f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12560 AT4G12560 AT4G12560 AT4G22390 AT4G22390 |
| fragaria_vesca | FvH4_3g00900 FvH4_3g00900 |
| malus_domestica | MD05G1358500.v1.1 MD10G1332600.v1.1 |
| prunus_persica | Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 Prupe.4G009600_v2.0.a1 |
| pyrus_communis | pycom05g32420 pycom10g28200 |
| rosa_chinensis | RchiOBHm_Chr5g0001381 |
| rosa_laevigata | RLG00000030926 |
| rosa_multiflora | Rmu_sc0001706.1_g000001 Rmu_sc0003749.1_g000016 Rmu_sc0016478.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074980 |
| rosa_rugosa | Rorug04G0390300 |
| rosa_samantha | Rh5AG010700 Rh5BG013400 Rh5CG011700 Rh5DG011100 |
| rosa_wichuraiana | Rw5G001020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 847 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 300 |
| AccBSI | CCGCTC | 1 cut(s) | 457 |
| AccI | GTMKAC | 1 cut(s) | 1066 |
| AccII | CGCG | 4 cut(s) | 102, 539, 772, 1149 |
| AclWI | GGATC | 3 cut(s) | 600, 757, 795 |
| AcoI | YGGCCR | 2 cut(s) | 213, 265 |
| AcyI | GRCGYC | 1 cut(s) | 183 |
| AfaI | GTAC | 2 cut(s) | 87, 566 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 229, 300, 391, 481, 501, 1198 |
| AflIII | ACRYGT | 1 cut(s) | 100 |
| AgsI | TTSAA | 3 cut(s) | 331, 1056, 1282 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 774 |
| AjiI | CACGTC | 1 cut(s) | 262 |
| AjnI | CCWGG | 2 cut(s) | 210, 551 |
| AluBI | AGCT | 3 cut(s) | 220, 321, 445 |
| AluI | AGCT | 3 cut(s) | 220, 321, 445 |
| Alw21I | GWGCWC | 2 cut(s) | 222, 447 |
| Alw26I | GTCTC | 2 cut(s) | 109, 971 |
| AlwI | GGATC | 3 cut(s) | 600, 757, 795 |
| AoxI | GGCC | 3 cut(s) | 213, 265, 1025 |
| ApeKI | GCWGC | 1 cut(s) | 505 |
| AseI | ATTAAT | 1 cut(s) | 39 |
| AspS9I | GGNCC | 4 cut(s) | 285, 306, 492, 865 |
| AsuHPI | GGTGA | 3 cut(s) | 443, 697, 778 |
| AvaII | GGWCC | 4 cut(s) | 285, 306, 492, 865 |
| BanI | GGYRCC | 1 cut(s) | 847 |
| BanII | GRGCYC | 2 cut(s) | 222, 447 |
| BbsI | GAAGAC | 1 cut(s) | 1227 |
| Bbv12I | GWGCWC | 2 cut(s) | 222, 447 |
| BbvI | GCAGC | 1 cut(s) | 492 |
| BccI | CCATC | 3 cut(s) | 81, 856, 1120 |
| BceAI | ACGGC | 4 cut(s) | 422, 562, 571, 721 |
| BciT130I | CCWGG | 2 cut(s) | 212, 553 |
| BciVI | GTATCC | 1 cut(s) | 641 |
| BcoDI | GTCTC | 2 cut(s) | 109, 971 |
| BfaI | CTAG | 3 cut(s) | 630, 1209, 1268 |
| BfmI | CTRYAG | 2 cut(s) | 160, 1173 |
| BfuI | GTATCC | 1 cut(s) | 641 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 212 |
| BglII | AGATCT | 1 cut(s) | 1096 |
| BisI | GCNGC | 2 cut(s) | 268, 506 |
| BlsI | GCNGC | 2 cut(s) | 269, 507 |
| Bme1390I | CCNGG | 2 cut(s) | 212, 553 |
| Bme18I | GGWCC | 4 cut(s) | 285, 306, 492, 865 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 774 |
| BmgBI | CACGTC | 1 cut(s) | 262 |
| BmgT120I | GGNCC | 4 cut(s) | 285, 306, 492, 865 |
| BmiI | GGNNCC | 3 cut(s) | 308, 493, 849 |
| BmrFI | CCNGG | 2 cut(s) | 212, 553 |
| BmrI | ACTGGG | 1 cut(s) | 77 |
| BmsI | GCATC | 3 cut(s) | 424, 522, 843 |
| BmuI | ACTGGG | 1 cut(s) | 77 |
| BpiI | GAAGAC | 1 cut(s) | 1227 |
| BpuEI | CTTGAG | 1 cut(s) | 996 |
| BsaHI | GRCGYC | 1 cut(s) | 183 |
| BsaJI | CCNNGG | 2 cut(s) | 299, 551 |
| BsaWI | WCCGGW | 3 cut(s) | 567, 867, 1198 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 233, 263, 968, 998 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 229, 300, 391, 481, 501, 1198 |
| Bse1I | ACTGG | 2 cut(s) | 12, 83 |
| BseBI | CCWGG | 2 cut(s) | 212, 553 |
| BseDI | CCNNGG | 2 cut(s) | 299, 551 |
| BseGI | GGATG | 5 cut(s) | 73, 92, 243, 733, 1264 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 229, 300, 391, 481, 501, 1198 |
| BseMII | CTCAG | 1 cut(s) | 692 |
| BseNI | ACTGG | 2 cut(s) | 12, 83 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BseX3I | CGGCCG | 1 cut(s) | 265 |
| BseXI | GCAGC | 1 cut(s) | 492 |
| BseYI | CCCAGC | 2 cut(s) | 186, 643 |
| Bsh1236I | CGCG | 4 cut(s) | 102, 539, 772, 1149 |
| Bsh1285I | CGRYCG | 1 cut(s) | 268 |
| BshFI | GGCC | 3 cut(s) | 215, 267, 1027 |
| BshNI | GGYRCC | 1 cut(s) | 847 |
| BsiEI | CGRYCG | 1 cut(s) | 268 |
| BsiHKAI | GWGCWC | 2 cut(s) | 222, 447 |
| BsiSI | CCGG | 5 cut(s) | 227, 568, 857, 868, 1199 |
| BslFI | GGGAC | 3 cut(s) | 292, 534, 617 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 229, 300, 391, 481, 501, 1198 |
| BsmAI | GTCTC | 2 cut(s) | 109, 971 |
| BsmBI | CGTCTC | 1 cut(s) | 109 |
| BsmFI | GGGAC | 3 cut(s) | 292, 534, 617 |
| BsmI | GAATGC | 1 cut(s) | 715 |
| BsnI | GGCC | 3 cut(s) | 215, 267, 1027 |
| Bsp1286I | GDGCHC | 2 cut(s) | 222, 447 |
| Bsp143I | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| Bsp19I | CCATGG | 1 cut(s) | 299 |
| BspANI | GGCC | 3 cut(s) | 215, 267, 1027 |
| BspCNI | CTCAG | 1 cut(s) | 693 |
| BspFNI | CGCG | 4 cut(s) | 102, 539, 772, 1149 |
| BspHI | TCATGA | 2 cut(s) | 661, 778 |
| BspLI | GGNNCC | 3 cut(s) | 308, 493, 849 |
| BspMAI | CTGCAG | 1 cut(s) | 164 |
| BspPI | GGATC | 3 cut(s) | 600, 757, 795 |
| BspT107I | GGYRCC | 1 cut(s) | 847 |
| BsrBI | CCGCTC | 1 cut(s) | 457 |
| BsrI | ACTGG | 2 cut(s) | 12, 83 |
| BssECI | CCNNGG | 2 cut(s) | 299, 551 |
| BssMI | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| BssNI | GRCGYC | 1 cut(s) | 183 |
| BssT1I | CCWWGG | 1 cut(s) | 299 |
| Bst2UI | CCWGG | 2 cut(s) | 212, 553 |
| Bst4CI | ACNGT | 2 cut(s) | 963, 1000 |
| Bst6I | CTCTTC | 1 cut(s) | 1247 |
| BstACI | GRCGYC | 1 cut(s) | 183 |
| BstDEI | CTNAG | 2 cut(s) | 701, 1029 |
| BstDSI | CCRYGG | 1 cut(s) | 299 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 389 |
| BstF5I | GGATG | 5 cut(s) | 73, 92, 243, 733, 1264 |
| BstFNI | CGCG | 4 cut(s) | 102, 539, 772, 1149 |
| BstKTI | GATC | 4 cut(s) | 595, 752, 790, 1099 |
| BstMAI | GTCTC | 2 cut(s) | 109, 971 |
| BstMBI | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| BstMCI | CGRYCG | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 212, 583, 742 |
| BstNI | CCWGG | 2 cut(s) | 212, 553 |
| BstNSI | RCATGY | 1 cut(s) | 736 |
| BstSCI | CCNGG | 2 cut(s) | 210, 551 |
| BstSFI | CTRYAG | 2 cut(s) | 160, 1173 |
| BstUI | CGCG | 4 cut(s) | 102, 539, 772, 1149 |
| BstV1I | GCAGC | 1 cut(s) | 492 |
| BstV2I | GAAGAC | 1 cut(s) | 1227 |
| BstX2I | RGATCY | 2 cut(s) | 749, 1096 |
| BstYI | RGATCY | 2 cut(s) | 749, 1096 |
| BstZI | CGGCCG | 1 cut(s) | 265 |
| BsuI | GTATCC | 1 cut(s) | 641 |
| BsuRI | GGCC | 3 cut(s) | 215, 267, 1027 |
| BtgI | CCRYGG | 1 cut(s) | 299 |
| BtgZI | GCGATG | 1 cut(s) | 520 |
| BtrI | CACGTC | 1 cut(s) | 262 |
| BtsCI | GGATG | 5 cut(s) | 73, 92, 243, 733, 1264 |
| CciI | TCATGA | 2 cut(s) | 661, 778 |
| Cfr13I | GGNCC | 4 cut(s) | 285, 306, 492, 865 |
| CseI | GACGC | 4 cut(s) | 91, 191, 400, 778 |
| Csp6I | GTAC | 2 cut(s) | 86, 565 |
| CviAII | CATG | 6 cut(s) | 300, 460, 662, 733, 779, 1091 |
| CviQI | GTAC | 2 cut(s) | 86, 565 |
| DdeI | CTNAG | 2 cut(s) | 701, 1029 |
| DpnI | GATC | 4 cut(s) | 594, 751, 789, 1098 |
| DpnII | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| DriI | GACNNNNNGTC | 1 cut(s) | 774 |
| EaeI | YGGCCR | 2 cut(s) | 213, 265 |
| EagI | CGGCCG | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 1 cut(s) | 1247 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 774 |
| EarI | CTCTTC | 1 cut(s) | 1247 |
| EciI | GGCGGA | 1 cut(s) | 542 |
| Ecl136II | GAGCTC | 2 cut(s) | 220, 445 |
| EclXI | CGGCCG | 1 cut(s) | 265 |
| Eco130I | CCWWGG | 1 cut(s) | 299 |
| Eco147I | AGGCCT | 1 cut(s) | 1027 |
| Eco24I | GRGCYC | 2 cut(s) | 222, 447 |
| Eco47I | GGWCC | 4 cut(s) | 285, 306, 492, 865 |
| Eco52I | CGGCCG | 1 cut(s) | 265 |
| Eco53kI | GAGCTC | 2 cut(s) | 220, 445 |
| EcoICRI | GAGCTC | 2 cut(s) | 220, 445 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 389 |
| EcoO109I | RGGNCCY | 1 cut(s) | 492 |
| EcoRII | CCWGG | 2 cut(s) | 210, 551 |
| EcoT14I | CCWWGG | 1 cut(s) | 299 |
| EcoT38I | GRGCYC | 2 cut(s) | 222, 447 |
| ErhI | CCWWGG | 1 cut(s) | 299 |
| Esp3I | CGTCTC | 1 cut(s) | 109 |
| FaeI | CATG | 6 cut(s) | 303, 463, 665, 736, 782, 1094 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 891, 923 |
| FaqI | GGGAC | 3 cut(s) | 292, 534, 617 |
| FatI | CATG | 6 cut(s) | 299, 459, 661, 732, 778, 1090 |
| FauI | CCCGC | 4 cut(s) | 231, 260, 462, 802 |
| FblI | GTMKAC | 1 cut(s) | 1066 |
| Fnu4HI | GCNGC | 2 cut(s) | 268, 506 |
| FokI | GGATG | 5 cut(s) | 60, 79, 230, 740, 1271 |
| FriOI | GRGCYC | 2 cut(s) | 222, 447 |
| Fsp4HI | GCNGC | 2 cut(s) | 268, 506 |
| FspBI | CTAG | 3 cut(s) | 630, 1209, 1268 |
| GluI | GCNGC | 2 cut(s) | 268, 506 |
| GsaI | CCCAGC | 2 cut(s) | 190, 647 |
| HaeIII | GGCC | 3 cut(s) | 215, 267, 1027 |
| HapII | CCGG | 5 cut(s) | 227, 568, 857, 868, 1199 |
| HgaI | GACGC | 4 cut(s) | 91, 191, 400, 778 |
| Hin1I | GRCGYC | 1 cut(s) | 183 |
| Hin1II | CATG | 6 cut(s) | 303, 463, 665, 736, 782, 1094 |
| HincII | GTYRAC | 2 cut(s) | 1067, 1204 |
| HindII | GTYRAC | 2 cut(s) | 1067, 1204 |
| HinfI | GANTC | 8 cut(s) | 395, 422, 547, 571, 653, 775, 1060, 1144 |
| HpaII | CCGG | 5 cut(s) | 227, 568, 857, 868, 1199 |
| HphI | GGTGA | 3 cut(s) | 443, 697, 778 |
| Hpy166II | GTNNAC | 5 cut(s) | 637, 996, 1067, 1204, 1214 |
| Hpy188I | TCNGA | 5 cut(s) | 400, 592, 702, 879, 1125 |
| Hpy188III | TCNNGA | 2 cut(s) | 662, 779 |
| Hpy8I | GTNNAC | 5 cut(s) | 637, 996, 1067, 1204, 1214 |
| Hpy99I | CGWCG | 6 cut(s) | 266, 293, 416, 443, 592, 1068 |
| HpyAV | CCTTC | 7 cut(s) | 79, 217, 356, 823, 893, 1017, 1268 |
| HpyCH4III | ACNGT | 2 cut(s) | 963, 1000 |
| HpyCH4IV | ACGT | 2 cut(s) | 261, 522 |
| HpyCH4V | TGCA | 6 cut(s) | 162, 498, 513, 519, 757, 912 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 212, 583, 742 |
| HpyF3I | CTNAG | 2 cut(s) | 701, 1029 |
| HpySE526I | ACGT | 2 cut(s) | 261, 522 |
| Hsp92I | GRCGYC | 1 cut(s) | 183 |
| Hsp92II | CATG | 6 cut(s) | 303, 463, 665, 736, 782, 1094 |
| Kzo9I | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| LmnI | GCTCC | 2 cut(s) | 225, 326 |
| Lsp1109I | GCAGC | 1 cut(s) | 492 |
| LweI | GCATC | 3 cut(s) | 424, 522, 843 |
| MaeI | CTAG | 3 cut(s) | 630, 1209, 1268 |
| MaeII | ACGT | 2 cut(s) | 261, 522 |
| MaeIII | GTNAC | 2 cut(s) | 464, 766 |
| MalI | GATC | 4 cut(s) | 594, 751, 789, 1098 |
| MbiI | CCGCTC | 1 cut(s) | 457 |
| MboI | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| MboII | GAAGA | 6 cut(s) | 26, 177, 941, 1106, 1232, 1264 |
| MflI | RGATCY | 2 cut(s) | 749, 1096 |
| MhlI | GDGCHC | 2 cut(s) | 222, 447 |
| MluCI | AATT | 6 cut(s) | 52, 477, 674, 989, 1137, 1283 |
| MluI | ACGCGT | 1 cut(s) | 100 |
| MlyI | GAGTC | 4 cut(s) | 389, 556, 647, 784 |
| MmeI | TCCRAC | 3 cut(s) | 163, 423, 570 |
| MseI | TTAA | 5 cut(s) | 39, 558, 972, 1038, 1140 |
| MspI | CCGG | 5 cut(s) | 227, 568, 857, 868, 1199 |
| MspR9I | CCNGG | 2 cut(s) | 212, 553 |
| Mva1269I | GAATGC | 1 cut(s) | 715 |
| MvaI | CCWGG | 2 cut(s) | 212, 553 |
| MvnI | CGCG | 4 cut(s) | 102, 539, 772, 1149 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 212, 583, 742 |
| NcoI | CCATGG | 1 cut(s) | 299 |
| NdeII | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| NlaIII | CATG | 6 cut(s) | 303, 463, 665, 736, 782, 1094 |
| NlaIV | GGNNCC | 3 cut(s) | 308, 493, 849 |
| NmeAIII | GCCGAG | 1 cut(s) | 241 |
| NmuCI | GTSAC | 1 cut(s) | 766 |
| NspI | RCATGY | 1 cut(s) | 736 |
| PagI | TCATGA | 2 cut(s) | 661, 778 |
| PceI | AGGCCT | 1 cut(s) | 1027 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 438 |
| PctI | GAATGC | 1 cut(s) | 715 |
| PfeI | GAWTC | 4 cut(s) | 422, 571, 1060, 1144 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 300 |
| PkrI | GCNGC | 2 cut(s) | 269, 507 |
| PleI | GAGTC | 4 cut(s) | 389, 555, 647, 783 |
| PpsI | GAGTC | 4 cut(s) | 389, 555, 647, 783 |
| PpuMI | RGGWCCY | 1 cut(s) | 492 |
| PshBI | ATTAAT | 1 cut(s) | 39 |
| Psp124BI | GAGCTC | 2 cut(s) | 222, 447 |
| Psp5II | RGGWCCY | 1 cut(s) | 492 |
| Psp6I | CCWGG | 2 cut(s) | 210, 551 |
| PspFI | CCCAGC | 2 cut(s) | 186, 643 |
| PspGI | CCWGG | 2 cut(s) | 210, 551 |
| PspN4I | GGNNCC | 3 cut(s) | 308, 493, 849 |
| PspPI | GGNCC | 4 cut(s) | 285, 306, 492, 865 |
| PspPPI | RGGWCCY | 1 cut(s) | 492 |
| PstI | CTGCAG | 1 cut(s) | 164 |
| PsuI | RGATCY | 2 cut(s) | 749, 1096 |
| RsaI | GTAC | 2 cut(s) | 87, 566 |
| RsaNI | GTAC | 2 cut(s) | 86, 565 |
| SacI | GAGCTC | 2 cut(s) | 222, 447 |
| SalI | GTCGAC | 1 cut(s) | 1065 |
| SaqAI | TTAA | 5 cut(s) | 39, 558, 972, 1038, 1140 |
| SatI | GCNGC | 2 cut(s) | 268, 506 |
| Sau3AI | GATC | 4 cut(s) | 592, 749, 787, 1096 |
| Sau96I | GGNCC | 4 cut(s) | 285, 306, 492, 865 |
| SchI | GAGTC | 4 cut(s) | 389, 556, 647, 784 |
| ScrFI | CCNGG | 2 cut(s) | 212, 553 |
| SduI | GDGCHC | 2 cut(s) | 222, 447 |
| SfaNI | GCATC | 3 cut(s) | 424, 522, 843 |
| SfcI | CTRYAG | 2 cut(s) | 160, 1173 |
| SinI | GGWCC | 4 cut(s) | 285, 306, 492, 865 |
| SmlI | CTYRAG | 1 cut(s) | 1011 |
| SmoI | CTYRAG | 1 cut(s) | 1011 |
| Sse9I | AATT | 6 cut(s) | 52, 477, 674, 989, 1137, 1283 |
| SseBI | AGGCCT | 1 cut(s) | 1027 |
| SspI | AATATT | 1 cut(s) | 37 |
| SspMI | CTAG | 3 cut(s) | 630, 1209, 1268 |
| SstI | GAGCTC | 2 cut(s) | 222, 447 |
| StuI | AGGCCT | 1 cut(s) | 1027 |
| StyD4I | CCNGG | 2 cut(s) | 210, 551 |
| StyI | CCWWGG | 1 cut(s) | 299 |
| TaaI | ACNGT | 2 cut(s) | 963, 1000 |
| TaiI | ACGT | 2 cut(s) | 264, 525 |
| TaqI | TCGA | 6 cut(s) | 315, 414, 420, 441, 595, 1066 |
| TasI | AATT | 6 cut(s) | 52, 477, 674, 989, 1137, 1283 |
| TauI | GCSGC | 1 cut(s) | 270 |
| TfiI | GAWTC | 4 cut(s) | 422, 571, 1060, 1144 |
| Tru1I | TTAA | 5 cut(s) | 39, 558, 972, 1038, 1140 |
| Tru9I | TTAA | 5 cut(s) | 39, 558, 972, 1038, 1140 |
| TseFI | GTSAC | 1 cut(s) | 766 |
| TseI | GCWGC | 1 cut(s) | 505 |
| Tsp45I | GTSAC | 1 cut(s) | 766 |
| TspDTI | ATGAA | 7 cut(s) | 168, 338, 650, 722, 795, 942, 1107 |
| TspGWI | ACGGA | 4 cut(s) | 46, 277, 377, 646 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 300 |
| VpaK11BI | GGWCC | 4 cut(s) | 285, 306, 492, 865 |
| VspI | ATTAAT | 1 cut(s) | 39 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 389 |
| XceI | RCATGY | 1 cut(s) | 736 |
| XmiI | GTMKAC | 1 cut(s) | 1066 |
| XspI | CTAG | 3 cut(s) | 630, 1209, 1268 |