Rmu_sc0021314.1_g000001

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021314.1
OG0014719
Physical Location & Seq
Forward (+)
1 .. 263
263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021314.1_g000001.1.cds

Sequence Viewer

Length: 263 bp
tcaccccattctacaataaaccttatggaaaacttgtgaacttgtccatgcaagaacttgtagcctgtagtaagccgtatggcaccaatggctgtaaagggggtcaagcgattaatgctatcaagtacgtaagggatcatggactcgtaactgaagaaaagtttccttaccggtttgctgacgaccaatcatgcgacaccgcgttcgaatcttcccctgatataaaaatctcagctgaggttgatgctagagcaacttcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04145 ko04210 ko04612 ko04621 ko04924 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map04621 map04924 map05205 map05323 map05418
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

86

Amino Acids

9.46

Weight (kDa)

5.69

Isoelectric Point (pI)

31.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 82
AccII CGCG 1 cut(s) 202
AciI CCGC 1 cut(s) 200
AclWI GGATC 1 cut(s) 143
AcuI CTGAAG 1 cut(s) 173
AfaI GTAC 1 cut(s) 127
AgeI ACCGGT 1 cut(s) 170
AluBI AGCT 1 cut(s) 235
AluI AGCT 1 cut(s) 235
AlwI GGATC 1 cut(s) 143
ArsI GACNNNNNNTTYG 2 cut(s) 187, 219
AseI ATTAAT 1 cut(s) 113
AsiGI ACCGGT 1 cut(s) 170
Asp700I GAANNNNTTC 1 cut(s) 161
AsuII TTCGAA 1 cut(s) 206
BanI GGYRCC 1 cut(s) 82
BbvCI CCTCAGC 1 cut(s) 236
BceAI ACGGC 1 cut(s) 60
BfaI CTAG 1 cut(s) 248
BfmI CTRYAG 1 cut(s) 66
BmiI GGNNCC 1 cut(s) 84
BmsI GCATC 1 cut(s) 234
Bpu10I CCTNAGC 1 cut(s) 236
Bpu14I TTCGAA 1 cut(s) 206
BsaAI YACGTR 1 cut(s) 129
BsaWI WCCGGW 1 cut(s) 170
Bse118I RCCGGY 1 cut(s) 170
BseMII CTCAG 2 cut(s) 227, 245
Bsh1236I CGCG 1 cut(s) 202
BshNI GGYRCC 1 cut(s) 82
BshTI ACCGGT 1 cut(s) 170
BsiSI CCGG 1 cut(s) 171
Bsp119I TTCGAA 1 cut(s) 206
Bsp143I GATC 1 cut(s) 135
BspACI CCGC 1 cut(s) 200
BspCNI CTCAG 2 cut(s) 228, 244
BspFNI CGCG 1 cut(s) 202
BspLI GGNNCC 1 cut(s) 84
BspPI GGATC 1 cut(s) 143
BspT104I TTCGAA 1 cut(s) 206
BspT107I GGYRCC 1 cut(s) 82
BsrFI RCCGGY 1 cut(s) 170
BssAI RCCGGY 1 cut(s) 170
BssMI GATC 1 cut(s) 135
BstBAI YACGTR 1 cut(s) 129
BstBI TTCGAA 1 cut(s) 206
BstDEI CTNAG 2 cut(s) 231, 236
BstFNI CGCG 1 cut(s) 202
BstKTI GATC 1 cut(s) 138
BstMBI GATC 1 cut(s) 135
BstMWI GCNNNNNNNGC 2 cut(s) 89, 115
BstSFI CTRYAG 1 cut(s) 66
BstSNI TACGTA 1 cut(s) 129
BstUI CGCG 1 cut(s) 202
Cfr10I RCCGGY 1 cut(s) 170
Csp6I GTAC 1 cut(s) 126
CspAI ACCGGT 1 cut(s) 170
CviAII CATG 3 cut(s) 48, 139, 191
CviJI RGCY 4 cut(s) 64, 75, 92, 235
CviKI_1 RGCY 4 cut(s) 64, 75, 92, 235
CviQI GTAC 1 cut(s) 126
DdeI CTNAG 2 cut(s) 231, 236
DpnI GATC 1 cut(s) 137
DpnII GATC 1 cut(s) 135
Eco105I TACGTA 1 cut(s) 129
Eco57I CTGAAG 1 cut(s) 173
FaeI CATG 3 cut(s) 51, 142, 194
FaiI YATR 7 cut(s) 26, 49, 80, 140, 192, 223, 261
FatI CATG 3 cut(s) 47, 138, 190
FspBI CTAG 1 cut(s) 248
HapII CCGG 1 cut(s) 171
Hin1II CATG 3 cut(s) 51, 142, 194
HinfI GANTC 2 cut(s) 143, 208
HpaII CCGG 1 cut(s) 171
Hpy166II GTNNAC 1 cut(s) 39
Hpy8I GTNNAC 1 cut(s) 39
HpyCH4IV ACGT 1 cut(s) 128
HpyCH4V TGCA 1 cut(s) 51
HpyF10VI GCNNNNNNNGC 2 cut(s) 89, 115
HpyF3I CTNAG 2 cut(s) 231, 236
HpySE526I ACGT 1 cut(s) 128
Hsp92II CATG 3 cut(s) 51, 142, 194
Kzo9I GATC 1 cut(s) 135
LpnPI CCDG 3 cut(s) 78, 184, 230
LweI GCATC 1 cut(s) 234
MaeI CTAG 1 cut(s) 248
MaeII ACGT 1 cut(s) 128
MaeIII GTNAC 1 cut(s) 147
MalI GATC 1 cut(s) 137
MboI GATC 1 cut(s) 135
MboII GAAGA 2 cut(s) 166, 203
MlyI GAGTC 1 cut(s) 137
MnlI CCTC 1 cut(s) 231
MroXI GAANNNNTTC 1 cut(s) 161
MseI TTAA 1 cut(s) 113
MspA1I CMGCKG 1 cut(s) 235
MspI CCGG 1 cut(s) 171
MvnI CGCG 1 cut(s) 202
MwoI GCNNNNNNNGC 2 cut(s) 89, 115
NdeII GATC 1 cut(s) 135
NlaIII CATG 3 cut(s) 51, 142, 194
NlaIV GGNNCC 1 cut(s) 84
NspV TTCGAA 1 cut(s) 206
PdmI GAANNNNTTC 1 cut(s) 161
PfeI GAWTC 1 cut(s) 208
PinAI ACCGGT 1 cut(s) 170
PleI GAGTC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 137
Ppu21I YACGTR 1 cut(s) 129
PshBI ATTAAT 1 cut(s) 113
PspN4I GGNNCC 1 cut(s) 84
PvuII CAGCTG 1 cut(s) 235
RsaI GTAC 1 cut(s) 127
RsaNI GTAC 1 cut(s) 126
SaqAI TTAA 1 cut(s) 113
Sau3AI GATC 1 cut(s) 135
SchI GAGTC 1 cut(s) 137
SetI ASST 4 cut(s) 24, 131, 237, 242
SfaNI GCATC 1 cut(s) 234
SfcI CTRYAG 1 cut(s) 66
SfuI TTCGAA 1 cut(s) 206
SnaBI TACGTA 1 cut(s) 129
SsiI CCGC 1 cut(s) 200
SspMI CTAG 1 cut(s) 248
TaiI ACGT 1 cut(s) 131
TaqI TCGA 1 cut(s) 206
TfiI GAWTC 1 cut(s) 208
Tru1I TTAA 1 cut(s) 113
Tru9I TTAA 1 cut(s) 113
TspDTI ATGAA 1 cut(s) 248
VspI ATTAAT 1 cut(s) 113
XmnI GAANNNNTTC 1 cut(s) 161
XspI CTAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.