Rh5CG033300

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
2160434 .. 2164868
4435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG033300.1

Sequence Viewer

Length: 1137 bp
ATGCTCCGGAAACTCGGATGTGGTGGGAGGTCAAGCACTGAGTCGTCGTTGTCGTCATCTGGCCCAAAGAAGGAGCTGTTGATGCGCGCCGTAGTTGCTACAAGTGAAGGTGGCGAAGATGAGGTGCTCCAAGTACAACTTGTGCCCAGACCAGTACCTAAAGCAAACGAGGTACTGATCAAAGTAGCCTATGCCGGGGTCAACCGAGCGGACGTGGAAGAGAGCAACCTCGGTGAGCCAACTCTTAAGGAACTTGAGAAGGCCGGACTTAAAGGAAAATATATGGGAGTAGAATGTTCAGGAACAGTATGTGCTCATGGGGAGATGTCCAAAAAAGACAAGCAAACCTGGAAAATAGACACTAAGGTGTGTGCGATTCTTGTCGGTGGTGCCTATGCGGAGTACGTCGCTGCTCCAATAGGACACCTTCTGAAATTCACAAAGAAGATTCCTGTCGAGCTAGCTGCTGCTATTCCACAAGATGCTTGCACCGTCTGGTCGGAATTGTTTATGAAGAAAAGGCTATACGAGGGGTCTCCTCCGGAGGAGGAGGGAGAGGGGAGTCGGCTATCTTCCGGAGAAACAGTTTTGATTCATGAAGGCTGCAGCGGAATTGGCATATTTGCGATTCAGATGGCTAAGTACCAGGGAGCAACTGCATTTGCAACAGCAGGTACTAACGCAAAGATAGCTGAATGTAGACGTCTTGGAGCTGACCTATGCATCAACTATAACAAAAATGACTTTGTTGAAGTGATAAAGGACCGGACTAAAGGCCAAGGCGTTGATGTCATATTGGATTGTGTTGGGTGCAATGGTTTGCATAGAAACCTTGAATGCTTGAAGAAAGATGGGAGACTTGTTCATATTTGTGACAATGGCCGTTGGATGAAAAAAATCGATGCTTATACAGAACTTTCAAATTACAAACTCATTGATGTGGCTTCCTTGTTATACAGAACTCCAGAGATGAAGACCGTCATTGTTAAGGAGGTTCAGGAGAAAGTGATGCCTGCAATTGAGAATGGCGACGTGAAACTTGTGATTCACAACCAGGTTTTTACATTCGAAGAAGCAGCCGAGGCACACAAACTCAAGAAAAGCAATCTAATCGGAAAAATATTGCTTCACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

378

Amino Acids

41.22

Weight (kDa)

7.89

Isoelectric Point (pI)

40.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 55 - 146 1.3e-07 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 204 - 290 2.4e-23 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 236 - 376 4.7e-20 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 706
Acc36I ACCTGC 1 cut(s) 662
AccB1I GGYRCC 1 cut(s) 389
AccBSI CCGCTC 1 cut(s) 209
AccI GTMKAC 1 cut(s) 700
AccII CGCG 1 cut(s) 87
AccIII TCCGGA 3 cut(s) 6, 541, 575
AciI CCGC 3 cut(s) 209, 398, 609
AcoI YGGCCR 1 cut(s) 880
AcsI RAATTY 1 cut(s) 434
AcyI GRCGYC 1 cut(s) 703
AfaI GTAC 6 cut(s) 135, 156, 174, 404, 644, 676
AfiI CCNNNNNNNGG 2 cut(s) 70, 195
AflII CTTAAG 1 cut(s) 245
AgsI TTSAA 4 cut(s) 752, 836, 844, 921
AjiI CACGTC 2 cut(s) 214, 1033
AjnI CCWGG 3 cut(s) 347, 645, 1053
AleI CACNNNNGTG 1 cut(s) 365
AluBI AGCT 5 cut(s) 76, 460, 464, 692, 713
AluI AGCT 5 cut(s) 76, 460, 464, 692, 713
Alw21I GWGCWC 2 cut(s) 129, 316
Alw26I GTCTC 2 cut(s) 540, 850
Aor13HI TCCGGA 3 cut(s) 6, 541, 575
AoxI GGCC 4 cut(s) 61, 261, 775, 880
ApeKI GCWGC 6 cut(s) 410, 464, 467, 603, 606, 1076
ApoI RAATTY 1 cut(s) 434
AspLEI GCGC 2 cut(s) 87, 89
AspS9I GGNCC 2 cut(s) 62, 763
AsuC2I CCSGG 1 cut(s) 196
AsuHPI GGTGA 2 cut(s) 245, 1121
AsuII TTCGAA 1 cut(s) 1068
AsuNHI GCTAGC 1 cut(s) 460
AvaII GGWCC 1 cut(s) 763
BaeGI GKGCMC 1 cut(s) 147
BanI GGYRCC 1 cut(s) 389
BbsI GAAGAC 1 cut(s) 980
Bbv12I GWGCWC 2 cut(s) 129, 316
BbvI GCAGC 6 cut(s) 397, 451, 454, 590, 618, 1088
BccI CCATC 2 cut(s) 628, 845
BceAI ACGGC 2 cut(s) 74, 867
BcgI CGANNNNNNTGC 4 cut(s) 446, 480, 1093, 1127
BciT130I CCWGG 3 cut(s) 349, 647, 1055
BclI TGATCA 1 cut(s) 177
BcnI CCSGG 1 cut(s) 196
BcoDI GTCTC 2 cut(s) 540, 850
BfaI CTAG 1 cut(s) 461
BfmI CTRYAG 1 cut(s) 604
BfrI CTTAAG 1 cut(s) 245
BfuAI ACCTGC 1 cut(s) 662
BisI GCNGC 6 cut(s) 411, 465, 468, 604, 607, 1077
BlsI GCNGC 6 cut(s) 412, 466, 469, 605, 608, 1078
Bme1390I CCNGG 4 cut(s) 196, 349, 647, 1055
Bme18I GGWCC 1 cut(s) 763
BmgBI CACGTC 2 cut(s) 214, 1033
BmgT120I GGNCC 2 cut(s) 62, 763
BmiI GGNNCC 1 cut(s) 391
BmrFI CCNGG 4 cut(s) 196, 349, 647, 1055
BmsI GCATC 5 cut(s) 72, 472, 732, 892, 999
BmtI GCTAGC 1 cut(s) 464
BpiI GAAGAC 1 cut(s) 980
BpmI CTGGAG 1 cut(s) 948
Bpu14I TTCGAA 1 cut(s) 1068
BpuEI CTTGAG 2 cut(s) 275, 1079
BpuMI CCSGG 1 cut(s) 196
Bsa29I ATCGAT 1 cut(s) 900
BsaHI GRCGYC 1 cut(s) 703
BsaI GGTCTC 1 cut(s) 540
BsaJI CCNNGG 5 cut(s) 195, 229, 646, 778, 1080
BsaWI WCCGGW 4 cut(s) 6, 541, 575, 765
BsaXI ACNNNNNCTCC 2 cut(s) 570, 600
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 195
Bse1I ACTGG 1 cut(s) 152
Bse3DI GCAATG 1 cut(s) 820
BseAI TCCGGA 3 cut(s) 6, 541, 575
BseBI CCWGG 3 cut(s) 349, 647, 1055
BseCI ATCGAT 1 cut(s) 900
BseDI CCNNGG 5 cut(s) 195, 229, 646, 778, 1080
BseGI GGATG 2 cut(s) 23, 894
BseLI CCNNNNNNNGG 2 cut(s) 70, 195
BseMI GCAATG 1 cut(s) 820
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 1 cut(s) 152
BsePI GCGCGC 1 cut(s) 85
BseRI GAGGAG 3 cut(s) 528, 560, 563
BseSI GKGCMC 1 cut(s) 147
BseXI GCAGC 6 cut(s) 397, 451, 454, 590, 618, 1088
Bsh1236I CGCG 1 cut(s) 87
BshFI GGCC 4 cut(s) 63, 263, 777, 882
BshNI GGYRCC 1 cut(s) 389
BshVI ATCGAT 1 cut(s) 900
BsiHKAI GWGCWC 2 cut(s) 129, 316
BsiSI CCGG 6 cut(s) 7, 195, 264, 542, 576, 766
BslI CCNNNNNNNGG 2 cut(s) 70, 195
BsmAI GTCTC 2 cut(s) 540, 850
BsmI GAATGC 1 cut(s) 842
BsnI GGCC 4 cut(s) 63, 263, 777, 882
Bso31I GGTCTC 1 cut(s) 540
Bsp119I TTCGAA 1 cut(s) 1068
Bsp1286I GDGCHC 3 cut(s) 129, 147, 316
Bsp13I TCCGGA 3 cut(s) 6, 541, 575
Bsp143I GATC 1 cut(s) 177
BspACI CCGC 3 cut(s) 209, 398, 609
BspANI GGCC 4 cut(s) 63, 263, 777, 882
BspCNI CTCAG 1 cut(s) 31
BspDI ATCGAT 1 cut(s) 900
BspEI TCCGGA 3 cut(s) 6, 541, 575
BspFNI CGCG 1 cut(s) 87
BspHI TCATGA 1 cut(s) 595
BspLI GGNNCC 1 cut(s) 391
BspMAI CTGCAG 1 cut(s) 608
BspMI ACCTGC 1 cut(s) 662
BspOI GCTAGC 1 cut(s) 464
BspT104I TTCGAA 1 cut(s) 1068
BspT107I GGYRCC 1 cut(s) 389
BspTI CTTAAG 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 540
BsrBI CCGCTC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 820
BsrI ACTGG 1 cut(s) 152
BssECI CCNNGG 5 cut(s) 195, 229, 646, 778, 1080
BssHII GCGCGC 1 cut(s) 85
BssMI GATC 1 cut(s) 177
BssNI GRCGYC 1 cut(s) 703
BssT1I CCWWGG 1 cut(s) 778
Bst2UI CCWGG 3 cut(s) 349, 647, 1055
Bst4CI ACNGT 4 cut(s) 307, 493, 586, 979
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 1 cut(s) 703
BstAFI CTTAAG 1 cut(s) 245
BstBI TTCGAA 1 cut(s) 1068
BstC8I GCNNGC 4 cut(s) 87, 462, 487, 1014
BstDEI CTNAG 3 cut(s) 39, 363, 639
BstF5I GGATG 2 cut(s) 23, 894
BstFNI CGCG 1 cut(s) 87
BstHHI GCGC 2 cut(s) 87, 89
BstKTI GATC 1 cut(s) 180
BstMAI GTCTC 2 cut(s) 540, 850
BstMBI GATC 1 cut(s) 177
BstMWI GCNNNNNNNGC 5 cut(s) 82, 95, 615, 689, 1082
BstNI CCWGG 3 cut(s) 349, 647, 1055
BstSCI CCNGG 4 cut(s) 194, 347, 645, 1053
BstSFI CTRYAG 1 cut(s) 604
BstSLI GKGCMC 1 cut(s) 147
BstUI CGCG 1 cut(s) 87
BstV1I GCAGC 6 cut(s) 397, 451, 454, 590, 618, 1088
BstV2I GAAGAC 1 cut(s) 980
Bsu15I ATCGAT 1 cut(s) 900
BsuRI GGCC 4 cut(s) 63, 263, 777, 882
BsuTUI ATCGAT 1 cut(s) 900
BtrI CACGTC 2 cut(s) 214, 1033
BtsCI GGATG 2 cut(s) 23, 894
BtsIMutI CAGTG 1 cut(s) 36
BveI ACCTGC 1 cut(s) 662
Cac8I GCNNGC 4 cut(s) 87, 462, 487, 1014
CciI TCATGA 1 cut(s) 595
CfoI GCGC 2 cut(s) 87, 89
Cfr13I GGNCC 2 cut(s) 62, 763
ClaI ATCGAT 1 cut(s) 900
CsiI ACCWGGT 1 cut(s) 1053
Csp6I GTAC 6 cut(s) 134, 155, 173, 403, 643, 675
CviAII CATG 2 cut(s) 317, 596
CviQI GTAC 6 cut(s) 134, 155, 173, 403, 643, 675
DdeI CTNAG 3 cut(s) 39, 363, 639
DpnI GATC 1 cut(s) 179
DpnII GATC 1 cut(s) 177
EaeI YGGCCR 1 cut(s) 880
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 778
Eco31I GGTCTC 1 cut(s) 540
Eco47I GGWCC 1 cut(s) 763
EcoRII CCWGG 3 cut(s) 347, 645, 1053
EcoT14I CCWWGG 1 cut(s) 778
EcoT22I ATGCAT 1 cut(s) 725
ErhI CCWWGG 1 cut(s) 778
FaeI CATG 2 cut(s) 320, 599
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FatI CATG 2 cut(s) 316, 595
FbaI TGATCA 1 cut(s) 177
FblI GTMKAC 1 cut(s) 700
Fnu4HI GCNGC 6 cut(s) 411, 465, 468, 604, 607, 1077
FokI GGATG 2 cut(s) 30, 901
Fsp4HI GCNGC 6 cut(s) 411, 465, 468, 604, 607, 1077
FspBI CTAG 1 cut(s) 461
GlaI GCGC 2 cut(s) 86, 88
GluI GCNGC 6 cut(s) 411, 465, 468, 604, 607, 1077
GsuI CTGGAG 1 cut(s) 948
HaeIII GGCC 4 cut(s) 63, 263, 777, 882
HapII CCGG 6 cut(s) 7, 195, 264, 542, 576, 766
HhaI GCGC 2 cut(s) 87, 89
Hin1I GRCGYC 1 cut(s) 703
Hin1II CATG 2 cut(s) 320, 599
Hin6I GCGC 2 cut(s) 85, 87
HinP1I GCGC 2 cut(s) 85, 87
HincII GTYRAC 1 cut(s) 202
HindII GTYRAC 1 cut(s) 202
HinfI GANTC 7 cut(s) 41, 376, 448, 562, 592, 628, 1045
HpaII CCGG 6 cut(s) 7, 195, 264, 542, 576, 766
HphI GGTGA 2 cut(s) 245, 1121
Hpy166II GTNNAC 2 cut(s) 202, 701
Hpy188I TCNGA 5 cut(s) 17, 432, 502, 633, 1115
Hpy188III TCNNGA 8 cut(s) 7, 300, 542, 576, 596, 965, 998, 1096
Hpy8I GTNNAC 2 cut(s) 202, 701
Hpy99I CGWCG 3 cut(s) 49, 410, 1034
HpyAV CCTTC 5 cut(s) 64, 101, 253, 437, 593
HpyCH4III ACNGT 4 cut(s) 307, 493, 586, 979
HpyCH4IV ACGT 4 cut(s) 213, 405, 703, 1032
HpyCH4V TGCA 8 cut(s) 489, 606, 659, 665, 723, 813, 823, 1016
HpyF10VI GCNNNNNNNGC 5 cut(s) 82, 95, 615, 689, 1082
HpyF3I CTNAG 3 cut(s) 39, 363, 639
HpySE526I ACGT 4 cut(s) 213, 405, 703, 1032
Hsp92I GRCGYC 1 cut(s) 703
Hsp92II CATG 2 cut(s) 320, 599
HspAI GCGC 2 cut(s) 85, 87
Kpn2I TCCGGA 3 cut(s) 6, 541, 575
Ksp22I TGATCA 1 cut(s) 177
Kzo9I GATC 1 cut(s) 177
LmnI GCTCC 6 cut(s) 9, 73, 132, 418, 650, 710
Lsp1109I GCAGC 6 cut(s) 397, 451, 454, 590, 618, 1088
LweI GCATC 5 cut(s) 72, 472, 732, 892, 999
MabI ACCWGGT 1 cut(s) 1053
MaeI CTAG 1 cut(s) 461
MaeII ACGT 4 cut(s) 213, 405, 703, 1032
MaeIII GTNAC 1 cut(s) 872
MalI GATC 1 cut(s) 179
MbiI CCGCTC 1 cut(s) 209
MboI GATC 1 cut(s) 177
MboII GAAGA 8 cut(s) 128, 230, 457, 526, 564, 856, 985, 1082
MfeI CAATTG 1 cut(s) 1017
MhlI GDGCHC 3 cut(s) 129, 147, 316
MluCI AATT 5 cut(s) 434, 503, 612, 922, 1017
MlyI GAGTC 2 cut(s) 50, 571
MmeI TCCRAC 2 cut(s) 480, 866
Mph1103I ATGCAT 1 cut(s) 725
MroI TCCGGA 3 cut(s) 6, 541, 575
MseI TTAA 3 cut(s) 246, 270, 987
MslI CAYNNNNRTG 3 cut(s) 365, 870, 938
MspA1I CMGCKG 1 cut(s) 609
MspCI CTTAAG 1 cut(s) 245
MspI CCGG 6 cut(s) 7, 195, 264, 542, 576, 766
MspR9I CCNGG 4 cut(s) 196, 349, 647, 1055
MunI CAATTG 1 cut(s) 1017
Mva1269I GAATGC 1 cut(s) 842
MvaI CCWGG 3 cut(s) 349, 647, 1055
MvnI CGCG 1 cut(s) 87
MwoI GCNNNNNNNGC 5 cut(s) 82, 95, 615, 689, 1082
NciI CCSGG 1 cut(s) 196
NdeII GATC 1 cut(s) 177
NheI GCTAGC 1 cut(s) 460
NlaIII CATG 2 cut(s) 320, 599
NlaIV GGNNCC 1 cut(s) 391
NmeAIII GCCGAG 1 cut(s) 1105
NmuCI GTSAC 1 cut(s) 872
NsiI ATGCAT 1 cut(s) 725
NspV TTCGAA 1 cut(s) 1068
OliI CACNNNNGTG 1 cut(s) 365
PagI TCATGA 1 cut(s) 595
PauI GCGCGC 1 cut(s) 85
PcsI WCGNNNNNNNCGW 1 cut(s) 50
PctI GAATGC 1 cut(s) 842
PfeI GAWTC 5 cut(s) 376, 448, 592, 628, 1045
PkrI GCNGC 6 cut(s) 412, 466, 469, 605, 608, 1078
PleI GAGTC 2 cut(s) 49, 570
PpsI GAGTC 2 cut(s) 49, 570
Psp6I CCWGG 3 cut(s) 347, 645, 1053
PspGI CCWGG 3 cut(s) 347, 645, 1053
PspN4I GGNNCC 1 cut(s) 391
PspPI GGNCC 2 cut(s) 62, 763
PstI CTGCAG 1 cut(s) 608
PteI GCGCGC 1 cut(s) 85
RsaI GTAC 6 cut(s) 135, 156, 174, 404, 644, 676
RsaNI GTAC 6 cut(s) 134, 155, 173, 403, 643, 675
RseI CAYNNNNRTG 3 cut(s) 365, 870, 938
SaqAI TTAA 3 cut(s) 246, 270, 987
SatI GCNGC 6 cut(s) 411, 465, 468, 604, 607, 1077
Sau3AI GATC 1 cut(s) 177
Sau96I GGNCC 2 cut(s) 62, 763
SchI GAGTC 2 cut(s) 50, 571
ScrFI CCNGG 4 cut(s) 196, 349, 647, 1055
SduI GDGCHC 3 cut(s) 129, 147, 316
SexAI ACCWGGT 1 cut(s) 1053
SfaNI GCATC 5 cut(s) 72, 472, 732, 892, 999
SfcI CTRYAG 1 cut(s) 604
SfuI TTCGAA 1 cut(s) 1068
SinI GGWCC 1 cut(s) 763
SmiMI CAYNNNNRTG 3 cut(s) 365, 870, 938
SmlI CTYRAG 3 cut(s) 245, 254, 1094
SmoI CTYRAG 3 cut(s) 245, 254, 1094
Sse9I AATT 5 cut(s) 434, 503, 612, 922, 1017
SsiI CCGC 3 cut(s) 209, 398, 609
SspI AATATT 1 cut(s) 1122
SspMI CTAG 1 cut(s) 461
StyD4I CCNGG 4 cut(s) 194, 347, 645, 1053
StyI CCWWGG 1 cut(s) 778
TaaI ACNGT 4 cut(s) 307, 493, 586, 979
TaiI ACGT 4 cut(s) 216, 408, 706, 1035
TaqI TCGA 3 cut(s) 456, 900, 1068
TasI AATT 5 cut(s) 434, 503, 612, 922, 1017
TatI WGTACW 1 cut(s) 133
TfiI GAWTC 5 cut(s) 376, 448, 592, 628, 1045
Tru1I TTAA 3 cut(s) 246, 270, 987
Tru9I TTAA 3 cut(s) 246, 270, 987
TscAI CASTG 1 cut(s) 43
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 6 cut(s) 410, 464, 467, 603, 606, 1076
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 6 cut(s) 527, 584, 612, 854, 905, 986
TspRI CASTG 1 cut(s) 43
Vha464I CTTAAG 1 cut(s) 245
VpaK11BI GGWCC 1 cut(s) 763
XapI RAATTY 1 cut(s) 434
XmiI GTMKAC 1 cut(s) 700
XspI CTAG 1 cut(s) 461
ZraI GACGTC 1 cut(s) 704
Zsp2I ATGCAT 1 cut(s) 725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.