Rmu_sc0001665.1_g000047

Histone deacetylase HDT1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001665.1
OG0002833
Physical Location & Seq
Reverse (-)
193750 .. 198778
5029 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2184 bp
atgtcaccattttgccctaactgtgaccgagaacctgagttttggggtgctgaattgaaatctggcgagaagttgaaagtgaagccagatgccggcgtggttttgcatctcacacaggcatgtgtgggcttaaatcaaagatgtcatggtgtcgtttatgtgagcatcggggaagagagaagagtcttgggaagtctcttgccaccaagagtacctcaattttcctgcgatctggtctttgaccaagaatttctgctttcacacaacttggagatgggaagcgtcttctttgccgtaactactgattataattgtattgtctctggatttttctgcttagtaactgtttccttgaccacaattgctgtgttgtgttctgtcactaagcttgaggaaacaaagcaaactacaagtaagaccaaatcttctgatgagaatccaatctttgaggaaaagagagagcctcttaggcaagcaaggccagcaatagggaagaccagatcttctgttaagaatccagtcattgaggaaaatagagtacctattgacaaagctgactttgttgtgcgcccactggtggtgagaaggccagagaacataagtaaggagctcgaattctatagaactatttttgaggctgaaccgattgctggcccccagattgggtctgaaagatcacacgagttcaagattggaaataattcattatatgttgttgctgcttcgactattgaggaacttgagcctcttgggcctgctctttgtgtggagacgggagatgtagcaacttttattgagaaagcgaaaaatgctgggtgggagtgctccgtccttgaaaggtatcggcccaatatcacgccagatgataagttgagtggcactagaatgagaactaaattcggtcagatctgttacatctgtcagacaccccaaacaagaaacaatgtagaagaagagcagcaaacaaaaattaagtccatatgccctacaatgctattttatgaagatgagtttgatgaggcagttgcaaattatgaggctgttttcggaaggtctcagggctcgttctttcagttgttccggagacgatctacctctttttcagactgcctctatgctgcagccaaggataggggtattggcagttctacatgtctctgcatagagccggaggatattgtcattttcatggagtcgttctttaatttgaagtcatccgtagatttcttctatctcaattgtgaagtggttctacatgactggggaaagacagttgtgagattgatatctcctaagtgtagtcacactctttatgtgtacagcagcaagccattattgactgtgctctcatgtaacgtaaagcatggtgctatacagccactgattcagttccttggctcagtcagtcaagtaaaatgggtcaaaatccatgtagatgaaattcctcgttgcttgtccttcccttacccggatttgctgattattggtgatgagaagatacttactcttgagaggatggaaaaaaaattgtcttcaaggaagtcggataccaagatattgcaggttcatgggcaaccagtatcagaagacatgaaaagattgttgaacaggcatgaagcaaaatatctttgcactgcaaagtttttctatgcaagttcaagtcctgatgtctcaaaacttccgagcctcatcgacaaacaatgcgttgtgttgatgatcaagaccagacccaccatagccgccactccaagcacggccatcacagcgcggttgtcaaccggaaacccgaacaccaaaacaaagtactctccattgcttccctcaccttctcactccgaaaaccagagagccagcagaagaagaagcagagcggcttcagggtttaggaatcagattagtaggcgtgaggagcaatggcatgcaacagcaccggtgaagccgctgctgcacaacttcctgctattgttcttgaaatgggggagcaagaaccacactaataccaaccattgctactgccgccccgtctccgccgagcctcaaaccctttcgaagtcgacgaattttgaggaggagagtgacgatgacggtaaggctggatcaattgagcgattgtgctactggaagcggaggttggagaggagaaatctggaggccacagctttcggggtggggctttttggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

727

Amino Acids

82.03

Weight (kDa)

8.5

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPL PF17800 14 - 88 6.2e-10 Nucleoplasmin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 309
Acc36I ACCTGC 1 cut(s) 1552
AccBSI CCGCTC 1 cut(s) 1871
AccI GTMKAC 1 cut(s) 2054
AccII CGCG 1 cut(s) 1768
AccIII TCCGGA 1 cut(s) 1080
AciI CCGC 7 cut(s) 1740, 1768, 1871, 1940, 2017, 2028, 2125
AclWI GGATC 1 cut(s) 2104
AcoI YGGCCR 1 cut(s) 1755
AcsI RAATTY 5 cut(s) 248, 614, 896, 1440, 2059
AcuI CTGAAG 1 cut(s) 1860
AfaI GTAC 4 cut(s) 213, 540, 1319, 1805
AfiI CCNNNNNNNGG 8 cut(s) 92, 488, 577, 650, 662, 663, 1131, 1468
AflIII ACRYGT 1 cut(s) 1151
AgeI ACCGGT 1 cut(s) 1930
AgsI TTSAA 9 cut(s) 58, 76, 688, 836, 1210, 1536, 1606, 1659, 1972
AjuI GAANNNNNNNTTGG 2 cut(s) 2114, 2146
AluBI AGCT 4 cut(s) 388, 554, 610, 2159
AluI AGCT 4 cut(s) 388, 554, 610, 2159
Alw21I GWGCWC 3 cut(s) 612, 827, 1347
Alw26I GTCTC 8 cut(s) 200, 325, 764, 1059, 1078, 1160, 1675, 2029
AlwI GGATC 1 cut(s) 2104
AlwNI CAGNNNCTG 1 cut(s) 1381
Aor13HI TCCGGA 1 cut(s) 1080
AoxI GGCC 7 cut(s) 479, 587, 652, 752, 845, 1755, 2151
ApeKI GCWGC 7 cut(s) 719, 958, 1118, 1121, 1323, 1942, 1945
ApoI RAATTY 5 cut(s) 248, 614, 896, 1440, 2059
ArsI GACNNNNNNTTYG 2 cut(s) 959, 991
AsiGI ACCGGT 1 cut(s) 1930
Asp700I GAANNNNTTC 2 cut(s) 700, 1248
AspLEI GCGC 2 cut(s) 570, 1768
AspS9I GGNCC 3 cut(s) 653, 752, 846
AsuC2I CCSGG 1 cut(s) 1469
AsuHPI GGTGA 4 cut(s) 592, 1499, 1815, 1945
AsuII TTCGAA 1 cut(s) 2048
BanII GRGCYC 2 cut(s) 612, 1064
BarI GAAGNNNNNNTAC 2 cut(s) 1236, 1268
BauI CACGAG 1 cut(s) 680
BbsI GAAGAC 4 cut(s) 277, 500, 1524, 1593
Bbv12I GWGCWC 3 cut(s) 612, 827, 1347
BbvI GCAGC 7 cut(s) 706, 970, 1105, 1133, 1335, 1929, 1932
BccI CCATC 3 cut(s) 268, 1510, 1766
BceAI ACGGC 2 cut(s) 278, 1770
BciVI GTATCC 1 cut(s) 1540
BclI TGATCA 1 cut(s) 1716
BcnI CCSGG 1 cut(s) 1469
BcoDI GTCTC 8 cut(s) 200, 325, 764, 1059, 1078, 1160, 1675, 2029
BfaI CTAG 1 cut(s) 882
BfmI CTRYAG 2 cut(s) 619, 1119
BfuAI ACCTGC 1 cut(s) 1552
BfuI GTATCC 1 cut(s) 1540
BglI GCCNNNNNGGC 2 cut(s) 469, 751
BglII AGATCT 2 cut(s) 500, 906
BmcAI AGTACT 1 cut(s) 1805
Bme1390I CCNGG 1 cut(s) 1469
BmgT120I GGNCC 3 cut(s) 653, 752, 846
BmiI GGNNCC 1 cut(s) 655
BmrFI CCNGG 1 cut(s) 1469
BmrI ACTGGG 1 cut(s) 1270
BmsI GCATC 3 cut(s) 79, 115, 174
BmuI ACTGGG 1 cut(s) 1270
BpiI GAAGAC 4 cut(s) 277, 500, 1524, 1593
BplI GAGNNNNNCTC 2 cut(s) 448, 480
BpmI CTGGAG 1 cut(s) 2168
Bpu14I TTCGAA 1 cut(s) 2048
BpuEI CTTGAG 3 cut(s) 410, 761, 1529
BpuMI CCSGG 1 cut(s) 1469
BsaBI GATNNNNATC 2 cut(s) 435, 1285
BsaI GGTCTC 1 cut(s) 1059
BsaJI CCNNGG 2 cut(s) 1125, 1393
BsaWI WCCGGW 3 cut(s) 1080, 1778, 1930
Bsc4I CCNNNNNNNGG 8 cut(s) 92, 488, 577, 650, 662, 663, 1131, 1468
Bse118I RCCGGY 2 cut(s) 92, 1930
Bse1I ACTGG 5 cut(s) 518, 579, 1265, 1577, 2123
Bse3DI GCAATG 3 cut(s) 1811, 1919, 2005
Bse8I GATNNNNATC 2 cut(s) 435, 1285
BseAI TCCGGA 1 cut(s) 1080
BseDI CCNNGG 2 cut(s) 1125, 1393
BseGI GGATG 2 cut(s) 1214, 1521
BseJI GATNNNNATC 2 cut(s) 435, 1285
BseLI CCNNNNNNNGG 8 cut(s) 92, 488, 577, 650, 662, 663, 1131, 1468
BseMI GCAATG 3 cut(s) 1811, 1919, 2005
BseMII CTCAG 3 cut(s) 27, 1070, 1413
BseNI ACTGG 5 cut(s) 518, 579, 1265, 1577, 2123
BseRI GAGGAG 4 cut(s) 1922, 2081, 2084, 2152
BseXI GCAGC 7 cut(s) 706, 970, 1105, 1133, 1335, 1929, 1932
BseYI CCCAGC 1 cut(s) 812
BsgI GTGCAG 1 cut(s) 1931
Bsh1236I CGCG 1 cut(s) 1768
BshFI GGCC 7 cut(s) 481, 589, 654, 754, 847, 1757, 2153
BshTI ACCGGT 1 cut(s) 1930
BsiHKAI GWGCWC 3 cut(s) 612, 827, 1347
BsiSI CCGG 6 cut(s) 93, 1081, 1169, 1469, 1779, 1931
BslI CCNNNNNNNGG 8 cut(s) 92, 488, 577, 650, 662, 663, 1131, 1468
BsmAI GTCTC 8 cut(s) 200, 325, 764, 1059, 1078, 1160, 1675, 2029
BsmBI CGTCTC 3 cut(s) 764, 1078, 2029
BsnI GGCC 7 cut(s) 481, 589, 654, 754, 847, 1757, 2153
Bso31I GGTCTC 1 cut(s) 1059
Bsp119I TTCGAA 1 cut(s) 2048
Bsp1286I GDGCHC 4 cut(s) 612, 827, 1064, 1347
Bsp13I TCCGGA 1 cut(s) 1080
Bsp1407I TGTACA 1 cut(s) 1317
Bsp143I GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
BspACI CCGC 7 cut(s) 1740, 1768, 1871, 1940, 2017, 2028, 2125
BspANI GGCC 7 cut(s) 481, 589, 654, 754, 847, 1757, 2153
BspCNI CTCAG 3 cut(s) 28, 1069, 1412
BspEI TCCGGA 1 cut(s) 1080
BspFNI CGCG 1 cut(s) 1768
BspLI GGNNCC 1 cut(s) 655
BspMAI CTGCAG 1 cut(s) 1123
BspMI ACCTGC 1 cut(s) 1552
BspPI GGATC 1 cut(s) 2104
BspQI GCTCTTC 1 cut(s) 948
BspT104I TTCGAA 1 cut(s) 2048
BspTNI GGTCTC 1 cut(s) 1059
BsrBI CCGCTC 1 cut(s) 1871
BsrDI GCAATG 3 cut(s) 1811, 1919, 2005
BsrFI RCCGGY 2 cut(s) 92, 1930
BsrGI TGTACA 1 cut(s) 1317
BsrI ACTGG 5 cut(s) 518, 579, 1265, 1577, 2123
BssAI RCCGGY 2 cut(s) 92, 1930
BssECI CCNNGG 2 cut(s) 1125, 1393
BssMI GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
BssSI CACGAG 1 cut(s) 680
BssT1I CCWWGG 2 cut(s) 1125, 1393
Bst2BI CACGAG 1 cut(s) 680
Bst4CI ACNGT 5 cut(s) 23, 346, 1273, 1342, 2087
Bst6I CTCTTC 3 cut(s) 168, 175, 948
BstAUI TGTACA 1 cut(s) 1317
BstBI TTCGAA 1 cut(s) 2048
BstC8I GCNNGC 8 cut(s) 94, 474, 483, 652, 756, 1328, 1852, 1920
BstDEI CTNAG 7 cut(s) 36, 337, 384, 467, 1056, 1293, 1399
BstF5I GGATG 2 cut(s) 1214, 1521
BstFNI CGCG 1 cut(s) 1768
BstHHI GCGC 2 cut(s) 570, 1768
BstKTI GATC 7 cut(s) 232, 503, 677, 909, 1091, 1719, 2099
BstMAI GTCTC 8 cut(s) 200, 325, 764, 1059, 1078, 1160, 1675, 2029
BstMBI GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
BstMWI GCNNNNNNNGC 9 cut(s) 469, 478, 482, 751, 809, 1763, 1909, 1945, 2016
BstNSI RCATGY 3 cut(s) 123, 1155, 1922
BstSCI CCNGG 1 cut(s) 1467
BstSFI CTRYAG 2 cut(s) 619, 1119
BstUI CGCG 1 cut(s) 1768
BstV1I GCAGC 7 cut(s) 706, 970, 1105, 1133, 1335, 1929, 1932
BstV2I GAAGAC 4 cut(s) 277, 500, 1524, 1593
BstX2I RGATCY 2 cut(s) 500, 906
BstYI RGATCY 2 cut(s) 500, 906
BsuI GTATCC 1 cut(s) 1540
BsuRI GGCC 7 cut(s) 481, 589, 654, 754, 847, 1757, 2153
BtsCI GGATG 2 cut(s) 1214, 1521
BtsI GCAGTG 1 cut(s) 1632
BtsIMutI CAGTG 3 cut(s) 572, 1379, 1632
BveI ACCTGC 1 cut(s) 1552
Cac8I GCNNGC 8 cut(s) 94, 474, 483, 652, 756, 1328, 1852, 1920
CaiI CAGNNNCTG 1 cut(s) 1381
CfoI GCGC 2 cut(s) 570, 1768
Cfr10I RCCGGY 2 cut(s) 92, 1930
Cfr13I GGNCC 3 cut(s) 653, 752, 846
CseI GACGC 1 cut(s) 271
Csp6I GTAC 4 cut(s) 212, 539, 1318, 1804
CspAI ACCGGT 1 cut(s) 1930
CviQI GTAC 4 cut(s) 212, 539, 1318, 1804
DdeI CTNAG 7 cut(s) 36, 337, 384, 467, 1056, 1293, 1399
DpnI GATC 7 cut(s) 231, 502, 676, 908, 1090, 1718, 2098
DpnII GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
EaeI YGGCCR 1 cut(s) 1755
Eam1104I CTCTTC 3 cut(s) 168, 175, 948
EarI CTCTTC 3 cut(s) 168, 175, 948
EciI GGCGGA 1 cut(s) 2017
Ecl136II GAGCTC 1 cut(s) 610
Eco130I CCWWGG 2 cut(s) 1125, 1393
Eco24I GRGCYC 2 cut(s) 612, 1064
Eco31I GGTCTC 1 cut(s) 1059
Eco32I GATATC 1 cut(s) 1287
Eco53kI GAGCTC 1 cut(s) 610
Eco57I CTGAAG 1 cut(s) 1860
EcoICRI GAGCTC 1 cut(s) 610
EcoRI GAATTC 1 cut(s) 614
EcoRV GATATC 1 cut(s) 1287
EcoT14I CCWWGG 2 cut(s) 1125, 1393
EcoT38I GRGCYC 2 cut(s) 612, 1064
ErhI CCWWGG 2 cut(s) 1125, 1393
Esp3I CGTCTC 3 cut(s) 764, 1078, 2029
FauNDI CATATG 1 cut(s) 980
FbaI TGATCA 1 cut(s) 1716
FblI GTMKAC 1 cut(s) 2054
FokI GGATG 2 cut(s) 1201, 1528
FriOI GRGCYC 2 cut(s) 612, 1064
FspBI CTAG 1 cut(s) 882
GlaI GCGC 2 cut(s) 569, 1767
GsaI CCCAGC 1 cut(s) 816
GsuI CTGGAG 1 cut(s) 2168
HaeIII GGCC 7 cut(s) 481, 589, 654, 754, 847, 1757, 2153
HapII CCGG 6 cut(s) 93, 1081, 1169, 1469, 1779, 1931
HgaI GACGC 1 cut(s) 271
HhaI GCGC 2 cut(s) 570, 1768
Hin6I GCGC 2 cut(s) 568, 1766
HinP1I GCGC 2 cut(s) 568, 1766
HincII GTYRAC 2 cut(s) 1776, 2055
HindII GTYRAC 2 cut(s) 1776, 2055
HindIII AAGCTT 1 cut(s) 386
HinfI GANTC 6 cut(s) 183, 436, 514, 1193, 1384, 1888
HpaII CCGG 6 cut(s) 93, 1081, 1169, 1469, 1779, 1931
HphI GGTGA 4 cut(s) 592, 1499, 1815, 1945
Hpy166II GTNNAC 3 cut(s) 1318, 1776, 2055
Hpy188III TCNNGA 8 cut(s) 324, 688, 1081, 1508, 1664, 1720, 1969, 2147
Hpy8I GTNNAC 3 cut(s) 1318, 1776, 2055
Hpy99I CGWCG 1 cut(s) 2059
HpyAV CCTTC 4 cut(s) 579, 1044, 1468, 1836
HpyCH4III ACNGT 5 cut(s) 23, 346, 1273, 1342, 2087
HpyCH4IV ACGT 1 cut(s) 1356
HpyF10VI GCNNNNNNNGC 9 cut(s) 469, 478, 482, 751, 809, 1763, 1909, 1945, 2016
HpyF3I CTNAG 7 cut(s) 36, 337, 384, 467, 1056, 1293, 1399
HpySE526I ACGT 1 cut(s) 1356
HspAI GCGC 2 cut(s) 568, 1766
Kpn2I TCCGGA 1 cut(s) 1080
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Ksp22I TGATCA 1 cut(s) 1716
Kzo9I GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
LguI GCTCTTC 1 cut(s) 948
LmnI GCTCC 4 cut(s) 607, 830, 1909, 1980
Lsp1109I GCAGC 7 cut(s) 706, 970, 1105, 1133, 1335, 1929, 1932
LweI GCATC 3 cut(s) 79, 115, 174
MaeI CTAG 1 cut(s) 882
MaeII ACGT 1 cut(s) 1356
MaeIII GTNAC 9 cut(s) 3, 23, 295, 340, 379, 911, 1301, 1352, 2075
MalI GATC 7 cut(s) 231, 502, 676, 908, 1090, 1718, 2098
MbiI CCGCTC 1 cut(s) 1871
MboI GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
MfeI CAATTG 3 cut(s) 360, 1237, 2100
MflI RGATCY 2 cut(s) 500, 906
MhlI GDGCHC 4 cut(s) 612, 827, 1064, 1347
MlyI GAGTC 2 cut(s) 192, 1202
MmeI TCCRAC 2 cut(s) 1524, 2112
MroI TCCGGA 1 cut(s) 1080
MroNI GCCGGC 1 cut(s) 92
MroXI GAANNNNTTC 2 cut(s) 700, 1248
MseI TTAA 4 cut(s) 131, 510, 972, 1203
MslI CAYNNNNRTG 4 cut(s) 118, 884, 1187, 1434
MspA1I CMGCKG 1 cut(s) 1942
MspI CCGG 6 cut(s) 93, 1081, 1169, 1469, 1779, 1931
MspR9I CCNGG 1 cut(s) 1469
MunI CAATTG 3 cut(s) 360, 1237, 2100
MvnI CGCG 1 cut(s) 1768
MwoI GCNNNNNNNGC 9 cut(s) 469, 478, 482, 751, 809, 1763, 1909, 1945, 2016
NaeI GCCGGC 1 cut(s) 94
NciI CCSGG 1 cut(s) 1469
NdeI CATATG 1 cut(s) 980
NdeII GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
NgoMIV GCCGGC 1 cut(s) 92
NlaIV GGNNCC 1 cut(s) 655
NmeAIII GCCGAG 1 cut(s) 2056
NmuCI GTSAC 5 cut(s) 3, 23, 379, 1301, 2075
NspI RCATGY 3 cut(s) 123, 1155, 1922
NspV TTCGAA 1 cut(s) 2048
PaeI GCATGC 1 cut(s) 1922
PciI ACATGT 1 cut(s) 1151
PciSI GCTCTTC 1 cut(s) 948
PcsI WCGNNNNNNNCGW 1 cut(s) 2054
PdiI GCCGGC 1 cut(s) 94
PdmI GAANNNNTTC 2 cut(s) 700, 1248
PfeI GAWTC 4 cut(s) 436, 514, 1384, 1888
PinAI ACCGGT 1 cut(s) 1930
PleI GAGTC 2 cut(s) 191, 1201
PpsI GAGTC 2 cut(s) 191, 1201
PscI ACATGT 1 cut(s) 1151
PsiI TTATAA 1 cut(s) 309
Psp124BI GAGCTC 1 cut(s) 612
PspFI CCCAGC 1 cut(s) 812
PspN4I GGNNCC 1 cut(s) 655
PspPI GGNCC 3 cut(s) 653, 752, 846
PsrI GAACNNNNNNTAC 2 cut(s) 1129, 1161
PstI CTGCAG 1 cut(s) 1123
PstNI CAGNNNCTG 1 cut(s) 1381
PsuI RGATCY 2 cut(s) 500, 906
RsaI GTAC 4 cut(s) 213, 540, 1319, 1805
RsaNI GTAC 4 cut(s) 212, 539, 1318, 1804
RseI CAYNNNNRTG 4 cut(s) 118, 884, 1187, 1434
SacI GAGCTC 1 cut(s) 612
SalI GTCGAC 1 cut(s) 2053
SapI GCTCTTC 1 cut(s) 948
SaqAI TTAA 4 cut(s) 131, 510, 972, 1203
Sau3AI GATC 7 cut(s) 229, 500, 674, 906, 1088, 1716, 2096
Sau96I GGNCC 3 cut(s) 653, 752, 846
ScaI AGTACT 1 cut(s) 1805
SchI GAGTC 2 cut(s) 192, 1202
ScrFI CCNGG 1 cut(s) 1469
SduI GDGCHC 4 cut(s) 612, 827, 1064, 1347
SfaNI GCATC 3 cut(s) 79, 115, 174
SfcI CTRYAG 2 cut(s) 619, 1119
SfuI TTCGAA 1 cut(s) 2048
SgrAI CRCCGGYG 1 cut(s) 1930
SmiMI CAYNNNNRTG 4 cut(s) 118, 884, 1187, 1434
SmlI CTYRAG 3 cut(s) 389, 740, 1508
SmoI CTYRAG 3 cut(s) 389, 740, 1508
SphI GCATGC 1 cut(s) 1922
SsiI CCGC 7 cut(s) 1740, 1768, 1871, 1940, 2017, 2028, 2125
SspMI CTAG 1 cut(s) 882
SstI GAGCTC 1 cut(s) 612
StyD4I CCNGG 1 cut(s) 1467
StyI CCWWGG 2 cut(s) 1125, 1393
TaaI ACNGT 5 cut(s) 23, 346, 1273, 1342, 2087
TaiI ACGT 1 cut(s) 1359
TaqI TCGA 5 cut(s) 612, 725, 1692, 2048, 2054
TaqII GACCGA 2 cut(s) 42, 890
TatI WGTACW 2 cut(s) 1317, 1803
TauI GCSGC 4 cut(s) 1742, 1874, 1942, 2019
TfiI GAWTC 4 cut(s) 436, 514, 1384, 1888
Tru1I TTAA 4 cut(s) 131, 510, 972, 1203
Tru9I TTAA 4 cut(s) 131, 510, 972, 1203
TscAI CASTG 3 cut(s) 579, 1386, 1639
TseFI GTSAC 5 cut(s) 3, 23, 379, 1301, 2075
TseI GCWGC 7 cut(s) 719, 958, 1118, 1121, 1323, 1942, 1945
Tsp45I GTSAC 5 cut(s) 3, 23, 379, 1301, 2075
TspDTI ATGAA 7 cut(s) 693, 1017, 1177, 1452, 1556, 1607, 1629
TspGWI ACGGA 2 cut(s) 817, 1207
TspRI CASTG 3 cut(s) 579, 1386, 1639
XapI RAATTY 5 cut(s) 248, 614, 896, 1440, 2059
XceI RCATGY 3 cut(s) 123, 1155, 1922
XmiI GTMKAC 1 cut(s) 2054
XmnI GAANNNNTTC 2 cut(s) 700, 1248
XspI CTAG 1 cut(s) 882
ZrmI AGTACT 1 cut(s) 1805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.