transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30420 AT2G30424 AT2G30424 AT2G30424 AT2G30432 AT5G53200 |
| fragaria_vesca | FvH4_5g04380 FvH4_7g31070 FvH4_7g31070 FvH4_7g31070 FvH4_7g31070 |
| malus_domestica | MD01G1215600.v1.1 MD06G1104200.v1.1 MD07G1285700.v1.1 |
| prunus_persica | Prupe.2G307600_v2.0.a1 |
| pyrus_communis | pycom06g09900 |
| rosa_chinensis | RchiOBHm_Chr1g0380141 RchiOBHm_Chr7g0195181 |
| rosa_laevigata | RLG00000026327 |
| rosa_multiflora | Rmu_sc0001232.1_g000017 Rmu_sc0002381.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00260690 Rroxscaffold_4G00279640 |
| rosa_rugosa | Rorug01G0418000 Rorug01G0418100 |
| rosa_samantha | Rh1AG443100 Rh1BG398000 Rh1CG411500 Rh1DG428800 Rh7BG149900 Rh7CG153400 |
| rosa_wichuraiana | Rw1G038470 Rw7G012700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 277 |
| AciI | CCGC | 1 cut(s) | 275 |
| AcuI | CTGAAG | 1 cut(s) | 72 |
| AluBI | AGCT | 1 cut(s) | 158 |
| AluI | AGCT | 1 cut(s) | 158 |
| Alw26I | GTCTC | 1 cut(s) | 205 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuC2I | CCSGG | 1 cut(s) | 171 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BclI | TGATCA | 1 cut(s) | 43 |
| BcnI | CCSGG | 1 cut(s) | 171 |
| BcoDI | GTCTC | 1 cut(s) | 205 |
| BfmI | CTRYAG | 1 cut(s) | 115 |
| BglII | AGATCT | 1 cut(s) | 106 |
| Bme1390I | CCNGG | 1 cut(s) | 171 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 1 cut(s) | 168 |
| BmrFI | CCNGG | 1 cut(s) | 171 |
| BoxI | GACNNNNGTC | 1 cut(s) | 9 |
| BpuMI | CCSGG | 1 cut(s) | 171 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| Bsh1236I | CGCG | 1 cut(s) | 277 |
| BsiSI | CCGG | 1 cut(s) | 170 |
| BsmAI | GTCTC | 1 cut(s) | 205 |
| Bsp143I | GATC | 2 cut(s) | 43, 106 |
| BspACI | CCGC | 1 cut(s) | 275 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspFNI | CGCG | 1 cut(s) | 277 |
| BspLI | GGNNCC | 1 cut(s) | 168 |
| BssMI | GATC | 2 cut(s) | 43, 106 |
| Bst6I | CTCTTC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstFNI | CGCG | 1 cut(s) | 277 |
| BstKTI | GATC | 2 cut(s) | 46, 109 |
| BstMAI | GTCTC | 1 cut(s) | 205 |
| BstMBI | GATC | 2 cut(s) | 43, 106 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 9 |
| BstSCI | CCNGG | 1 cut(s) | 169 |
| BstSFI | CTRYAG | 1 cut(s) | 115 |
| BstUI | CGCG | 1 cut(s) | 277 |
| BstX2I | RGATCY | 1 cut(s) | 106 |
| BstYI | RGATCY | 1 cut(s) | 106 |
| BtsI | GCAGTG | 1 cut(s) | 73 |
| BtsIMutI | CAGTG | 2 cut(s) | 73, 295 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CseI | GACGC | 1 cut(s) | 266 |
| CviJI | RGCY | 1 cut(s) | 158 |
| CviKI_1 | RGCY | 1 cut(s) | 158 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 2 cut(s) | 45, 108 |
| DpnII | GATC | 2 cut(s) | 43, 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 48 |
| EarI | CTCTTC | 1 cut(s) | 48 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 1 cut(s) | 72 |
| FaiI | YATR | 5 cut(s) | 87, 89, 117, 126, 249 |
| FauNDI | CATATG | 1 cut(s) | 87 |
| FbaI | TGATCA | 1 cut(s) | 43 |
| HapII | CCGG | 1 cut(s) | 170 |
| HgaI | GACGC | 1 cut(s) | 266 |
| HpaII | CCGG | 1 cut(s) | 170 |
| Hpy188I | TCNGA | 4 cut(s) | 18, 43, 52, 137 |
| Hpy99I | CGWCG | 2 cut(s) | 18, 282 |
| HpyAV | CCTTC | 1 cut(s) | 234 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| Ksp22I | TGATCA | 1 cut(s) | 43 |
| Kzo9I | GATC | 2 cut(s) | 43, 106 |
| LpnPI | CCDG | 2 cut(s) | 144, 183 |
| MalI | GATC | 2 cut(s) | 45, 108 |
| MboI | GATC | 2 cut(s) | 43, 106 |
| MboII | GAAGA | 3 cut(s) | 65, 113, 116 |
| MflI | RGATCY | 1 cut(s) | 106 |
| MluCI | AATT | 2 cut(s) | 188, 267 |
| MmeI | TCCRAC | 1 cut(s) | 115 |
| MnlI | CCTC | 3 cut(s) | 49, 189, 214 |
| MseI | TTAA | 1 cut(s) | 152 |
| MslI | CAYNNNNRTG | 2 cut(s) | 86, 90 |
| MspI | CCGG | 1 cut(s) | 170 |
| MspR9I | CCNGG | 1 cut(s) | 171 |
| MvnI | CGCG | 1 cut(s) | 277 |
| NciI | CCSGG | 1 cut(s) | 171 |
| NdeI | CATATG | 1 cut(s) | 87 |
| NdeII | GATC | 2 cut(s) | 43, 106 |
| NlaIV | GGNNCC | 1 cut(s) | 168 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 19 |
| PshAI | GACNNNNGTC | 1 cut(s) | 9 |
| PspN4I | GGNNCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PsuI | RGATCY | 1 cut(s) | 106 |
| RseI | CAYNNNNRTG | 2 cut(s) | 86, 90 |
| SaqAI | TTAA | 1 cut(s) | 152 |
| Sau3AI | GATC | 2 cut(s) | 43, 106 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 171 |
| SetI | ASST | 5 cut(s) | 60, 146, 160, 200, 225 |
| SfcI | CTRYAG | 1 cut(s) | 115 |
| SgeI | CNNG | 7 cut(s) | 110, 143, 171, 176, 182, 183, 288 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 86, 90 |
| Sse9I | AATT | 2 cut(s) | 188, 267 |
| SsiI | CCGC | 1 cut(s) | 275 |
| StyD4I | CCNGG | 1 cut(s) | 169 |
| TaqI | TCGA | 2 cut(s) | 175, 280 |
| TaqII | GACCGA | 1 cut(s) | 21 |
| TasI | AATT | 2 cut(s) | 188, 267 |
| Tru1I | TTAA | 1 cut(s) | 152 |
| Tru9I | TTAA | 1 cut(s) | 152 |
| TscAI | CASTG | 2 cut(s) | 73, 295 |
| TspDTI | ATGAA | 2 cut(s) | 70, 74 |
| TspRI | CASTG | 2 cut(s) | 73, 295 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |