quinone oxidoreductase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02170 |
| rosa_chinensis | RchiOBHm_Chr5g0003051 RchiOBHm_Chr5g0003521 |
| rosa_laevigata | RLG00000031095 RLG00000031097 RLG00000031110 |
| rosa_multiflora | Rmu_co8296325.1_g000001 Rmu_sc0000146.1_g000013 Rmu_sc0004279.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00072500 |
| rosa_rugosa | Rorug04G0401800 Rorug04G0402000 Rorug04G0402100 |
| rosa_samantha | Rh5AG024500 Rh5BG027900 Rh5CG027400 Rh5CG033300 Rh5DG027900 Rh6DG004000 |
| rosa_wichuraiana | Rw5G002530 Rw5G002550 Rw5G002620 Rw5G002880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 110 |
| Acc36I | ACCTGC | 1 cut(s) | 884 |
| Acc65I | GGTACC | 1 cut(s) | 896 |
| AccB1I | GGYRCC | 3 cut(s) | 184, 437, 896 |
| AccI | GTMKAC | 3 cut(s) | 104, 228, 1182 |
| AccII | CGCG | 1 cut(s) | 141 |
| AciI | CCGC | 2 cut(s) | 435, 446 |
| AclWI | GGATC | 1 cut(s) | 380 |
| AcsI | RAATTY | 2 cut(s) | 482, 1150 |
| AcuI | CTGAAG | 2 cut(s) | 603, 1085 |
| AcyI | GRCGYC | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 48 |
| AgsI | TTSAA | 7 cut(s) | 260, 728, 974, 1058, 1088, 1149, 1156 |
| AhlI | ACTAGT | 1 cut(s) | 92 |
| AjnI | CCWGG | 1 cut(s) | 867 |
| AleI | CACNNNNGTG | 1 cut(s) | 413 |
| Alw21I | GWGCWC | 1 cut(s) | 361 |
| Alw26I | GTCTC | 2 cut(s) | 620, 1072 |
| AlwI | GGATC | 1 cut(s) | 380 |
| AoxI | GGCC | 2 cut(s) | 735, 997 |
| ApeKI | GCWGC | 6 cut(s) | 512, 515, 530, 825, 1172, 1301 |
| ApoI | RAATTY | 2 cut(s) | 482, 1150 |
| Asp718I | GGTACC | 1 cut(s) | 896 |
| AspLEI | GCGC | 2 cut(s) | 141, 143 |
| AspS9I | GGNCC | 3 cut(s) | 116, 248, 546 |
| AsuC2I | CCSGG | 1 cut(s) | 238 |
| AsuHPI | GGTGA | 2 cut(s) | 273, 1349 |
| AsuII | TTCGAA | 1 cut(s) | 1293 |
| AvaII | GGWCC | 3 cut(s) | 116, 248, 546 |
| BanI | GGYRCC | 3 cut(s) | 184, 437, 896 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 459, 491 |
| BbsI | GAAGAC | 2 cut(s) | 30, 1208 |
| Bbv12I | GWGCWC | 1 cut(s) | 361 |
| BbvCI | CCTCAGC | 1 cut(s) | 1305 |
| BbvI | GCAGC | 6 cut(s) | 499, 502, 517, 812, 1159, 1313 |
| BccI | CCATC | 3 cut(s) | 302, 359, 850 |
| BceAI | ACGGC | 1 cut(s) | 289 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 760, 794, 1321, 1355 |
| BciT130I | CCWGG | 1 cut(s) | 869 |
| BcnI | CCSGG | 1 cut(s) | 238 |
| BcoDI | GTCTC | 2 cut(s) | 620, 1072 |
| BcuI | ACTAGT | 1 cut(s) | 92 |
| BfaI | CTAG | 4 cut(s) | 93, 189, 335, 572 |
| BfmI | CTRYAG | 1 cut(s) | 826 |
| BfuAI | ACCTGC | 1 cut(s) | 884 |
| BisI | GCNGC | 6 cut(s) | 513, 516, 531, 826, 1173, 1302 |
| BlsI | GCNGC | 6 cut(s) | 514, 517, 532, 827, 1174, 1303 |
| BmcAI | AGTACT | 2 cut(s) | 91, 97 |
| Bme1390I | CCNGG | 2 cut(s) | 238, 869 |
| Bme18I | GGWCC | 3 cut(s) | 116, 248, 546 |
| BmgT120I | GGNCC | 3 cut(s) | 116, 248, 546 |
| BmiI | GGNNCC | 7 cut(s) | 117, 186, 250, 349, 439, 874, 898 |
| BmrFI | CCNGG | 2 cut(s) | 238, 869 |
| BmrI | ACTGGG | 1 cut(s) | 28 |
| BmsI | GCATC | 3 cut(s) | 126, 954, 1227 |
| BmuI | ACTGGG | 1 cut(s) | 28 |
| BpiI | GAAGAC | 2 cut(s) | 30, 1208 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 359, 391 |
| BpmI | CTGGAG | 1 cut(s) | 1176 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1305 |
| Bpu14I | TTCGAA | 1 cut(s) | 1293 |
| BpuEI | CTTGAG | 2 cut(s) | 320, 1304 |
| BpuMI | CCSGG | 1 cut(s) | 238 |
| BsaHI | GRCGYC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 4 cut(s) | 237, 868, 1000, 1176 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 864, 894 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 48 |
| Bse1I | ACTGG | 4 cut(s) | 34, 186, 194, 464 |
| Bse3DI | GCAATG | 1 cut(s) | 73 |
| BseBI | CCWGG | 1 cut(s) | 869 |
| BseDI | CCNNGG | 4 cut(s) | 237, 868, 1000, 1176 |
| BseGI | GGATG | 2 cut(s) | 313, 1110 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 48 |
| BseMI | GCAATG | 1 cut(s) | 73 |
| BseMII | CTCAG | 3 cut(s) | 90, 299, 1296 |
| BseNI | ACTGG | 4 cut(s) | 34, 186, 194, 464 |
| BsePI | GCGCGC | 1 cut(s) | 139 |
| BseRI | GAGGAG | 2 cut(s) | 317, 1232 |
| BseXI | GCAGC | 6 cut(s) | 499, 502, 517, 812, 1159, 1313 |
| BsgI | GTGCAG | 1 cut(s) | 784 |
| Bsh1236I | CGCG | 1 cut(s) | 141 |
| BshFI | GGCC | 2 cut(s) | 737, 999 |
| BshNI | GGYRCC | 3 cut(s) | 184, 437, 896 |
| BsiHKAI | GWGCWC | 1 cut(s) | 361 |
| BsiSI | CCGG | 1 cut(s) | 237 |
| BslFI | GGGAC | 3 cut(s) | 16, 129, 998 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 48 |
| BsmAI | GTCTC | 2 cut(s) | 620, 1072 |
| BsmFI | GGGAC | 3 cut(s) | 16, 129, 998 |
| BsmI | GAATGC | 1 cut(s) | 1064 |
| BsnI | GGCC | 2 cut(s) | 737, 999 |
| Bsp119I | TTCGAA | 1 cut(s) | 1293 |
| Bsp1286I | GDGCHC | 1 cut(s) | 361 |
| Bsp143I | GATC | 3 cut(s) | 76, 288, 372 |
| BspACI | CCGC | 2 cut(s) | 435, 446 |
| BspANI | GGCC | 2 cut(s) | 737, 999 |
| BspCNI | CTCAG | 3 cut(s) | 91, 298, 1297 |
| BspFNI | CGCG | 1 cut(s) | 141 |
| BspHI | TCATGA | 1 cut(s) | 558 |
| BspLI | GGNNCC | 7 cut(s) | 117, 186, 250, 349, 439, 874, 898 |
| BspMAI | CTGCAG | 1 cut(s) | 830 |
| BspMI | ACCTGC | 1 cut(s) | 884 |
| BspPI | GGATC | 1 cut(s) | 380 |
| BspT104I | TTCGAA | 1 cut(s) | 1293 |
| BspT107I | GGYRCC | 3 cut(s) | 184, 437, 896 |
| BsrDI | GCAATG | 1 cut(s) | 73 |
| BsrI | ACTGG | 4 cut(s) | 34, 186, 194, 464 |
| BssECI | CCNNGG | 4 cut(s) | 237, 868, 1000, 1176 |
| BssHII | GCGCGC | 1 cut(s) | 139 |
| BssMI | GATC | 3 cut(s) | 76, 288, 372 |
| BssNAI | GTATAC | 1 cut(s) | 1183 |
| BssNI | GRCGYC | 1 cut(s) | 107 |
| BssT1I | CCWWGG | 2 cut(s) | 1000, 1176 |
| Bst1107I | GTATAC | 1 cut(s) | 1183 |
| Bst2UI | CCWGG | 1 cut(s) | 869 |
| Bst4CI | ACNGT | 3 cut(s) | 541, 631, 664 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstACI | GRCGYC | 1 cut(s) | 107 |
| BstBI | TTCGAA | 1 cut(s) | 1293 |
| BstC8I | GCNNGC | 6 cut(s) | 141, 269, 510, 535, 585, 1242 |
| BstDEI | CTNAG | 6 cut(s) | 99, 285, 411, 654, 861, 1305 |
| BstF5I | GGATG | 2 cut(s) | 313, 1110 |
| BstFNI | CGCG | 1 cut(s) | 141 |
| BstHHI | GCGC | 2 cut(s) | 141, 143 |
| BstKTI | GATC | 3 cut(s) | 79, 291, 375 |
| BstMAI | GTCTC | 2 cut(s) | 620, 1072 |
| BstMBI | GATC | 3 cut(s) | 76, 288, 372 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 10, 136, 149, 273, 911, 996, 1307 |
| BstNI | CCWGG | 1 cut(s) | 869 |
| BstSCI | CCNGG | 2 cut(s) | 236, 867 |
| BstSFI | CTRYAG | 1 cut(s) | 826 |
| BstUI | CGCG | 1 cut(s) | 141 |
| BstV1I | GCAGC | 6 cut(s) | 499, 502, 517, 812, 1159, 1313 |
| BstV2I | GAAGAC | 2 cut(s) | 30, 1208 |
| BstX2I | RGATCY | 1 cut(s) | 372 |
| BstYI | RGATCY | 1 cut(s) | 372 |
| BstZ17I | GTATAC | 1 cut(s) | 1183 |
| BsuRI | GGCC | 2 cut(s) | 737, 999 |
| BtsCI | GGATG | 2 cut(s) | 313, 1110 |
| BtsI | GCAGTG | 3 cut(s) | 772, 778, 835 |
| BtsIMutI | CAGTG | 3 cut(s) | 772, 778, 835 |
| BveI | ACCTGC | 1 cut(s) | 884 |
| Cac8I | GCNNGC | 6 cut(s) | 141, 269, 510, 535, 585, 1242 |
| CciI | TCATGA | 1 cut(s) | 558 |
| CfoI | GCGC | 2 cut(s) | 141, 143 |
| Cfr13I | GGNCC | 3 cut(s) | 116, 248, 546 |
| CseI | GACGC | 1 cut(s) | 911 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1309, 1344 |
| CviAII | CATG | 2 cut(s) | 559, 818 |
| DdeI | CTNAG | 6 cut(s) | 99, 285, 411, 654, 861, 1305 |
| DpnI | GATC | 3 cut(s) | 78, 290, 374 |
| DpnII | GATC | 3 cut(s) | 76, 288, 372 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| Eco130I | CCWWGG | 2 cut(s) | 1000, 1176 |
| Eco47I | GGWCC | 3 cut(s) | 116, 248, 546 |
| Eco57I | CTGAAG | 2 cut(s) | 603, 1085 |
| EcoRII | CCWGG | 1 cut(s) | 867 |
| EcoT14I | CCWWGG | 2 cut(s) | 1000, 1176 |
| EcoT22I | ATGCAT | 2 cut(s) | 947, 1163 |
| ErhI | CCWWGG | 2 cut(s) | 1000, 1176 |
| FaeI | CATG | 2 cut(s) | 562, 821 |
| FaqI | GGGAC | 3 cut(s) | 16, 129, 998 |
| FatI | CATG | 2 cut(s) | 558, 817 |
| FblI | GTMKAC | 3 cut(s) | 104, 228, 1182 |
| Fnu4HI | GCNGC | 6 cut(s) | 513, 516, 531, 826, 1173, 1302 |
| FokI | GGATG | 2 cut(s) | 320, 1117 |
| Fsp4HI | GCNGC | 6 cut(s) | 513, 516, 531, 826, 1173, 1302 |
| FspBI | CTAG | 4 cut(s) | 93, 189, 335, 572 |
| GlaI | GCGC | 2 cut(s) | 140, 142 |
| GluI | GCNGC | 6 cut(s) | 513, 516, 531, 826, 1173, 1302 |
| GsuI | CTGGAG | 1 cut(s) | 1176 |
| HaeIII | GGCC | 2 cut(s) | 737, 999 |
| HapII | CCGG | 1 cut(s) | 237 |
| HgaI | GACGC | 1 cut(s) | 911 |
| HhaI | GCGC | 2 cut(s) | 141, 143 |
| Hin1I | GRCGYC | 1 cut(s) | 107 |
| Hin1II | CATG | 2 cut(s) | 562, 821 |
| Hin6I | GCGC | 2 cut(s) | 139, 141 |
| HinP1I | GCGC | 2 cut(s) | 139, 141 |
| HincII | GTYRAC | 3 cut(s) | 105, 167, 244 |
| HindII | GTYRAC | 3 cut(s) | 105, 167, 244 |
| HinfI | GANTC | 6 cut(s) | 101, 607, 777, 850, 1118, 1273 |
| HpaII | CCGG | 1 cut(s) | 237 |
| HphI | GGTGA | 2 cut(s) | 273, 1349 |
| Hpy166II | GTNNAC | 7 cut(s) | 105, 167, 229, 244, 660, 923, 1183 |
| Hpy188III | TCNNGA | 9 cut(s) | 7, 114, 335, 345, 397, 559, 1055, 1193, 1321 |
| Hpy8I | GTNNAC | 7 cut(s) | 105, 167, 229, 244, 660, 923, 1183 |
| Hpy99I | CGWCG | 5 cut(s) | 109, 112, 115, 257, 905 |
| HpyAV | CCTTC | 6 cut(s) | 118, 155, 485, 596, 1060, 1064 |
| HpyCH4III | ACNGT | 3 cut(s) | 541, 631, 664 |
| HpyCH4IV | ACGT | 6 cut(s) | 107, 255, 453, 501, 925, 1260 |
| HpyCH4V | TGCA | 8 cut(s) | 537, 587, 765, 828, 887, 945, 1161, 1244 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 10, 136, 149, 273, 911, 996, 1307 |
| HpyF3I | CTNAG | 6 cut(s) | 99, 285, 411, 654, 861, 1305 |
| HpySE526I | ACGT | 6 cut(s) | 107, 255, 453, 501, 925, 1260 |
| Hsp92I | GRCGYC | 1 cut(s) | 107 |
| Hsp92II | CATG | 2 cut(s) | 562, 821 |
| HspAI | GCGC | 2 cut(s) | 139, 141 |
| KpnI | GGTACC | 1 cut(s) | 900 |
| Kzo9I | GATC | 3 cut(s) | 76, 288, 372 |
| LmnI | GCTCC | 4 cut(s) | 127, 642, 872, 932 |
| Lsp1109I | GCAGC | 6 cut(s) | 499, 502, 517, 812, 1159, 1313 |
| LweI | GCATC | 3 cut(s) | 126, 954, 1227 |
| MaeI | CTAG | 4 cut(s) | 93, 189, 335, 572 |
| MaeII | ACGT | 6 cut(s) | 107, 255, 453, 501, 925, 1260 |
| MaeIII | GTNAC | 1 cut(s) | 279 |
| MalI | GATC | 3 cut(s) | 78, 290, 374 |
| MboI | GATC | 3 cut(s) | 76, 288, 372 |
| MboII | GAAGA | 7 cut(s) | 30, 272, 574, 609, 611, 1213, 1307 |
| MfeI | CAATTG | 1 cut(s) | 1245 |
| MflI | RGATCY | 1 cut(s) | 372 |
| MhlI | GDGCHC | 1 cut(s) | 361 |
| MluCI | AATT | 6 cut(s) | 482, 551, 834, 1089, 1150, 1245 |
| MlyI | GAGTC | 2 cut(s) | 110, 616 |
| MmeI | TCCRAC | 2 cut(s) | 765, 1082 |
| Mph1103I | ATGCAT | 2 cut(s) | 947, 1163 |
| MseI | TTAA | 2 cut(s) | 498, 1035 |
| MslI | CAYNNNNRTG | 2 cut(s) | 413, 1166 |
| MspA1I | CMGCKG | 1 cut(s) | 1304 |
| MspI | CCGG | 1 cut(s) | 237 |
| MspR9I | CCNGG | 2 cut(s) | 238, 869 |
| MunI | CAATTG | 1 cut(s) | 1245 |
| Mva1269I | GAATGC | 1 cut(s) | 1064 |
| MvaI | CCWGG | 1 cut(s) | 869 |
| MvnI | CGCG | 1 cut(s) | 141 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 10, 136, 149, 273, 911, 996, 1307 |
| NciI | CCSGG | 1 cut(s) | 238 |
| NdeII | GATC | 3 cut(s) | 76, 288, 372 |
| NlaIII | CATG | 2 cut(s) | 562, 821 |
| NlaIV | GGNNCC | 7 cut(s) | 117, 186, 250, 349, 439, 874, 898 |
| NmuCI | GTSAC | 1 cut(s) | 279 |
| NsiI | ATGCAT | 2 cut(s) | 947, 1163 |
| NspV | TTCGAA | 1 cut(s) | 1293 |
| OliI | CACNNNNGTG | 1 cut(s) | 413 |
| PagI | TCATGA | 1 cut(s) | 558 |
| PauI | GCGCGC | 1 cut(s) | 139 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 252 |
| PctI | GAATGC | 1 cut(s) | 1064 |
| PfeI | GAWTC | 4 cut(s) | 777, 850, 1118, 1273 |
| PflFI | GACNNNGTC | 1 cut(s) | 109 |
| PkrI | GCNGC | 6 cut(s) | 514, 517, 532, 827, 1174, 1303 |
| PleI | GAGTC | 2 cut(s) | 109, 615 |
| PpsI | GAGTC | 2 cut(s) | 109, 615 |
| Psp6I | CCWGG | 1 cut(s) | 867 |
| PspGI | CCWGG | 1 cut(s) | 867 |
| PspN4I | GGNNCC | 7 cut(s) | 117, 186, 250, 349, 439, 874, 898 |
| PspPI | GGNCC | 3 cut(s) | 116, 248, 546 |
| PstI | CTGCAG | 1 cut(s) | 830 |
| PsuI | RGATCY | 1 cut(s) | 372 |
| PsyI | GACNNNGTC | 1 cut(s) | 109 |
| PteI | GCGCGC | 1 cut(s) | 139 |
| PvuII | CAGCTG | 1 cut(s) | 1304 |
| RseI | CAYNNNNRTG | 2 cut(s) | 413, 1166 |
| SalI | GTCGAC | 1 cut(s) | 103 |
| SaqAI | TTAA | 2 cut(s) | 498, 1035 |
| SatI | GCNGC | 6 cut(s) | 513, 516, 531, 826, 1173, 1302 |
| Sau3AI | GATC | 3 cut(s) | 76, 288, 372 |
| Sau96I | GGNCC | 3 cut(s) | 116, 248, 546 |
| ScaI | AGTACT | 2 cut(s) | 91, 97 |
| SchI | GAGTC | 2 cut(s) | 110, 616 |
| ScrFI | CCNGG | 2 cut(s) | 238, 869 |
| SduI | GDGCHC | 1 cut(s) | 361 |
| SfaNI | GCATC | 3 cut(s) | 126, 954, 1227 |
| SfcI | CTRYAG | 1 cut(s) | 826 |
| SfuI | TTCGAA | 1 cut(s) | 1293 |
| SinI | GGWCC | 3 cut(s) | 116, 248, 546 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 413, 1166 |
| SmlI | CTYRAG | 3 cut(s) | 5, 299, 1319 |
| SmoI | CTYRAG | 3 cut(s) | 5, 299, 1319 |
| SpeI | ACTAGT | 1 cut(s) | 92 |
| Sse9I | AATT | 6 cut(s) | 482, 551, 834, 1089, 1150, 1245 |
| SsiI | CCGC | 2 cut(s) | 435, 446 |
| SspMI | CTAG | 4 cut(s) | 93, 189, 335, 572 |
| StyD4I | CCNGG | 2 cut(s) | 236, 867 |
| StyI | CCWWGG | 2 cut(s) | 1000, 1176 |
| TaaI | ACNGT | 3 cut(s) | 541, 631, 664 |
| TaiI | ACGT | 6 cut(s) | 110, 258, 456, 504, 928, 1263 |
| TaqI | TCGA | 2 cut(s) | 104, 1293 |
| TasI | AATT | 6 cut(s) | 482, 551, 834, 1089, 1150, 1245 |
| TatI | WGTACW | 5 cut(s) | 89, 95, 175, 589, 1132 |
| TfiI | GAWTC | 4 cut(s) | 777, 850, 1118, 1273 |
| Tru1I | TTAA | 2 cut(s) | 498, 1035 |
| Tru9I | TTAA | 2 cut(s) | 498, 1035 |
| TscAI | CASTG | 3 cut(s) | 772, 778, 835 |
| TseFI | GTSAC | 1 cut(s) | 279 |
| TseI | GCWGC | 6 cut(s) | 512, 515, 530, 825, 1172, 1301 |
| Tsp45I | GTSAC | 1 cut(s) | 279 |
| TspDTI | ATGAA | 5 cut(s) | 547, 575, 781, 806, 1214 |
| TspGWI | ACGGA | 1 cut(s) | 261 |
| TspRI | CASTG | 3 cut(s) | 772, 778, 835 |
| Tth111I | GACNNNGTC | 1 cut(s) | 109 |
| VpaK11BI | GGWCC | 3 cut(s) | 116, 248, 546 |
| XapI | RAATTY | 2 cut(s) | 482, 1150 |
| XbaI | TCTAGA | 1 cut(s) | 334 |
| XmiI | GTMKAC | 3 cut(s) | 104, 228, 1182 |
| XspI | CTAG | 4 cut(s) | 93, 189, 335, 572 |
| ZraI | GACGTC | 1 cut(s) | 108 |
| ZrmI | AGTACT | 2 cut(s) | 91, 97 |
| Zsp2I | ATGCAT | 2 cut(s) | 947, 1163 |