Upstream activation factor subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g30330 |
| malus_domestica | MD03G1190700.v1.1 MD11G1207400.v1.1 |
| prunus_persica | Prupe.4G228000_v2.0.a1 |
| pyrus_communis | pycom03g14390 pycom11g18060 |
| rosa_chinensis | RchiOBHm_Chr5g0056201 |
| rosa_laevigata | RLG00000035063 |
| rosa_multiflora | Rmu_co7981676.1_g000001 Rmu_sc0000680.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00024090 |
| rosa_rugosa | Rorug05G0298000 Rorug05G0298100 |
| rosa_samantha | Rh5AG369100 Rh5BG380200 Rh5CG403000 Rh5DG393200 |
| rosa_wichuraiana | Rw0G004420 Rw0G012660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 421 |
| AatII | GACGTC | 2 cut(s) | 592, 687 |
| AccB1I | GGYRCC | 1 cut(s) | 336 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 292 |
| AccII | CGCG | 4 cut(s) | 312, 625, 720, 1328 |
| AclWI | GGATC | 4 cut(s) | 542, 751, 1472, 1485 |
| AcoI | YGGCCR | 3 cut(s) | 620, 715, 1096 |
| AcsI | RAATTY | 3 cut(s) | 242, 328, 1390 |
| AcuI | CTGAAG | 2 cut(s) | 1398, 1584 |
| AcyI | GRCGYC | 5 cut(s) | 388, 562, 589, 657, 684 |
| AfaI | GTAC | 3 cut(s) | 305, 969, 1234 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 179, 292, 314, 1007, 1429 |
| AgsI | TTSAA | 5 cut(s) | 119, 247, 1286, 1293, 1520 |
| AjiI | CACGTC | 1 cut(s) | 1577 |
| AjnI | CCWGG | 3 cut(s) | 410, 1042, 1171 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 203, 235 |
| AluBI | AGCT | 8 cut(s) | 466, 534, 602, 614, 697, 709, 1207, 1516 |
| AluI | AGCT | 8 cut(s) | 466, 534, 602, 614, 697, 709, 1207, 1516 |
| Alw26I | GTCTC | 3 cut(s) | 189, 274, 1217 |
| AlwI | GGATC | 4 cut(s) | 542, 751, 1472, 1485 |
| Ama87I | CYCGRG | 5 cut(s) | 277, 603, 698, 941, 947 |
| AoxI | GGCC | 7 cut(s) | 620, 640, 715, 735, 750, 1039, 1096 |
| ApaI | GGGCCC | 1 cut(s) | 754 |
| ApeKI | GCWGC | 5 cut(s) | 596, 599, 691, 694, 1207 |
| ApoI | RAATTY | 3 cut(s) | 242, 328, 1390 |
| AspLEI | GCGC | 1 cut(s) | 1013 |
| AspS9I | GGNCC | 5 cut(s) | 414, 750, 751, 1040, 1358 |
| AsuC2I | CCSGG | 1 cut(s) | 334 |
| AsuHPI | GGTGA | 2 cut(s) | 161, 251 |
| AvaI | CYCGRG | 5 cut(s) | 277, 603, 698, 941, 947 |
| AvaII | GGWCC | 2 cut(s) | 414, 1358 |
| AxyI | CCTNAGG | 1 cut(s) | 1002 |
| BaeGI | GKGCMC | 1 cut(s) | 754 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 951, 984 |
| BalI | TGGCCA | 1 cut(s) | 1098 |
| BamHI | GGATCC | 1 cut(s) | 1477 |
| BanI | GGYRCC | 1 cut(s) | 336 |
| BanII | GRGCYC | 3 cut(s) | 754, 948, 954 |
| BbvCI | CCTCAGC | 1 cut(s) | 810 |
| BbvI | GCAGC | 5 cut(s) | 608, 611, 703, 706, 1194 |
| BccI | CCATC | 5 cut(s) | 146, 185, 348, 1001, 1107 |
| BciT130I | CCWGG | 3 cut(s) | 412, 1044, 1173 |
| BcnI | CCSGG | 1 cut(s) | 334 |
| BcoDI | GTCTC | 3 cut(s) | 189, 274, 1217 |
| BfmI | CTRYAG | 1 cut(s) | 1082 |
| BfoI | RGCGCY | 1 cut(s) | 1014 |
| Bme1390I | CCNGG | 4 cut(s) | 334, 412, 1044, 1173 |
| Bme18I | GGWCC | 2 cut(s) | 414, 1358 |
| BmeT110I | CYCGRG | 5 cut(s) | 277, 603, 698, 941, 947 |
| BmgBI | CACGTC | 1 cut(s) | 1577 |
| BmgT120I | GGNCC | 5 cut(s) | 414, 750, 751, 1040, 1358 |
| BmiI | GGNNCC | 5 cut(s) | 207, 319, 338, 752, 1479 |
| BmrFI | CCNGG | 4 cut(s) | 334, 412, 1044, 1173 |
| BmsI | GCATC | 4 cut(s) | 983, 1407, 1498, 1551 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 450, 482 |
| BpmI | CTGGAG | 3 cut(s) | 842, 1406, 1493 |
| Bpu10I | CCTNAGC | 1 cut(s) | 810 |
| BpuMI | CCSGG | 1 cut(s) | 334 |
| BsaHI | GRCGYC | 5 cut(s) | 388, 562, 589, 657, 684 |
| BsaJI | CCNNGG | 7 cut(s) | 178, 410, 1042, 1043, 1112, 1171, 1317 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 781, 811, 1146, 1176 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 179, 292, 314, 1007, 1429 |
| Bse1I | ACTGG | 4 cut(s) | 173, 297, 1301, 1423 |
| Bse21I | CCTNAGG | 1 cut(s) | 1002 |
| Bse3DI | GCAATG | 2 cut(s) | 1204, 1275 |
| BseBI | CCWGG | 3 cut(s) | 412, 1044, 1173 |
| BseDI | CCNNGG | 7 cut(s) | 178, 410, 1042, 1043, 1112, 1171, 1317 |
| BseGI | GGATG | 3 cut(s) | 974, 1012, 1099 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 179, 292, 314, 1007, 1429 |
| BseMI | GCAATG | 2 cut(s) | 1204, 1275 |
| BseMII | CTCAG | 4 cut(s) | 824, 830, 1110, 1419 |
| BseNI | ACTGG | 4 cut(s) | 173, 297, 1301, 1423 |
| BseRI | GAGGAG | 4 cut(s) | 391, 789, 825, 909 |
| BseSI | GKGCMC | 1 cut(s) | 754 |
| BseX3I | CGGCCG | 2 cut(s) | 620, 715 |
| BseXI | GCAGC | 5 cut(s) | 608, 611, 703, 706, 1194 |
| BseYI | CCCAGC | 2 cut(s) | 804, 953 |
| BsgI | GTGCAG | 2 cut(s) | 615, 710 |
| Bsh1236I | CGCG | 4 cut(s) | 312, 625, 720, 1328 |
| Bsh1285I | CGRYCG | 2 cut(s) | 623, 718 |
| BshFI | GGCC | 7 cut(s) | 622, 642, 717, 737, 752, 1041, 1098 |
| BshNI | GGYRCC | 1 cut(s) | 336 |
| BsiEI | CGRYCG | 2 cut(s) | 623, 718 |
| BsiHKCI | CYCGRG | 5 cut(s) | 277, 603, 698, 941, 947 |
| BsiSI | CCGG | 1 cut(s) | 334 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 179, 292, 314, 1007, 1429 |
| BsmAI | GTCTC | 3 cut(s) | 189, 274, 1217 |
| BsnI | GGCC | 7 cut(s) | 622, 642, 717, 737, 752, 1041, 1098 |
| BsoBI | CYCGRG | 5 cut(s) | 277, 603, 698, 941, 947 |
| Bsp120I | GGGCCC | 1 cut(s) | 750 |
| Bsp1286I | GDGCHC | 3 cut(s) | 754, 948, 954 |
| Bsp143I | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| BspANI | GGCC | 7 cut(s) | 622, 642, 717, 737, 752, 1041, 1098 |
| BspCNI | CTCAG | 4 cut(s) | 823, 829, 1111, 1420 |
| BspFNI | CGCG | 4 cut(s) | 312, 625, 720, 1328 |
| BspHI | TCATGA | 1 cut(s) | 1598 |
| BspLI | GGNNCC | 5 cut(s) | 207, 319, 338, 752, 1479 |
| BspPI | GGATC | 4 cut(s) | 542, 751, 1472, 1485 |
| BspT107I | GGYRCC | 1 cut(s) | 336 |
| BsrDI | GCAATG | 2 cut(s) | 1204, 1275 |
| BsrI | ACTGG | 4 cut(s) | 173, 297, 1301, 1423 |
| BssECI | CCNNGG | 7 cut(s) | 178, 410, 1042, 1043, 1112, 1171, 1317 |
| BssMI | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| BssNI | GRCGYC | 5 cut(s) | 388, 562, 589, 657, 684 |
| BssT1I | CCWWGG | 3 cut(s) | 178, 1112, 1317 |
| Bst2UI | CCWGG | 3 cut(s) | 412, 1044, 1173 |
| Bst4CI | ACNGT | 4 cut(s) | 50, 418, 1137, 1232 |
| Bst6I | CTCTTC | 3 cut(s) | 66, 441, 1113 |
| BstACI | GRCGYC | 5 cut(s) | 388, 562, 589, 657, 684 |
| BstC8I | GCNNGC | 4 cut(s) | 111, 532, 881, 1263 |
| BstDEI | CTNAG | 5 cut(s) | 810, 816, 1002, 1119, 1428 |
| BstF5I | GGATG | 3 cut(s) | 974, 1012, 1099 |
| BstFNI | CGCG | 4 cut(s) | 312, 625, 720, 1328 |
| BstH2I | RGCGCY | 1 cut(s) | 1014 |
| BstHHI | GCGC | 1 cut(s) | 1013 |
| BstKTI | GATC | 4 cut(s) | 550, 759, 1480, 1598 |
| BstMAI | GTCTC | 3 cut(s) | 189, 274, 1217 |
| BstMBI | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| BstMCI | CGRYCG | 2 cut(s) | 623, 718 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 540, 561 |
| BstNI | CCWGG | 3 cut(s) | 412, 1044, 1173 |
| BstNSI | RCATGY | 1 cut(s) | 166 |
| BstSCI | CCNGG | 4 cut(s) | 332, 410, 1042, 1171 |
| BstSFI | CTRYAG | 1 cut(s) | 1082 |
| BstSLI | GKGCMC | 1 cut(s) | 754 |
| BstUI | CGCG | 4 cut(s) | 312, 625, 720, 1328 |
| BstV1I | GCAGC | 5 cut(s) | 608, 611, 703, 706, 1194 |
| BstX2I | RGATCY | 2 cut(s) | 756, 1477 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1172 |
| BstYI | RGATCY | 2 cut(s) | 756, 1477 |
| BstZI | CGGCCG | 2 cut(s) | 620, 715 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1002 |
| BsuRI | GGCC | 7 cut(s) | 622, 642, 717, 737, 752, 1041, 1098 |
| BtrI | CACGTC | 1 cut(s) | 1577 |
| BtsCI | GGATG | 3 cut(s) | 974, 1012, 1099 |
| Cac8I | GCNNGC | 4 cut(s) | 111, 532, 881, 1263 |
| CciI | TCATGA | 1 cut(s) | 1598 |
| CciNI | GCGGCCGC | 2 cut(s) | 620, 715 |
| CfoI | GCGC | 1 cut(s) | 1013 |
| Cfr13I | GGNCC | 5 cut(s) | 414, 750, 751, 1040, 1358 |
| CseI | GACGC | 3 cut(s) | 396, 570, 665 |
| Csp6I | GTAC | 3 cut(s) | 304, 968, 1233 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1045, 1080 |
| CviAII | CATG | 2 cut(s) | 163, 1599 |
| CviQI | GTAC | 3 cut(s) | 304, 968, 1233 |
| DdeI | CTNAG | 5 cut(s) | 810, 816, 1002, 1119, 1428 |
| DpnI | GATC | 4 cut(s) | 549, 758, 1479, 1597 |
| DpnII | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| DraI | TTTAAA | 1 cut(s) | 1053 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 421 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 421 |
| EaeI | YGGCCR | 3 cut(s) | 620, 715, 1096 |
| EagI | CGGCCG | 2 cut(s) | 620, 715 |
| Eam1104I | CTCTTC | 3 cut(s) | 66, 441, 1113 |
| EarI | CTCTTC | 3 cut(s) | 66, 441, 1113 |
| EciI | GGCGGA | 2 cut(s) | 880, 973 |
| EclXI | CGGCCG | 2 cut(s) | 620, 715 |
| Eco130I | CCWWGG | 3 cut(s) | 178, 1112, 1317 |
| Eco24I | GRGCYC | 3 cut(s) | 754, 948, 954 |
| Eco32I | GATATC | 2 cut(s) | 526, 1525 |
| Eco47I | GGWCC | 2 cut(s) | 414, 1358 |
| Eco52I | CGGCCG | 2 cut(s) | 620, 715 |
| Eco57I | CTGAAG | 2 cut(s) | 1398, 1584 |
| Eco81I | CCTNAGG | 1 cut(s) | 1002 |
| Eco88I | CYCGRG | 5 cut(s) | 277, 603, 698, 941, 947 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1358 |
| EcoRI | GAATTC | 2 cut(s) | 242, 328 |
| EcoRII | CCWGG | 3 cut(s) | 410, 1042, 1171 |
| EcoRV | GATATC | 2 cut(s) | 526, 1525 |
| EcoT14I | CCWWGG | 3 cut(s) | 178, 1112, 1317 |
| EcoT38I | GRGCYC | 3 cut(s) | 754, 948, 954 |
| ErhI | CCWWGG | 3 cut(s) | 178, 1112, 1317 |
| FaeI | CATG | 2 cut(s) | 166, 1602 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 251, 283, 630, 662, 725, 757 |
| FatI | CATG | 2 cut(s) | 162, 1598 |
| FauI | CCCGC | 5 cut(s) | 387, 789, 888, 979, 1002 |
| FokI | GGATG | 3 cut(s) | 961, 1019, 1086 |
| FriOI | GRGCYC | 3 cut(s) | 754, 948, 954 |
| GlaI | GCGC | 1 cut(s) | 1012 |
| GsaI | CCCAGC | 2 cut(s) | 808, 957 |
| GsuI | CTGGAG | 3 cut(s) | 842, 1406, 1493 |
| HaeII | RGCGCY | 1 cut(s) | 1014 |
| HaeIII | GGCC | 7 cut(s) | 622, 642, 717, 737, 752, 1041, 1098 |
| HapII | CCGG | 1 cut(s) | 334 |
| HgaI | GACGC | 3 cut(s) | 396, 570, 665 |
| HhaI | GCGC | 1 cut(s) | 1013 |
| Hin1I | GRCGYC | 5 cut(s) | 388, 562, 589, 657, 684 |
| Hin1II | CATG | 2 cut(s) | 166, 1602 |
| Hin6I | GCGC | 1 cut(s) | 1011 |
| HinP1I | GCGC | 1 cut(s) | 1011 |
| HindIII | AAGCTT | 2 cut(s) | 532, 1514 |
| HinfI | GANTC | 7 cut(s) | 275, 406, 606, 701, 820, 1331, 1486 |
| HpaII | CCGG | 1 cut(s) | 334 |
| HphI | GGTGA | 2 cut(s) | 161, 251 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 304 |
| Hpy188I | TCNGA | 8 cut(s) | 236, 560, 655, 819, 991, 1378, 1429, 1485 |
| Hpy188III | TCNNGA | 8 cut(s) | 279, 898, 1222, 1335, 1472, 1520, 1591, 1599 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 304 |
| Hpy99I | CGWCG | 7 cut(s) | 390, 564, 591, 594, 659, 686, 689 |
| HpyCH4III | ACNGT | 4 cut(s) | 50, 418, 1137, 1232 |
| HpyCH4IV | ACGT | 3 cut(s) | 589, 684, 1576 |
| HpyCH4V | TGCA | 8 cut(s) | 596, 691, 1197, 1280, 1388, 1438, 1511, 1550 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 540, 561 |
| HpyF3I | CTNAG | 5 cut(s) | 810, 816, 1002, 1119, 1428 |
| HpySE526I | ACGT | 3 cut(s) | 589, 684, 1576 |
| Hsp92I | GRCGYC | 5 cut(s) | 388, 562, 589, 657, 684 |
| Hsp92II | CATG | 2 cut(s) | 166, 1602 |
| HspAI | GCGC | 1 cut(s) | 1011 |
| Kzo9I | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| LmnI | GCTCC | 2 cut(s) | 205, 1425 |
| Lsp1109I | GCAGC | 5 cut(s) | 608, 611, 703, 706, 1194 |
| LweI | GCATC | 4 cut(s) | 983, 1407, 1498, 1551 |
| MaeII | ACGT | 3 cut(s) | 589, 684, 1576 |
| MaeIII | GTNAC | 3 cut(s) | 158, 1175, 1346 |
| MalI | GATC | 4 cut(s) | 549, 758, 1479, 1597 |
| MboI | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| MboII | GAAGA | 4 cut(s) | 83, 200, 458, 1100 |
| MflI | RGATCY | 2 cut(s) | 756, 1477 |
| MhlI | GDGCHC | 3 cut(s) | 754, 948, 954 |
| MlsI | TGGCCA | 1 cut(s) | 1098 |
| MluCI | AATT | 6 cut(s) | 102, 242, 328, 871, 1188, 1390 |
| MluNI | TGGCCA | 1 cut(s) | 1098 |
| MlyI | GAGTC | 5 cut(s) | 269, 400, 615, 710, 1325 |
| MmeI | TCCRAC | 5 cut(s) | 214, 583, 678, 1014, 1127 |
| Mox20I | TGGCCA | 1 cut(s) | 1098 |
| MscI | TGGCCA | 1 cut(s) | 1098 |
| MseI | TTAA | 3 cut(s) | 201, 1052, 1245 |
| Msp20I | TGGCCA | 1 cut(s) | 1098 |
| MspI | CCGG | 1 cut(s) | 334 |
| MspR9I | CCNGG | 4 cut(s) | 334, 412, 1044, 1173 |
| MssI | GTTTAAAC | 1 cut(s) | 1053 |
| MvaI | CCWGG | 3 cut(s) | 412, 1044, 1173 |
| MvnI | CGCG | 4 cut(s) | 312, 625, 720, 1328 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 540, 561 |
| NciI | CCSGG | 1 cut(s) | 334 |
| NdeII | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| NlaIII | CATG | 2 cut(s) | 166, 1602 |
| NlaIV | GGNNCC | 5 cut(s) | 207, 319, 338, 752, 1479 |
| NmeAIII | GCCGAG | 2 cut(s) | 595, 690 |
| NmuCI | GTSAC | 1 cut(s) | 158 |
| NotI | GCGGCCGC | 2 cut(s) | 620, 715 |
| NspI | RCATGY | 1 cut(s) | 166 |
| PaeR7I | CTCGAG | 3 cut(s) | 277, 603, 698 |
| PagI | TCATGA | 1 cut(s) | 1598 |
| PasI | CCCWGGG | 1 cut(s) | 1043 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 622, 717 |
| PfeI | GAWTC | 2 cut(s) | 820, 1486 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 292 |
| PleI | GAGTC | 5 cut(s) | 269, 400, 614, 709, 1325 |
| PmeI | GTTTAAAC | 1 cut(s) | 1053 |
| PpsI | GAGTC | 5 cut(s) | 269, 400, 614, 709, 1325 |
| PpuMI | RGGWCCY | 1 cut(s) | 1358 |
| Psp5II | RGGWCCY | 1 cut(s) | 1358 |
| Psp6I | CCWGG | 3 cut(s) | 410, 1042, 1171 |
| PspFI | CCCAGC | 2 cut(s) | 804, 953 |
| PspGI | CCWGG | 3 cut(s) | 410, 1042, 1171 |
| PspN4I | GGNNCC | 5 cut(s) | 207, 319, 338, 752, 1479 |
| PspOMI | GGGCCC | 1 cut(s) | 750 |
| PspPI | GGNCC | 5 cut(s) | 414, 750, 751, 1040, 1358 |
| PspPPI | RGGWCCY | 1 cut(s) | 1358 |
| PspXI | VCTCGAGB | 2 cut(s) | 603, 698 |
| PsuI | RGATCY | 2 cut(s) | 756, 1477 |
| RsaI | GTAC | 3 cut(s) | 305, 969, 1234 |
| RsaNI | GTAC | 3 cut(s) | 304, 968, 1233 |
| SaqAI | TTAA | 3 cut(s) | 201, 1052, 1245 |
| Sau3AI | GATC | 4 cut(s) | 547, 756, 1477, 1595 |
| Sau96I | GGNCC | 5 cut(s) | 414, 750, 751, 1040, 1358 |
| SchI | GAGTC | 5 cut(s) | 269, 400, 615, 710, 1325 |
| ScrFI | CCNGG | 4 cut(s) | 334, 412, 1044, 1173 |
| SduI | GDGCHC | 3 cut(s) | 754, 948, 954 |
| SfaNI | GCATC | 4 cut(s) | 983, 1407, 1498, 1551 |
| SfcI | CTRYAG | 1 cut(s) | 1082 |
| Sfr274I | CTCGAG | 3 cut(s) | 277, 603, 698 |
| SinI | GGWCC | 2 cut(s) | 414, 1358 |
| SlaI | CTCGAG | 3 cut(s) | 277, 603, 698 |
| SmlI | CTYRAG | 3 cut(s) | 277, 603, 698 |
| SmoI | CTYRAG | 3 cut(s) | 277, 603, 698 |
| Sse9I | AATT | 6 cut(s) | 102, 242, 328, 871, 1188, 1390 |
| StyD4I | CCNGG | 4 cut(s) | 332, 410, 1042, 1171 |
| StyI | CCWWGG | 3 cut(s) | 178, 1112, 1317 |
| TaaI | ACNGT | 4 cut(s) | 50, 418, 1137, 1232 |
| TaiI | ACGT | 3 cut(s) | 592, 687, 1579 |
| TaqI | TCGA | 6 cut(s) | 278, 385, 404, 604, 699, 1221 |
| TaqII | GACCGA | 1 cut(s) | 411 |
| TasI | AATT | 6 cut(s) | 102, 242, 328, 871, 1188, 1390 |
| TatI | WGTACW | 1 cut(s) | 1232 |
| TauI | GCSGC | 5 cut(s) | 622, 625, 717, 720, 1000 |
| TfiI | GAWTC | 2 cut(s) | 820, 1486 |
| Tru1I | TTAA | 3 cut(s) | 201, 1052, 1245 |
| Tru9I | TTAA | 3 cut(s) | 201, 1052, 1245 |
| TseFI | GTSAC | 1 cut(s) | 158 |
| TseI | GCWGC | 5 cut(s) | 596, 599, 691, 694, 1207 |
| Tsp45I | GTSAC | 1 cut(s) | 158 |
| TspDTI | ATGAA | 3 cut(s) | 267, 733, 1265 |
| TspGWI | ACGGA | 1 cut(s) | 967 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 292 |
| VpaK11BI | GGWCC | 2 cut(s) | 414, 1358 |
| XapI | RAATTY | 3 cut(s) | 242, 328, 1390 |
| XceI | RCATGY | 1 cut(s) | 166 |
| XhoI | CTCGAG | 3 cut(s) | 277, 603, 698 |
| ZraI | GACGTC | 2 cut(s) | 590, 685 |