Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006694

Physical Location & Seq

Genomic Coordinates Reverse (-)

54987397 .. 54990293

Gene Structure 2897 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030090

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGCCTGTGGATGTGATTTCACGTTCAACTTGGCAGCCTGAAAAAATGGCACTGGCAATCCCACCAAATCATCGTCCTCCTCCTCCTCCTCATCAACATCTCCCTATTACATTTAACACCAGTAATGGAGACTCTCTCTCACCCAACCACCACAACCGTCTTCTCCACTTGTTGAATGAATGTACGTCCATGTCTCAGCTGAAACCAATACACGCTCACACACTGCGCACCGCATCCACCACAAACCCGCACACCCTCTTTCTCCACAGCCGAATCCTCCACTTCTCATCCTTAACCGATATCCGCTACGCCTTTCGGGTTTTCAATCAGATCGAGAGTCCCAACTCTTTCACCTGGAACACCCTCATCAGGGGTTGTGCTCGAAGCTCTGGGCTCGAAAACCAGGCTATACTACTCTACTGTGAAATGTTATCACAAGGAGTTGCTCTGCCGGATGAGTATACCTTCCCCTTTGTTCTCAGAGCTTGTGCTTACTTGTTTGCCTTATCGGAAGGAAAACAAGCGCATGCTCATGTTGTCAAGCTTGGGTTTGGTTCAGACGTTTATATCGGCAATAGTCTGATTCATCTGTATGCTTCTTGTGGGTGTTTGGATTACGCACAGAAGGTGTTTGGGAAAATGCGTCAGAGAAGCGTTGTGTCGTGGAATGTTATGATTGATTCTTTGGTTGGGGCTGGCGAGTTTGAGAATTCGCTGAAAGTGTTTGGTCAGATGCAGAGGCTGTTTGAGCCTGATGGGTATACAATGCAGAGTGTTATAAATGCTTGTGCTGGTTTGGGGGCTTTGGATTTGGGAATGTGGGCTCATGCTTATGTGTTGAGGAAGTGTGATAATGCTGTAGCCACCAACGTGTTGGTGAACTCTTCGTTGGTTGATATGTATTGCAAATGTGGGTCCTTGGATATGGCTGTCCAATTGTTCGAGGGAATGCCGAAACGTGATGTGATTACATGGAATTATATGATTCTGGGATTTGCCATGCATGGAAAAGCTGAGGCAGCTTTAAAGTGTTTTGATCGTATGGTTAATATGGAGAGTTGTAGGCCAAATTCAATCACATTCGTTGGTGTTTTGAGTGCATGCAGTCACAGAGGCATGGTTAACGAAGGTCGTAAGTTCTTTGATAAGATGGTAAAAGAGTACAAGATTGAACCACGGTTAGAGCATTACGGGTGCCTAGTTGATCTTCTTGCGCGTGCTGGTTTCATCGACGAAGCTTTGAATTTGGGGACAACAATGCCTGTGAAGCCTGATGCTGTAATATGGAGGAGTCTTCTTGATGCTTGCAGTAAGCAACAGCATGCCAGTATTGAGCTAAGTGAAGAAGTGGCCAGGCAGATCCTTGAGTATGGAGGAGAGGATGTTTCTAGTGGTGTTTATGTGCTATTGTCAAGAGTCTATGCTTCAGCTAGCCGCTGGAACGACGTTGGATCAATTCGGAGATTGATGACAGAGGAGGGTATAGCAAAAGAGCCTGGCTGTAGTATAATAGACATAGATGGTATTACGCATGAATTTTTTGCTGGGGACACATCTCATCCTCATAGTAGAGAAATATATCAGGTCTTGGATGCGATGAAGGAAAGACTCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

539

Amino Acids

60.11

Weight (kDa)

6.62

Isoelectric Point (pI)

48.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	114 - 164	2.3e-08	PPR repeat family
PPR_2	PF13041	218 - 264	5e-08	PPR repeat family
PPR_2	PF13041	320 - 369	1.4e-09	PPR repeat family
E_motif	PF20431	441 - 504	3.5e-15	E motif
Eplus_motif	PF20430	510 - 531	1.7e-10	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006694)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59720
fragaria_vesca	FvH4_7g03570
malus_domestica	MD13G1081600.v1.1
prunus_persica	Prupe.1G265300_v2.0.a1
pyrus_communis	pycom13g07040
rosa_chinensis	RchiOBHm_Chr1g0325991 RchiOBHm_Chr1g0326081 RchiOBHm_Chr1g0326151
rosa_laevigata	RLG00000030090
rosa_multiflora	Rmu_sc0000028.1_g000011 Rmu_sc0003356.1_g000004 Rmu_sc0011910.1_g000008
rosa_roxburghii	Rroxscaffold_4G00324040
rosa_rugosa	Rorug01G0056800 Rorug01G0056900 Rorug01G0057000 Rorug01G0057100 Rorug01G0057200 Rorug01G0057300
rosa_samantha	Rh1AG073400 Rh1AG074200 Rh1BG059700 Rh1CG073000
rosa_wichuraiana	Rw0G003160 Rw0G020760 Rw1G005950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	779
Acc16I	TGCGCA	1 cut(s)	227
AccB1I	GGYRCC	1 cut(s)	1194
AccI	GTMKAC	2 cut(s)	461, 761
AccII	CGCG	1 cut(s)	1216
AciI	CCGC	4 cut(s)	231, 248, 304, 1435
AclWI	GGATC	2 cut(s)	1354, 1459
AcoI	YGGCCR	1 cut(s)	1350
AcsI	RAATTY	4 cut(s)	709, 1069, 1243, 1535
AcuI	CTGAAG	1 cut(s)	1410
AfaI	GTAC	2 cut(s)	184, 1163
AfiI	CCNNNNNNNGG	2 cut(s)	369, 370
AflIII	ACRYGT	1 cut(s)	870
AgsI	TTSAA	6 cut(s)	27, 175, 325, 1074, 1172, 1243
AjnI	CCWGG	4 cut(s)	353, 402, 1352, 1495
AjuI	GAANNNNNNNTTGG	2 cut(s)	872, 904
AleI	CACNNNNGTG	1 cut(s)	869
AluBI	AGCT	9 cut(s)	199, 387, 485, 544, 1013, 1022, 1238, 1336, 1430
AluI	AGCT	9 cut(s)	199, 387, 485, 544, 1013, 1022, 1238, 1336, 1430
Alw21I	GWGCWC	1 cut(s)	382
Alw26I	GTCTC	2 cut(s)	123, 198
AlwI	GGATC	2 cut(s)	1354, 1459
AlwNI	CAGNNNCTG	1 cut(s)	742
AoxI	GGCC	2 cut(s)	1064, 1350
ApeKI	GCWGC	2 cut(s)	34, 1019
ApoI	RAATTY	4 cut(s)	709, 1069, 1243, 1535
AspLEI	GCGC	3 cut(s)	228, 526, 1216
AspS9I	GGNCC	1 cut(s)	915
AsuHPI	GGTGA	3 cut(s)	132, 343, 889
AsuNHI	GCTAGC	1 cut(s)	1430
AvaII	GGWCC	1 cut(s)	915
BalI	TGGCCA	1 cut(s)	1352
BanI	GGYRCC	1 cut(s)	1194
BanII	GRGCYC	2 cut(s)	396, 826
BbsI	GAAGAC	2 cut(s)	152, 1286
Bbv12I	GWGCWC	1 cut(s)	382
BbvCI	CCTCAGC	1 cut(s)	1014
BbvI	GCAGC	2 cut(s)	46, 1031
BccI	CCATC	3 cut(s)	749, 1144, 1514
BciT130I	CCWGG	4 cut(s)	355, 404, 1354, 1497
BcoDI	GTCTC	2 cut(s)	123, 198
BfaI	CTAG	3 cut(s)	1199, 1389, 1431
BfmI	CTRYAG	2 cut(s)	858, 1501
BisI	GCNGC	3 cut(s)	35, 1020, 1435
BlsI	GCNGC	3 cut(s)	36, 1021, 1436
Bme1390I	CCNGG	4 cut(s)	355, 404, 1354, 1497
Bme18I	GGWCC	1 cut(s)	915
BmgT120I	GGNCC	1 cut(s)	915
BmiI	GGNNCC	2 cut(s)	916, 1196
BmrFI	CCNGG	4 cut(s)	355, 404, 1354, 1497
BmsI	GCATC	5 cut(s)	242, 723, 1264, 1291, 1582
BmtI	GCTAGC	1 cut(s)	1434
BpiI	GAAGAC	2 cut(s)	152, 1286
BplI	GAGNNNNNCTC	2 cut(s)	120, 152
Bpu10I	CCTNAGC	1 cut(s)	1014
BpuEI	CTTGAG	1 cut(s)	1385
BsaJI	CCNNGG	2 cut(s)	918, 1175
BsaXI	ACNNNNNCTCC	2 cut(s)	1368, 1398
Bsc4I	CCNNNNNNNGG	2 cut(s)	369, 370
Bse1I	ACTGG	3 cut(s)	57, 120, 1326
BseBI	CCWGG	4 cut(s)	355, 404, 1354, 1497
BseDI	CCNNGG	2 cut(s)	918, 1175
BseGI	GGATG	7 cut(s)	16, 233, 287, 460, 1387, 1558, 1597
BseLI	CCNNNNNNNGG	2 cut(s)	369, 370
BseMII	CTCAG	3 cut(s)	209, 493, 1005
BseNI	ACTGG	3 cut(s)	57, 120, 1326
BseRI	GAGGAG	7 cut(s)	69, 72, 75, 78, 1303, 1389, 1490
BseXI	GCAGC	2 cut(s)	46, 1031
BseYI	CCCAGC	1 cut(s)	1544
Bsh1236I	CGCG	1 cut(s)	1216
BshFI	GGCC	2 cut(s)	1066, 1352
BshNI	GGYRCC	1 cut(s)	1194
BsiHKAI	GWGCWC	1 cut(s)	382
BsiSI	CCGG	1 cut(s)	452
BslFI	GGGAC	3 cut(s)	324, 1264, 1562
BslI	CCNNNNNNNGG	2 cut(s)	369, 370
BsmAI	GTCTC	2 cut(s)	123, 198
BsmFI	GGGAC	3 cut(s)	324, 1264, 1562
BsmI	GAATGC	1 cut(s)	954
BsnI	GGCC	2 cut(s)	1066, 1352
Bsp1286I	GDGCHC	3 cut(s)	382, 396, 826
Bsp143I	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
BspACI	CCGC	4 cut(s)	231, 248, 304, 1435
BspANI	GGCC	2 cut(s)	1066, 1352
BspCNI	CTCAG	3 cut(s)	208, 492, 1006
BspFNI	CGCG	1 cut(s)	1216
BspLI	GGNNCC	2 cut(s)	916, 1196
BspOI	GCTAGC	1 cut(s)	1434
BspPI	GGATC	2 cut(s)	1354, 1459
BspT107I	GGYRCC	1 cut(s)	1194
BsrI	ACTGG	3 cut(s)	57, 120, 1326
BssECI	CCNNGG	2 cut(s)	918, 1175
BssMI	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
BssNAI	GTATAC	2 cut(s)	462, 762
BssT1I	CCWWGG	1 cut(s)	918
Bst1107I	GTATAC	2 cut(s)	462, 762
Bst2UI	CCWGG	4 cut(s)	355, 404, 1354, 1497
Bst4CI	ACNGT	3 cut(s)	158, 422, 1179
Bst6I	CTCTTC	1 cut(s)	889
BstC8I	GCNNGC	7 cut(s)	528, 697, 1102, 1218, 1306, 1323, 1432
BstDEI	CTNAG	4 cut(s)	195, 479, 1014, 1337
BstDSI	CCRYGG	1 cut(s)	1175
BstF5I	GGATG	7 cut(s)	16, 233, 287, 460, 1387, 1558, 1597
BstFNI	CGCG	1 cut(s)	1216
BstHHI	GCGC	3 cut(s)	228, 526, 1216
BstKTI	GATC	5 cut(s)	333, 1039, 1207, 1362, 1454
BstMAI	GTCTC	2 cut(s)	123, 198
BstMBI	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
BstMWI	GCNNNNNNNGC	3 cut(s)	748, 1019, 1267
BstNI	CCWGG	4 cut(s)	355, 404, 1354, 1497
BstNSI	RCATGY	3 cut(s)	530, 1104, 1325
BstSCI	CCNGG	4 cut(s)	353, 402, 1352, 1495
BstSFI	CTRYAG	2 cut(s)	858, 1501
BstUI	CGCG	1 cut(s)	1216
BstV1I	GCAGC	2 cut(s)	46, 1031
BstV2I	GAAGAC	2 cut(s)	152, 1286
BstX2I	RGATCY	1 cut(s)	1359
BstXI	CCANNNNNNTGG	1 cut(s)	874
BstYI	RGATCY	1 cut(s)	1359
BstZ17I	GTATAC	2 cut(s)	462, 762
BsuRI	GGCC	2 cut(s)	1066, 1352
BtgI	CCRYGG	1 cut(s)	1175
BtgZI	GCGATG	1 cut(s)	1610
BtsCI	GGATG	7 cut(s)	16, 233, 287, 460, 1387, 1558, 1597
BtsI	GCAGTG	1 cut(s)	221
BtsIMutI	CAGTG	2 cut(s)	50, 221
Cac8I	GCNNGC	7 cut(s)	528, 697, 1102, 1218, 1306, 1323, 1432
CaiI	CAGNNNCTG	1 cut(s)	742
CfoI	GCGC	3 cut(s)	228, 526, 1216
Cfr13I	GGNCC	1 cut(s)	915
CseI	GACGC	1 cut(s)	632
Csp6I	GTAC	2 cut(s)	183, 1162
CviQI	GTAC	2 cut(s)	183, 1162
DdeI	CTNAG	4 cut(s)	195, 479, 1014, 1337
DpnI	GATC	5 cut(s)	332, 1038, 1206, 1361, 1453
DpnII	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
DraI	TTTAAA	1 cut(s)	1026
EaeI	YGGCCR	1 cut(s)	1350
Eam1104I	CTCTTC	1 cut(s)	889
EarI	CTCTTC	1 cut(s)	889
Eco130I	CCWWGG	1 cut(s)	918
Eco24I	GRGCYC	2 cut(s)	396, 826
Eco32I	GATATC	1 cut(s)	301
Eco47I	GGWCC	1 cut(s)	915
Eco57I	CTGAAG	1 cut(s)	1410
EcoO109I	RGGNCCY	1 cut(s)	915
EcoRI	GAATTC	1 cut(s)	709
EcoRII	CCWGG	4 cut(s)	353, 402, 1352, 1495
EcoRV	GATATC	1 cut(s)	301
EcoT14I	CCWWGG	1 cut(s)	918
EcoT22I	ATGCAT	1 cut(s)	1005
EcoT38I	GRGCYC	2 cut(s)	396, 826
ErhI	CCWWGG	1 cut(s)	918
FaqI	GGGAC	3 cut(s)	324, 1264, 1562
FauI	CCCGC	1 cut(s)	255
FblI	GTMKAC	2 cut(s)	461, 761
Fnu4HI	GCNGC	3 cut(s)	35, 1020, 1435
FokI	GGATG	7 cut(s)	23, 220, 274, 467, 1394, 1545, 1604
FriOI	GRGCYC	2 cut(s)	396, 826
Fsp4HI	GCNGC	3 cut(s)	35, 1020, 1435
FspBI	CTAG	3 cut(s)	1199, 1389, 1431
FspI	TGCGCA	1 cut(s)	227
GlaI	GCGC	3 cut(s)	227, 525, 1215
GluI	GCNGC	3 cut(s)	35, 1020, 1435
GsaI	CCCAGC	1 cut(s)	1548
HaeIII	GGCC	2 cut(s)	1066, 1352
HapII	CCGG	1 cut(s)	452
HgaI	GACGC	1 cut(s)	632
HhaI	GCGC	3 cut(s)	228, 526, 1216
Hin6I	GCGC	3 cut(s)	226, 524, 1214
HinP1I	GCGC	3 cut(s)	226, 524, 1214
HincII	GTYRAC	1 cut(s)	1123
HindII	GTYRAC	1 cut(s)	1123
HindIII	AAGCTT	2 cut(s)	542, 1236
HinfI	GANTC	9 cut(s)	131, 273, 337, 583, 680, 985, 1291, 1416, 1608
HpaI	GTTAAC	1 cut(s)	1123
HpaII	CCGG	1 cut(s)	452
HphI	GGTGA	3 cut(s)	132, 343, 889
Hpy166II	GTNNAC	4 cut(s)	462, 762, 880, 1123
Hpy188I	TCNGA	8 cut(s)	330, 482, 511, 559, 582, 648, 732, 1461
Hpy188III	TCNNGA	3 cut(s)	334, 1298, 1413
Hpy8I	GTNNAC	4 cut(s)	462, 762, 880, 1123
Hpy99I	CGWCG	2 cut(s)	1235, 1448
HpyAV	CCTTC	5 cut(s)	475, 506, 619, 1121, 1594
HpyCH4III	ACNGT	3 cut(s)	158, 422, 1179
HpyCH4IV	ACGT	6 cut(s)	22, 185, 561, 870, 958, 1446
HpyCH4V	TGCA	7 cut(s)	736, 769, 906, 1003, 1100, 1104, 1308
HpyF10VI	GCNNNNNNNGC	3 cut(s)	748, 1019, 1267
HpyF3I	CTNAG	4 cut(s)	195, 479, 1014, 1337
HpySE526I	ACGT	6 cut(s)	22, 185, 561, 870, 958, 1446
HspAI	GCGC	3 cut(s)	226, 524, 1214
KspAI	GTTAAC	1 cut(s)	1123
Kzo9I	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
Lsp1109I	GCAGC	2 cut(s)	46, 1031
LweI	GCATC	5 cut(s)	242, 723, 1264, 1291, 1582
MaeI	CTAG	3 cut(s)	1199, 1389, 1431
MaeII	ACGT	6 cut(s)	22, 185, 561, 870, 958, 1446
MaeIII	GTNAC	1 cut(s)	1106
MalI	GATC	5 cut(s)	332, 1038, 1206, 1361, 1453
MboI	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
MboII	GAAGA	5 cut(s)	152, 876, 1199, 1286, 1355
MfeI	CAATTG	1 cut(s)	935
MflI	RGATCY	1 cut(s)	1359
MhlI	GDGCHC	3 cut(s)	382, 396, 826
MlsI	TGGCCA	1 cut(s)	1352
MluCI	AATT	7 cut(s)	709, 935, 976, 1069, 1243, 1455, 1535
MluNI	TGGCCA	1 cut(s)	1352
MlyI	GAGTC	5 cut(s)	125, 346, 1300, 1425, 1602
MmeI	TCCRAC	1 cut(s)	1429
Mox20I	TGGCCA	1 cut(s)	1352
Mph1103I	ATGCAT	1 cut(s)	1005
MscI	TGGCCA	1 cut(s)	1352
MseI	TTAA	5 cut(s)	114, 293, 1025, 1047, 1122
MslI	CAYNNNNRTG	4 cut(s)	531, 591, 831, 869
Msp20I	TGGCCA	1 cut(s)	1352
MspA1I	CMGCKG	2 cut(s)	199, 1437
MspI	CCGG	1 cut(s)	452
MspR9I	CCNGG	4 cut(s)	355, 404, 1354, 1497
MunI	CAATTG	1 cut(s)	935
Mva1269I	GAATGC	1 cut(s)	954
MvaI	CCWGG	4 cut(s)	355, 404, 1354, 1497
MvnI	CGCG	1 cut(s)	1216
MwoI	GCNNNNNNNGC	3 cut(s)	748, 1019, 1267
NdeII	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
NheI	GCTAGC	1 cut(s)	1430
NlaIV	GGNNCC	2 cut(s)	916, 1196
NmuCI	GTSAC	1 cut(s)	1106
NsbI	TGCGCA	1 cut(s)	227
NsiI	ATGCAT	1 cut(s)	1005
NspI	RCATGY	3 cut(s)	530, 1104, 1325
OliI	CACNNNNGTG	1 cut(s)	869
PaeI	GCATGC	3 cut(s)	530, 1104, 1325
PctI	GAATGC	1 cut(s)	954
PfeI	GAWTC	4 cut(s)	273, 583, 680, 985
PkrI	GCNGC	3 cut(s)	36, 1021, 1436
PleI	GAGTC	5 cut(s)	125, 345, 1299, 1424, 1602
PpsI	GAGTC	5 cut(s)	125, 345, 1299, 1424, 1602
PpuMI	RGGWCCY	1 cut(s)	915
PsiI	TTATAA	1 cut(s)	779
Psp5II	RGGWCCY	1 cut(s)	915
Psp6I	CCWGG	4 cut(s)	353, 402, 1352, 1495
PspFI	CCCAGC	1 cut(s)	1544
PspGI	CCWGG	4 cut(s)	353, 402, 1352, 1495
PspN4I	GGNNCC	2 cut(s)	916, 1196
PspPI	GGNCC	1 cut(s)	915
PspPPI	RGGWCCY	1 cut(s)	915
PstNI	CAGNNNCTG	1 cut(s)	742
PsuI	RGATCY	1 cut(s)	1359
PvuII	CAGCTG	1 cut(s)	199
RsaI	GTAC	2 cut(s)	184, 1163
RsaNI	GTAC	2 cut(s)	183, 1162
RseI	CAYNNNNRTG	4 cut(s)	531, 591, 831, 869
SaqAI	TTAA	5 cut(s)	114, 293, 1025, 1047, 1122
SatI	GCNGC	3 cut(s)	35, 1020, 1435
Sau3AI	GATC	5 cut(s)	330, 1036, 1204, 1359, 1451
Sau96I	GGNCC	1 cut(s)	915
SchI	GAGTC	5 cut(s)	125, 346, 1300, 1425, 1602
ScrFI	CCNGG	4 cut(s)	355, 404, 1354, 1497
SduI	GDGCHC	3 cut(s)	382, 396, 826
SfaNI	GCATC	5 cut(s)	242, 723, 1264, 1291, 1582
SfcI	CTRYAG	2 cut(s)	858, 1501
SinI	GGWCC	1 cut(s)	915
SmiMI	CAYNNNNRTG	4 cut(s)	531, 591, 831, 869
SmlI	CTYRAG	1 cut(s)	1364
SmoI	CTYRAG	1 cut(s)	1364
SphI	GCATGC	3 cut(s)	530, 1104, 1325
Sse9I	AATT	7 cut(s)	709, 935, 976, 1069, 1243, 1455, 1535
SsiI	CCGC	4 cut(s)	231, 248, 304, 1435
SspMI	CTAG	3 cut(s)	1199, 1389, 1431
StyD4I	CCNGG	4 cut(s)	353, 402, 1352, 1495
StyI	CCWWGG	1 cut(s)	918
TaaI	ACNGT	3 cut(s)	158, 422, 1179
TaiI	ACGT	6 cut(s)	25, 188, 564, 873, 961, 1449
TaqI	TCGA	5 cut(s)	333, 382, 396, 942, 1230
TasI	AATT	7 cut(s)	709, 935, 976, 1069, 1243, 1455, 1535
TatI	WGTACW	1 cut(s)	1161
TauI	GCSGC	1 cut(s)	1437
TfiI	GAWTC	4 cut(s)	273, 583, 680, 985
Tru1I	TTAA	5 cut(s)	114, 293, 1025, 1047, 1122
Tru9I	TTAA	5 cut(s)	114, 293, 1025, 1047, 1122
TscAI	CASTG	2 cut(s)	57, 228
TseFI	GTSAC	1 cut(s)	1106
TseI	GCWGC	2 cut(s)	34, 1019
Tsp45I	GTSAC	1 cut(s)	1106
TspDTI	ATGAA	5 cut(s)	192, 575, 1216, 1548, 1613
TspRI	CASTG	2 cut(s)	57, 228
VpaK11BI	GGWCC	1 cut(s)	915
XapI	RAATTY	4 cut(s)	709, 1069, 1243, 1535
XceI	RCATGY	3 cut(s)	530, 1104, 1325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	871
XmiI	GTMKAC	2 cut(s)	461, 761
XspI	CTAG	3 cut(s)	1199, 1389, 1431
Zsp2I	ATGCAT	1 cut(s)	1005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.