Squalene epoxidase 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0127211 RchiOBHm_Chr2g0139521 RchiOBHm_Chr4g0426021 RchiOBHm_Chr7g0215691 |
| rosa_laevigata | RLG00000013555 RLG00000022625 RLG00000025917 RLG00000026011 RLG00000031338 RLG00000035292 |
| rosa_roxburghii | Rroxscaffold_1G00061270 Rroxscaffold_2G00080310 Rroxscaffold_5G00368020 Rroxscaffold_7G00185710 Rroxscaffold_7G00209630 |
| rosa_rugosa | Rorug05G0481000 Rorug06G0001200 |
| rosa_samantha | Rh2BG287200 Rh3CG326000 Rh4DG038400 Rh4DG214600 Rh5AG514800 Rh6BG109200 Rh6BG184600 Rh6BG190000 Rh6CG109500 Rh6CG109600 Rh6CG262000 Rh6DG099200 Rh7BG146700 Rh7CG407100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 171, 197, 223 |
| AccI | GTMKAC | 1 cut(s) | 249 |
| AciI | CCGC | 1 cut(s) | 26 |
| AclWI | GGATC | 1 cut(s) | 56 |
| AcsI | RAATTY | 1 cut(s) | 279 |
| AjiI | CACGTC | 1 cut(s) | 241 |
| AluBI | AGCT | 1 cut(s) | 292 |
| AluI | AGCT | 1 cut(s) | 292 |
| Alw26I | GTCTC | 1 cut(s) | 252 |
| AlwI | GGATC | 1 cut(s) | 56 |
| ApeKI | GCWGC | 1 cut(s) | 298 |
| ApoI | RAATTY | 1 cut(s) | 279 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 278 |
| BanI | GGYRCC | 3 cut(s) | 171, 197, 223 |
| BbvI | GCAGC | 1 cut(s) | 310 |
| BcoDI | GTCTC | 1 cut(s) | 252 |
| BfmI | CTRYAG | 1 cut(s) | 303 |
| BisI | GCNGC | 1 cut(s) | 299 |
| BlpI | GCTNAGC | 1 cut(s) | 48 |
| BlsI | GCNGC | 1 cut(s) | 300 |
| BmgBI | CACGTC | 1 cut(s) | 241 |
| BmiI | GGNNCC | 4 cut(s) | 173, 199, 225, 343 |
| BmsI | GCATC | 1 cut(s) | 224 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 48 |
| BpuEI | CTTGAG | 1 cut(s) | 356 |
| Bse1I | ACTGG | 2 cut(s) | 175, 201 |
| BseGI | GGATG | 2 cut(s) | 83, 239 |
| BseMII | CTCAG | 1 cut(s) | 39 |
| BseNI | ACTGG | 2 cut(s) | 175, 201 |
| BseRI | GAGGAG | 1 cut(s) | 45 |
| BseXI | GCAGC | 1 cut(s) | 310 |
| BsgI | GTGCAG | 1 cut(s) | 148 |
| BshNI | GGYRCC | 3 cut(s) | 171, 197, 223 |
| BsmAI | GTCTC | 1 cut(s) | 252 |
| Bsp143I | GATC | 1 cut(s) | 61 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 48 |
| BspACI | CCGC | 1 cut(s) | 26 |
| BspCNI | CTCAG | 1 cut(s) | 40 |
| BspLI | GGNNCC | 4 cut(s) | 173, 199, 225, 343 |
| BspMAI | CTGCAG | 1 cut(s) | 307 |
| BspPI | GGATC | 1 cut(s) | 56 |
| BspT107I | GGYRCC | 3 cut(s) | 171, 197, 223 |
| BsrI | ACTGG | 2 cut(s) | 175, 201 |
| BssMI | GATC | 1 cut(s) | 61 |
| BstC8I | GCNNGC | 1 cut(s) | 303 |
| BstDEI | CTNAG | 2 cut(s) | 48, 353 |
| BstF5I | GGATG | 2 cut(s) | 83, 239 |
| BstKTI | GATC | 1 cut(s) | 64 |
| BstMAI | GTCTC | 1 cut(s) | 252 |
| BstMBI | GATC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 298 |
| BstSFI | CTRYAG | 1 cut(s) | 303 |
| BstV1I | GCAGC | 1 cut(s) | 310 |
| BstX2I | RGATCY | 1 cut(s) | 61 |
| BstYI | RGATCY | 1 cut(s) | 61 |
| BtrI | CACGTC | 1 cut(s) | 241 |
| BtsCI | GGATG | 2 cut(s) | 83, 239 |
| Cac8I | GCNNGC | 1 cut(s) | 303 |
| CviAII | CATG | 1 cut(s) | 245 |
| CviJI | RGCY | 5 cut(s) | 47, 52, 271, 292, 301 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 52, 271, 292, 301 |
| DdeI | CTNAG | 2 cut(s) | 48, 353 |
| DpnI | GATC | 1 cut(s) | 63 |
| DpnII | GATC | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 248 |
| FaiI | YATR | 5 cut(s) | 155, 157, 180, 206, 246 |
| FatI | CATG | 1 cut(s) | 244 |
| FauI | CCCGC | 1 cut(s) | 19 |
| FblI | GTMKAC | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 1 cut(s) | 299 |
| FokI | GGATG | 2 cut(s) | 70, 246 |
| Fsp4HI | GCNGC | 1 cut(s) | 299 |
| GluI | GCNGC | 1 cut(s) | 299 |
| Hin1II | CATG | 1 cut(s) | 248 |
| HincII | GTYRAC | 1 cut(s) | 250 |
| HindII | GTYRAC | 1 cut(s) | 250 |
| HphI | GGTGA | 2 cut(s) | 16, 278 |
| Hpy166II | GTNNAC | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 1 cut(s) | 315 |
| Hpy188III | TCNNGA | 3 cut(s) | 13, 286, 335 |
| Hpy8I | GTNNAC | 1 cut(s) | 250 |
| HpyAV | CCTTC | 2 cut(s) | 137, 224 |
| HpyCH4IV | ACGT | 1 cut(s) | 240 |
| HpyCH4V | TGCA | 3 cut(s) | 129, 298, 305 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 298 |
| HpyF3I | CTNAG | 2 cut(s) | 48, 353 |
| HpySE526I | ACGT | 1 cut(s) | 240 |
| Hsp92II | CATG | 1 cut(s) | 248 |
| Kzo9I | GATC | 1 cut(s) | 61 |
| LmnI | GCTCC | 2 cut(s) | 182, 208 |
| Lsp1109I | GCAGC | 1 cut(s) | 310 |
| LweI | GCATC | 1 cut(s) | 224 |
| MaeII | ACGT | 1 cut(s) | 240 |
| MaeIII | GTNAC | 1 cut(s) | 79 |
| MalI | GATC | 1 cut(s) | 63 |
| MboI | GATC | 1 cut(s) | 61 |
| MfeI | CAATTG | 1 cut(s) | 75 |
| MflI | RGATCY | 1 cut(s) | 61 |
| MluCI | AATT | 3 cut(s) | 75, 279, 317 |
| MnlI | CCTC | 3 cut(s) | 23, 75, 331 |
| MslI | CAYNNNNRTG | 3 cut(s) | 177, 203, 243 |
| MunI | CAATTG | 1 cut(s) | 75 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 298 |
| NdeII | GATC | 1 cut(s) | 61 |
| NlaIII | CATG | 1 cut(s) | 248 |
| NlaIV | GGNNCC | 4 cut(s) | 173, 199, 225, 343 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 246 |
| PkrI | GCNGC | 1 cut(s) | 300 |
| PspN4I | GGNNCC | 4 cut(s) | 173, 199, 225, 343 |
| PstI | CTGCAG | 1 cut(s) | 307 |
| PsuI | RGATCY | 1 cut(s) | 61 |
| RseI | CAYNNNNRTG | 3 cut(s) | 177, 203, 243 |
| SalI | GTCGAC | 1 cut(s) | 248 |
| SatI | GCNGC | 1 cut(s) | 299 |
| Sau3AI | GATC | 1 cut(s) | 61 |
| SetI | ASST | 3 cut(s) | 123, 243, 294 |
| SfaNI | GCATC | 1 cut(s) | 224 |
| SfcI | CTRYAG | 1 cut(s) | 303 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 177, 203, 243 |
| SmlI | CTYRAG | 1 cut(s) | 335 |
| SmoI | CTYRAG | 1 cut(s) | 335 |
| Sse9I | AATT | 3 cut(s) | 75, 279, 317 |
| SsiI | CCGC | 1 cut(s) | 26 |
| TaiI | ACGT | 1 cut(s) | 243 |
| TaqI | TCGA | 1 cut(s) | 249 |
| TasI | AATT | 3 cut(s) | 75, 279, 317 |
| TseI | GCWGC | 1 cut(s) | 298 |
| XapI | RAATTY | 1 cut(s) | 279 |
| XmiI | GTMKAC | 1 cut(s) | 249 |