Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0012597

Physical Location & Seq

Genomic Coordinates Reverse (-)

34347792 .. 34461065

Gene Structure 113274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0298000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2820 bp

ATGGATCGAGCCACTCAAGTATTACGGCTGCTCGTGTTAATCCCATTTTTTGTTATTGCAGCAGAGGGAACTGTTCAGGAGTATAATGCTATTATGATACTCAGGGATGAATGGGGCATAAACCCTCCAAGTTGGGTTGGTTCAGATCCTTGTGGCGACTGGGATGGTATTACTTGCACCAATTCACGGATCACTGCTTTAACATTGGCAGACATGGGTTTGAAAGGCGGCCTACCTAGTGACATCGAGACGTTATCTGAGCTACAGATTCTGAATCTGGCTTTCAACGAGGACCTGAAGGGACAACTTCAAGCATCAATTGGAAACTTGACCAAACTAAAAACCGTAATCCTGGATGGTTGCAGATTCTCTGGTCCTATTCCAGCTACAATAGGATCTTTAAAGCAACTTTCTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCGGACAACATGCTTGGGGATTCCATTCCAGTCTCTAATGGGACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCGGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGCCTCTGATACATTTGATTTTTGACAGAAATAATTTTACTGGCAGCATCCCTTCCACACTTGGACTTGTGAAAACTCTGGAGGCAGTACGCCTTGATAGAAATTCATTAAGTGGGCCTGTACCTACGAGCCTCAGAAATCTTACAAATGTGTCTGAACTGCACTTGTCCAACAATAAGCTGACTGGCCAGGTGCCCAACCTTACTCTCATGGATTCCCTCACCTATGTGGATATGAGCAATAATACTTTTGATGCGTCAGATATTCCTAATTGGTTTTCAACCTTGAAGTTCTTGACAACATTAATGATGGAAAACACAGGACTTCAGGGACAAGTCCCTCAAGCCCTTTTCAGCCTTCAAAATTTGGAGACAGTGATACTAAAGAACAACAGTCTCAATGGTACATTGGATATTGGAACCAATATTGGCAATCAATTGAACCTAATTGATCTGCAGAAGAACAACATTGCTGATCTTGCACCAATTGATGAGGGATCCAACTACACATTGATTCTAGTTGACAATCCAATTTGTGAGGGAAGTCAGAATAACATGGCAAAGAACTACTGTAATGGTTCTCCTACTAATTCCTCGATTTCAACTACACCAAGTAATTGTGCTGGCTGTAGTTCAGGCCAGGTTGCTTCCCCCAACTGTAAATGTGCATCTCCCTATACACGGACTCTAGTCTTCTCATTTGTTTCTTTCTCAAACTTGGATGACATCAATTATTACAAAGCTCTCTCAAACAATCTCACAAGATCTCTTCACTCCAAAAACCTTCCTGTGGATTCAGTTTCACTGAGTCATCCGAGCTGGAGCTCATCTTATCAACTTGAAATTATCATAGAAATTTTCCCATCTGGTGATCAAGTTAGCTTCAACCAAACAGAAAGTTCGGCGATTACATCTGTTCTTAGCAACCAGAGTCTAGAGGGACGTCCAAATTCTTTTGGACCCTACTCTTTTCTTGTTCTTTACACCAACTCTGGAGGATCAAACAAGGGCGTGATAATTGGAACGGCAATTGGTGGTTCTGTGCTCCTTTCATTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAGAAGAAGAAAGCAGATGAGTCAATGAGTACTGGATCGATCCTTTTGACAGGGATTCCAAATAGCAGTGCTAGTGGTCCTCAACTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACCGATGGTTTTTCAAAAGCAAAAGATATTGGATCTGGGGGTTATGGCCAGGTGTATAAGGGAATTCTTCCTACAGGCCAGATGGTTGCCATTAAAAGAGCTAAAAGGGAATCTATGCAGGGAGGAGTTGAGTTCAATGCCGAGGTTGAGCTCCTATCACGAGTACATCATAAGAATCTTGTTGGCCTTGTTGGTTTTTGTTTTGAACAAGGAGAACAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACAGCCTATCAGGGAAGTCCGGAATCAGGTTGGACTGGATGAGAAGACTTCAAGTAGCACTTGGTGCGGCGAGAGGTCTGGCATATCTTCATGAACTTGCAAGCCCAACCATTATACACCGGGACATCAAATCAAACAACATTCTGCTCGATAAAGATTTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCAATTGCTGATAGTGGAATGGACCACTTATCTACTCAAGTTAAGGGGACACTGGGCTACTTGGATCCTGAATATTATATGACTCAACAGTTGACTGACAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAATGCAAGGGAAATATATAGTGAGAGTGGTACATATGACAATGGATAAGTCGAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAAATGTTTGTGGATTTGGCAATGTCTTGTGTAGAAGAACTAGGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAAATCGCTGCTTTGAACGCCGGTACTAATCCATTGTCCACTTCAGCAAGTTATGAGGAAGAATATGACTGTAAGGACAGCACCGAGGATGTTTACAGCAGACCCTTTGATTATAGTGGAGCTTTTGACGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000120 GO:0000500 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005730 GO:0006355 GO:0006356 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045943 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEK_C SWIB

Protein Analysis

939

Amino Acids

102.05

Weight (kDa)

5.19

Isoelectric Point (pI)

33.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	623 - 888	1.9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	625 - 836	2.6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012597)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g30330
malus_domestica	MD03G1190700.v1.1 MD11G1207400.v1.1
prunus_persica	Prupe.4G228000_v2.0.a1
pyrus_communis	pycom03g14390 pycom11g18060
rosa_chinensis	RchiOBHm_Chr5g0056201
rosa_laevigata	RLG00000035063
rosa_multiflora	Rmu_co7981676.1_g000001 Rmu_sc0000680.1_g000024
rosa_roxburghii	Rroxscaffold_1G00024090
rosa_rugosa	Rorug05G0298000 Rorug05G0298100
rosa_samantha	Rh5AG369100 Rh5BG380200 Rh5CG403000 Rh5DG393200
rosa_wichuraiana	Rw0G004420 Rw0G012660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1585
AccB1I	GGYRCC	1 cut(s)	832
AccB7I	CCANNNNNTGG	1 cut(s)	2561
AccIII	TCCGGA	1 cut(s)	2132
AciI	CCGC	2 cut(s)	228, 2180
AcoI	YGGCCR	2 cut(s)	826, 1900
AcsI	RAATTY	5 cut(s)	742, 1003, 1494, 1588, 1917
AcuI	CTGAAG	3 cut(s)	317, 950, 2712
AcyI	GRCGYC	1 cut(s)	1582
AdeI	CACNNNGTG	1 cut(s)	2177
AfaI	GTAC	8 cut(s)	729, 762, 1045, 1756, 2019, 2499, 2531, 2710
AfiI	CCNNNNNNNGG	8 cut(s)	186, 464, 604, 1320, 1429, 2139, 2561, 2651
AflIII	ACRYGT	1 cut(s)	2415
AjiI	CACGTC	1 cut(s)	2416
AjnI	CCWGG	5 cut(s)	351, 547, 828, 1278, 1902
AjuI	GAANNNNNNNTTGG	2 cut(s)	442, 474
AleI	CACNNNNGTG	1 cut(s)	866
Alw21I	GWGCWC	4 cut(s)	1466, 1686, 1845, 2007
Alw26I	GTCTC	5 cut(s)	242, 535, 1004, 1040, 2303
AlwNI	CAGNNNCTG	1 cut(s)	271
Ama87I	CYCGRG	1 cut(s)	604
Aor13HI	TCCGGA	1 cut(s)	2132
AoxI	GGCC	8 cut(s)	229, 755, 826, 1276, 1900, 1930, 2038, 2462
ApeKI	GCWGC	5 cut(s)	28, 59, 609, 684, 2693
ApoI	RAATTY	5 cut(s)	742, 1003, 1494, 1588, 1917
AseI	ATTAAT	1 cut(s)	944
AspS9I	GGNCC	8 cut(s)	292, 374, 446, 493, 755, 1598, 1802, 2329
AsuC2I	CCSGG	1 cut(s)	2234
AsuHPI	GGTGA	4 cut(s)	853, 1520, 2114, 2674
AvaI	CYCGRG	1 cut(s)	604
AvaII	GGWCC	7 cut(s)	292, 374, 446, 493, 1598, 1802, 2329
BaeGI	GKGCMC	1 cut(s)	837
BalI	TGGCCA	2 cut(s)	828, 1902
BamHI	GGATCC	2 cut(s)	1136, 2371
BanI	GGYRCC	1 cut(s)	832
BanII	GRGCYC	3 cut(s)	1466, 1845, 2007
BauI	CACGAG	2 cut(s)	32, 2013
BbsI	GAAGAC	2 cut(s)	1324, 2164
Bbv12I	GWGCWC	4 cut(s)	1466, 1686, 1845, 2007
BbvI	GCAGC	5 cut(s)	15, 71, 621, 696, 2680
BccI	CCATC	6 cut(s)	158, 350, 943, 1510, 1853, 1930
BceAI	ACGGC	2 cut(s)	41, 1680
BciT130I	CCWGG	5 cut(s)	353, 549, 830, 1280, 1904
BclI	TGATCA	1 cut(s)	1510
BcnI	CCSGG	1 cut(s)	2234
BcoDI	GTCTC	5 cut(s)	242, 535, 1004, 1040, 2303
BfaI	CTAG	8 cut(s)	237, 473, 1157, 1328, 1574, 1797, 2457, 2630
BfmI	CTRYAG	4 cut(s)	263, 1094, 1267, 1926
BglII	AGATCT	1 cut(s)	1403
BisI	GCNGC	7 cut(s)	29, 60, 229, 610, 685, 2181, 2694
BlsI	GCNGC	7 cut(s)	30, 61, 230, 611, 686, 2182, 2695
BmcAI	AGTACT	1 cut(s)	1756
Bme1390I	CCNGG	6 cut(s)	353, 549, 830, 1280, 1904, 2234
Bme18I	GGWCC	7 cut(s)	292, 374, 446, 493, 1598, 1802, 2329
BmeT110I	CYCGRG	1 cut(s)	604
BmgBI	CACGTC	1 cut(s)	2416
BmgT120I	GGNCC	8 cut(s)	292, 374, 446, 493, 755, 1598, 1802, 2329
BmiI	GGNNCC	5 cut(s)	834, 1060, 1138, 1600, 2373
BmrFI	CCNGG	6 cut(s)	353, 549, 830, 1280, 1904, 2234
BmrI	ACTGGG	2 cut(s)	169, 2369
BmsI	GCATC	4 cut(s)	323, 696, 883, 1316
BmuI	ACTGGG	2 cut(s)	169, 2369
BoxI	GACNNNNGTC	1 cut(s)	1328
BpiI	GAAGAC	2 cut(s)	1324, 2164
BpmI	CTGGAG	3 cut(s)	740, 1480, 1653
BpuEI	CTTGAG	3 cut(s)	966, 1829, 2328
BpuMI	CCSGG	1 cut(s)	2234
Bsa29I	ATCGAT	1 cut(s)	1763
BsaHI	GRCGYC	1 cut(s)	1582
BsaI	GGTCTC	1 cut(s)	2303
BsaJI	CCNNGG	2 cut(s)	1995, 2769
BsaWI	WCCGGW	1 cut(s)	2132
Bsc4I	CCNNNNNNNGG	8 cut(s)	186, 464, 604, 1320, 1429, 2139, 2561, 2651
Bse118I	RCCGGY	1 cut(s)	2705
Bse1I	ACTGG	7 cut(s)	164, 527, 685, 829, 1762, 2153, 2364
Bse3DI	GCAATG	2 cut(s)	1107, 2616
BseAI	TCCGGA	1 cut(s)	2132
BseBI	CCWGG	5 cut(s)	353, 549, 830, 1280, 1904
BseCI	ATCGAT	1 cut(s)	1763
BseDI	CCNNGG	2 cut(s)	1995, 2769
BseGI	GGATG	8 cut(s)	112, 169, 361, 687, 1366, 1450, 2157, 2779
BseLI	CCNNNNNNNGG	8 cut(s)	186, 464, 604, 1320, 1429, 2139, 2561, 2651
BseMI	GCAATG	2 cut(s)	1107, 2616
BseMII	CTCAG	4 cut(s)	115, 249, 787, 1436
BseNI	ACTGG	7 cut(s)	164, 527, 685, 829, 1762, 2153, 2364
BseRI	GAGGAG	1 cut(s)	1992
BseSI	GKGCMC	1 cut(s)	837
BseXI	GCAGC	5 cut(s)	15, 71, 621, 696, 2680
BsgI	GTGCAG	2 cut(s)	528, 785
BshFI	GGCC	8 cut(s)	231, 757, 828, 1278, 1902, 1932, 2040, 2464
BshNI	GGYRCC	1 cut(s)	832
BshVI	ATCGAT	1 cut(s)	1763
BsiHKAI	GWGCWC	4 cut(s)	1466, 1686, 1845, 2007
BsiHKCI	CYCGRG	1 cut(s)	604
BsiSI	CCGG	3 cut(s)	2133, 2233, 2706
BslFI	GGGAC	8 cut(s)	315, 553, 962, 984, 1593, 2126, 2249, 2368
BslI	CCNNNNNNNGG	8 cut(s)	186, 464, 604, 1320, 1429, 2139, 2561, 2651
BsmAI	GTCTC	5 cut(s)	242, 535, 1004, 1040, 2303
BsmBI	CGTCTC	1 cut(s)	242
BsmFI	GGGAC	8 cut(s)	315, 553, 962, 984, 1593, 2126, 2249, 2368
BsmI	GAATGC	1 cut(s)	612
BsnI	GGCC	8 cut(s)	231, 757, 828, 1278, 1902, 1932, 2040, 2464
Bso31I	GGTCTC	1 cut(s)	2303
BsoBI	CYCGRG	1 cut(s)	604
Bsp1286I	GDGCHC	5 cut(s)	837, 1466, 1686, 1845, 2007
Bsp13I	TCCGGA	1 cut(s)	2132
Bsp1407I	TGTACA	1 cut(s)	2529
BspACI	CCGC	2 cut(s)	228, 2180
BspANI	GGCC	8 cut(s)	231, 757, 828, 1278, 1902, 1932, 2040, 2464
BspCNI	CTCAG	4 cut(s)	114, 250, 786, 1437
BspDI	ATCGAT	1 cut(s)	1763
BspEI	TCCGGA	1 cut(s)	2132
BspHI	TCATGA	1 cut(s)	2203
BspLI	GGNNCC	5 cut(s)	834, 1060, 1138, 1600, 2373
BspMAI	CTGCAG	1 cut(s)	1098
BspQI	GCTCTTC	1 cut(s)	1833
BspT107I	GGYRCC	1 cut(s)	832
BspTNI	GGTCTC	1 cut(s)	2303
BsrDI	GCAATG	2 cut(s)	1107, 2616
BsrFI	RCCGGY	1 cut(s)	2705
BsrGI	TGTACA	1 cut(s)	2529
BsrI	ACTGG	7 cut(s)	164, 527, 685, 829, 1762, 2153, 2364
BssAI	RCCGGY	1 cut(s)	2705
BssECI	CCNNGG	2 cut(s)	1995, 2769
BssNI	GRCGYC	1 cut(s)	1582
BssSI	CACGAG	2 cut(s)	32, 2013
Bst2BI	CACGAG	2 cut(s)	32, 2013
Bst2UI	CCWGG	5 cut(s)	353, 549, 830, 1280, 1904
Bst4CI	ACNGT	9 cut(s)	73, 346, 627, 1015, 1034, 1211, 1298, 2397, 2756
Bst6I	CTCTTC	2 cut(s)	1413, 1833
BstACI	GRCGYC	1 cut(s)	1582
BstAPI	GCANNNNNTGC	2 cut(s)	2177, 2285
BstAUI	TGTACA	1 cut(s)	2529
BstC8I	GCNNGC	2 cut(s)	1264, 2215
BstDEI	CTNAG	5 cut(s)	101, 258, 773, 1445, 1559
BstF5I	GGATG	8 cut(s)	112, 169, 361, 687, 1366, 1450, 2157, 2779
BstMAI	GTCTC	5 cut(s)	242, 535, 1004, 1040, 2303
BstMWI	GCNNNNNNNGC	5 cut(s)	1118, 2177, 2285, 2470, 2702
BstNI	CCWGG	5 cut(s)	353, 549, 830, 1280, 1904
BstNSI	RCATGY	1 cut(s)	511
BstPAI	GACNNNNGTC	1 cut(s)	1328
BstSCI	CCNGG	6 cut(s)	351, 547, 828, 1278, 1902, 2232
BstSFI	CTRYAG	4 cut(s)	263, 1094, 1267, 1926
BstSLI	GKGCMC	1 cut(s)	837
BstV1I	GCAGC	5 cut(s)	15, 71, 621, 696, 2680
BstV2I	GAAGAC	2 cut(s)	1324, 2164
BstX2I	RGATCY	6 cut(s)	145, 395, 1136, 1403, 1886, 2371
BstYI	RGATCY	6 cut(s)	145, 395, 1136, 1403, 1886, 2371
Bsu15I	ATCGAT	1 cut(s)	1763
BsuRI	GGCC	8 cut(s)	231, 757, 828, 1278, 1902, 1932, 2040, 2464
BsuTUI	ATCGAT	1 cut(s)	1763
BtrI	CACGTC	1 cut(s)	2416
BtsCI	GGATG	8 cut(s)	112, 169, 361, 687, 1366, 1450, 2157, 2779
BtsI	GCAGTG	2 cut(s)	192, 1798
BtsIMutI	CAGTG	5 cut(s)	192, 1020, 1442, 1798, 2357
Cac8I	GCNNGC	2 cut(s)	1264, 2215
CaiI	CAGNNNCTG	1 cut(s)	271
CciI	TCATGA	1 cut(s)	2203
Cfr10I	RCCGGY	1 cut(s)	2705
Cfr13I	GGNCC	8 cut(s)	292, 374, 446, 493, 755, 1598, 1802, 2329
ClaI	ATCGAT	1 cut(s)	1763
CseI	GACGC	1 cut(s)	885
CsiI	ACCWGGT	1 cut(s)	547
Csp6I	GTAC	8 cut(s)	728, 761, 1044, 1755, 2018, 2498, 2530, 2709
CviAII	CATG	5 cut(s)	214, 508, 850, 1195, 2204
CviQI	GTAC	8 cut(s)	728, 761, 1044, 1755, 2018, 2498, 2530, 2709
DdeI	CTNAG	5 cut(s)	101, 258, 773, 1445, 1559
DraI	TTTAAA	2 cut(s)	402, 2274
DraIII	CACNNNGTG	1 cut(s)	2177
EaeI	YGGCCR	2 cut(s)	826, 1900
Eam1104I	CTCTTC	2 cut(s)	1413, 1833
EarI	CTCTTC	2 cut(s)	1413, 1833
Ecl136II	GAGCTC	3 cut(s)	1464, 1843, 2005
Eco24I	GRGCYC	3 cut(s)	1466, 1845, 2007
Eco31I	GGTCTC	1 cut(s)	2303
Eco47I	GGWCC	7 cut(s)	292, 374, 446, 493, 1598, 1802, 2329
Eco53kI	GAGCTC	3 cut(s)	1464, 1843, 2005
Eco57I	CTGAAG	3 cut(s)	317, 950, 2712
Eco88I	CYCGRG	1 cut(s)	604
EcoICRI	GAGCTC	3 cut(s)	1464, 1843, 2005
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	1917
EcoRII	CCWGG	5 cut(s)	351, 547, 828, 1278, 1902
EcoT38I	GRGCYC	3 cut(s)	1466, 1845, 2007
Esp3I	CGTCTC	1 cut(s)	242
FaeI	CATG	5 cut(s)	217, 511, 853, 1198, 2207
FalI	AAGNNNNNCTT	2 cut(s)	2157, 2189
FaqI	GGGAC	8 cut(s)	315, 553, 962, 984, 1593, 2126, 2249, 2368
FatI	CATG	5 cut(s)	213, 507, 849, 1194, 2203
FauNDI	CATATG	1 cut(s)	2502
FbaI	TGATCA	1 cut(s)	1510
Fnu4HI	GCNGC	7 cut(s)	29, 60, 229, 610, 685, 2181, 2694
FokI	GGATG	8 cut(s)	119, 176, 368, 674, 1373, 1437, 2164, 2786
FriOI	GRGCYC	3 cut(s)	1466, 1845, 2007
Fsp4HI	GCNGC	7 cut(s)	29, 60, 229, 610, 685, 2181, 2694
FspBI	CTAG	8 cut(s)	237, 473, 1157, 1328, 1574, 1797, 2457, 2630
GluI	GCNGC	7 cut(s)	29, 60, 229, 610, 685, 2181, 2694
GsuI	CTGGAG	3 cut(s)	740, 1480, 1653
HaeIII	GGCC	8 cut(s)	231, 757, 828, 1278, 1902, 1932, 2040, 2464
HapII	CCGG	3 cut(s)	2133, 2233, 2706
HgaI	GACGC	1 cut(s)	885
Hin1I	GRCGYC	1 cut(s)	1582
Hin1II	CATG	5 cut(s)	217, 511, 853, 1198, 2207
HincII	GTYRAC	2 cut(s)	1162, 2400
HindII	GTYRAC	2 cut(s)	1162, 2400
HpaII	CCGG	3 cut(s)	2133, 2233, 2706
HphI	GGTGA	4 cut(s)	853, 1520, 2114, 2674
Hpy166II	GTNNAC	4 cut(s)	1162, 2400, 2724, 2779
Hpy8I	GTNNAC	4 cut(s)	1162, 2400, 2724, 2779
Hpy99I	CGWCG	1 cut(s)	2417
HpyAV	CCTTC	6 cut(s)	292, 468, 702, 1007, 1433, 2454
HpyCH4III	ACNGT	9 cut(s)	73, 346, 627, 1015, 1034, 1211, 1298, 2397, 2756
HpyCH4IV	ACGT	3 cut(s)	251, 1582, 2415
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1118, 2177, 2285, 2470, 2702
HpyF3I	CTNAG	5 cut(s)	101, 258, 773, 1445, 1559
HpySE526I	ACGT	3 cut(s)	251, 1582, 2415
Hsp92I	GRCGYC	1 cut(s)	1582
Hsp92II	CATG	5 cut(s)	217, 511, 853, 1198, 2207
Kpn2I	TCCGGA	1 cut(s)	2132
Ksp22I	TGATCA	1 cut(s)	1510
LguI	GCTCTTC	1 cut(s)	1833
LmnI	GCTCC	6 cut(s)	1461, 1689, 1817, 2010, 2443, 2804
Lsp1109I	GCAGC	5 cut(s)	15, 71, 621, 696, 2680
LweI	GCATC	4 cut(s)	323, 696, 883, 1316
MabI	ACCWGGT	1 cut(s)	547
MaeI	CTAG	8 cut(s)	237, 473, 1157, 1328, 1574, 1797, 2457, 2630
MaeII	ACGT	3 cut(s)	251, 1582, 2415
MaeIII	GTNAC	1 cut(s)	239
MfeI	CAATTG	5 cut(s)	318, 1076, 1125, 1668, 2310
MflI	RGATCY	6 cut(s)	145, 395, 1136, 1403, 1886, 2371
MhlI	GDGCHC	5 cut(s)	837, 1466, 1686, 1845, 2007
MlsI	TGGCCA	2 cut(s)	828, 1902
MluNI	TGGCCA	2 cut(s)	828, 1902
MlyI	GAGTC	5 cut(s)	1318, 1456, 1579, 1754, 2383
MmeI	TCCRAC	4 cut(s)	834, 1164, 2124, 2421
Mox20I	TGGCCA	2 cut(s)	828, 1902
MroI	TCCGGA	1 cut(s)	2132
MscI	TGGCCA	2 cut(s)	828, 1902
MseI	TTAA	9 cut(s)	38, 200, 401, 563, 749, 944, 1947, 2273, 2349
MslI	CAYNNNNRTG	1 cut(s)	866
Msp20I	TGGCCA	2 cut(s)	828, 1902
MspI	CCGG	3 cut(s)	2133, 2233, 2706
MspR9I	CCNGG	6 cut(s)	353, 549, 830, 1280, 1904, 2234
MunI	CAATTG	5 cut(s)	318, 1076, 1125, 1668, 2310
Mva1269I	GAATGC	1 cut(s)	612
MvaI	CCWGG	5 cut(s)	353, 549, 830, 1280, 1904
MwoI	GCNNNNNNNGC	5 cut(s)	1118, 2177, 2285, 2470, 2702
NciI	CCSGG	1 cut(s)	2234
NdeI	CATATG	1 cut(s)	2502
NlaIII	CATG	5 cut(s)	217, 511, 853, 1198, 2207
NlaIV	GGNNCC	5 cut(s)	834, 1060, 1138, 1600, 2373
NmeAIII	GCCGAG	1 cut(s)	2020
NmuCI	GTSAC	1 cut(s)	239
NspI	RCATGY	1 cut(s)	511
OliI	CACNNNNGTG	1 cut(s)	866
PagI	TCATGA	1 cut(s)	2203
PciSI	GCTCTTC	1 cut(s)	1833
PctI	GAATGC	1 cut(s)	612
PflMI	CCANNNNNTGG	1 cut(s)	2561
PfoI	TCCNGGA	1 cut(s)	351
PkrI	GCNGC	7 cut(s)	30, 61, 230, 611, 686, 2182, 2695
PleI	GAGTC	5 cut(s)	1318, 1455, 1578, 1753, 2383
PpsI	GAGTC	5 cut(s)	1318, 1455, 1578, 1753, 2383
PpuMI	RGGWCCY	1 cut(s)	292
PshAI	GACNNNNGTC	1 cut(s)	1328
PshBI	ATTAAT	1 cut(s)	944
Psp124BI	GAGCTC	3 cut(s)	1466, 1845, 2007
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	5 cut(s)	351, 547, 828, 1278, 1902
PspGI	CCWGG	5 cut(s)	351, 547, 828, 1278, 1902
PspN4I	GGNNCC	5 cut(s)	834, 1060, 1138, 1600, 2373
PspPI	GGNCC	8 cut(s)	292, 374, 446, 493, 755, 1598, 1802, 2329
PspPPI	RGGWCCY	1 cut(s)	292
PstI	CTGCAG	1 cut(s)	1098
PstNI	CAGNNNCTG	1 cut(s)	271
PsuI	RGATCY	6 cut(s)	145, 395, 1136, 1403, 1886, 2371
RsaI	GTAC	8 cut(s)	729, 762, 1045, 1756, 2019, 2499, 2531, 2710
RsaNI	GTAC	8 cut(s)	728, 761, 1044, 1755, 2018, 2498, 2530, 2709
RseI	CAYNNNNRTG	1 cut(s)	866
SacI	GAGCTC	3 cut(s)	1466, 1845, 2007
SapI	GCTCTTC	1 cut(s)	1833
SaqAI	TTAA	9 cut(s)	38, 200, 401, 563, 749, 944, 1947, 2273, 2349
SatI	GCNGC	7 cut(s)	29, 60, 229, 610, 685, 2181, 2694
Sau96I	GGNCC	8 cut(s)	292, 374, 446, 493, 755, 1598, 1802, 2329
ScaI	AGTACT	1 cut(s)	1756
SchI	GAGTC	5 cut(s)	1318, 1456, 1579, 1754, 2383
ScrFI	CCNGG	6 cut(s)	353, 549, 830, 1280, 1904, 2234
SduI	GDGCHC	5 cut(s)	837, 1466, 1686, 1845, 2007
SexAI	ACCWGGT	1 cut(s)	547
SfaNI	GCATC	4 cut(s)	323, 696, 883, 1316
SfcI	CTRYAG	4 cut(s)	263, 1094, 1267, 1926
SinI	GGWCC	7 cut(s)	292, 374, 446, 493, 1598, 1802, 2329
SmiI	ATTTAAAT	1 cut(s)	2274
SmiMI	CAYNNNNRTG	1 cut(s)	866
SmlI	CTYRAG	4 cut(s)	15, 981, 1844, 2343
SmoI	CTYRAG	4 cut(s)	15, 981, 1844, 2343
SsiI	CCGC	2 cut(s)	228, 2180
SspI	AATATT	3 cut(s)	1066, 2076, 2381
SspMI	CTAG	8 cut(s)	237, 473, 1157, 1328, 1574, 1797, 2457, 2630
SstI	GAGCTC	3 cut(s)	1466, 1845, 2007
StyD4I	CCNGG	6 cut(s)	351, 547, 828, 1278, 1902, 2232
SwaI	ATTTAAAT	1 cut(s)	2274
TaaI	ACNGT	9 cut(s)	73, 346, 627, 1015, 1034, 1211, 1298, 2397, 2756
TaiI	ACGT	3 cut(s)	254, 1585, 2418
TaqI	TCGA	6 cut(s)	7, 246, 1235, 1763, 2262, 2519
TatI	WGTACW	3 cut(s)	1754, 2017, 2529
TauI	GCSGC	2 cut(s)	231, 2183
Tru1I	TTAA	9 cut(s)	38, 200, 401, 563, 749, 944, 1947, 2273, 2349
Tru9I	TTAA	9 cut(s)	38, 200, 401, 563, 749, 944, 1947, 2273, 2349
TscAI	CASTG	5 cut(s)	199, 1020, 1449, 1798, 2364
TseFI	GTSAC	1 cut(s)	239
TseI	GCWGC	5 cut(s)	28, 59, 609, 684, 2693
Tsp45I	GTSAC	1 cut(s)	239
TspDTI	ATGAA	7 cut(s)	123, 572, 735, 1680, 2192, 2220, 2548
TspGWI	ACGGA	2 cut(s)	202, 1336
TspRI	CASTG	5 cut(s)	199, 1020, 1449, 1798, 2364
Van91I	CCANNNNNTGG	1 cut(s)	2561
VpaK11BI	GGWCC	7 cut(s)	292, 374, 446, 493, 1598, 1802, 2329
VspI	ATTAAT	1 cut(s)	944
XapI	RAATTY	5 cut(s)	742, 1003, 1494, 1588, 1917
XbaI	TCTAGA	1 cut(s)	1573
XceI	RCATGY	1 cut(s)	511
XspI	CTAG	8 cut(s)	237, 473, 1157, 1328, 1574, 1797, 2457, 2630
ZraI	GACGTC	1 cut(s)	1583
ZrmI	AGTACT	1 cut(s)	1756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.