RLG00000030926

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
720683 .. 722165
1483 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030926

Sequence Viewer

Length: 1224 bp
ATGAAATCTGCAGAAGGAAAATCCTCCACAGACGCCCAGCACCGCCAAATCCAAGCCATCCTGGCCGAGCTCCCGCCGGAGGTAATCATCAACATCCTCTCACGCCTCCACGTCGGCCGCCTCCTCTGTTTCAGGTCCGTCGCCAAACCATGGCGGTCCCTAATCGACAGCTCCTACTTCAAAAACCTCCACCTCCTCCATTCCACTGAGACCAAATCCAATCTCACTCTTATCCTCCGTAAGGACTCCGACCTCTATTGCGTCGATTTCGACTCGCTAAACGACGCAGTCGAGCTCACTCACCCACTCATGTGTTACAGCAACCGAATTAGGGTTCTGGGGTCCTGCAACGGGCTGCTGTGCATCTGCAACGTGGCGGAGGACATCGCGTTGTGGAGCCCTTGGATTAGAAAGTACAGGATTCTGCCGTCTTTGCCGTCGGATCGAAAGAGGGACAAAGGTATGTGCTTGTGTGGTGCTAGGGTTTACGGGCTGGGATACGACGCCGTTCATGACGACTATAAATTGGTCAGGATTTCGCAGTTTATTGGATGGGACTATGCGTCGTTTGAGAGTGAGGTGAAAGTTTATAGTCTGAGAATGAATGCGTGGAGAAAGGTGGATGACATGCCATATGTGCTGTGTTACACACGAAAAATGGGGATTCTTGTGAGTGGATCTGTGCATTGGGTGGTGACGCGGAGTCATGAAGTGGATCAACCGGCAACCGAGTTGGTTATTGGATTTGATGTAGAGAAGGAGAGATTTGGGGAGGTGCCGATGCCGGAGATGGACCGGAAGTGTCAGATTGATGTGGGGTATCTGGAAGGGTGTCTTTGCATTATAGCCAAGTATGAAGATGTGGGTGTTGATGTTTGGACTATCAAACAGTATGGGGTTAAGGAGACTTGGTGTAAATTGTTTTCTGTGAAACAGGCTCAAGGGGTTAGAAGGCCTAAGAGTATTAGGCCTCTGGTTTATTCAAAGAATCGCCGTCAAGTTTTGATGGAACAAAACCATGAAGATCTTGTTTGGTTTGACTTGGACAGTCAGATGGTCAATAAAATTAAGATTCGCGGTTTGCCAGATTTATTTGAGGCTATAGTCTGTGCGGAAACCCTTGTTCCGGTTGATCCTAGTAAACGAGAAGACAAGGAAAAAGAGGGAAAAAAGAATAAGAAGAGGGATGATTTCCTAGCAGAAGGCTTCAAATTGGTGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

408

Amino Acids

46.88

Weight (kDa)

8.41

Isoelectric Point (pI)

37.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 22 - 59 9.6e-06 F-box-like
F-box PF00646 23 - 61 2.1e-07 F-box domain
FBA_1 PF07734 78 - 359 1.7e-26 F-box associated beta propeller domain
FBA_3 PF08268 105 - 363 1.2e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 775
AccB7I CCANNNNNTGG 1 cut(s) 150
AccII CGCG 3 cut(s) 389, 700, 1077
AciI CCGC 8 cut(s) 43, 74, 118, 154, 377, 700, 1077, 1112
AclWI GGATC 4 cut(s) 450, 685, 723, 1127
AcoI YGGCCR 2 cut(s) 63, 115
AcyI GRCGYC 2 cut(s) 33, 504
AfaI GTAC 1 cut(s) 416
AfiI CCNNNNNNNGG 6 cut(s) 79, 150, 241, 331, 351, 1126
AgsI TTSAA 3 cut(s) 181, 984, 1210
AhdI GACNNNNNGTC 2 cut(s) 562, 702
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 1 cut(s) 60
AleI CACNNNNGTG 1 cut(s) 310
AluBI AGCT 3 cut(s) 70, 171, 295
AluI AGCT 3 cut(s) 70, 171, 295
Alw21I GWGCWC 2 cut(s) 72, 297
Alw26I GTCTC 2 cut(s) 203, 899
AlwI GGATC 4 cut(s) 450, 685, 723, 1127
AoxI GGCC 4 cut(s) 63, 115, 953, 968
ApeKI GCWGC 1 cut(s) 355
AspS9I GGNCC 4 cut(s) 135, 156, 342, 793
AsuHPI GGTGA 3 cut(s) 293, 592, 706
AvaII GGWCC 4 cut(s) 135, 156, 342, 793
BanI GGYRCC 1 cut(s) 775
BanII GRGCYC 3 cut(s) 72, 297, 401
BbsI GAAGAC 1 cut(s) 1155
Bbv12I GWGCWC 2 cut(s) 72, 297
BbvI GCAGC 1 cut(s) 342
BccI CCATC 5 cut(s) 65, 546, 784, 1000, 1048
BceAI ACGGC 4 cut(s) 412, 421, 491, 978
BciT130I CCWGG 1 cut(s) 62
BciVI GTATCC 1 cut(s) 491
BcoDI GTCTC 2 cut(s) 203, 899
BfaI CTAG 3 cut(s) 480, 1137, 1196
BfmI CTRYAG 2 cut(s) 9, 1101
BfuI GTATCC 1 cut(s) 491
BglI GCCNNNNNGGC 1 cut(s) 62
BglII AGATCT 1 cut(s) 1024
BisI GCNGC 2 cut(s) 118, 356
BlsI GCNGC 2 cut(s) 119, 357
Bme1390I CCNGG 1 cut(s) 62
Bme18I GGWCC 4 cut(s) 135, 156, 342, 793
BmeRI GACNNNNNGTC 2 cut(s) 562, 702
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 4 cut(s) 135, 156, 342, 793
BmiI GGNNCC 4 cut(s) 158, 343, 398, 777
BmrFI CCNGG 1 cut(s) 62
BmsI GCATC 2 cut(s) 372, 771
BpiI GAAGAC 1 cut(s) 1155
BpuEI CTTGAG 1 cut(s) 924
BsaHI GRCGYC 2 cut(s) 33, 504
BsaI GGTCTC 1 cut(s) 203
BsaJI CCNNGG 2 cut(s) 149, 401
BsaWI WCCGGW 2 cut(s) 795, 1126
BsaXI ACNNNNNCTCC 2 cut(s) 896, 926
Bsc4I CCNNNNNNNGG 6 cut(s) 79, 150, 241, 331, 351, 1126
Bse118I RCCGGY 1 cut(s) 721
BseBI CCWGG 1 cut(s) 62
BseDI CCNNGG 2 cut(s) 149, 401
BseGI GGATG 5 cut(s) 57, 93, 557, 628, 1192
BseLI CCNNNNNNNGG 6 cut(s) 79, 150, 241, 331, 351, 1126
BseMII CTCAG 2 cut(s) 198, 587
BseRI GAGGAG 2 cut(s) 113, 185
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 1 cut(s) 342
BseYI CCCAGC 2 cut(s) 36, 493
Bsh1236I CGCG 3 cut(s) 389, 700, 1077
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 4 cut(s) 65, 117, 955, 970
BshNI GGYRCC 1 cut(s) 775
BsiEI CGRYCG 1 cut(s) 118
BsiHKAI GWGCWC 2 cut(s) 72, 297
BsiSI CCGG 5 cut(s) 77, 722, 785, 796, 1127
BslFI GGGAC 3 cut(s) 142, 467, 569
BslI CCNNNNNNNGG 6 cut(s) 79, 150, 241, 331, 351, 1126
BsmAI GTCTC 2 cut(s) 203, 899
BsmFI GGGAC 3 cut(s) 142, 467, 569
BsmI GAATGC 1 cut(s) 610
BsnI GGCC 4 cut(s) 65, 117, 955, 970
Bso31I GGTCTC 1 cut(s) 203
Bsp1286I GDGCHC 3 cut(s) 72, 297, 401
Bsp143I GATC 5 cut(s) 442, 677, 715, 1024, 1132
Bsp19I CCATGG 1 cut(s) 149
BspACI CCGC 8 cut(s) 43, 74, 118, 154, 377, 700, 1077, 1112
BspANI GGCC 4 cut(s) 65, 117, 955, 970
BspCNI CTCAG 2 cut(s) 199, 588
BspFNI CGCG 3 cut(s) 389, 700, 1077
BspHI TCATGA 2 cut(s) 511, 706
BspLI GGNNCC 4 cut(s) 158, 343, 398, 777
BspMAI CTGCAG 1 cut(s) 13
BspPI GGATC 4 cut(s) 450, 685, 723, 1127
BspT107I GGYRCC 1 cut(s) 775
BspTNI GGTCTC 1 cut(s) 203
BsrFI RCCGGY 1 cut(s) 721
BssAI RCCGGY 1 cut(s) 721
BssECI CCNNGG 2 cut(s) 149, 401
BssMI GATC 5 cut(s) 442, 677, 715, 1024, 1132
BssNI GRCGYC 2 cut(s) 33, 504
BssT1I CCWWGG 2 cut(s) 149, 401
Bst2UI CCWGG 1 cut(s) 62
Bst4CI ACNGT 2 cut(s) 891, 1049
Bst6I CTCTTC 1 cut(s) 1175
BstACI GRCGYC 2 cut(s) 33, 504
BstDEI CTNAG 3 cut(s) 207, 596, 957
BstDSI CCRYGG 1 cut(s) 149
BstENI CCTNNNNNAGG 1 cut(s) 239
BstF5I GGATG 5 cut(s) 57, 93, 557, 628, 1192
BstFNI CGCG 3 cut(s) 389, 700, 1077
BstKTI GATC 5 cut(s) 445, 680, 718, 1027, 1135
BstMAI GTCTC 2 cut(s) 203, 899
BstMBI GATC 5 cut(s) 442, 677, 715, 1024, 1132
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 3 cut(s) 62, 433, 637
BstNI CCWGG 1 cut(s) 62
BstNSI RCATGY 1 cut(s) 631
BstSCI CCNGG 1 cut(s) 60
BstSFI CTRYAG 2 cut(s) 9, 1101
BstUI CGCG 3 cut(s) 389, 700, 1077
BstV1I GCAGC 1 cut(s) 342
BstV2I GAAGAC 1 cut(s) 1155
BstX2I RGATCY 2 cut(s) 677, 1024
BstYI RGATCY 2 cut(s) 677, 1024
BstZI CGGCCG 1 cut(s) 115
BsuI GTATCC 1 cut(s) 491
BsuRI GGCC 4 cut(s) 65, 117, 955, 970
BtgI CCRYGG 1 cut(s) 149
BtgZI GCGATG 1 cut(s) 370
BtrI CACGTC 1 cut(s) 112
BtsCI GGATG 5 cut(s) 57, 93, 557, 628, 1192
BtsIMutI CAGTG 1 cut(s) 204
CciI TCATGA 2 cut(s) 511, 706
Cfr10I RCCGGY 1 cut(s) 721
Cfr13I GGNCC 4 cut(s) 135, 156, 342, 793
CseI GACGC 6 cut(s) 41, 250, 293, 512, 552, 706
Csp6I GTAC 1 cut(s) 415
CviAII CATG 6 cut(s) 150, 310, 512, 628, 707, 1019
CviQI GTAC 1 cut(s) 415
DdeI CTNAG 3 cut(s) 207, 596, 957
DpnI GATC 5 cut(s) 444, 679, 717, 1026, 1134
DpnII GATC 5 cut(s) 442, 677, 715, 1024, 1132
DriI GACNNNNNGTC 2 cut(s) 562, 702
EaeI YGGCCR 2 cut(s) 63, 115
EagI CGGCCG 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 1175
Eam1105I GACNNNNNGTC 2 cut(s) 562, 702
EarI CTCTTC 1 cut(s) 1175
EciI GGCGGA 1 cut(s) 392
Ecl136II GAGCTC 2 cut(s) 70, 295
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 2 cut(s) 149, 401
Eco147I AGGCCT 2 cut(s) 955, 970
Eco24I GRGCYC 3 cut(s) 72, 297, 401
Eco31I GGTCTC 1 cut(s) 203
Eco47I GGWCC 4 cut(s) 135, 156, 342, 793
Eco52I CGGCCG 1 cut(s) 115
Eco53kI GAGCTC 2 cut(s) 70, 295
EcoICRI GAGCTC 2 cut(s) 70, 295
EcoNI CCTNNNNNAGG 1 cut(s) 239
EcoO109I RGGNCCY 1 cut(s) 342
EcoRII CCWGG 1 cut(s) 60
EcoT14I CCWWGG 2 cut(s) 149, 401
EcoT38I GRGCYC 3 cut(s) 72, 297, 401
ErhI CCWWGG 2 cut(s) 149, 401
FaeI CATG 6 cut(s) 153, 313, 515, 631, 710, 1022
FalI AAGNNNNNCTT 2 cut(s) 819, 851
FaqI GGGAC 3 cut(s) 142, 467, 569
FatI CATG 6 cut(s) 149, 309, 511, 627, 706, 1018
FauI CCCGC 1 cut(s) 81
FauNDI CATATG 1 cut(s) 634
Fnu4HI GCNGC 2 cut(s) 118, 356
FokI GGATG 5 cut(s) 44, 80, 564, 635, 1199
FriOI GRGCYC 3 cut(s) 72, 297, 401
Fsp4HI GCNGC 2 cut(s) 118, 356
FspBI CTAG 3 cut(s) 480, 1137, 1196
GluI GCNGC 2 cut(s) 118, 356
GsaI CCCAGC 2 cut(s) 40, 497
HaeIII GGCC 4 cut(s) 65, 117, 955, 970
HapII CCGG 5 cut(s) 77, 722, 785, 796, 1127
HgaI GACGC 6 cut(s) 41, 250, 293, 512, 552, 706
Hin1I GRCGYC 2 cut(s) 33, 504
Hin1II CATG 6 cut(s) 153, 313, 515, 631, 710, 1022
HinfI GANTC 7 cut(s) 245, 272, 421, 664, 703, 988, 1072
HpaII CCGG 5 cut(s) 77, 722, 785, 796, 1127
HphI GGTGA 3 cut(s) 293, 592, 706
Hpy166II GTNNAC 2 cut(s) 487, 1142
Hpy188I TCNGA 5 cut(s) 250, 442, 597, 807, 1053
Hpy188III TCNNGA 4 cut(s) 512, 532, 707, 824
Hpy8I GTNNAC 2 cut(s) 487, 1142
Hpy99I CGWCG 7 cut(s) 116, 143, 266, 287, 442, 506, 568
HpyAV CCTTC 5 cut(s) 8, 751, 821, 945, 1196
HpyCH4III ACNGT 2 cut(s) 891, 1049
HpyCH4IV ACGT 2 cut(s) 111, 372
HpyCH4V TGCA 6 cut(s) 11, 348, 363, 369, 685, 840
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 433, 637
HpyF3I CTNAG 3 cut(s) 207, 596, 957
HpySE526I ACGT 2 cut(s) 111, 372
Hsp92I GRCGYC 2 cut(s) 33, 504
Hsp92II CATG 6 cut(s) 153, 313, 515, 631, 710, 1022
Kzo9I GATC 5 cut(s) 442, 677, 715, 1024, 1132
LmnI GCTCC 3 cut(s) 75, 176, 396
Lsp1109I GCAGC 1 cut(s) 342
LweI GCATC 2 cut(s) 372, 771
MaeI CTAG 3 cut(s) 480, 1137, 1196
MaeII ACGT 2 cut(s) 111, 372
MaeIII GTNAC 3 cut(s) 314, 644, 694
MalI GATC 5 cut(s) 444, 679, 717, 1026, 1134
MboI GATC 5 cut(s) 442, 677, 715, 1024, 1132
MboII GAAGA 4 cut(s) 869, 1034, 1160, 1192
MflI RGATCY 2 cut(s) 677, 1024
MhlI GDGCHC 3 cut(s) 72, 297, 401
MluCI AATT 5 cut(s) 327, 524, 917, 1065, 1211
MlyI GAGTC 3 cut(s) 239, 266, 712
MmeI TCCRAC 2 cut(s) 273, 420
MseI TTAA 2 cut(s) 900, 1068
MslI CAYNNNNRTG 1 cut(s) 310
MspI CCGG 5 cut(s) 77, 722, 785, 796, 1127
MspR9I CCNGG 1 cut(s) 62
Mva1269I GAATGC 1 cut(s) 610
MvaI CCWGG 1 cut(s) 62
MvnI CGCG 3 cut(s) 389, 700, 1077
MwoI GCNNNNNNNGC 3 cut(s) 62, 433, 637
NcoI CCATGG 1 cut(s) 149
NdeI CATATG 1 cut(s) 634
NdeII GATC 5 cut(s) 442, 677, 715, 1024, 1132
NlaIII CATG 6 cut(s) 153, 313, 515, 631, 710, 1022
NlaIV GGNNCC 4 cut(s) 158, 343, 398, 777
NmeAIII GCCGAG 1 cut(s) 91
NmuCI GTSAC 1 cut(s) 694
NspI RCATGY 1 cut(s) 631
OliI CACNNNNGTG 1 cut(s) 310
PagI TCATGA 2 cut(s) 511, 706
PceI AGGCCT 2 cut(s) 955, 970
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PctI GAATGC 1 cut(s) 610
PfeI GAWTC 4 cut(s) 421, 664, 988, 1072
PflFI GACNNNGTC 1 cut(s) 287
PflMI CCANNNNNTGG 1 cut(s) 150
PkrI GCNGC 2 cut(s) 119, 357
PleI GAGTC 3 cut(s) 239, 266, 711
PpsI GAGTC 3 cut(s) 239, 266, 711
PpuMI RGGWCCY 1 cut(s) 342
Psp124BI GAGCTC 2 cut(s) 72, 297
Psp5II RGGWCCY 1 cut(s) 342
Psp6I CCWGG 1 cut(s) 60
PspFI CCCAGC 2 cut(s) 36, 493
PspGI CCWGG 1 cut(s) 60
PspN4I GGNNCC 4 cut(s) 158, 343, 398, 777
PspPI GGNCC 4 cut(s) 135, 156, 342, 793
PspPPI RGGWCCY 1 cut(s) 342
PstI CTGCAG 1 cut(s) 13
PsuI RGATCY 2 cut(s) 677, 1024
PsyI GACNNNGTC 1 cut(s) 287
RsaI GTAC 1 cut(s) 416
RsaNI GTAC 1 cut(s) 415
RseI CAYNNNNRTG 1 cut(s) 310
SacI GAGCTC 2 cut(s) 72, 297
SaqAI TTAA 2 cut(s) 900, 1068
SatI GCNGC 2 cut(s) 118, 356
Sau3AI GATC 5 cut(s) 442, 677, 715, 1024, 1132
Sau96I GGNCC 4 cut(s) 135, 156, 342, 793
SchI GAGTC 3 cut(s) 239, 266, 712
ScrFI CCNGG 1 cut(s) 62
SduI GDGCHC 3 cut(s) 72, 297, 401
SfaNI GCATC 2 cut(s) 372, 771
SfcI CTRYAG 2 cut(s) 9, 1101
SinI GGWCC 4 cut(s) 135, 156, 342, 793
SmiMI CAYNNNNRTG 1 cut(s) 310
SmlI CTYRAG 1 cut(s) 939
SmoI CTYRAG 1 cut(s) 939
Sse9I AATT 5 cut(s) 327, 524, 917, 1065, 1211
SseBI AGGCCT 2 cut(s) 955, 970
SsiI CCGC 8 cut(s) 43, 74, 118, 154, 377, 700, 1077, 1112
SspMI CTAG 3 cut(s) 480, 1137, 1196
SstI GAGCTC 2 cut(s) 72, 297
StuI AGGCCT 2 cut(s) 955, 970
StyD4I CCNGG 1 cut(s) 60
StyI CCWWGG 2 cut(s) 149, 401
TaaI ACNGT 2 cut(s) 891, 1049
TaiI ACGT 2 cut(s) 114, 375
TaqI TCGA 5 cut(s) 165, 264, 270, 291, 445
TasI AATT 5 cut(s) 327, 524, 917, 1065, 1211
TatI WGTACW 1 cut(s) 414
TauI GCSGC 1 cut(s) 120
TfiI GAWTC 4 cut(s) 421, 664, 988, 1072
Tru1I TTAA 2 cut(s) 900, 1068
Tru9I TTAA 2 cut(s) 900, 1068
TscAI CASTG 1 cut(s) 211
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 1 cut(s) 355
Tsp45I GTSAC 1 cut(s) 694
TspDTI ATGAA 6 cut(s) 17, 500, 617, 723, 870, 1035
TspGWI ACGGA 2 cut(s) 127, 227
TspRI CASTG 1 cut(s) 211
Tth111I GACNNNGTC 1 cut(s) 287
Van91I CCANNNNNTGG 1 cut(s) 150
VpaK11BI GGWCC 4 cut(s) 135, 156, 342, 793
XagI CCTNNNNNAGG 1 cut(s) 239
XceI RCATGY 1 cut(s) 631
XspI CTAG 3 cut(s) 480, 1137, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.