pectinesterase pectinesterase inhibitor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g19910 FvH4_7g19930 FvH4_7g19950 |
| prunus_persica | Prupe.2G216100_v2.0.a1 Prupe.2G216200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0363911 RchiOBHm_Chr1g0363921 RchiOBHm_Chr7g0226451 |
| rosa_laevigata | RLG00000027535 RLG00000027536 RLG00000027537 |
| rosa_multiflora | Rmu_sc0001695.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00004040 Rroxscaffold_4G00292840 Rroxscaffold_4G00292860 Rroxscaffold_4G00292870 |
| rosa_rugosa | Rorug01G0310900 Rorug01G0311000 Rorug01G0311100 |
| rosa_samantha | Rh1AG318900 Rh1AG319100 Rh1BG282000 Rh1BG282100 Rh1CG298500 Rh1DG313400 Rh1DG313500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 4 cut(s) | 364, 382, 400, 439 |
| AciI | CCGC | 1 cut(s) | 515 |
| AclWI | GGATC | 2 cut(s) | 137, 175 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 152 |
| AjiI | CACGTC | 1 cut(s) | 521 |
| AjnI | CCWGG | 1 cut(s) | 199 |
| AlwI | GGATC | 2 cut(s) | 137, 175 |
| AoxI | GGCC | 1 cut(s) | 33 |
| ApeKI | GCWGC | 1 cut(s) | 79 |
| AspLEI | GCGC | 3 cut(s) | 84, 248, 541 |
| AsuHPI | GGTGA | 5 cut(s) | 297, 318, 336, 411, 450 |
| AsuNHI | GCTAGC | 1 cut(s) | 535 |
| AxyI | CCTNAGG | 1 cut(s) | 570 |
| BanI | GGYRCC | 4 cut(s) | 364, 382, 400, 439 |
| BbvI | GCAGC | 1 cut(s) | 91 |
| BccI | CCATC | 1 cut(s) | 277 |
| BceAI | ACGGC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 1 cut(s) | 201 |
| BfaI | CTAG | 1 cut(s) | 536 |
| BfmI | CTRYAG | 1 cut(s) | 234 |
| BfoI | RGCGCY | 1 cut(s) | 542 |
| BglII | AGATCT | 1 cut(s) | 104 |
| BisI | GCNGC | 1 cut(s) | 80 |
| BlsI | GCNGC | 1 cut(s) | 81 |
| Bme1390I | CCNGG | 1 cut(s) | 201 |
| BmgBI | CACGTC | 1 cut(s) | 521 |
| BmiI | GGNNCC | 4 cut(s) | 366, 384, 402, 441 |
| BmrFI | CCNGG | 1 cut(s) | 201 |
| BmtI | GCTAGC | 1 cut(s) | 539 |
| BpmI | CTGGAG | 1 cut(s) | 390 |
| Bpu10I | CCTNAGC | 1 cut(s) | 294 |
| BsaBI | GATNNNNATC | 1 cut(s) | 141 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 152 |
| Bse118I | RCCGGY | 4 cut(s) | 361, 379, 397, 436 |
| Bse21I | CCTNAGG | 1 cut(s) | 570 |
| Bse3DI | GCAATG | 1 cut(s) | 563 |
| Bse8I | GATNNNNATC | 1 cut(s) | 141 |
| BseBI | CCWGG | 1 cut(s) | 201 |
| BseGI | GGATG | 4 cut(s) | 196, 481, 502, 523 |
| BseJI | GATNNNNATC | 1 cut(s) | 141 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BseMI | GCAATG | 1 cut(s) | 563 |
| BseRI | GAGGAG | 5 cut(s) | 300, 339, 378, 414, 453 |
| BseXI | GCAGC | 1 cut(s) | 91 |
| BsgI | GTGCAG | 1 cut(s) | 98 |
| BshFI | GGCC | 1 cut(s) | 35 |
| BshNI | GGYRCC | 4 cut(s) | 364, 382, 400, 439 |
| BsiSI | CCGG | 4 cut(s) | 362, 380, 398, 437 |
| BslFI | GGGAC | 2 cut(s) | 31, 200 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BsmFI | GGGAC | 2 cut(s) | 31, 200 |
| BsnI | GGCC | 1 cut(s) | 35 |
| Bsp143I | GATC | 3 cut(s) | 104, 142, 180 |
| BspACI | CCGC | 1 cut(s) | 515 |
| BspANI | GGCC | 1 cut(s) | 35 |
| BspLI | GGNNCC | 4 cut(s) | 366, 384, 402, 441 |
| BspOI | GCTAGC | 1 cut(s) | 539 |
| BspPI | GGATC | 2 cut(s) | 137, 175 |
| BspT107I | GGYRCC | 4 cut(s) | 364, 382, 400, 439 |
| BsrDI | GCAATG | 1 cut(s) | 563 |
| BsrFI | RCCGGY | 4 cut(s) | 361, 379, 397, 436 |
| BssAI | RCCGGY | 4 cut(s) | 361, 379, 397, 436 |
| BssMI | GATC | 3 cut(s) | 104, 142, 180 |
| Bst2UI | CCWGG | 1 cut(s) | 201 |
| Bst4CI | ACNGT | 6 cut(s) | 285, 303, 342, 417, 456, 561 |
| BstC8I | GCNNGC | 1 cut(s) | 537 |
| BstDEI | CTNAG | 2 cut(s) | 294, 570 |
| BstF5I | GGATG | 4 cut(s) | 196, 481, 502, 523 |
| BstH2I | RGCGCY | 1 cut(s) | 542 |
| BstHHI | GCGC | 3 cut(s) | 84, 248, 541 |
| BstKTI | GATC | 3 cut(s) | 107, 145, 183 |
| BstMBI | GATC | 3 cut(s) | 104, 142, 180 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 65, 107, 116, 210, 295 |
| BstNI | CCWGG | 1 cut(s) | 201 |
| BstSCI | CCNGG | 1 cut(s) | 199 |
| BstSFI | CTRYAG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 1 cut(s) | 91 |
| BstX2I | RGATCY | 1 cut(s) | 104 |
| BstYI | RGATCY | 1 cut(s) | 104 |
| Bsu36I | CCTNAGG | 1 cut(s) | 570 |
| BsuRI | GGCC | 1 cut(s) | 35 |
| BtrI | CACGTC | 1 cut(s) | 521 |
| BtsCI | GGATG | 4 cut(s) | 196, 481, 502, 523 |
| Cac8I | GCNNGC | 1 cut(s) | 537 |
| CfoI | GCGC | 3 cut(s) | 84, 248, 541 |
| Cfr10I | RCCGGY | 4 cut(s) | 361, 379, 397, 436 |
| CseI | GACGC | 1 cut(s) | 202 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 546, 581 |
| DdeI | CTNAG | 2 cut(s) | 294, 570 |
| DpnI | GATC | 3 cut(s) | 106, 144, 182 |
| DpnII | GATC | 3 cut(s) | 104, 142, 180 |
| EciI | GGCGGA | 1 cut(s) | 504 |
| Eco81I | CCTNAGG | 1 cut(s) | 570 |
| EcoRII | CCWGG | 1 cut(s) | 199 |
| FaiI | YATR | 3 cut(s) | 172, 179, 236 |
| FaqI | GGGAC | 2 cut(s) | 31, 200 |
| Fnu4HI | GCNGC | 1 cut(s) | 80 |
| FokI | GGATG | 4 cut(s) | 183, 468, 489, 510 |
| Fsp4HI | GCNGC | 1 cut(s) | 80 |
| FspBI | CTAG | 1 cut(s) | 536 |
| GlaI | GCGC | 3 cut(s) | 83, 247, 540 |
| GluI | GCNGC | 1 cut(s) | 80 |
| GsuI | CTGGAG | 1 cut(s) | 390 |
| HaeII | RGCGCY | 1 cut(s) | 542 |
| HaeIII | GGCC | 1 cut(s) | 35 |
| HapII | CCGG | 4 cut(s) | 362, 380, 398, 437 |
| HgaI | GACGC | 1 cut(s) | 202 |
| HhaI | GCGC | 3 cut(s) | 84, 248, 541 |
| Hin6I | GCGC | 3 cut(s) | 82, 246, 539 |
| HinP1I | GCGC | 3 cut(s) | 82, 246, 539 |
| HinfI | GANTC | 2 cut(s) | 490, 511 |
| HpaII | CCGG | 4 cut(s) | 362, 380, 398, 437 |
| HphI | GGTGA | 5 cut(s) | 297, 318, 336, 411, 450 |
| Hpy188I | TCNGA | 3 cut(s) | 147, 489, 510 |
| Hpy188III | TCNNGA | 1 cut(s) | 407 |
| Hpy99I | CGWCG | 1 cut(s) | 289 |
| HpyAV | CCTTC | 1 cut(s) | 333 |
| HpyCH4III | ACNGT | 6 cut(s) | 285, 303, 342, 417, 456, 561 |
| HpyCH4IV | ACGT | 1 cut(s) | 520 |
| HpyCH4V | TGCA | 3 cut(s) | 68, 79, 174 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 65, 107, 116, 210, 295 |
| HpyF3I | CTNAG | 2 cut(s) | 294, 570 |
| HpySE526I | ACGT | 1 cut(s) | 520 |
| HspAI | GCGC | 3 cut(s) | 82, 246, 539 |
| Kzo9I | GATC | 3 cut(s) | 104, 142, 180 |
| LmnI | GCTCC | 1 cut(s) | 64 |
| Lsp1109I | GCAGC | 1 cut(s) | 91 |
| MaeI | CTAG | 1 cut(s) | 536 |
| MaeII | ACGT | 1 cut(s) | 520 |
| MaeIII | GTNAC | 5 cut(s) | 228, 303, 342, 417, 456 |
| MalI | GATC | 3 cut(s) | 106, 144, 182 |
| MboI | GATC | 3 cut(s) | 104, 142, 180 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MflI | RGATCY | 1 cut(s) | 104 |
| MlyI | GAGTC | 2 cut(s) | 484, 505 |
| MmeI | TCCRAC | 7 cut(s) | 86, 299, 377, 416, 512, 533, 554 |
| MseI | TTAA | 1 cut(s) | 9 |
| MslI | CAYNNNNRTG | 1 cut(s) | 224 |
| MspI | CCGG | 4 cut(s) | 362, 380, 398, 437 |
| MspR9I | CCNGG | 1 cut(s) | 201 |
| MvaI | CCWGG | 1 cut(s) | 201 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 65, 107, 116, 210, 295 |
| NdeII | GATC | 3 cut(s) | 104, 142, 180 |
| NheI | GCTAGC | 1 cut(s) | 535 |
| NlaIV | GGNNCC | 4 cut(s) | 366, 384, 402, 441 |
| NmuCI | GTSAC | 4 cut(s) | 303, 342, 417, 456 |
| PkrI | GCNGC | 1 cut(s) | 81 |
| PleI | GAGTC | 2 cut(s) | 484, 505 |
| PpsI | GAGTC | 2 cut(s) | 484, 505 |
| Psp6I | CCWGG | 1 cut(s) | 199 |
| PspGI | CCWGG | 1 cut(s) | 199 |
| PspN4I | GGNNCC | 4 cut(s) | 366, 384, 402, 441 |
| PsuI | RGATCY | 1 cut(s) | 104 |
| RseI | CAYNNNNRTG | 1 cut(s) | 224 |
| SaqAI | TTAA | 1 cut(s) | 9 |
| SatI | GCNGC | 1 cut(s) | 80 |
| Sau3AI | GATC | 3 cut(s) | 104, 142, 180 |
| SchI | GAGTC | 2 cut(s) | 484, 505 |
| ScrFI | CCNGG | 1 cut(s) | 201 |
| SfcI | CTRYAG | 1 cut(s) | 234 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 224 |
| SsiI | CCGC | 1 cut(s) | 515 |
| SspMI | CTAG | 1 cut(s) | 536 |
| StyD4I | CCNGG | 1 cut(s) | 199 |
| TaaI | ACNGT | 6 cut(s) | 285, 303, 342, 417, 456, 561 |
| TaiI | ACGT | 1 cut(s) | 523 |
| Tru1I | TTAA | 1 cut(s) | 9 |
| Tru9I | TTAA | 1 cut(s) | 9 |
| TseFI | GTSAC | 4 cut(s) | 303, 342, 417, 456 |
| TseI | GCWGC | 1 cut(s) | 79 |
| Tsp45I | GTSAC | 4 cut(s) | 303, 342, 417, 456 |
| TspDTI | ATGAA | 2 cut(s) | 17, 108 |
| XspI | CTAG | 1 cut(s) | 536 |