Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001706.1

Orthogroup ID

OG0004460

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 5008

Gene Structure 5008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001706.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2116 bp

atgaaatctgcagaagaagaaccctccacagacgcccagcaccgccaaatccaagccttcctggccgagctcccgccggaggtaatcatcaacatcctctcccgcctccacgtcggccgcctcctctgtttcaggtccgtcgccagaccatggcggtccctaatcgacagctcctacttcaaaaacctccacctccttcattccacccagaccaaatccaatctcgctcttatcctccgtaaggactccgacctctactgcgtcgatttcgattcgctaaacgatgccgtcgagctcaatcacccgctcatgtgttacagcaaccgaattagggttctggggtcctgcaacgggctgctgtgcatctgcaacgtggcggaggacatcgcgttgtggagtccctggattaaaaagtaccggattctgccgtctttgccgtcggatcgaaagagggacaaaggtatgtgcttgtgtggtgctagggtttacgggctgggatacgactccgttcatgacgactataaattggtcaggatttcgcagtttatcggatgggactatgcgtcgtttgagagtgaggtgaaagtttatagtctgagaatgaatgcgtggagaaaggtggatgacatgccgtatgtgctgtgttacacgcgaaaaatggggattcttgtgagtggatctgtgcattgggtggtgacgcggagtcatgaagtggatcaacccgcaaccgagttggttattggatttgatgtagagaaggagagatttggggaggtgccgatgccggagatggaccggaagtgtcagattgatgtggggtatttggaagggtgtctttgcattatagccaagtatgaagatatgggtgttgatgtttggactatcaaacagtatggggttaaggagacttggtgtaaattgtttactgtgaaacaggcgcaaggggttagaaggcctaagagtattaagcctctggtttattcaaagaatcgtcgacaagttttgctggaacaaaaccatgaagatcttgtttggtttgacttggaaagtcagatggtcaataaaattaagattcgcggtttgccagatttatttgaggctatagtctgtgcggaaacccttgttccggttgaccctagtaaacgagaagacaaggaaaaagagggaaaaaagaataagaagagctggagaacggtcgaggccgtaccctccttttgtccttttatctccaagacgtcgacatccaccattcgggttgagtcgacgactgttggaggggatcaagtttgtcctcggtttgccgctctggaatggtggctgcaggtgaatggagagtttgggatcctgggctcctgccagggtcatagaggtctggtttgggccctaggccgagtggtggattggatgttgtaccagcagcgtctccgaatctgctgcgatcggatcgtgttctgttggaatccttcttccacggttggcagcaggcgtggtgatgttctctgtctgatctgtgaatttggaaggactggtggattcgcctctatgagatggcgatggagagaactcgtgggaaagatgctgctcttcctgaggctatttcacacaaggtctgcgggtcttctcgaagagaggacgccgacgctaggctggagagtcagtacgtcgtcggttggagtgacaatgtggtgttggtgcggcggcgccggcaagcacaaaaggtttgatggatgggctgctagggttcatcctttttgggcttgggtttggatttgtttttcggatttgggcttgggcatgtttgggtggactagggcagtgataattgggctctctgaggcttggatccggatttgggatcctgacggtttttttataaaaacttgggatccaggacgacttctgttttggtacctagtttgttatttttcttgggatcaatacctgcgaggaactgtaggtcttattggtctgaggttgtcagcgagtctactgatggattctgcggataaatttaattgtcagccttttattagtttacttccccctgaacttcactcaattggtgaagtggtattgcgtttagcggtgtctctttctgacggccccactgaagcgg

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box FBA_1

Protein Analysis

705

Amino Acids

80.85

Weight (kDa)

8.61

Isoelectric Point (pI)

37.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12560 AT4G12560 AT4G12560 AT4G22390 AT4G22390
fragaria_vesca	FvH4_3g00900 FvH4_3g00900
malus_domestica	MD05G1358500.v1.1 MD10G1332600.v1.1
prunus_persica	Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1
pyrus_communis	pycom05g32420 pycom10g28200
rosa_chinensis	RchiOBHm_Chr5g0001381
rosa_laevigata	RLG00000030926
rosa_multiflora	Rmu_sc0001706.1_g000001 Rmu_sc0003749.1_g000016 Rmu_sc0016478.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074980
rosa_rugosa	Rorug04G0390300
rosa_samantha	Rh5AG010700 Rh5BG013400 Rh5CG011700 Rh5DG011100
rosa_wichuraiana	Rw5G001020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1874
AarI	CACCTGC	1 cut(s)	1312
AatII	GACGTC	1 cut(s)	1238
Acc36I	ACCTGC	2 cut(s)	1312, 1950
Acc65I	GGTACC	1 cut(s)	1908
AccB1I	GGYRCC	3 cut(s)	775, 1700, 1908
AccB7I	CCANNNNNTGG	1 cut(s)	150
AccBSI	CCGCTC	2 cut(s)	307, 1304
AccI	GTMKAC	4 cut(s)	994, 1238, 1262, 1987
AccII	CGCG	4 cut(s)	389, 652, 700, 1077
AccIII	TCCGGA	1 cut(s)	1845
AcoI	YGGCCR	2 cut(s)	63, 115
AcsI	RAATTY	2 cut(s)	1514, 2009
AcyI	GRCGYC	4 cut(s)	33, 1235, 1634, 1701
AfaI	GTAC	5 cut(s)	416, 1206, 1412, 1660, 1910
AgsI	TTSAA	2 cut(s)	181, 984
AhdI	GACNNNNNGTC	2 cut(s)	562, 702
AjiI	CACGTC	1 cut(s)	112
AjnI	CCWGG	5 cut(s)	60, 401, 1344, 1356, 1888
AluBI	AGCT	4 cut(s)	70, 171, 295, 1185
AluI	AGCT	4 cut(s)	70, 171, 295, 1185
Alw21I	GWGCWC	2 cut(s)	72, 297
Alw26I	GTCTC	3 cut(s)	899, 1427, 2094
Aor13HI	TCCGGA	1 cut(s)	1845
AoxI	GGCC	7 cut(s)	63, 115, 953, 1200, 1380, 1387, 2101
ApaI	GGGCCC	1 cut(s)	1384
ApeKI	GCWGC	7 cut(s)	355, 1318, 1417, 1434, 1479, 1579, 1733
ApoI	RAATTY	2 cut(s)	1514, 2009
ArsI	GACNNNNNNTTYG	2 cut(s)	1887, 1919
Asp718I	GGTACC	1 cut(s)	1908
AspA2I	CCTAGG	1 cut(s)	1384
AspLEI	GCGC	2 cut(s)	940, 1703
AspS9I	GGNCC	7 cut(s)	135, 156, 342, 793, 1380, 1381, 2102
AsuHPI	GGTGA	6 cut(s)	293, 592, 706, 1336, 1502, 2075
AvaII	GGWCC	4 cut(s)	135, 156, 342, 793
AvrII	CCTAGG	1 cut(s)	1384
AxyI	CCTNAGG	1 cut(s)	1589
BaeGI	GKGCMC	1 cut(s)	1384
BamHI	GGATCC	4 cut(s)	1341, 1842, 1855, 1885
BanI	GGYRCC	3 cut(s)	775, 1700, 1908
BanII	GRGCYC	5 cut(s)	72, 297, 1352, 1384, 1830
BauI	CACGAG	1 cut(s)	1565
BbsI	GAAGAC	2 cut(s)	1155, 1610
Bbv12I	GWGCWC	2 cut(s)	72, 297
BbvI	GCAGC	7 cut(s)	342, 1305, 1421, 1429, 1491, 1566, 1720
BccI	CCATC	8 cut(s)	546, 784, 1048, 1542, 1548, 1718, 1722, 1987
BceAI	ACGGC	5 cut(s)	272, 412, 421, 616, 1187
BcgI	CGANNNNNNTGC	2 cut(s)	1416, 1450
BciT130I	CCWGG	5 cut(s)	62, 403, 1346, 1358, 1890
BciVI	GTATCC	1 cut(s)	491
BcoDI	GTCTC	3 cut(s)	899, 1427, 2094
BfaI	CTAG	7 cut(s)	480, 1137, 1385, 1643, 1737, 1809, 1913
BfmI	CTRYAG	4 cut(s)	9, 1101, 1319, 1953
BfoI	RGCGCY	1 cut(s)	1704
BfuAI	ACCTGC	2 cut(s)	1312, 1950
BfuI	GTATCC	1 cut(s)	491
BglI	GCCNNNNNGGC	1 cut(s)	62
BglII	AGATCT	1 cut(s)	1024
BlnI	CCTAGG	1 cut(s)	1384
Bme1390I	CCNGG	5 cut(s)	62, 403, 1346, 1358, 1890
Bme18I	GGWCC	4 cut(s)	135, 156, 342, 793
BmeRI	GACNNNNNGTC	2 cut(s)	562, 702
BmgBI	CACGTC	1 cut(s)	112
BmgT120I	GGNCC	7 cut(s)	135, 156, 342, 793, 1380, 1381, 2102
BmrFI	CCNGG	5 cut(s)	62, 403, 1346, 1358, 1890
BmsI	GCATC	4 cut(s)	274, 372, 771, 1566
BpiI	GAAGAC	2 cut(s)	1155, 1610
BpmI	CTGGAG	2 cut(s)	1207, 1669
BsaHI	GRCGYC	4 cut(s)	33, 1235, 1634, 1701
BsaJI	CCNNGG	7 cut(s)	149, 401, 1292, 1345, 1357, 1384, 1470
BsaWI	WCCGGW	4 cut(s)	417, 795, 1126, 1845
BsaXI	ACNNNNNCTCC	6 cut(s)	83, 113, 896, 926, 1642, 1672
Bse118I	RCCGGY	1 cut(s)	1703
Bse1I	ACTGG	1 cut(s)	1531
Bse21I	CCTNAGG	1 cut(s)	1589
BseAI	TCCGGA	1 cut(s)	1845
BseBI	CCWGG	5 cut(s)	62, 403, 1346, 1358, 1890
BseDI	CCNNGG	7 cut(s)	149, 401, 1292, 1345, 1357, 1384, 1470
BseGI	GGATG	7 cut(s)	93, 557, 628, 1241, 1410, 1733, 1744
BseMII	CTCAG	4 cut(s)	587, 1580, 1824, 1961
BseNI	ACTGG	1 cut(s)	1531
BseRI	GAGGAG	1 cut(s)	113
BseSI	GKGCMC	1 cut(s)	1384
BseX3I	CGGCCG	1 cut(s)	115
BseXI	GCAGC	7 cut(s)	342, 1305, 1421, 1429, 1491, 1566, 1720
BseYI	CCCAGC	2 cut(s)	36, 493
Bsh1236I	CGCG	4 cut(s)	389, 652, 700, 1077
Bsh1285I	CGRYCG	3 cut(s)	118, 1197, 1441
BshFI	GGCC	7 cut(s)	65, 117, 955, 1202, 1382, 1389, 2103
BshNI	GGYRCC	3 cut(s)	775, 1700, 1908
BsiEI	CGRYCG	3 cut(s)	118, 1197, 1441
BsiHKAI	GWGCWC	2 cut(s)	72, 297
BsiSI	CCGG	7 cut(s)	77, 418, 785, 796, 1127, 1704, 1846
BslFI	GGGAC	4 cut(s)	142, 384, 467, 569
BsmAI	GTCTC	3 cut(s)	899, 1427, 2094
BsmBI	CGTCTC	1 cut(s)	1427
BsmFI	GGGAC	4 cut(s)	142, 384, 467, 569
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	7 cut(s)	65, 117, 955, 1202, 1382, 1389, 2103
Bsp120I	GGGCCC	1 cut(s)	1380
Bsp1286I	GDGCHC	5 cut(s)	72, 297, 1352, 1384, 1830
Bsp13I	TCCGGA	1 cut(s)	1845
Bsp19I	CCATGG	1 cut(s)	149
BspANI	GGCC	7 cut(s)	65, 117, 955, 1202, 1382, 1389, 2103
BspCNI	CTCAG	4 cut(s)	588, 1581, 1825, 1962
BspEI	TCCGGA	1 cut(s)	1845
BspFNI	CGCG	4 cut(s)	389, 652, 700, 1077
BspHI	TCATGA	2 cut(s)	511, 706
BspMAI	CTGCAG	2 cut(s)	13, 1323
BspMI	ACCTGC	2 cut(s)	1312, 1950
BspQI	GCTCTTC	2 cut(s)	1175, 1589
BspT107I	GGYRCC	3 cut(s)	775, 1700, 1908
BsrBI	CCGCTC	2 cut(s)	307, 1304
BsrFI	RCCGGY	1 cut(s)	1703
BsrI	ACTGG	1 cut(s)	1531
BssAI	RCCGGY	1 cut(s)	1703
BssECI	CCNNGG	7 cut(s)	149, 401, 1292, 1345, 1357, 1384, 1470
BssNI	GRCGYC	4 cut(s)	33, 1235, 1634, 1701
BssSI	CACGAG	1 cut(s)	1565
BssT1I	CCWWGG	2 cut(s)	149, 1384
Bst2BI	CACGAG	1 cut(s)	1565
Bst2UI	CCWGG	5 cut(s)	62, 403, 1346, 1358, 1890
Bst4CI	ACNGT	7 cut(s)	891, 928, 1195, 1270, 1474, 1865, 1954
Bst6I	CTCTTC	3 cut(s)	1175, 1589, 1620
BstACI	GRCGYC	4 cut(s)	33, 1235, 1634, 1701
BstC8I	GCNNGC	3 cut(s)	1484, 1705, 1709
BstDEI	CTNAG	5 cut(s)	596, 957, 1589, 1833, 1970
BstDSI	CCRYGG	2 cut(s)	149, 1470
BstENI	CCTNNNNNAGG	1 cut(s)	239
BstF5I	GGATG	7 cut(s)	93, 557, 628, 1241, 1410, 1733, 1744
BstFNI	CGCG	4 cut(s)	389, 652, 700, 1077
BstH2I	RGCGCY	1 cut(s)	1704
BstHHI	GCGC	2 cut(s)	940, 1703
BstMAI	GTCTC	3 cut(s)	899, 1427, 2094
BstMCI	CGRYCG	3 cut(s)	118, 1197, 1441
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 433, 637, 1704
BstNI	CCWGG	5 cut(s)	62, 403, 1346, 1358, 1890
BstNSI	RCATGY	2 cut(s)	631, 1798
BstSCI	CCNGG	5 cut(s)	60, 401, 1344, 1356, 1888
BstSFI	CTRYAG	4 cut(s)	9, 1101, 1319, 1953
BstSLI	GKGCMC	1 cut(s)	1384
BstUI	CGCG	4 cut(s)	389, 652, 700, 1077
BstV1I	GCAGC	7 cut(s)	342, 1305, 1421, 1429, 1491, 1566, 1720
BstV2I	GAAGAC	2 cut(s)	1155, 1610
BstX2I	RGATCY	6 cut(s)	677, 1024, 1341, 1842, 1855, 1885
BstYI	RGATCY	6 cut(s)	677, 1024, 1341, 1842, 1855, 1885
BstZI	CGGCCG	1 cut(s)	115
Bsu36I	CCTNAGG	1 cut(s)	1589
BsuI	GTATCC	1 cut(s)	491
BsuRI	GGCC	7 cut(s)	65, 117, 955, 1202, 1382, 1389, 2103
BtgI	CCRYGG	2 cut(s)	149, 1470
BtgZI	GCGATG	2 cut(s)	370, 1567
BtrI	CACGTC	1 cut(s)	112
BtsCI	GGATG	7 cut(s)	93, 557, 628, 1241, 1410, 1733, 1744
BtsI	GCAGTG	1 cut(s)	1821
BtsIMutI	CAGTG	2 cut(s)	1821, 2106
BveI	ACCTGC	2 cut(s)	1312, 1950
Cac8I	GCNNGC	3 cut(s)	1484, 1705, 1709
CciI	TCATGA	2 cut(s)	511, 706
CfoI	GCGC	2 cut(s)	940, 1703
Cfr10I	RCCGGY	1 cut(s)	1703
Cfr13I	GGNCC	7 cut(s)	135, 156, 342, 793, 1380, 1381, 2102
CseI	GACGC	7 cut(s)	41, 250, 552, 706, 1409, 1642, 1648
Csp6I	GTAC	5 cut(s)	415, 1205, 1411, 1659, 1909
CviAII	CATG	7 cut(s)	150, 310, 512, 628, 707, 1019, 1795
CviQI	GTAC	5 cut(s)	415, 1205, 1411, 1659, 1909
DdeI	CTNAG	5 cut(s)	596, 957, 1589, 1833, 1970
DinI	GGCGCC	1 cut(s)	1702
DriI	GACNNNNNGTC	2 cut(s)	562, 702
EaeI	YGGCCR	2 cut(s)	63, 115
EagI	CGGCCG	1 cut(s)	115
Eam1104I	CTCTTC	3 cut(s)	1175, 1589, 1620
Eam1105I	GACNNNNNGTC	2 cut(s)	562, 702
EarI	CTCTTC	3 cut(s)	1175, 1589, 1620
EciI	GGCGGA	1 cut(s)	392
Ecl136II	GAGCTC	2 cut(s)	70, 295
EclXI	CGGCCG	1 cut(s)	115
Eco130I	CCWWGG	2 cut(s)	149, 1384
Eco147I	AGGCCT	1 cut(s)	955
Eco24I	GRGCYC	5 cut(s)	72, 297, 1352, 1384, 1830
Eco47I	GGWCC	4 cut(s)	135, 156, 342, 793
Eco52I	CGGCCG	1 cut(s)	115
Eco53kI	GAGCTC	2 cut(s)	70, 295
Eco81I	CCTNAGG	1 cut(s)	1589
EcoICRI	GAGCTC	2 cut(s)	70, 295
EcoNI	CCTNNNNNAGG	1 cut(s)	239
EcoO109I	RGGNCCY	2 cut(s)	342, 1381
EcoRII	CCWGG	5 cut(s)	60, 401, 1344, 1356, 1888
EcoT14I	CCWWGG	2 cut(s)	149, 1384
EcoT38I	GRGCYC	5 cut(s)	72, 297, 1352, 1384, 1830
EgeI	GGCGCC	1 cut(s)	1702
EheI	GGCGCC	1 cut(s)	1702
ErhI	CCWWGG	2 cut(s)	149, 1384
Esp3I	CGTCTC	1 cut(s)	1427
FaeI	CATG	7 cut(s)	153, 313, 515, 631, 710, 1022, 1798
FalI	AAGNNNNNCTT	2 cut(s)	819, 851
FaqI	GGGAC	4 cut(s)	142, 384, 467, 569
FatI	CATG	7 cut(s)	149, 309, 511, 627, 706, 1018, 1794
FauI	CCCGC	5 cut(s)	81, 110, 312, 730, 1606
FblI	GTMKAC	4 cut(s)	994, 1238, 1262, 1987
FokI	GGATG	7 cut(s)	80, 564, 635, 1228, 1417, 1731, 1740
FriOI	GRGCYC	5 cut(s)	72, 297, 1352, 1384, 1830
FspBI	CTAG	7 cut(s)	480, 1137, 1385, 1643, 1737, 1809, 1913
GlaI	GCGC	2 cut(s)	939, 1702
GsaI	CCCAGC	2 cut(s)	40, 497
GsuI	CTGGAG	2 cut(s)	1207, 1669
HaeII	RGCGCY	1 cut(s)	1704
HaeIII	GGCC	7 cut(s)	65, 117, 955, 1202, 1382, 1389, 2103
HapII	CCGG	7 cut(s)	77, 418, 785, 796, 1127, 1704, 1846
HgaI	GACGC	7 cut(s)	41, 250, 552, 706, 1409, 1642, 1648
HhaI	GCGC	2 cut(s)	940, 1703
Hin1I	GRCGYC	4 cut(s)	33, 1235, 1634, 1701
Hin1II	CATG	7 cut(s)	153, 313, 515, 631, 710, 1022, 1798
Hin6I	GCGC	2 cut(s)	938, 1701
HinP1I	GCGC	2 cut(s)	938, 1701
HincII	GTYRAC	4 cut(s)	995, 1132, 1239, 1263
HindII	GTYRAC	4 cut(s)	995, 1132, 1239, 1263
HpaII	CCGG	7 cut(s)	77, 418, 785, 796, 1127, 1704, 1846
HphI	GGTGA	6 cut(s)	293, 592, 706, 1336, 1502, 2075
Hpy188III	TCNNGA	8 cut(s)	512, 532, 707, 1307, 1588, 1622, 1846, 1859
HpyAV	CCTTC	7 cut(s)	67, 206, 751, 821, 945, 1473, 1515
HpyCH4III	ACNGT	7 cut(s)	891, 928, 1195, 1270, 1474, 1865, 1954
HpyCH4IV	ACGT	4 cut(s)	111, 372, 1235, 1661
HpyCH4V	TGCA	7 cut(s)	11, 348, 363, 369, 685, 840, 1321
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 433, 637, 1704
HpyF3I	CTNAG	5 cut(s)	596, 957, 1589, 1833, 1970
HpySE526I	ACGT	4 cut(s)	111, 372, 1235, 1661
Hsp92I	GRCGYC	4 cut(s)	33, 1235, 1634, 1701
Hsp92II	CATG	7 cut(s)	153, 313, 515, 631, 710, 1022, 1798
HspAI	GCGC	2 cut(s)	938, 1701
KasI	GGCGCC	1 cut(s)	1700
Kpn2I	TCCGGA	1 cut(s)	1845
KpnI	GGTACC	1 cut(s)	1912
KroI	GCCGGC	1 cut(s)	1703
KroNI	GCCGGC	1 cut(s)	1705
LguI	GCTCTTC	2 cut(s)	1175, 1589
LmnI	GCTCC	3 cut(s)	75, 176, 1355
Lsp1109I	GCAGC	7 cut(s)	342, 1305, 1421, 1429, 1491, 1566, 1720
LweI	GCATC	4 cut(s)	274, 372, 771, 1566
MaeI	CTAG	7 cut(s)	480, 1137, 1385, 1643, 1737, 1809, 1913
MaeII	ACGT	4 cut(s)	111, 372, 1235, 1661
MaeIII	GTNAC	4 cut(s)	314, 644, 694, 1675
MbiI	CCGCTC	2 cut(s)	307, 1304
MfeI	CAATTG	1 cut(s)	2058
MflI	RGATCY	6 cut(s)	677, 1024, 1341, 1842, 1855, 1885
MhlI	GDGCHC	5 cut(s)	72, 297, 1352, 1384, 1830
MluCI	AATT	9 cut(s)	327, 524, 917, 1065, 1514, 1821, 2009, 2014, 2058
Mly113I	GGCGCC	1 cut(s)	1701
MlyI	GAGTC	7 cut(s)	239, 406, 497, 712, 1268, 1662, 1993
MmeI	TCCRAC	5 cut(s)	273, 420, 1252, 1436, 1651
MroI	TCCGGA	1 cut(s)	1845
MroNI	GCCGGC	1 cut(s)	1703
MseI	TTAA	5 cut(s)	408, 900, 966, 1068, 2013
MspI	CCGG	7 cut(s)	77, 418, 785, 796, 1127, 1704, 1846
MspR9I	CCNGG	5 cut(s)	62, 403, 1346, 1358, 1890
MunI	CAATTG	1 cut(s)	2058
Mva1269I	GAATGC	1 cut(s)	610
MvaI	CCWGG	5 cut(s)	62, 403, 1346, 1358, 1890
MvnI	CGCG	4 cut(s)	389, 652, 700, 1077
MwoI	GCNNNNNNNGC	4 cut(s)	62, 433, 637, 1704
NaeI	GCCGGC	1 cut(s)	1705
NarI	GGCGCC	1 cut(s)	1701
NcoI	CCATGG	1 cut(s)	149
NgoMIV	GCCGGC	1 cut(s)	1703
NlaIII	CATG	7 cut(s)	153, 313, 515, 631, 710, 1022, 1798
NmeAIII	GCCGAG	2 cut(s)	91, 1415
NmuCI	GTSAC	2 cut(s)	694, 1675
NspI	RCATGY	2 cut(s)	631, 1798
PagI	TCATGA	2 cut(s)	511, 706
PaqCI	CACCTGC	1 cut(s)	1312
PceI	AGGCCT	1 cut(s)	955
PciSI	GCTCTTC	2 cut(s)	1175, 1589
PcsI	WCGNNNNNNNCGW	1 cut(s)	288
PctI	GAATGC	1 cut(s)	610
PdiI	GCCGGC	1 cut(s)	1705
PfeI	GAWTC	9 cut(s)	272, 421, 664, 988, 1072, 1428, 1459, 1533, 1997
PflMI	CCANNNNNTGG	1 cut(s)	150
PfoI	TCCNGGA	1 cut(s)	1888
Ple19I	CGATCG	1 cut(s)	1441
PleI	GAGTC	7 cut(s)	239, 405, 497, 711, 1267, 1661, 1992
PluTI	GGCGCC	1 cut(s)	1704
PpsI	GAGTC	7 cut(s)	239, 405, 497, 711, 1267, 1661, 1992
PpuMI	RGGWCCY	1 cut(s)	342
PsiI	TTATAA	1 cut(s)	1874
Psp124BI	GAGCTC	2 cut(s)	72, 297
Psp5II	RGGWCCY	1 cut(s)	342
Psp6I	CCWGG	5 cut(s)	60, 401, 1344, 1356, 1888
PspFI	CCCAGC	2 cut(s)	36, 493
PspGI	CCWGG	5 cut(s)	60, 401, 1344, 1356, 1888
PspOMI	GGGCCC	1 cut(s)	1380
PspPI	GGNCC	7 cut(s)	135, 156, 342, 793, 1380, 1381, 2102
PspPPI	RGGWCCY	1 cut(s)	342
PstI	CTGCAG	2 cut(s)	13, 1323
PsuI	RGATCY	6 cut(s)	677, 1024, 1341, 1842, 1855, 1885
PvuI	CGATCG	1 cut(s)	1441
RsaI	GTAC	5 cut(s)	416, 1206, 1412, 1660, 1910
RsaNI	GTAC	5 cut(s)	415, 1205, 1411, 1659, 1909
SacI	GAGCTC	2 cut(s)	72, 297
SalI	GTCGAC	3 cut(s)	993, 1237, 1261
SapI	GCTCTTC	2 cut(s)	1175, 1589
SaqAI	TTAA	5 cut(s)	408, 900, 966, 1068, 2013
Sau96I	GGNCC	7 cut(s)	135, 156, 342, 793, 1380, 1381, 2102
SchI	GAGTC	7 cut(s)	239, 406, 497, 712, 1268, 1662, 1993
ScrFI	CCNGG	5 cut(s)	62, 403, 1346, 1358, 1890
SduI	GDGCHC	5 cut(s)	72, 297, 1352, 1384, 1830
SfaNI	GCATC	4 cut(s)	274, 372, 771, 1566
SfcI	CTRYAG	4 cut(s)	9, 1101, 1319, 1953
SfoI	GGCGCC	1 cut(s)	1702
SinI	GGWCC	4 cut(s)	135, 156, 342, 793
Sse9I	AATT	9 cut(s)	327, 524, 917, 1065, 1514, 1821, 2009, 2014, 2058
SseBI	AGGCCT	1 cut(s)	955
SspDI	GGCGCC	1 cut(s)	1700
SspMI	CTAG	7 cut(s)	480, 1137, 1385, 1643, 1737, 1809, 1913
SstI	GAGCTC	2 cut(s)	72, 297
StuI	AGGCCT	1 cut(s)	955
StyD4I	CCNGG	5 cut(s)	60, 401, 1344, 1356, 1888
StyI	CCWWGG	2 cut(s)	149, 1384
TaaI	ACNGT	7 cut(s)	891, 928, 1195, 1270, 1474, 1865, 1954
TaiI	ACGT	4 cut(s)	114, 375, 1238, 1664
TasI	AATT	9 cut(s)	327, 524, 917, 1065, 1514, 1821, 2009, 2014, 2058
TauI	GCSGC	4 cut(s)	120, 1304, 1698, 1701
TfiI	GAWTC	9 cut(s)	272, 421, 664, 988, 1072, 1428, 1459, 1533, 1997
Tru1I	TTAA	5 cut(s)	408, 900, 966, 1068, 2013
Tru9I	TTAA	5 cut(s)	408, 900, 966, 1068, 2013
TscAI	CASTG	2 cut(s)	1821, 2113
TseFI	GTSAC	2 cut(s)	694, 1675
TseI	GCWGC	7 cut(s)	355, 1318, 1417, 1434, 1479, 1579, 1733
Tsp45I	GTSAC	2 cut(s)	694, 1675
TspDTI	ATGAA	8 cut(s)	17, 188, 500, 617, 723, 870, 1035, 1733
TspGWI	ACGGA	3 cut(s)	127, 227, 496
TspRI	CASTG	2 cut(s)	1821, 2113
Van91I	CCANNNNNTGG	1 cut(s)	150
VpaK11BI	GGWCC	4 cut(s)	135, 156, 342, 793
XagI	CCTNNNNNAGG	1 cut(s)	239
XapI	RAATTY	2 cut(s)	1514, 2009
XceI	RCATGY	2 cut(s)	631, 1798
XmaJI	CCTAGG	1 cut(s)	1384
XmiI	GTMKAC	4 cut(s)	994, 1238, 1262, 1987
XspI	CTAG	7 cut(s)	480, 1137, 1385, 1643, 1737, 1809, 1913
ZraI	GACGTC	1 cut(s)	1236

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.