Rmu_ssc0000156.1_g000011

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000156.1
Physical Location & Seq
Reverse (-)
55448 .. 58911
3464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000156.1_g000011.1.cds

Sequence Viewer

Length: 1329 bp
atgttgacggggaaaattgttgctctaaagaaagttagatttgacaatttggaacctgagagtgtgaagtttatggctagagaaatcctaattttgcggagattagatcatactaatgttgtgaagttggagggtctggtcacttcaaggatgtcatgtagtttgtacctggtgttggaatatatggaacatgacctagctggacttgctgcaagcccagaaattaagtttacagaagcacaggtcaaatgttatatgcaccaactattatctggacttgagcactgtcacaaccgtggtgtgcttcatcgtgacataaagggatccaatcttctgattgacaacggaggagtacttaagattgctgactttggcttggcttctttctacgatccaaagcacaagcatcccatgactagtcgggtggttactctatggtatcgacctcctgagcttcttctaggggctactgattatagtgtgggtgtggacctttggagtgccggttgcattttagcagagttactagctgggaagcctatcatgcctggtcgtactgaggtagaacaactccacaagatatacaaactatgcggctcacctacagatgagtactggaaaaaagcaaagttaccgaatgcaactttatttaagccccgagagccttacaaaagaagcataagagagactttcaaagatttccccccatcagcactgcctctaattgaaagtttacttgcgattgatcccgcagagcgtcagacagcctcagctgcattgagtagtgagtttttcatgacagagccttatgcttgtgaaccttctagcctcccaaagtatcccccaaccaaagaaattgatgctaaacgtcgagacgatgaagctcgtaggataagagctgctggtagagcccaggctgatggtgcaaagaaaacacgtacacgtgaacgtggtcctaggactatggcagctccagaagccaatgcagagattcaatctaatatcgatagaaggagactaattacacataatgcaaagagtaaaagcgaaaagtttcctccaccgcaccaagatggggcagttggttacccattaggggcttcgcatcatattgatcctgcgcttgttcctcctgatgtcccattcagtacaacctcatttggttatcctaaagaaccaatacaaacatggtcaggtcctttggttgactccactggtccaagaaggaagaaacataccgatgcacgagaaccttcaaagtcctttgtaggaactcataaagataaacatcatgatgtgcgagttagaggaaagaaaagtgcagcttaa

Protein Analysis

442

Amino Acids

49.43

Weight (kDa)

9.39

Isoelectric Point (pI)

52.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 97, 594, 750, 1064
AclWI GGATC 5 cut(s) 318, 331, 386, 740, 1109
AcvI CACGTG 1 cut(s) 944
AfaI GTAC 6 cut(s) 167, 354, 556, 614, 940, 1150
AfiI CCNNNNNNNGG 3 cut(s) 175, 1075, 1096
AflII CTTAAG 1 cut(s) 356
AflIII ACRYGT 2 cut(s) 935, 941
AgsI TTSAA 5 cut(s) 147, 694, 728, 995, 1257
AhlI ACTAGT 1 cut(s) 416
AjnI CCWGG 3 cut(s) 168, 547, 912
AleI CACNNNNGTG 1 cut(s) 294
AluBI AGCT 8 cut(s) 200, 454, 530, 773, 884, 899, 971, 1325
AluI AGCT 8 cut(s) 200, 454, 530, 773, 884, 899, 971, 1325
Alw21I GWGCWC 1 cut(s) 285
Alw26I GTCTC 3 cut(s) 680, 867, 1009
AlwI GGATC 5 cut(s) 318, 331, 386, 740, 1109
Ama87I CYCGRG 1 cut(s) 657
ApeKI GCWGC 5 cut(s) 209, 773, 899, 968, 1322
Asp700I GAANNNNTTC 1 cut(s) 1053
AspA2I CCTAGG 1 cut(s) 956
AspLEI GCGC 1 cut(s) 1123
AspS9I GGNCC 4 cut(s) 490, 953, 1196, 1217
AsuHPI GGTGA 1 cut(s) 591
AvaI CYCGRG 1 cut(s) 657
AvaII GGWCC 4 cut(s) 490, 953, 1196, 1217
AvrII CCTAGG 1 cut(s) 956
BamHI GGATCC 1 cut(s) 323
BanII GRGCYC 1 cut(s) 913
BauI CACGAG 1 cut(s) 1245
BbrPI CACGTG 1 cut(s) 944
Bbv12I GWGCWC 1 cut(s) 285
BbvCI CCTCAGC 1 cut(s) 769
BbvI GCAGC 4 cut(s) 196, 760, 886, 980
BccI CCATC 3 cut(s) 715, 914, 1067
BciT130I CCWGG 3 cut(s) 170, 549, 914
BciVI GTATCC 1 cut(s) 849
BcoDI GTCTC 3 cut(s) 680, 867, 1009
BcuI ACTAGT 1 cut(s) 416
BfaI CTAG 7 cut(s) 78, 197, 417, 461, 527, 825, 957
BfmI CTRYAG 1 cut(s) 603
BfrI CTTAAG 1 cut(s) 356
BfuI GTATCC 1 cut(s) 849
BisI GCNGC 6 cut(s) 210, 595, 774, 900, 969, 1323
BlnI CCTAGG 1 cut(s) 956
BlsI GCNGC 6 cut(s) 211, 596, 775, 901, 970, 1324
BmcAI AGTACT 2 cut(s) 354, 614
Bme1390I CCNGG 3 cut(s) 170, 549, 914
Bme18I GGWCC 4 cut(s) 490, 953, 1196, 1217
BmeT110I CYCGRG 1 cut(s) 657
BmgT120I GGNCC 4 cut(s) 490, 953, 1196, 1217
BmiI GGNNCC 2 cut(s) 54, 325
BmrFI CCNGG 3 cut(s) 170, 549, 914
BmsI GCATC 4 cut(s) 415, 850, 1114, 1231
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 2 cut(s) 450, 769
BpuEI CTTGAG 1 cut(s) 299
Bsa29I ATCGAT 1 cut(s) 1005
BsaAI YACGTR 2 cut(s) 938, 944
BsaBI GATNNNNATC 1 cut(s) 1287
BsaJI CCNNGG 3 cut(s) 295, 912, 956
BsaXI ACNNNNNCTCC 2 cut(s) 490, 520
Bsc4I CCNNNNNNNGG 3 cut(s) 175, 1075, 1096
Bse118I RCCGGY 1 cut(s) 503
Bse1I ACTGG 2 cut(s) 620, 1219
Bse8I GATNNNNATC 1 cut(s) 1287
BseBI CCWGG 3 cut(s) 170, 549, 914
BseCI ATCGAT 1 cut(s) 1005
BseDI CCNNGG 3 cut(s) 295, 912, 956
BseGI GGATG 2 cut(s) 156, 406
BseJI GATNNNNATC 1 cut(s) 1287
BseLI CCNNNNNNNGG 3 cut(s) 175, 1075, 1096
BseMII CTCAG 4 cut(s) 48, 441, 549, 783
BseNI ACTGG 2 cut(s) 620, 1219
BseRI GAGGAG 1 cut(s) 363
BseXI GCAGC 4 cut(s) 196, 760, 886, 980
BseYI CCCAGC 1 cut(s) 530
BshVI ATCGAT 1 cut(s) 1005
BsiHKAI GWGCWC 1 cut(s) 285
BsiHKCI CYCGRG 1 cut(s) 657
BsiSI CCGG 1 cut(s) 504
BslFI GGGAC 1 cut(s) 1124
BslI CCNNNNNNNGG 3 cut(s) 175, 1075, 1096
BsmAI GTCTC 3 cut(s) 680, 867, 1009
BsmBI CGTCTC 1 cut(s) 867
BsmFI GGGAC 1 cut(s) 1124
BsmI GAATGC 1 cut(s) 643
BsoBI CYCGRG 1 cut(s) 657
Bsp1286I GDGCHC 2 cut(s) 285, 913
Bsp143I GATC 5 cut(s) 106, 323, 391, 745, 1114
BspACI CCGC 4 cut(s) 97, 594, 750, 1064
BspCNI CTCAG 4 cut(s) 49, 442, 550, 782
BspDI ATCGAT 1 cut(s) 1005
BspHI TCATGA 2 cut(s) 795, 1291
BspLI GGNNCC 2 cut(s) 54, 325
BspPI GGATC 5 cut(s) 318, 331, 386, 740, 1109
BspTI CTTAAG 1 cut(s) 356
BsrFI RCCGGY 1 cut(s) 503
BsrI ACTGG 2 cut(s) 620, 1219
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 3 cut(s) 295, 912, 956
BssMI GATC 5 cut(s) 106, 323, 391, 745, 1114
BssSI CACGAG 1 cut(s) 1245
BssT1I CCWWGG 1 cut(s) 956
Bst2BI CACGAG 1 cut(s) 1245
Bst2UI CCWGG 3 cut(s) 170, 549, 914
Bst4CI ACNGT 2 cut(s) 287, 296
BstAFI CTTAAG 1 cut(s) 356
BstBAI YACGTR 2 cut(s) 938, 944
BstC8I GCNNGC 1 cut(s) 214
BstDEI CTNAG 4 cut(s) 57, 450, 558, 769
BstDSI CCRYGG 1 cut(s) 295
BstEII GGTNACC 1 cut(s) 1085
BstF5I GGATG 2 cut(s) 156, 406
BstHHI GCGC 1 cut(s) 1123
BstKTI GATC 5 cut(s) 109, 326, 394, 748, 1117
BstMAI GTCTC 3 cut(s) 680, 867, 1009
BstMBI GATC 5 cut(s) 106, 323, 391, 745, 1114
BstMWI GCNNNNNNNGC 7 cut(s) 206, 544, 661, 773, 908, 923, 977
BstNI CCWGG 3 cut(s) 170, 549, 914
BstPI GGTNACC 1 cut(s) 1085
BstSCI CCNGG 3 cut(s) 168, 547, 912
BstSFI CTRYAG 1 cut(s) 603
BstV1I GCAGC 4 cut(s) 196, 760, 886, 980
BstX2I RGATCY 1 cut(s) 323
BstXI CCANNNNNNTGG 1 cut(s) 920
BstYI RGATCY 1 cut(s) 323
Bsu15I ATCGAT 1 cut(s) 1005
BsuI GTATCC 1 cut(s) 849
BsuTUI ATCGAT 1 cut(s) 1005
BtgI CCRYGG 1 cut(s) 295
BtsCI GGATG 2 cut(s) 156, 406
BtsI GCAGTG 1 cut(s) 713
BtsIMutI CAGTG 3 cut(s) 283, 713, 1212
Cac8I GCNNGC 1 cut(s) 214
CciI TCATGA 2 cut(s) 795, 1291
CfoI GCGC 1 cut(s) 1123
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 4 cut(s) 490, 953, 1196, 1217
ClaI ATCGAT 1 cut(s) 1005
CseI GACGC 1 cut(s) 746
CsiI ACCWGGT 1 cut(s) 168
Csp6I GTAC 6 cut(s) 166, 353, 555, 613, 939, 1149
CviAII CATG 7 cut(s) 156, 191, 412, 544, 796, 1188, 1292
CviQI GTAC 6 cut(s) 166, 353, 555, 613, 939, 1149
DdeI CTNAG 4 cut(s) 57, 450, 558, 769
DpnI GATC 5 cut(s) 108, 325, 393, 747, 1116
DpnII GATC 5 cut(s) 106, 323, 391, 745, 1114
Eco130I CCWWGG 1 cut(s) 956
Eco24I GRGCYC 1 cut(s) 913
Eco47I GGWCC 4 cut(s) 490, 953, 1196, 1217
Eco72I CACGTG 1 cut(s) 944
Eco88I CYCGRG 1 cut(s) 657
Eco91I GGTNACC 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 1196
EcoO65I GGTNACC 1 cut(s) 1085
EcoRII CCWGG 3 cut(s) 168, 547, 912
EcoT14I CCWWGG 1 cut(s) 956
EcoT38I GRGCYC 1 cut(s) 913
ErhI CCWWGG 1 cut(s) 956
Esp3I CGTCTC 1 cut(s) 867
FaeI CATG 7 cut(s) 159, 194, 415, 547, 799, 1191, 1295
FalI AAGNNNNNCTT 3 cut(s) 673, 705, 1309
FaqI GGGAC 1 cut(s) 1124
FatI CATG 7 cut(s) 155, 190, 411, 543, 795, 1187, 1291
FauI CCCGC 1 cut(s) 757
Fnu4HI GCNGC 6 cut(s) 210, 595, 774, 900, 969, 1323
FokI GGATG 2 cut(s) 163, 393
FriOI GRGCYC 1 cut(s) 913
Fsp4HI GCNGC 6 cut(s) 210, 595, 774, 900, 969, 1323
FspBI CTAG 7 cut(s) 78, 197, 417, 461, 527, 825, 957
GlaI GCGC 1 cut(s) 1122
GluI GCNGC 6 cut(s) 210, 595, 774, 900, 969, 1323
GsaI CCCAGC 1 cut(s) 534
GsuI CTGGAG 1 cut(s) 957
HapII CCGG 1 cut(s) 504
HgaI GACGC 1 cut(s) 746
HhaI GCGC 1 cut(s) 1123
Hin1II CATG 7 cut(s) 159, 194, 415, 547, 799, 1191, 1295
Hin6I GCGC 1 cut(s) 1121
HinP1I GCGC 1 cut(s) 1121
HincII GTYRAC 2 cut(s) 6, 1207
HindII GTYRAC 2 cut(s) 6, 1207
HinfI GANTC 2 cut(s) 991, 1208
HpaII CCGG 1 cut(s) 504
HphI GGTGA 1 cut(s) 591
Hpy166II GTNNAC 8 cut(s) 6, 231, 490, 734, 818, 941, 947, 1207
Hpy188I TCNGA 2 cut(s) 336, 762
Hpy188III TCNNGA 8 cut(s) 273, 311, 449, 796, 872, 974, 1133, 1292
Hpy8I GTNNAC 8 cut(s) 6, 231, 490, 734, 818, 941, 947, 1207
Hpy99I CGWCG 1 cut(s) 873
HpyAV CCTTC 4 cut(s) 831, 1005, 1218, 1263
HpyCH4III ACNGT 2 cut(s) 287, 296
HpyCH4IV ACGT 4 cut(s) 868, 937, 943, 949
HpyF10VI GCNNNNNNNGC 7 cut(s) 206, 544, 661, 773, 908, 923, 977
HpyF3I CTNAG 4 cut(s) 57, 450, 558, 769
HpySE526I ACGT 4 cut(s) 868, 937, 943, 949
Hsp92II CATG 7 cut(s) 159, 194, 415, 547, 799, 1191, 1295
HspAI GCGC 1 cut(s) 1121
Kzo9I GATC 5 cut(s) 106, 323, 391, 745, 1114
LmnI GCTCC 1 cut(s) 976
Lsp1109I GCAGC 4 cut(s) 196, 760, 886, 980
LweI GCATC 4 cut(s) 415, 850, 1114, 1231
MabI ACCWGGT 1 cut(s) 168
MaeI CTAG 7 cut(s) 78, 197, 417, 461, 527, 825, 957
MaeII ACGT 4 cut(s) 868, 937, 943, 949
MaeIII GTNAC 7 cut(s) 139, 287, 311, 427, 522, 630, 1085
MalI GATC 5 cut(s) 108, 325, 393, 747, 1116
MboI GATC 5 cut(s) 106, 323, 391, 745, 1114
MboII GAAGA 3 cut(s) 323, 449, 1240
MflI RGATCY 1 cut(s) 323
MhlI GDGCHC 2 cut(s) 285, 913
MluCI AATT 7 cut(s) 15, 46, 90, 222, 723, 855, 1020
MlyI GAGTC 1 cut(s) 1202
MmeI TCCRAC 2 cut(s) 108, 156
MroXI GAANNNNTTC 1 cut(s) 1053
MseI TTAA 4 cut(s) 225, 357, 651, 1327
MslI CAYNNNNRTG 5 cut(s) 114, 294, 1071, 1239, 1293
MspA1I CMGCKG 1 cut(s) 773
MspCI CTTAAG 1 cut(s) 356
MspI CCGG 1 cut(s) 504
MspR9I CCNGG 3 cut(s) 170, 549, 914
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 3 cut(s) 170, 549, 914
MwoI GCNNNNNNNGC 7 cut(s) 206, 544, 661, 773, 908, 923, 977
NdeII GATC 5 cut(s) 106, 323, 391, 745, 1114
NlaIII CATG 7 cut(s) 159, 194, 415, 547, 799, 1191, 1295
NlaIV GGNNCC 2 cut(s) 54, 325
NmuCI GTSAC 3 cut(s) 139, 287, 311
OliI CACNNNNGTG 1 cut(s) 294
PagI TCATGA 2 cut(s) 795, 1291
PctI GAATGC 1 cut(s) 643
PdmI GAANNNNTTC 1 cut(s) 1053
PfeI GAWTC 1 cut(s) 991
PkrI GCNGC 6 cut(s) 211, 596, 775, 901, 970, 1324
PleI GAGTC 1 cut(s) 1202
PmaCI CACGTG 1 cut(s) 944
PmlI CACGTG 1 cut(s) 944
PpsI GAGTC 1 cut(s) 1202
Ppu21I YACGTR 2 cut(s) 938, 944
PpuMI RGGWCCY 1 cut(s) 1196
Psp5II RGGWCCY 1 cut(s) 1196
Psp6I CCWGG 3 cut(s) 168, 547, 912
PspCI CACGTG 1 cut(s) 944
PspEI GGTNACC 1 cut(s) 1085
PspFI CCCAGC 1 cut(s) 530
PspGI CCWGG 3 cut(s) 168, 547, 912
PspN4I GGNNCC 2 cut(s) 54, 325
PspPI GGNCC 4 cut(s) 490, 953, 1196, 1217
PspPPI RGGWCCY 1 cut(s) 1196
PsuI RGATCY 1 cut(s) 323
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 6 cut(s) 167, 354, 556, 614, 940, 1150
RsaNI GTAC 6 cut(s) 166, 353, 555, 613, 939, 1149
RseI CAYNNNNRTG 5 cut(s) 114, 294, 1071, 1239, 1293
SaqAI TTAA 4 cut(s) 225, 357, 651, 1327
SatI GCNGC 6 cut(s) 210, 595, 774, 900, 969, 1323
Sau3AI GATC 5 cut(s) 106, 323, 391, 745, 1114
Sau96I GGNCC 4 cut(s) 490, 953, 1196, 1217
ScaI AGTACT 2 cut(s) 354, 614
SchI GAGTC 1 cut(s) 1202
ScrFI CCNGG 3 cut(s) 170, 549, 914
SduI GDGCHC 2 cut(s) 285, 913
SexAI ACCWGGT 1 cut(s) 168
SfaNI GCATC 4 cut(s) 415, 850, 1114, 1231
SfcI CTRYAG 1 cut(s) 603
SinI GGWCC 4 cut(s) 490, 953, 1196, 1217
SmiMI CAYNNNNRTG 5 cut(s) 114, 294, 1071, 1239, 1293
SmlI CTYRAG 2 cut(s) 278, 356
SmoI CTYRAG 2 cut(s) 278, 356
SpeI ACTAGT 1 cut(s) 416
Sse9I AATT 7 cut(s) 15, 46, 90, 222, 723, 855, 1020
SsiI CCGC 4 cut(s) 97, 594, 750, 1064
SspMI CTAG 7 cut(s) 78, 197, 417, 461, 527, 825, 957
StyD4I CCNGG 3 cut(s) 168, 547, 912
StyI CCWWGG 1 cut(s) 956
TaaI ACNGT 2 cut(s) 287, 296
TaiI ACGT 4 cut(s) 871, 940, 946, 952
TaqI TCGA 3 cut(s) 442, 871, 1005
TasI AATT 7 cut(s) 15, 46, 90, 222, 723, 855, 1020
TatI WGTACW 3 cut(s) 352, 612, 1148
TauI GCSGC 1 cut(s) 597
TfiI GAWTC 1 cut(s) 991
Tru1I TTAA 4 cut(s) 225, 357, 651, 1327
Tru9I TTAA 4 cut(s) 225, 357, 651, 1327
TscAI CASTG 3 cut(s) 290, 720, 1219
TseFI GTSAC 3 cut(s) 139, 287, 311
TseI GCWGC 5 cut(s) 209, 773, 899, 968, 1322
Tsp45I GTSAC 3 cut(s) 139, 287, 311
TspDTI ATGAA 3 cut(s) 296, 784, 894
TspGWI ACGGA 1 cut(s) 360
TspRI CASTG 3 cut(s) 290, 720, 1219
Vha464I CTTAAG 1 cut(s) 356
VpaK11BI GGWCC 4 cut(s) 490, 953, 1196, 1217
XcmI CCANNNNNNNNNTGG 2 cut(s) 269, 1185
XmaJI CCTAGG 1 cut(s) 956
XmnI GAANNNNTTC 1 cut(s) 1053
XspI CTAG 7 cut(s) 78, 197, 417, 461, 527, 825, 957
ZrmI AGTACT 2 cut(s) 354, 614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.