Rmu_co8521115.1_g000001

Targeting protein for Xklp2 (TPX2)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8521115.1
Physical Location & Seq
Reverse (-)
3705 .. 6593
2889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8521115.1_g000001.1.cds

Sequence Viewer

Length: 1265 bp
ggaagaagatccgggagaggaaattcgtggtggcgaagaagagagggaagaaggaggagaatccgaatccgaatccgaattcgaacaccgagtgcagcaaatgcaaagagaaaggcggcgattcgaagaagaagtgtctgtgtgtggcttacgagaatctgagggcttctcaggaggagttcttcaagacccgacccgaacccgaaaacgggtcgaaggagtccgacagggctgatgatcgggaactcgaggaggccttgctgattcaggaccaggacttcgacgatcgcgacccgggcgagcccgacccgactgacgaaacgggtacgattaagaggaggagggcgaggctgttggaggaggcgaggaagagcgtgccggcgcgtgggaaggtgatgcacttggttcaggcgtttgagaagctgctcacgattcccaaggaaggagacgaagcagaggaagaagagagtggtaagaaggctacgaagtgggccttgcctgggctgcaaccgccggaggcccatgagtcttcgtcgtcgtcgttttgcccgtcggatttgtttctgacgtcggagaatctcgggctggatcgccggccgtcgttgtcgtcatcttgggatggaagcatttcgaacaggacgtcgaatggggggaggagaagccgaagaaatagctcggagtcgtctggcacgattggaggaagtagatggaaaaagaagcagcagctcagagcaactagccttaaaccattcaagctcaggacagaggaaagggggagaatgaagggagaagagttcatgaagaaggtacaggagatgatgatacaggaggagaggcagcggataccgattgctcagggcctgccatggacaacagatgaaccagagtgcttaataaaacctcctgtaaaagagagcacaagaccaacagacctgaagctccacactgacatgcgggcagtagagcgtgccgagtttgaccatcaggtggcagagaagctgagcctgtttgagcaatacaagatggaaagagagagactgcagaagttggcagaagaggaagaagtaagaaggctgagaaaggagcttgttccaaaagcacagccaatgccctactttgacaggcctttcattcccagaaggtcaatgaagcatccaactatacccaaagacccaaagttccatatccctcaacataagaagatcaagtgctgcttgtcatggaatgatgatatgagctcctactcttatcaaagtgaagcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

420

Amino Acids

48.53

Weight (kDa)

9.03

Isoelectric Point (pI)

65.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 571, 643
AccB7I CCANNNNNTGG 1 cut(s) 987
AccII CGCG 2 cut(s) 290, 384
AciI CCGC 4 cut(s) 116, 511, 840, 954
AclWI GGATC 2 cut(s) 3, 596
AcoI YGGCCR 1 cut(s) 595
AcsI RAATTY 2 cut(s) 22, 78
AcuI CTGAAG 1 cut(s) 955
AcyI GRCGYC 2 cut(s) 568, 640
AdeI CACNNNGTG 1 cut(s) 92
AfaI GTAC 2 cut(s) 327, 809
AfiI CCNNNNNNNGG 6 cut(s) 208, 209, 385, 442, 500, 987
AgsI TTSAA 2 cut(s) 186, 753
AjnI CCWGG 2 cut(s) 272, 498
AluBI AGCT 9 cut(s) 423, 674, 726, 756, 939, 999, 1086, 1238, 1261
AluI AGCT 9 cut(s) 423, 674, 726, 756, 939, 999, 1086, 1238, 1261
Alw21I GWGCWC 2 cut(s) 919, 1240
Alw26I GTCTC 2 cut(s) 440, 1029
AlwI GGATC 2 cut(s) 3, 596
AlwNI CAGNNNCTG 1 cut(s) 861
Ama87I CYCGRG 3 cut(s) 247, 294, 580
AoxI GGCC 6 cut(s) 254, 491, 518, 595, 858, 1123
ApeKI GCWGC 7 cut(s) 95, 423, 504, 720, 723, 837, 1211
ApoI RAATTY 2 cut(s) 22, 78
ArsI GACNNNNNNTTYG 4 cut(s) 262, 294, 625, 657
Asp700I GAANNNNTTC 1 cut(s) 627
AspLEI GCGC 1 cut(s) 384
AspS9I GGNCC 4 cut(s) 270, 491, 519, 858
AsuC2I CCSGG 3 cut(s) 13, 295, 296
AsuHPI GGTGA 1 cut(s) 405
AsuII TTCGAA 3 cut(s) 82, 124, 631
AvaI CYCGRG 3 cut(s) 247, 294, 580
AvaII GGWCC 1 cut(s) 270
BanII GRGCYC 2 cut(s) 305, 1240
BbsI GAAGAC 1 cut(s) 521
Bbv12I GWGCWC 2 cut(s) 919, 1240
BbvI GCAGC 7 cut(s) 107, 410, 491, 732, 735, 849, 1198
BccI CCATC 4 cut(s) 613, 701, 989, 1017
BceAI ACGGC 1 cut(s) 582
BciT130I CCWGG 2 cut(s) 274, 500
BciVI GTATCC 1 cut(s) 836
BcnI CCSGG 3 cut(s) 13, 295, 296
BcoDI GTCTC 2 cut(s) 440, 1029
BfaI CTAG 1 cut(s) 737
BfmI CTRYAG 1 cut(s) 1039
BfuI GTATCC 1 cut(s) 836
BisI GCNGC 8 cut(s) 96, 117, 424, 505, 721, 724, 838, 1212
BlpI GCTNAGC 1 cut(s) 1000
BlsI GCNGC 8 cut(s) 97, 118, 425, 506, 722, 725, 839, 1213
Bme1390I CCNGG 5 cut(s) 13, 274, 295, 296, 500
Bme18I GGWCC 1 cut(s) 270
BmeT110I CYCGRG 3 cut(s) 247, 294, 580
BmgT120I GGNCC 4 cut(s) 270, 491, 519, 858
BmrFI CCNGG 5 cut(s) 13, 274, 295, 296, 500
BmsI GCATC 2 cut(s) 386, 1161
BpiI GAAGAC 1 cut(s) 521
BplI GAGNNNNNCTC 2 cut(s) 153, 185
Bpu10I CCTNAGC 2 cut(s) 757, 854
Bpu1102I GCTNAGC 1 cut(s) 1000
Bpu14I TTCGAA 3 cut(s) 82, 124, 631
BpuMI CCSGG 3 cut(s) 13, 295, 296
BsaHI GRCGYC 2 cut(s) 568, 640
BsaJI CCNNGG 4 cut(s) 294, 437, 499, 865
Bsc4I CCNNNNNNNGG 6 cut(s) 208, 209, 385, 442, 500, 987
Bse118I RCCGGY 2 cut(s) 378, 593
BseBI CCWGG 2 cut(s) 274, 500
BseDI CCNNGG 4 cut(s) 294, 437, 499, 865
BseGI GGATG 2 cut(s) 624, 1152
BseLI CCNNNNNNNGG 6 cut(s) 208, 209, 385, 442, 500, 987
BseMII CTCAG 7 cut(s) 151, 184, 741, 771, 868, 991, 1066
BseRI GAGGAG 8 cut(s) 70, 190, 265, 351, 354, 373, 669, 844
BseX3I CGGCCG 1 cut(s) 595
BseXI GCAGC 7 cut(s) 107, 410, 491, 732, 735, 849, 1198
BsgI GTGCAG 1 cut(s) 114
Bsh1236I CGCG 2 cut(s) 290, 384
Bsh1285I CGRYCG 2 cut(s) 288, 598
BshFI GGCC 6 cut(s) 256, 493, 520, 597, 860, 1125
BsiEI CGRYCG 2 cut(s) 288, 598
BsiHKAI GWGCWC 2 cut(s) 919, 1240
BsiHKCI CYCGRG 3 cut(s) 247, 294, 580
BsiSI CCGG 5 cut(s) 12, 295, 379, 514, 594
BslI CCNNNNNNNGG 6 cut(s) 208, 209, 385, 442, 500, 987
BsmAI GTCTC 2 cut(s) 440, 1029
BsmBI CGTCTC 1 cut(s) 440
BsnI GGCC 6 cut(s) 256, 493, 520, 597, 860, 1125
BsoBI CYCGRG 3 cut(s) 247, 294, 580
Bsp119I TTCGAA 3 cut(s) 82, 124, 631
Bsp1286I GDGCHC 3 cut(s) 305, 919, 1240
Bsp143I GATC 5 cut(s) 8, 237, 285, 588, 1202
Bsp1720I GCTNAGC 1 cut(s) 1000
Bsp19I CCATGG 1 cut(s) 865
Bsp68I TCGCGA 1 cut(s) 290
BspACI CCGC 4 cut(s) 116, 511, 840, 954
BspANI GGCC 6 cut(s) 256, 493, 520, 597, 860, 1125
BspCNI CTCAG 7 cut(s) 152, 183, 740, 770, 867, 992, 1067
BspFNI CGCG 2 cut(s) 290, 384
BspHI TCATGA 1 cut(s) 797
BspMAI CTGCAG 1 cut(s) 1043
BspPI GGATC 2 cut(s) 3, 596
BspQI GCTCTTC 1 cut(s) 364
BspT104I TTCGAA 3 cut(s) 82, 124, 631
BsrFI RCCGGY 2 cut(s) 378, 593
BssAI RCCGGY 2 cut(s) 378, 593
BssECI CCNNGG 4 cut(s) 294, 437, 499, 865
BssMI GATC 5 cut(s) 8, 237, 285, 588, 1202
BssNI GRCGYC 2 cut(s) 568, 640
BssT1I CCWWGG 2 cut(s) 437, 865
Bst2UI CCWGG 2 cut(s) 274, 500
Bst6I CTCTTC 5 cut(s) 34, 364, 458, 785, 1049
BstACI GRCGYC 2 cut(s) 568, 640
BstAPI GCANNNNNTGC 1 cut(s) 101
BstBI TTCGAA 3 cut(s) 82, 124, 631
BstC8I GCNNGC 7 cut(s) 301, 376, 380, 595, 862, 956, 968
BstDEI CTNAG 7 cut(s) 160, 170, 727, 757, 854, 1000, 1075
BstDSI CCRYGG 1 cut(s) 865
BstF5I GGATG 2 cut(s) 624, 1152
BstFNI CGCG 2 cut(s) 290, 384
BstHHI GCGC 1 cut(s) 384
BstKTI GATC 5 cut(s) 11, 240, 288, 591, 1205
BstMAI GTCTC 2 cut(s) 440, 1029
BstMBI GATC 5 cut(s) 8, 237, 285, 588, 1202
BstMCI CGRYCG 2 cut(s) 288, 598
BstMWI GCNNNNNNNGC 4 cut(s) 101, 296, 504, 510
BstNI CCWGG 2 cut(s) 274, 500
BstNSI RCATGY 1 cut(s) 954
BstSCI CCNGG 5 cut(s) 11, 272, 293, 294, 498
BstSFI CTRYAG 1 cut(s) 1039
BstUI CGCG 2 cut(s) 290, 384
BstV1I GCAGC 7 cut(s) 107, 410, 491, 732, 735, 849, 1198
BstV2I GAAGAC 1 cut(s) 521
BstX2I RGATCY 1 cut(s) 8
BstYI RGATCY 1 cut(s) 8
BstZI CGGCCG 1 cut(s) 595
BsuI GTATCC 1 cut(s) 836
BsuRI GGCC 6 cut(s) 256, 493, 520, 597, 860, 1125
BtgI CCRYGG 1 cut(s) 865
BtsCI GGATG 2 cut(s) 624, 1152
BtsIMutI CAGTG 1 cut(s) 944
BtuMI TCGCGA 1 cut(s) 290
Cac8I GCNNGC 7 cut(s) 301, 376, 380, 595, 862, 956, 968
CaiI CAGNNNCTG 1 cut(s) 861
CciI TCATGA 1 cut(s) 797
CfoI GCGC 1 cut(s) 384
Cfr10I RCCGGY 2 cut(s) 378, 593
Cfr13I GGNCC 4 cut(s) 270, 491, 519, 858
Cfr9I CCCGGG 1 cut(s) 294
Csp6I GTAC 2 cut(s) 326, 808
CviAII CATG 5 cut(s) 523, 798, 866, 951, 1220
CviQI GTAC 2 cut(s) 326, 808
DdeI CTNAG 7 cut(s) 160, 170, 727, 757, 854, 1000, 1075
DpnI GATC 5 cut(s) 10, 239, 287, 590, 1204
DpnII GATC 5 cut(s) 8, 237, 285, 588, 1202
DraIII CACNNNGTG 1 cut(s) 92
EaeI YGGCCR 1 cut(s) 595
EagI CGGCCG 1 cut(s) 595
Eam1104I CTCTTC 5 cut(s) 34, 364, 458, 785, 1049
EarI CTCTTC 5 cut(s) 34, 364, 458, 785, 1049
Ecl136II GAGCTC 1 cut(s) 1238
EclXI CGGCCG 1 cut(s) 595
Eco130I CCWWGG 2 cut(s) 437, 865
Eco147I AGGCCT 2 cut(s) 256, 1125
Eco24I GRGCYC 2 cut(s) 305, 1240
Eco47I GGWCC 1 cut(s) 270
Eco52I CGGCCG 1 cut(s) 595
Eco53kI GAGCTC 1 cut(s) 1238
Eco57I CTGAAG 1 cut(s) 955
Eco88I CYCGRG 3 cut(s) 247, 294, 580
EcoICRI GAGCTC 1 cut(s) 1238
EcoO109I RGGNCCY 1 cut(s) 858
EcoRI GAATTC 1 cut(s) 78
EcoRII CCWGG 2 cut(s) 272, 498
EcoT14I CCWWGG 2 cut(s) 437, 865
EcoT38I GRGCYC 2 cut(s) 305, 1240
ErhI CCWWGG 2 cut(s) 437, 865
Esp3I CGTCTC 1 cut(s) 440
FaeI CATG 5 cut(s) 526, 801, 869, 954, 1223
FaiI YATR 9 cut(s) 524, 799, 867, 952, 1162, 1184, 1196, 1221, 1234
FalI AAGNNNNNCTT 5 cut(s) 478, 510, 1198, 1230, 1245
FatI CATG 5 cut(s) 522, 797, 865, 950, 1219
FauI CCCGC 1 cut(s) 947
Fnu4HI GCNGC 8 cut(s) 96, 117, 424, 505, 721, 724, 838, 1212
FokI GGATG 2 cut(s) 631, 1139
FriOI GRGCYC 2 cut(s) 305, 1240
Fsp4HI GCNGC 8 cut(s) 96, 117, 424, 505, 721, 724, 838, 1212
FspBI CTAG 1 cut(s) 737
GlaI GCGC 1 cut(s) 383
GluI GCNGC 8 cut(s) 96, 117, 424, 505, 721, 724, 838, 1212
HaeIII GGCC 6 cut(s) 256, 493, 520, 597, 860, 1125
HapII CCGG 5 cut(s) 12, 295, 379, 514, 594
HhaI GCGC 1 cut(s) 384
Hin1I GRCGYC 2 cut(s) 568, 640
Hin1II CATG 5 cut(s) 526, 801, 869, 954, 1223
Hin6I GCGC 1 cut(s) 382
HinP1I GCGC 1 cut(s) 382
HindIII AAGCTT 1 cut(s) 1259
HpaII CCGG 5 cut(s) 12, 295, 379, 514, 594
HphI GGTGA 1 cut(s) 405
Hpy188III TCNNGA 8 cut(s) 172, 186, 241, 268, 289, 429, 759, 798
Hpy99I CGWCG 8 cut(s) 286, 537, 540, 543, 555, 573, 603, 645
HpyAV CCTTC 9 cut(s) 45, 210, 384, 436, 471, 777, 798, 1064, 1133
HpyCH4IV ACGT 2 cut(s) 568, 640
HpyCH4V TGCA 5 cut(s) 95, 104, 399, 507, 1041
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 296, 504, 510
HpyF3I CTNAG 7 cut(s) 160, 170, 727, 757, 854, 1000, 1075
HpySE526I ACGT 2 cut(s) 568, 640
Hsp92I GRCGYC 2 cut(s) 568, 640
Hsp92II CATG 5 cut(s) 526, 801, 869, 954, 1223
HspAI GCGC 1 cut(s) 382
KroI GCCGGC 2 cut(s) 378, 593
KroNI GCCGGC 2 cut(s) 380, 595
Kzo9I GATC 5 cut(s) 8, 237, 285, 588, 1202
LguI GCTCTTC 1 cut(s) 364
LmnI GCTCC 3 cut(s) 944, 1083, 1243
Lsp1109I GCAGC 7 cut(s) 107, 410, 491, 732, 735, 849, 1198
LweI GCATC 2 cut(s) 386, 1161
MaeI CTAG 1 cut(s) 737
MaeII ACGT 2 cut(s) 568, 640
MalI GATC 5 cut(s) 10, 239, 287, 590, 1204
MboI GATC 5 cut(s) 8, 237, 285, 588, 1202
MflI RGATCY 1 cut(s) 8
MhlI GDGCHC 3 cut(s) 305, 919, 1240
MluCI AATT 2 cut(s) 22, 78
MlyI GAGTC 3 cut(s) 229, 535, 688
MmeI TCCRAC 5 cut(s) 248, 335, 533, 551, 1180
MroNI GCCGGC 2 cut(s) 378, 593
MroXI GAANNNNTTC 1 cut(s) 627
MseI TTAA 3 cut(s) 332, 743, 892
MslI CAYNNNNRTG 1 cut(s) 949
MspA1I CMGCKG 1 cut(s) 840
MspI CCGG 5 cut(s) 12, 295, 379, 514, 594
MspR9I CCNGG 5 cut(s) 13, 274, 295, 296, 500
MvaI CCWGG 2 cut(s) 274, 500
MvnI CGCG 2 cut(s) 290, 384
MwoI GCNNNNNNNGC 4 cut(s) 101, 296, 504, 510
NaeI GCCGGC 2 cut(s) 380, 595
NciI CCSGG 3 cut(s) 13, 295, 296
NcoI CCATGG 1 cut(s) 865
NdeII GATC 5 cut(s) 8, 237, 285, 588, 1202
NgoMIV GCCGGC 2 cut(s) 378, 593
NlaIII CATG 5 cut(s) 526, 801, 869, 954, 1223
NmeAIII GCCGAG 1 cut(s) 996
NruI TCGCGA 1 cut(s) 290
NspI RCATGY 1 cut(s) 954
NspV TTCGAA 3 cut(s) 82, 124, 631
PaeR7I CTCGAG 1 cut(s) 247
PagI TCATGA 1 cut(s) 797
PceI AGGCCT 2 cut(s) 256, 1125
PciSI GCTCTTC 1 cut(s) 364
PcsI WCGNNNNNNNCGW 5 cut(s) 287, 538, 547, 637, 688
PdiI GCCGGC 2 cut(s) 380, 595
PdmI GAANNNNTTC 1 cut(s) 627
PfeI GAWTC 8 cut(s) 60, 66, 72, 121, 156, 264, 432, 576
PflMI CCANNNNNTGG 1 cut(s) 987
PfoI TCCNGGA 1 cut(s) 11
PkrI GCNGC 8 cut(s) 97, 118, 425, 506, 722, 725, 839, 1213
Ple19I CGATCG 1 cut(s) 288
PleI GAGTC 3 cut(s) 228, 534, 687
PpsI GAGTC 3 cut(s) 228, 534, 687
Psp124BI GAGCTC 1 cut(s) 1240
Psp6I CCWGG 2 cut(s) 272, 498
PspGI CCWGG 2 cut(s) 272, 498
PspPI GGNCC 4 cut(s) 270, 491, 519, 858
PspXI VCTCGAGB 1 cut(s) 247
PstI CTGCAG 1 cut(s) 1043
PstNI CAGNNNCTG 1 cut(s) 861
PsuI RGATCY 1 cut(s) 8
PvuI CGATCG 1 cut(s) 288
RruI TCGCGA 1 cut(s) 290
RsaI GTAC 2 cut(s) 327, 809
RsaNI GTAC 2 cut(s) 326, 808
RseI CAYNNNNRTG 1 cut(s) 949
SacI GAGCTC 1 cut(s) 1240
SapI GCTCTTC 1 cut(s) 364
SaqAI TTAA 3 cut(s) 332, 743, 892
SatI GCNGC 8 cut(s) 96, 117, 424, 505, 721, 724, 838, 1212
Sau3AI GATC 5 cut(s) 8, 237, 285, 588, 1202
Sau96I GGNCC 4 cut(s) 270, 491, 519, 858
SchI GAGTC 3 cut(s) 229, 535, 688
ScrFI CCNGG 5 cut(s) 13, 274, 295, 296, 500
SduI GDGCHC 3 cut(s) 305, 919, 1240
SfaNI GCATC 2 cut(s) 386, 1161
SfcI CTRYAG 1 cut(s) 1039
Sfr274I CTCGAG 1 cut(s) 247
SfuI TTCGAA 3 cut(s) 82, 124, 631
SinI GGWCC 1 cut(s) 270
SlaI CTCGAG 1 cut(s) 247
SmaI CCCGGG 1 cut(s) 296
SmiMI CAYNNNNRTG 1 cut(s) 949
SmlI CTYRAG 1 cut(s) 247
SmoI CTYRAG 1 cut(s) 247
Sse9I AATT 2 cut(s) 22, 78
SseBI AGGCCT 2 cut(s) 256, 1125
SsiI CCGC 4 cut(s) 116, 511, 840, 954
SspMI CTAG 1 cut(s) 737
SstI GAGCTC 1 cut(s) 1240
StuI AGGCCT 2 cut(s) 256, 1125
StyD4I CCNGG 5 cut(s) 11, 272, 293, 294, 498
StyI CCWWGG 2 cut(s) 437, 865
TaiI ACGT 2 cut(s) 571, 643
TaqI TCGA 7 cut(s) 82, 124, 214, 248, 281, 631, 643
TasI AATT 2 cut(s) 22, 78
TauI GCSGC 1 cut(s) 119
TfiI GAWTC 8 cut(s) 60, 66, 72, 121, 156, 264, 432, 576
Tru1I TTAA 3 cut(s) 332, 743, 892
Tru9I TTAA 3 cut(s) 332, 743, 892
TscAI CASTG 1 cut(s) 951
TseI GCWGC 7 cut(s) 95, 423, 504, 720, 723, 837, 1211
TspDTI ATGAA 6 cut(s) 786, 796, 814, 893, 1119, 1162
TspMI CCCGGG 1 cut(s) 294
TspRI CASTG 1 cut(s) 951
Van91I CCANNNNNTGG 1 cut(s) 987
VpaK11BI GGWCC 1 cut(s) 270
XapI RAATTY 2 cut(s) 22, 78
XceI RCATGY 1 cut(s) 954
XhoI CTCGAG 1 cut(s) 247
XmaI CCCGGG 1 cut(s) 294
XmnI GAANNNNTTC 1 cut(s) 627
XspI CTAG 1 cut(s) 737
ZraI GACGTC 2 cut(s) 569, 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.