GCNGC	8 cut(s)	55, 208, 349, 447, 458, 573, 972, 1075
FokI	GGATG	8 cut(s)	330, 417, 829, 1184, 1274, 1291, 1389, 1437
Fsp4HI	GCNGC	8 cut(s)	55, 208, 349, 447, 458, 573, 972, 1075
FspBI	CTAG	3 cut(s)	275, 1158, 1224
GlaI	GCGC	2 cut(s)	172, 1430
GluI	GCNGC	8 cut(s)	55, 208, 349, 447, 458, 573, 972, 1075
HaeII	RGCGCY	1 cut(s)	1432
HaeIII	GGCC	7 cut(s)	239, 279, 341, 668, 694, 855, 1506
HapII	CCGG	4 cut(s)	204, 236, 516, 889
HhaI	GCGC	2 cut(s)	173, 1431
Hin1II	CATG	5 cut(s)	815, 1094, 1129, 1278, 1448
Hin6I	GCGC	2 cut(s)	171, 1429
HinP1I	GCGC	2 cut(s)	171, 1429
HincII	GTYRAC	2 cut(s)	247, 1048
HindII	GTYRAC	2 cut(s)	247, 1048
HindIII	AAGCTT	1 cut(s)	1384
HinfI	GANTC	3 cut(s)	715, 1019, 1298
HpaII	CCGG	4 cut(s)	204, 236, 516, 889
HphI	GGTGA	4 cut(s)	90, 96, 102, 530
Hpy166II	GTNNAC	3 cut(s)	247, 1048, 1516
Hpy188III	TCNNGA	8 cut(s)	215, 383, 413, 624, 889, 1169, 1498, 1536
Hpy8I	GTNNAC	3 cut(s)	247, 1048, 1516
Hpy99I	CGWCG	4 cut(s)	163, 245, 248, 251
HpyAV	CCTTC	1 cut(s)	99
HpyCH4III	ACNGT	7 cut(s)	102, 108, 198, 233, 312, 557, 1045
HpyCH4IV	ACGT	1 cut(s)	1285
HpyF10VI	GCNNNNNNNGC	7 cut(s)	207, 338, 532, 892, 926, 1080, 1473
HpyF3I	CTNAG	4 cut(s)	134, 1104, 1236, 1251
HpySE526I	ACGT	1 cut(s)	1285
Hsp92II	CATG	5 cut(s)	815, 1094, 1129, 1278, 1448
HspAI	GCGC	2 cut(s)	171, 1429
Kpn2I	TCCGGA	1 cut(s)	888
KspI	CCGCGG	1 cut(s)	450
Kzo9I	GATC	4 cut(s)	520, 1122, 1130, 1150
LmnI	GCTCC	8 cut(s)	206, 356, 358, 808, 844, 891, 917, 944
Lsp1109I	GCAGC	5 cut(s)	194, 444, 559, 958, 1086
LweI	GCATC	9 cut(s)	929, 989, 1086, 1096, 1162, 1177, 1184, 1269, 1485
MaeI	CTAG	3 cut(s)	275, 1158, 1224
MaeII	ACGT	1 cut(s)	1285
MaeIII	GTNAC	5 cut(s)	96, 102, 108, 544, 749
MalI	GATC	4 cut(s)	522, 1124, 1132, 1152
MboI	GATC	4 cut(s)	520, 1122, 1130, 1150
MhlI	GDGCHC	3 cut(s)	203, 363, 392
MlsI	TGGCCA	2 cut(s)	668, 855
MluCI	AATT	7 cut(s)	335, 619, 643, 670, 822, 1302, 1453
MluNI	TGGCCA	2 cut(s)	668, 855
MmeI	TCCRAC	1 cut(s)	796
Mox20I	TGGCCA	2 cut(s)	668, 855
Mph1103I	ATGCAT	3 cut(s)	1004, 1177, 1192
MroI	TCCGGA	1 cut(s)	888
MscI	TGGCCA	2 cut(s)	668, 855
MseI	TTAA	3 cut(s)	462, 1011, 1452
Msp20I	TGGCCA	2 cut(s)	668, 855
MspA1I	CMGCKG	2 cut(s)	449, 1083
MspCI	CTTAAG	1 cut(s)	461
MspI	CCGG	4 cut(s)	204, 236, 516, 889
MspR9I	CCNGG	2 cut(s)	1120, 1464
MvaI	CCWGG	2 cut(s)	1120, 1464
MvnI	CGCG	3 cut(s)	57, 348, 449
MwoI	GCNNNNNNNGC	7 cut(s)	207, 338, 532, 892, 926, 1080, 1473
NcoI	CCATGG	2 cut(s)	1274, 1444
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	4 cut(s)	520, 1122, 1130, 1150
NlaIII	CATG	5 cut(s)	815, 1094, 1129, 1278, 1448
NlaIV	GGNNCC	6 cut(s)	326, 352, 514, 840, 1110, 1505
NmuCI	GTSAC	4 cut(s)	96, 102, 108, 544
NsiI	ATGCAT	3 cut(s)	1004, 1177, 1192
NspI	RCATGY	1 cut(s)	815
NspV	TTCGAA	1 cut(s)	192
PaqCI	CACCTGC	1 cut(s)	938
PceI	AGGCCT	1 cut(s)	279
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PfeI	GAWTC	3 cut(s)	715, 1019, 1298
PfoI	TCCNGGA	1 cut(s)	1118
PinAI	ACCGGT	1 cut(s)	515
PkrI	GCNGC	8 cut(s)	56, 209, 350, 448, 459, 574, 973, 1076
Ppu21I	YACGTR	1 cut(s)	1286
Psp6I	CCWGG	2 cut(s)	1118, 1462
PspGI	CCWGG	2 cut(s)	1118, 1462
PspN4I	GGNNCC	6 cut(s)	326, 352, 514, 840, 1110, 1505
PspPI	GGNCC	3 cut(s)	513, 692, 1504
PvuII	CAGCTG	1 cut(s)	1083
RsaI	GTAC	2 cut(s)	559, 1140
RsaNI	GTAC	2 cut(s)	558, 1139
SacII	CCGCGG	1 cut(s)	450
SalI	GTCGAC	1 cut(s)	245
SaqAI	TTAA	3 cut(s)	462, 1011, 1452
SatI	GCNGC	8 cut(s)	55, 208, 349, 447, 458, 573, 972, 1075
Sau3AI	GATC	4 cut(s)	520, 1122, 1130, 1150
Sau96I	GGNCC	3 cut(s)	513, 692, 1504
ScrFI	CCNGG	2 cut(s)	1120, 1464
SduI	GDGCHC	3 cut(s)	203, 363, 392
SfaNI	GCATC	9 cut(s)	929, 989, 1086, 1096, 1162, 1177, 1184, 1269, 1485
Sfr303I	CCGCGG	1 cut(s)	450
SfuI	TTCGAA	1 cut(s)	192
SgrBI	CCGCGG	1 cut(s)	450
SgrDI	CGTCGACG	1 cut(s)	245
SinI	GGWCC	1 cut(s)	513
SmlI	CTYRAG	1 cut(s)	461
SmoI	CTYRAG	1 cut(s)	461
Sse9I	AATT	7 cut(s)	335, 619, 643, 670, 822, 1302, 1453
SseBI	AGGCCT	1 cut(s)	279
SspMI	CTAG	3 cut(s)	275, 1158, 1224
StuI	AGGCCT	1 cut(s)	279
StyD4I	CCNGG	2 cut(s)	1118, 1462
StyI	CCWWGG	6 cut(s)	274, 663, 695, 834, 1274, 1444
TaaI	ACNGT	7 cut(s)	102, 108, 198, 233, 312, 557, 1045
TaiI	ACGT	1 cut(s)	1288
TaqI	TCGA	5 cut(s)	192, 246, 297, 623, 1479
TasI	AATT	7 cut(s)	335, 619, 643, 670, 822, 1302, 1453
TatI	WGTACW	2 cut(s)	557, 1138
TauI	GCSGC	3 cut(s)	57, 351, 449
TfiI	GAWTC	3 cut(s)	715, 1019, 1298
Tru1I	TTAA	3 cut(s)	462, 1011, 1452
Tru9I	TTAA	3 cut(s)	462, 1011, 1452
TscAI	CASTG	1 cut(s)	185
TseFI	GTSAC	4 cut(s)	96, 102, 108, 544
TseI	GCWGC	5 cut(s)	207, 457, 572, 971, 1074
Tsp45I	GTSAC	4 cut(s)	96, 102, 108, 544
TspDTI	ATGAA	1 cut(s)	645
TspGWI	ACGGA	1 cut(s)	84
TspRI	CASTG	1 cut(s)	185
Vha464I	CTTAAG	1 cut(s)	461
VpaK11BI	GGWCC	1 cut(s)	513
XapI	RAATTY	2 cut(s)	619, 643
XceI	RCATGY	1 cut(s)	815
XmaJI	CCTAGG	1 cut(s)	274
XmiI	GTMKAC	2 cut(s)	246, 1515
XspI	CTAG	3 cut(s)	275, 1158, 1224
Zsp2I	ATGCAT	3 cut(s)	1004, 1177, 1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.