RLG00000031759

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0014719
Physical Location & Seq
Forward (+)
8056995 .. 8063233
6239 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031759

Sequence Viewer

Length: 1047 bp
ATGGTTTTTCAAGTAAAAACTCTTGAACTAATATCATGCGTTGTCTTGATAGGATGTTTAGCAGTGTCTAAAGCCTCGTCGCGAGCATTACTTTTTGAAGCTAATGATTCCATGAATATTTTGCAAGCATTTGAGAACTGGATGAAAGAGCATGGACGCACTTACTCAAGCAGTGAGGAGAAGGCAAAGCGTTTTGCAATATTCAAGGAGGAGTTTGATCATATAGAAAACTTCAACAGCCAAGGGAAACATAGATTCACATTAGGCCTCAATGCATTCAGTGATCTGACTGATAAAGAGTTTGATGAGACATATGGTTGCACGACTGCTATACCAAACACAAACCCTAGCTCAGTCTCTTCTTTTAGCTATCAAGATTTTGAAATTGAGGATCTTCCCCAAAACTGGGACTGGAGGACACAAGGAGCTGTGACCACTGTCAAGGACCAAGGAAAATGTGGTTGTGGTTGGGCTTTTGCAATAGCAGCAGCAGTGGAAGGCCTCACCCCATTCTACAATAAACCTTATGGAAAACTTGTAGCCTGTAGTAGGCCGTATGGCACCAATGGCTGTAAAGGGGGTCAAGCGATTAATGCTATCAAGTACGTAAGGGATCATGGACTCGTAACTGAAGAAAAGTTTCCTTACCGCTTTGCTGACGACCAATCATGCGACACCGCGTTCGAATCTTCCCCTGATATAAAAATCTCTGGTTATGAAGCTGTGCCTGAGTTTGATGAAGTTGCTCTAGCCAAGGCTGTTTACCATCAACCAGTTGTAGTTGCGCATTCCGCCAGCATTAATTTTCGCCGATACAAAGGTGGTATTTTTATAGATGCAGATGGGAAGTGTGCTAGAGGTAATATCAGCCACACTTCTACACTCGTTGGCTTCGGTACAACTCCACTTGGCGAAGAATATTGGATACTGAAGAATTCATGGAGCTCTTCTTGGGGTGAACATGGTTATATGAAAATTAATAGAAATAGTAAGAATAAGAGAGGTGTTTGTAACCTCGCAAAATTGCCAGTATTCGCCATTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04145 ko04210 ko04612 ko04621 ko04924 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map04621 map04924 map05205 map05323 map05418
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

349

Amino Acids

38.71

Weight (kDa)

6.27

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 44 - 101 2e-20 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 132 - 343 2.2e-54 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 786
AccB1I GGYRCC 1 cut(s) 560
AccII CGCG 2 cut(s) 82, 680
AciI CCGC 3 cut(s) 649, 678, 792
AclWI GGATC 2 cut(s) 399, 621
AcsI RAATTY 1 cut(s) 934
AcuI CTGAAG 2 cut(s) 651, 950
AfaI GTAC 2 cut(s) 605, 898
AfiI CCNNNNNNNGG 3 cut(s) 405, 406, 549
AgsI TTSAA 6 cut(s) 11, 26, 98, 205, 235, 383
AluBI AGCT 6 cut(s) 101, 351, 369, 428, 722, 945
AluI AGCT 6 cut(s) 101, 351, 369, 428, 722, 945
Alw21I GWGCWC 1 cut(s) 947
Alw26I GTCTC 2 cut(s) 302, 361
AlwI GGATC 2 cut(s) 399, 621
AoxI GGCC 3 cut(s) 265, 499, 551
ApeKI GCWGC 2 cut(s) 485, 488
ApoI RAATTY 1 cut(s) 934
ArsI GACNNNNNNTTYG 2 cut(s) 665, 697
AseI ATTAAT 3 cut(s) 591, 801, 978
Asp700I GAANNNNTTC 1 cut(s) 639
AspLEI GCGC 1 cut(s) 787
AspS9I GGNCC 1 cut(s) 445
AsuHPI GGTGA 2 cut(s) 496, 968
AsuII TTCGAA 1 cut(s) 684
AvaII GGWCC 1 cut(s) 445
BaeI ACNNNNGTAYC 2 cut(s) 805, 838
BanI GGYRCC 1 cut(s) 560
BanII GRGCYC 1 cut(s) 947
Bbv12I GWGCWC 1 cut(s) 947
BbvI GCAGC 2 cut(s) 497, 500
BccI CCATC 2 cut(s) 774, 836
BceAI ACGGC 1 cut(s) 538
BciVI GTATCC 1 cut(s) 918
BclI TGATCA 1 cut(s) 217
BcoDI GTCTC 2 cut(s) 302, 361
BfaI CTAG 3 cut(s) 348, 749, 855
BfmI CTRYAG 1 cut(s) 544
BfuI GTATCC 1 cut(s) 918
BisI GCNGC 2 cut(s) 486, 489
BlsI GCNGC 2 cut(s) 487, 490
Bme18I GGWCC 1 cut(s) 445
BmgT120I GGNCC 1 cut(s) 445
BmiI GGNNCC 1 cut(s) 562
BmrI ACTGGG 1 cut(s) 415
BmsI GCATC 1 cut(s) 826
BmuI ACTGGG 1 cut(s) 415
BoxI GACNNNNGTC 1 cut(s) 437
BpmI CTGGAG 1 cut(s) 433
Bpu14I TTCGAA 1 cut(s) 684
BpuEI CTTGAG 1 cut(s) 151
BsaAI YACGTR 1 cut(s) 607
BsaJI CCNNGG 3 cut(s) 241, 448, 753
Bsc4I CCNNNNNNNGG 3 cut(s) 405, 406, 549
Bse1I ACTGG 5 cut(s) 143, 410, 416, 773, 1028
BseDI CCNNGG 3 cut(s) 241, 448, 753
BseGI GGATG 2 cut(s) 59, 147
BseLI CCNNNNNNNGG 3 cut(s) 405, 406, 549
BseMII CTCAG 2 cut(s) 366, 720
BseNI ACTGG 5 cut(s) 143, 410, 416, 773, 1028
BseRI GAGGAG 2 cut(s) 191, 224
BseXI GCAGC 2 cut(s) 497, 500
Bsh1236I CGCG 2 cut(s) 82, 680
BshFI GGCC 3 cut(s) 267, 501, 553
BshNI GGYRCC 1 cut(s) 560
BsiHKAI GWGCWC 1 cut(s) 947
BslFI GGGAC 1 cut(s) 422
BslI CCNNNNNNNGG 3 cut(s) 405, 406, 549
BsmAI GTCTC 2 cut(s) 302, 361
BsmFI GGGAC 1 cut(s) 422
BsmI GAATGC 2 cut(s) 275, 787
BsnI GGCC 3 cut(s) 267, 501, 553
Bsp119I TTCGAA 1 cut(s) 684
Bsp1286I GDGCHC 1 cut(s) 947
Bsp143I GATC 4 cut(s) 217, 283, 391, 613
Bsp68I TCGCGA 1 cut(s) 82
BspACI CCGC 3 cut(s) 649, 678, 792
BspANI GGCC 3 cut(s) 267, 501, 553
BspCNI CTCAG 2 cut(s) 365, 721
BspFNI CGCG 2 cut(s) 82, 680
BspLI GGNNCC 1 cut(s) 562
BspPI GGATC 2 cut(s) 399, 621
BspQI GCTCTTC 1 cut(s) 952
BspT104I TTCGAA 1 cut(s) 684
BspT107I GGYRCC 1 cut(s) 560
BsrI ACTGG 5 cut(s) 143, 410, 416, 773, 1028
BssECI CCNNGG 3 cut(s) 241, 448, 753
BssMI GATC 4 cut(s) 217, 283, 391, 613
BssT1I CCWWGG 3 cut(s) 241, 448, 753
Bst4CI ACNGT 1 cut(s) 439
Bst6I CTCTTC 2 cut(s) 364, 952
BstBAI YACGTR 1 cut(s) 607
BstBI TTCGAA 1 cut(s) 684
BstC8I GCNNGC 3 cut(s) 84, 126, 796
BstDEI CTNAG 2 cut(s) 352, 729
BstENI CCTNNNNNAGG 1 cut(s) 547
BstF5I GGATG 2 cut(s) 59, 147
BstFNI CGCG 2 cut(s) 82, 680
BstHHI GCGC 1 cut(s) 787
BstKTI GATC 4 cut(s) 220, 286, 394, 616
BstMAI GTCTC 2 cut(s) 302, 361
BstMBI GATC 4 cut(s) 217, 283, 391, 613
BstMWI GCNNNNNNNGC 4 cut(s) 485, 567, 593, 791
BstPAI GACNNNNGTC 1 cut(s) 437
BstSFI CTRYAG 1 cut(s) 544
BstSNI TACGTA 1 cut(s) 607
BstUI CGCG 2 cut(s) 82, 680
BstV1I GCAGC 2 cut(s) 497, 500
BstX2I RGATCY 1 cut(s) 391
BstYI RGATCY 1 cut(s) 391
BsuI GTATCC 1 cut(s) 918
BsuRI GGCC 3 cut(s) 267, 501, 553
BtsCI GGATG 2 cut(s) 59, 147
BtsI GCAGTG 3 cut(s) 69, 178, 498
BtsIMutI CAGTG 5 cut(s) 69, 178, 286, 435, 498
BtuMI TCGCGA 1 cut(s) 82
Cac8I GCNNGC 3 cut(s) 84, 126, 796
CfoI GCGC 1 cut(s) 787
Cfr13I GGNCC 1 cut(s) 445
CseI GACGC 1 cut(s) 165
Csp6I GTAC 2 cut(s) 604, 897
CviAII CATG 7 cut(s) 36, 112, 152, 617, 669, 939, 962
CviQI GTAC 2 cut(s) 604, 897
DdeI CTNAG 2 cut(s) 352, 729
DpnI GATC 4 cut(s) 219, 285, 393, 615
DpnII GATC 4 cut(s) 217, 283, 391, 613
Eam1104I CTCTTC 2 cut(s) 364, 952
EarI CTCTTC 2 cut(s) 364, 952
EciI GGCGGA 1 cut(s) 781
Ecl136II GAGCTC 1 cut(s) 945
Eco105I TACGTA 1 cut(s) 607
Eco130I CCWWGG 3 cut(s) 241, 448, 753
Eco147I AGGCCT 2 cut(s) 267, 501
Eco24I GRGCYC 1 cut(s) 947
Eco47I GGWCC 1 cut(s) 445
Eco53kI GAGCTC 1 cut(s) 945
Eco57I CTGAAG 2 cut(s) 651, 950
EcoICRI GAGCTC 1 cut(s) 945
EcoNI CCTNNNNNAGG 1 cut(s) 547
EcoRI GAATTC 1 cut(s) 934
EcoT14I CCWWGG 3 cut(s) 241, 448, 753
EcoT22I ATGCAT 1 cut(s) 277
EcoT38I GRGCYC 1 cut(s) 947
ErhI CCWWGG 3 cut(s) 241, 448, 753
FaeI CATG 7 cut(s) 39, 115, 155, 620, 672, 942, 965
FaqI GGGAC 1 cut(s) 422
FatI CATG 7 cut(s) 35, 111, 151, 616, 668, 938, 961
FauNDI CATATG 1 cut(s) 313
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 2 cut(s) 486, 489
FokI GGATG 2 cut(s) 66, 154
FriOI GRGCYC 1 cut(s) 947
Fsp4HI GCNGC 2 cut(s) 486, 489
FspBI CTAG 3 cut(s) 348, 749, 855
FspI TGCGCA 1 cut(s) 786
GlaI GCGC 1 cut(s) 786
GluI GCNGC 2 cut(s) 486, 489
GsuI CTGGAG 1 cut(s) 433
HaeIII GGCC 3 cut(s) 267, 501, 553
HgaI GACGC 1 cut(s) 165
HhaI GCGC 1 cut(s) 787
Hin1II CATG 7 cut(s) 39, 115, 155, 620, 672, 942, 965
Hin6I GCGC 1 cut(s) 785
HinP1I GCGC 1 cut(s) 785
HinfI GANTC 4 cut(s) 107, 255, 621, 686
HphI GGTGA 2 cut(s) 496, 968
Hpy166II GTNNAC 2 cut(s) 763, 959
Hpy188I TCNGA 1 cut(s) 288
Hpy188III TCNNGA 4 cut(s) 23, 46, 81, 374
Hpy8I GTNNAC 2 cut(s) 763, 959
Hpy99I CGWCG 1 cut(s) 82
HpyAV CCTTC 2 cut(s) 175, 491
HpyCH4III ACNGT 1 cut(s) 439
HpyCH4IV ACGT 1 cut(s) 606
HpyCH4V TGCA 6 cut(s) 124, 197, 275, 321, 479, 839
HpyF10VI GCNNNNNNNGC 4 cut(s) 485, 567, 593, 791
HpyF3I CTNAG 2 cut(s) 352, 729
HpySE526I ACGT 1 cut(s) 606
Hsp92II CATG 7 cut(s) 39, 115, 155, 620, 672, 942, 965
HspAI GCGC 1 cut(s) 785
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 4 cut(s) 217, 283, 391, 613
LguI GCTCTTC 1 cut(s) 952
LmnI GCTCC 2 cut(s) 425, 942
Lsp1109I GCAGC 2 cut(s) 497, 500
LweI GCATC 1 cut(s) 826
MaeI CTAG 3 cut(s) 348, 749, 855
MaeII ACGT 1 cut(s) 606
MaeIII GTNAC 3 cut(s) 430, 625, 1010
MalI GATC 4 cut(s) 219, 285, 393, 615
MboI GATC 4 cut(s) 217, 283, 391, 613
MboII GAAGA 7 cut(s) 351, 386, 644, 681, 926, 939, 943
MflI RGATCY 1 cut(s) 391
MhlI GDGCHC 1 cut(s) 947
MluCI AATT 5 cut(s) 384, 802, 934, 975, 1022
MlyI GAGTC 1 cut(s) 615
Mph1103I ATGCAT 1 cut(s) 277
MroXI GAANNNNTTC 1 cut(s) 639
MseI TTAA 3 cut(s) 591, 801, 978
Mva1269I GAATGC 2 cut(s) 275, 787
MvnI CGCG 2 cut(s) 82, 680
MwoI GCNNNNNNNGC 4 cut(s) 485, 567, 593, 791
NdeI CATATG 1 cut(s) 313
NdeII GATC 4 cut(s) 217, 283, 391, 613
NlaIII CATG 7 cut(s) 39, 115, 155, 620, 672, 942, 965
NlaIV GGNNCC 1 cut(s) 562
NmuCI GTSAC 1 cut(s) 430
NruI TCGCGA 1 cut(s) 82
NsbI TGCGCA 1 cut(s) 786
NsiI ATGCAT 1 cut(s) 277
NspV TTCGAA 1 cut(s) 684
PceI AGGCCT 2 cut(s) 267, 501
PciSI GCTCTTC 1 cut(s) 952
PctI GAATGC 2 cut(s) 275, 787
PdmI GAANNNNTTC 1 cut(s) 639
PfeI GAWTC 3 cut(s) 107, 255, 686
PkrI GCNGC 2 cut(s) 487, 490
PleI GAGTC 1 cut(s) 615
PpsI GAGTC 1 cut(s) 615
Ppu21I YACGTR 1 cut(s) 607
PshAI GACNNNNGTC 1 cut(s) 437
PshBI ATTAAT 3 cut(s) 591, 801, 978
Psp124BI GAGCTC 1 cut(s) 947
PspN4I GGNNCC 1 cut(s) 562
PspPI GGNCC 1 cut(s) 445
PsuI RGATCY 1 cut(s) 391
RruI TCGCGA 1 cut(s) 82
RsaI GTAC 2 cut(s) 605, 898
RsaNI GTAC 2 cut(s) 604, 897
SacI GAGCTC 1 cut(s) 947
SapI GCTCTTC 1 cut(s) 952
SaqAI TTAA 3 cut(s) 591, 801, 978
SatI GCNGC 2 cut(s) 486, 489
Sau3AI GATC 4 cut(s) 217, 283, 391, 613
Sau96I GGNCC 1 cut(s) 445
SchI GAGTC 1 cut(s) 615
SduI GDGCHC 1 cut(s) 947
SfaNI GCATC 1 cut(s) 826
SfcI CTRYAG 1 cut(s) 544
SfuI TTCGAA 1 cut(s) 684
SinI GGWCC 1 cut(s) 445
SmlI CTYRAG 1 cut(s) 166
SmoI CTYRAG 1 cut(s) 166
SnaBI TACGTA 1 cut(s) 607
Sse9I AATT 5 cut(s) 384, 802, 934, 975, 1022
SseBI AGGCCT 2 cut(s) 267, 501
SsiI CCGC 3 cut(s) 649, 678, 792
SspI AATATT 3 cut(s) 118, 201, 920
SspMI CTAG 3 cut(s) 348, 749, 855
SstI GAGCTC 1 cut(s) 947
StuI AGGCCT 2 cut(s) 267, 501
StyI CCWWGG 3 cut(s) 241, 448, 753
TaaI ACNGT 1 cut(s) 439
TaiI ACGT 1 cut(s) 609
TaqI TCGA 1 cut(s) 684
TasI AATT 5 cut(s) 384, 802, 934, 975, 1022
TfiI GAWTC 3 cut(s) 107, 255, 686
Tru1I TTAA 3 cut(s) 591, 801, 978
Tru9I TTAA 3 cut(s) 591, 801, 978
TscAI CASTG 5 cut(s) 69, 178, 286, 442, 498
TseFI GTSAC 1 cut(s) 430
TseI GCWGC 2 cut(s) 485, 488
Tsp45I GTSAC 1 cut(s) 430
TspDTI ATGAA 6 cut(s) 128, 158, 732, 753, 927, 986
TspRI CASTG 5 cut(s) 69, 178, 286, 442, 498
VpaK11BI GGWCC 1 cut(s) 445
VspI ATTAAT 3 cut(s) 591, 801, 978
XagI CCTNNNNNAGG 1 cut(s) 547
XapI RAATTY 1 cut(s) 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 455
XmnI GAANNNNTTC 1 cut(s) 639
XspI CTAG 3 cut(s) 348, 749, 855
Zsp2I ATGCAT 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.