quinone oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02170 |
| rosa_chinensis | RchiOBHm_Chr5g0003051 RchiOBHm_Chr5g0003521 |
| rosa_laevigata | RLG00000031095 RLG00000031097 RLG00000031110 |
| rosa_multiflora | Rmu_co8296325.1_g000001 Rmu_sc0000146.1_g000013 Rmu_sc0004279.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00072500 |
| rosa_rugosa | Rorug04G0401800 Rorug04G0402000 Rorug04G0402100 |
| rosa_samantha | Rh5AG024500 Rh5BG027900 Rh5CG027400 Rh5CG033300 Rh5DG027900 Rh6DG004000 |
| rosa_wichuraiana | Rw5G002530 Rw5G002550 Rw5G002620 Rw5G002880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 186 |
| AcsI | RAATTY | 1 cut(s) | 154 |
| AcuI | CTGAAG | 1 cut(s) | 89 |
| AfaI | GTAC | 1 cut(s) | 138 |
| AgsI | TTSAA | 4 cut(s) | 62, 92, 153, 160 |
| AhlI | ACTAGT | 1 cut(s) | 85 |
| AjiI | CACGTC | 1 cut(s) | 265 |
| AluBI | AGCT | 2 cut(s) | 145, 308 |
| AluI | AGCT | 2 cut(s) | 145, 308 |
| Alw26I | GTCTC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 1 cut(s) | 305 |
| ApoI | RAATTY | 1 cut(s) | 154 |
| AsuHPI | GGTGA | 1 cut(s) | 353 |
| AsuII | TTCGAA | 1 cut(s) | 297 |
| BbsI | GAAGAC | 1 cut(s) | 212 |
| BbvCI | CCTCAGC | 1 cut(s) | 309 |
| BbvI | GCAGC | 1 cut(s) | 317 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 325, 359 |
| BcoDI | GTCTC | 1 cut(s) | 76 |
| BcuI | ACTAGT | 1 cut(s) | 85 |
| BfaI | CTAG | 1 cut(s) | 86 |
| BisI | GCNGC | 1 cut(s) | 306 |
| BlsI | GCNGC | 1 cut(s) | 307 |
| BmgBI | CACGTC | 1 cut(s) | 265 |
| BmsI | GCATC | 2 cut(s) | 166, 231 |
| BpiI | GAAGAC | 1 cut(s) | 212 |
| BpmI | CTGGAG | 1 cut(s) | 180 |
| Bpu10I | CCTNAGC | 1 cut(s) | 309 |
| Bpu14I | TTCGAA | 1 cut(s) | 297 |
| BpuEI | CTTGAG | 1 cut(s) | 308 |
| BsaJI | CCNNGG | 1 cut(s) | 180 |
| BseDI | CCNNGG | 1 cut(s) | 180 |
| BseGI | GGATG | 2 cut(s) | 114, 181 |
| BseMII | CTCAG | 1 cut(s) | 300 |
| BseRI | GAGGAG | 1 cut(s) | 236 |
| BseXI | GCAGC | 1 cut(s) | 317 |
| BsmAI | GTCTC | 1 cut(s) | 76 |
| BsmI | GAATGC | 1 cut(s) | 68 |
| Bsp119I | TTCGAA | 1 cut(s) | 297 |
| BspCNI | CTCAG | 1 cut(s) | 301 |
| BspT104I | TTCGAA | 1 cut(s) | 297 |
| BssECI | CCNNGG | 1 cut(s) | 180 |
| BssNAI | GTATAC | 1 cut(s) | 187 |
| BssT1I | CCWWGG | 1 cut(s) | 180 |
| Bst1107I | GTATAC | 1 cut(s) | 187 |
| BstBI | TTCGAA | 1 cut(s) | 297 |
| BstC8I | GCNNGC | 2 cut(s) | 7, 246 |
| BstDEI | CTNAG | 1 cut(s) | 309 |
| BstF5I | GGATG | 2 cut(s) | 114, 181 |
| BstMAI | GTCTC | 1 cut(s) | 76 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 311 |
| BstV1I | GCAGC | 1 cut(s) | 317 |
| BstV2I | GAAGAC | 1 cut(s) | 212 |
| BstZ17I | GTATAC | 1 cut(s) | 187 |
| BtrI | CACGTC | 1 cut(s) | 265 |
| BtsCI | GGATG | 2 cut(s) | 114, 181 |
| Cac8I | GCNNGC | 2 cut(s) | 7, 246 |
| Csp6I | GTAC | 1 cut(s) | 137 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 313, 348 |
| CviJI | RGCY | 3 cut(s) | 102, 145, 308 |
| CviKI_1 | RGCY | 3 cut(s) | 102, 145, 308 |
| CviQI | GTAC | 1 cut(s) | 137 |
| DdeI | CTNAG | 1 cut(s) | 309 |
| Eco130I | CCWWGG | 1 cut(s) | 180 |
| Eco57I | CTGAAG | 1 cut(s) | 89 |
| EcoT14I | CCWWGG | 1 cut(s) | 180 |
| EcoT22I | ATGCAT | 1 cut(s) | 167 |
| ErhI | CCWWGG | 1 cut(s) | 180 |
| FaiI | YATR | 3 cut(s) | 129, 187, 342 |
| FblI | GTMKAC | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 1 cut(s) | 306 |
| FokI | GGATG | 2 cut(s) | 121, 188 |
| Fsp4HI | GCNGC | 1 cut(s) | 306 |
| FspBI | CTAG | 1 cut(s) | 86 |
| GluI | GCNGC | 1 cut(s) | 306 |
| GsuI | CTGGAG | 1 cut(s) | 180 |
| HinfI | GANTC | 2 cut(s) | 122, 277 |
| HphI | GGTGA | 1 cut(s) | 353 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 2 cut(s) | 51, 347 |
| Hpy188III | TCNNGA | 3 cut(s) | 59, 197, 325 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| Hpy99I | CGWCG | 1 cut(s) | 266 |
| HpyAV | CCTTC | 2 cut(s) | 64, 68 |
| HpyCH4IV | ACGT | 1 cut(s) | 264 |
| HpyCH4V | TGCA | 2 cut(s) | 165, 248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 311 |
| HpyF3I | CTNAG | 1 cut(s) | 309 |
| HpySE526I | ACGT | 1 cut(s) | 264 |
| LpnPI | CCDG | 4 cut(s) | 80, 210, 215, 258 |
| Lsp1109I | GCAGC | 1 cut(s) | 317 |
| LweI | GCATC | 2 cut(s) | 166, 231 |
| MaeI | CTAG | 1 cut(s) | 86 |
| MaeII | ACGT | 1 cut(s) | 264 |
| MboII | GAAGA | 2 cut(s) | 217, 311 |
| MfeI | CAATTG | 1 cut(s) | 249 |
| MluCI | AATT | 2 cut(s) | 154, 249 |
| MmeI | TCCRAC | 1 cut(s) | 86 |
| MnlI | CCTC | 4 cut(s) | 214, 217, 220, 304 |
| Mph1103I | ATGCAT | 1 cut(s) | 167 |
| MseI | TTAA | 1 cut(s) | 39 |
| MslI | CAYNNNNRTG | 1 cut(s) | 170 |
| MspA1I | CMGCKG | 1 cut(s) | 308 |
| MunI | CAATTG | 1 cut(s) | 249 |
| Mva1269I | GAATGC | 1 cut(s) | 68 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 311 |
| NsiI | ATGCAT | 1 cut(s) | 167 |
| NspV | TTCGAA | 1 cut(s) | 297 |
| PctI | GAATGC | 1 cut(s) | 68 |
| PfeI | GAWTC | 2 cut(s) | 122, 277 |
| PkrI | GCNGC | 1 cut(s) | 307 |
| PvuII | CAGCTG | 1 cut(s) | 308 |
| RsaI | GTAC | 1 cut(s) | 138 |
| RsaNI | GTAC | 1 cut(s) | 137 |
| RseI | CAYNNNNRTG | 1 cut(s) | 170 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| SatI | GCNGC | 1 cut(s) | 306 |
| SetI | ASST | 8 cut(s) | 79, 100, 147, 212, 228, 267, 288, 310 |
| SfaNI | GCATC | 2 cut(s) | 166, 231 |
| SfuI | TTCGAA | 1 cut(s) | 297 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 170 |
| SmlI | CTYRAG | 1 cut(s) | 323 |
| SmoI | CTYRAG | 1 cut(s) | 323 |
| SpeI | ACTAGT | 1 cut(s) | 85 |
| Sse9I | AATT | 2 cut(s) | 154, 249 |
| SspMI | CTAG | 1 cut(s) | 86 |
| StyI | CCWWGG | 1 cut(s) | 180 |
| TaiI | ACGT | 1 cut(s) | 267 |
| TaqI | TCGA | 1 cut(s) | 297 |
| TasI | AATT | 2 cut(s) | 154, 249 |
| TatI | WGTACW | 1 cut(s) | 136 |
| TfiI | GAWTC | 2 cut(s) | 122, 277 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TseI | GCWGC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| XapI | RAATTY | 1 cut(s) | 154 |
| XmiI | GTMKAC | 1 cut(s) | 186 |
| XspI | CTAG | 1 cut(s) | 86 |
| Zsp2I | ATGCAT | 1 cut(s) | 167 |