Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002833

Physical Location & Seq

Genomic Coordinates Reverse (-)

59574065 .. 59575887

Gene Structure 1823 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0438400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1116 bp

ATGAAGTTTTCCTTTCACCTCTTCTCCATCGCCATTTGCCTCACACTTTCACACACCTCCGCTCGCTTCTTCCCCAACATAACCAACATACCACCGTGGCTCCTCCCGAACGTCACCGTCCCAGCCGCTTCTAGCGCCTGGGACGCCTTCCAGAAGTTTGGGAACTGCCGCCCCGGCGAGAAGGTCGACGGCTTGGCCAAGCTCAAGAAGTATTTCAACTACTTCGGCTACATTCCCAACCTCCCTACCAACTTCACAGACGACTTCGACGATGAGCTCGAGTCGGCTCTCAAGACCTACCAGAAGAACTTCAACCTCAACGTCACAGGCGAACTAGACGAACAGACTATCAGCCACCTCGTGCGTCCCCGCTGCGGCAACCCTGACATAGTCAACGGCACGACCACCATGAACTCCGGCAAGCCGATGTCATTTAACGGCTCCAAGCTCCACACGGTGGGTCACTACTCTTTCTTTCCCGGAACTCCGGTCTGGCCGGAGGGCCGCCGCGATCTGACCTTCGCGTTCTTGTCGGACAACGAGCTTTCAGACGAGGCCAAGGCCGTGTTCGTTAGCGCCTTCCAGAAGTGGTCGACTGTCATTCCGATGACCTTCACCGAGACGACGTCGTTCTACTCGGCAGACATCAAGATCGGCTTCTACGTTGGAGACCACGGCGACGGTGAGGCCTTCGATGGCGTTCTGGGGACTCTGGCGCACGCGTTCTCTCCCCCGAGCGGGATGTTCCACCTGGACGGCGACGAGAACTGGGTCATCGGAGGTGACATCACCACGTCCACGGTGACGTCAGCCATCGACCTGGAGTCGGTGGCTGTTCACGAGATAGGTCACTTGTTAGGGTTGGGGCACTCTTCGGTTGAGGAGTCGATCATGTACCCAACCATCACGTCGAAGACGAAGAAAGTTGACCTCGCAAACGACGACGTTCAGGGGATTCAGAAACTGTATGGCGCCAACCCTAGTTACGACGGTTCGACTACGTCATCTACGCCGTCCACTGGGGCCAAGGAAACGTCGGCAGCTGGGGACCACACGGCTTCTCGGTGGGCCGCCGTAGTGGTTGTGGCCGTTGGATCAATGTTGCTCTCGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000313 GO:0000314 GO:0003002 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0005761 GO:0005763 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009657 GO:0009955 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0015935 GO:0016020 GO:0016043 GO:0016070 GO:0016072 GO:0019538 GO:0022613 GO:0031974 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032544 GO:0032991 GO:0034357 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042254 GO:0042651 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0048856 GO:0050896 GO:0055035 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098798 GO:1901259 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S5 Ribosomal_S5_C

Protein Analysis

371

Amino Acids

40.29

Weight (kDa)

5.14

Isoelectric Point (pI)

24.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PG_binding_1	PF01471	65 - 120	1.3e-12	Putative peptidoglycan binding domain
Peptidase_M10	PF00413	169 - 324	2.5e-49	Matrixin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33800
fragaria_vesca	FvH4_2g34180 FvH4_3g08970 FvH4_3g08970 FvH4_3g08970 FvH4_3g08970 FvH4_3g08970
malus_domestica	MD00G1115700.v1.1 MD10G1292500.v1.1
prunus_persica	Prupe.4G049400_v2.0.a1
pyrus_communis	pycom05g28910 pycom10g24460
rosa_chinensis	RchiOBHm_Chr5g0008741
rosa_laevigata	RLG00000031598 RLG00000031599
rosa_multiflora	Rmu_sc0001665.1_g000044 Rmu_sc0001665.1_g000045 Rmu_sc0001665.1_g000046 Rmu_sc0001665.1_g000047 Rmu_sc0007562.1_g000001 Rmu_sc0007563.1_g000001
rosa_roxburghii	Rroxscaffold_1G00067240 Rroxscaffold_1G00067260 Rroxscaffold_1G00067840 Rroxscaffold_1G00067850
rosa_rugosa	Rorug04G0438300 Rorug04G0438400 Rorug04G0438500 Rorug04G0438600 Rorug04G0438700 Rorug04G0438800
rosa_samantha	Rh5AG067000 Rh5AG067100 Rh5BG064100 Rh5CG074500 Rh5CG074600 Rh5DG061900 Rh5DG062200
rosa_wichuraiana	Rw5G006190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	629, 809
AccB1I	GGYRCC	1 cut(s)	971
AccB7I	CCANNNNNTGG	1 cut(s)	457
AccBSI	CCGCTC	2 cut(s)	62, 738
AccI	GTMKAC	2 cut(s)	186, 593
AccII	CGCG	3 cut(s)	510, 524, 722
AciI	CCGC	9 cut(s)	60, 126, 169, 370, 375, 505, 508, 738, 1071
AclWI	GGATC	1 cut(s)	1102
AcoI	YGGCCR	3 cut(s)	195, 494, 1086
AcyI	GRCGYC	4 cut(s)	144, 626, 806, 972
AdeI	CACNNNGTG	2 cut(s)	361, 457
AfaI	GTAC	1 cut(s)	896
AfiI	CCNNNNNNNGG	6 cut(s)	374, 457, 737, 738, 826, 1019
AflIII	ACRYGT	1 cut(s)	720
AgsI	TTSAA	2 cut(s)	217, 313
AhdI	GACNNNNNGTC	1 cut(s)	823
AjiI	CACGTC	2 cut(s)	795, 909
AjnI	CCWGG	3 cut(s)	137, 750, 819
AjuI	GAANNNNNNNTTGG	2 cut(s)	551, 583
AluBI	AGCT	5 cut(s)	202, 277, 448, 544, 1043
AluI	AGCT	5 cut(s)	202, 277, 448, 544, 1043
Alw21I	GWGCWC	1 cut(s)	279
Alw26I	GTCTC	2 cut(s)	614, 663
AlwI	GGATC	1 cut(s)	1102
AlwNI	CAGNNNCTG	1 cut(s)	964
Ama87I	CYCGRG	2 cut(s)	278, 733
AoxI	GGCC	9 cut(s)	195, 494, 502, 555, 561, 687, 1023, 1068, 1086
ApeKI	GCWGC	2 cut(s)	372, 1040
Asp700I	GAANNNNTTC	2 cut(s)	212, 308
AspLEI	GCGC	4 cut(s)	137, 578, 718, 974
AspS9I	GGNCC	4 cut(s)	502, 1023, 1048, 1068
AsuC2I	CCSGG	2 cut(s)	174, 480
AsuHPI	GGTGA	7 cut(s)	8, 106, 607, 695, 781, 794, 814
AvaI	CYCGRG	2 cut(s)	278, 733
AvaII	GGWCC	1 cut(s)	1048
BaeGI	GKGCMC	1 cut(s)	870
BalI	TGGCCA	1 cut(s)	197
BanI	GGYRCC	1 cut(s)	971
BanII	GRGCYC	1 cut(s)	279
BauI	CACGAG	2 cut(s)	359, 839
BbsI	GAAGAC	1 cut(s)	920
Bbv12I	GWGCWC	1 cut(s)	279
BbvI	GCAGC	2 cut(s)	359, 1052
BccI	CCATC	4 cut(s)	35, 689, 821, 911
BciT130I	CCWGG	3 cut(s)	139, 752, 821
BcnI	CCSGG	2 cut(s)	174, 480
BcoDI	GTCTC	2 cut(s)	614, 663
BfaI	CTAG	3 cut(s)	132, 335, 981
BfoI	RGCGCY	3 cut(s)	138, 579, 975
BglI	GCCNNNNNGGC	1 cut(s)	174
BisI	GCNGC	8 cut(s)	126, 169, 373, 376, 505, 508, 1041, 1071
BlsI	GCNGC	8 cut(s)	127, 170, 374, 377, 506, 509, 1042, 1072
Bme1390I	CCNGG	5 cut(s)	139, 174, 480, 752, 821
Bme18I	GGWCC	1 cut(s)	1048
BmeRI	GACNNNNNGTC	1 cut(s)	823
BmeT110I	CYCGRG	2 cut(s)	278, 733
BmgBI	CACGTC	2 cut(s)	795, 909
BmgT120I	GGNCC	4 cut(s)	502, 1023, 1048, 1068
BmiI	GGNNCC	5 cut(s)	101, 442, 973, 1024, 1049
BmrFI	CCNGG	5 cut(s)	139, 174, 480, 752, 821
BmrI	ACTGGG	2 cut(s)	778, 1029
BmuI	ACTGGG	2 cut(s)	778, 1029
BpiI	GAAGAC	1 cut(s)	920
BpmI	CTGGAG	1 cut(s)	842
BpuEI	CTTGAG	2 cut(s)	188, 275
BpuMI	CCSGG	2 cut(s)	174, 480
BsaHI	GRCGYC	4 cut(s)	144, 626, 806, 972
BsaI	GGTCTC	1 cut(s)	663
BsaJI	CCNNGG	7 cut(s)	95, 138, 172, 558, 673, 798, 1026
BsaWI	WCCGGW	1 cut(s)	487
BsaXI	ACNNNNNCTCC	4 cut(s)	8, 38, 84, 114
Bsc4I	CCNNNNNNNGG	6 cut(s)	374, 457, 737, 738, 826, 1019
Bse1I	ACTGG	2 cut(s)	773, 1024
BseBI	CCWGG	3 cut(s)	139, 752, 821
BseDI	CCNNGG	7 cut(s)	95, 138, 172, 558, 673, 798, 1026
BseGI	GGATG	1 cut(s)	747
BseLI	CCNNNNNNNGG	6 cut(s)	374, 457, 737, 738, 826, 1019
BseNI	ACTGG	2 cut(s)	773, 1024
BseRI	GAGGAG	2 cut(s)	92, 896
BseSI	GKGCMC	1 cut(s)	870
BseXI	GCAGC	2 cut(s)	359, 1052
BseYI	CCCAGC	2 cut(s)	121, 1043
Bsh1236I	CGCG	3 cut(s)	510, 524, 722
BshFI	GGCC	9 cut(s)	197, 496, 504, 557, 563, 689, 1025, 1070, 1088
BshNI	GGYRCC	1 cut(s)	971
BsiHKAI	GWGCWC	1 cut(s)	279
BsiHKCI	CYCGRG	2 cut(s)	278, 733
BsiSI	CCGG	5 cut(s)	174, 417, 480, 488, 497
BslFI	GGGAC	5 cut(s)	104, 155, 351, 721, 1061
BslI	CCNNNNNNNGG	6 cut(s)	374, 457, 737, 738, 826, 1019
BsmAI	GTCTC	2 cut(s)	614, 663
BsmBI	CGTCTC	1 cut(s)	614
BsmFI	GGGAC	5 cut(s)	104, 155, 351, 721, 1061
BsnI	GGCC	9 cut(s)	197, 496, 504, 557, 563, 689, 1025, 1070, 1088
Bso31I	GGTCTC	1 cut(s)	663
BsoBI	CYCGRG	2 cut(s)	278, 733
Bsp1286I	GDGCHC	2 cut(s)	279, 870
Bsp143I	GATC	4 cut(s)	511, 651, 888, 1094
BspACI	CCGC	9 cut(s)	60, 126, 169, 370, 375, 505, 508, 738, 1071
BspANI	GGCC	9 cut(s)	197, 496, 504, 557, 563, 689, 1025, 1070, 1088
BspFNI	CGCG	3 cut(s)	510, 524, 722
BspLI	GGNNCC	5 cut(s)	101, 442, 973, 1024, 1049
BspPI	GGATC	1 cut(s)	1102
BspT107I	GGYRCC	1 cut(s)	971
BspTNI	GGTCTC	1 cut(s)	663
BsrBI	CCGCTC	2 cut(s)	62, 738
BsrI	ACTGG	2 cut(s)	773, 1024
BssECI	CCNNGG	7 cut(s)	95, 138, 172, 558, 673, 798, 1026
BssMI	GATC	4 cut(s)	511, 651, 888, 1094
BssNI	GRCGYC	4 cut(s)	144, 626, 806, 972
BssSI	CACGAG	2 cut(s)	359, 839
BssT1I	CCWWGG	2 cut(s)	558, 1026
Bst2BI	CACGAG	2 cut(s)	359, 839
Bst2UI	CCWGG	3 cut(s)	139, 752, 821
Bst4CI	ACNGT	8 cut(s)	96, 118, 457, 598, 683, 802, 966, 992
Bst6I	CTCTTC	2 cut(s)	26, 877
BstACI	GRCGYC	4 cut(s)	144, 626, 806, 972
BstC8I	GCNNGC	3 cut(s)	64, 422, 720
BstDSI	CCRYGG	3 cut(s)	95, 673, 798
BstF5I	GGATG	1 cut(s)	747
BstFNI	CGCG	3 cut(s)	510, 524, 722
BstH2I	RGCGCY	3 cut(s)	138, 579, 975
BstHHI	GCGC	4 cut(s)	137, 578, 718, 974
BstKTI	GATC	4 cut(s)	514, 654, 891, 1097
BstMAI	GTCTC	2 cut(s)	614, 663
BstMBI	GATC	4 cut(s)	511, 651, 888, 1094
BstMWI	GCNNNNNNNGC	3 cut(s)	134, 143, 174
BstNI	CCWGG	3 cut(s)	139, 752, 821
BstSCI	CCNGG	5 cut(s)	137, 172, 478, 750, 819
BstSLI	GKGCMC	1 cut(s)	870
BstUI	CGCG	3 cut(s)	510, 524, 722
BstV1I	GCAGC	2 cut(s)	359, 1052
BstV2I	GAAGAC	1 cut(s)	920
BstXI	CCANNNNNNTGG	2 cut(s)	158, 820
BsuRI	GGCC	9 cut(s)	197, 496, 504, 557, 563, 689, 1025, 1070, 1088
BtgI	CCRYGG	3 cut(s)	95, 673, 798
BtgZI	GCGATG	1 cut(s)	13
BtrI	CACGTC	2 cut(s)	795, 909
BtsCI	GGATG	1 cut(s)	747
BtsIMutI	CAGTG	1 cut(s)	1017
Cac8I	GCNNGC	3 cut(s)	64, 422, 720
CaiI	CAGNNNCTG	1 cut(s)	964
CfoI	GCGC	4 cut(s)	137, 578, 718, 974
Cfr13I	GGNCC	4 cut(s)	502, 1023, 1048, 1068
CseI	GACGC	2 cut(s)	152, 353
Csp6I	GTAC	1 cut(s)	895
CviAII	CATG	2 cut(s)	409, 892
CviQI	GTAC	1 cut(s)	895
DinI	GGCGCC	1 cut(s)	973
DpnI	GATC	4 cut(s)	513, 653, 890, 1096
DpnII	GATC	4 cut(s)	511, 651, 888, 1094
DraIII	CACNNNGTG	2 cut(s)	361, 457
DriI	GACNNNNNGTC	1 cut(s)	823
EaeI	YGGCCR	3 cut(s)	195, 494, 1086
Eam1104I	CTCTTC	2 cut(s)	26, 877
Eam1105I	GACNNNNNGTC	1 cut(s)	823
EarI	CTCTTC	2 cut(s)	26, 877
Ecl136II	GAGCTC	1 cut(s)	277
Eco130I	CCWWGG	2 cut(s)	558, 1026
Eco147I	AGGCCT	1 cut(s)	689
Eco24I	GRGCYC	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	663
Eco47I	GGWCC	1 cut(s)	1048
Eco53kI	GAGCTC	1 cut(s)	277
Eco88I	CYCGRG	2 cut(s)	278, 733
EcoICRI	GAGCTC	1 cut(s)	277
EcoRII	CCWGG	3 cut(s)	137, 750, 819
EcoT14I	CCWWGG	2 cut(s)	558, 1026
EcoT38I	GRGCYC	1 cut(s)	279
EgeI	GGCGCC	1 cut(s)	973
EheI	GGCGCC	1 cut(s)	973
ErhI	CCWWGG	2 cut(s)	558, 1026
Esp3I	CGTCTC	1 cut(s)	614
FaeI	CATG	2 cut(s)	412, 895
FaiI	YATR	6 cut(s)	80, 89, 389, 410, 893, 969
FalI	AAGNNNNNCTT	3 cut(s)	28, 641, 673
FaqI	GGGAC	5 cut(s)	104, 155, 351, 721, 1061
FatI	CATG	2 cut(s)	408, 891
FauI	CCCGC	2 cut(s)	377, 731
FblI	GTMKAC	2 cut(s)	186, 593
Fnu4HI	GCNGC	8 cut(s)	126, 169, 373, 376, 505, 508, 1041, 1071
FokI	GGATG	1 cut(s)	754
FriOI	GRGCYC	1 cut(s)	279
Fsp4HI	GCNGC	8 cut(s)	126, 169, 373, 376, 505, 508, 1041, 1071
FspBI	CTAG	3 cut(s)	132, 335, 981
GlaI	GCGC	4 cut(s)	136, 577, 717, 973
GluI	GCNGC	8 cut(s)	126, 169, 373, 376, 505, 508, 1041, 1071
GsaI	CCCAGC	2 cut(s)	125, 1047
GsuI	CTGGAG	1 cut(s)	842
HaeII	RGCGCY	3 cut(s)	138, 579, 975
HaeIII	GGCC	9 cut(s)	197, 496, 504, 557, 563, 689, 1025, 1070, 1088
HapII	CCGG	5 cut(s)	174, 417, 480, 488, 497
HgaI	GACGC	2 cut(s)	152, 353
HhaI	GCGC	4 cut(s)	137, 578, 718, 974
Hin1I	GRCGYC	4 cut(s)	144, 626, 806, 972
Hin1II	CATG	2 cut(s)	412, 895
Hin6I	GCGC	4 cut(s)	135, 576, 716, 972
HinP1I	GCGC	4 cut(s)	135, 576, 716, 972
HincII	GTYRAC	4 cut(s)	187, 394, 594, 928
HindII	GTYRAC	4 cut(s)	187, 394, 594, 928
HinfI	GANTC	5 cut(s)	281, 709, 824, 884, 955
HpaII	CCGG	5 cut(s)	174, 417, 480, 488, 497
HphI	GGTGA	7 cut(s)	8, 106, 607, 695, 781, 794, 814
Hpy166II	GTNNAC	7 cut(s)	187, 394, 594, 798, 838, 928, 1017
Hpy188I	TCNGA	6 cut(s)	516, 535, 550, 606, 779, 960
Hpy188III	TCNNGA	7 cut(s)	106, 151, 205, 292, 583, 649, 839
Hpy8I	GTNNAC	7 cut(s)	187, 394, 594, 798, 838, 928, 1017
HpyAV	CCTTC	6 cut(s)	157, 175, 529, 589, 622, 700
HpyCH4III	ACNGT	8 cut(s)	96, 118, 457, 598, 683, 802, 966, 992
HpyF10VI	GCNNNNNNNGC	3 cut(s)	134, 143, 174
Hsp92I	GRCGYC	4 cut(s)	144, 626, 806, 972
Hsp92II	CATG	2 cut(s)	412, 895
HspAI	GCGC	4 cut(s)	135, 576, 716, 972
KasI	GGCGCC	1 cut(s)	971
Kzo9I	GATC	4 cut(s)	511, 651, 888, 1094
LmnI	GCTCC	3 cut(s)	105, 446, 453
Lsp1109I	GCAGC	2 cut(s)	359, 1052
MaeI	CTAG	3 cut(s)	132, 335, 981
MaeIII	GTNAC	7 cut(s)	112, 322, 461, 782, 802, 848, 983
MalI	GATC	4 cut(s)	513, 653, 890, 1096
MbiI	CCGCTC	2 cut(s)	62, 738
MboI	GATC	4 cut(s)	511, 651, 888, 1094
MboII	GAAGA	6 cut(s)	13, 61, 316, 864, 925, 931
MhlI	GDGCHC	2 cut(s)	279, 870
MlsI	TGGCCA	1 cut(s)	197
MluI	ACGCGT	1 cut(s)	720
MluNI	TGGCCA	1 cut(s)	197
Mly113I	GGCGCC	1 cut(s)	972
MlyI	GAGTC	4 cut(s)	290, 703, 833, 893
MmeI	TCCRAC	3 cut(s)	513, 646, 1072
Mox20I	TGGCCA	1 cut(s)	197
MroXI	GAANNNNTTC	2 cut(s)	212, 308
MscI	TGGCCA	1 cut(s)	197
MseI	TTAA	2 cut(s)	435, 1114
MslI	CAYNNNNRTG	1 cut(s)	605
Msp20I	TGGCCA	1 cut(s)	197
MspA1I	CMGCKG	2 cut(s)	372, 1043
MspI	CCGG	5 cut(s)	174, 417, 480, 488, 497
MspR9I	CCNGG	5 cut(s)	139, 174, 480, 752, 821
MvaI	CCWGG	3 cut(s)	139, 752, 821
MvnI	CGCG	3 cut(s)	510, 524, 722
MwoI	GCNNNNNNNGC	3 cut(s)	134, 143, 174
NarI	GGCGCC	1 cut(s)	972
NciI	CCSGG	2 cut(s)	174, 480
NdeII	GATC	4 cut(s)	511, 651, 888, 1094
NlaIII	CATG	2 cut(s)	412, 895
NlaIV	GGNNCC	5 cut(s)	101, 442, 973, 1024, 1049
NmeAIII	GCCGAG	1 cut(s)	617
NmuCI	GTSAC	6 cut(s)	112, 322, 461, 782, 802, 848
PaeR7I	CTCGAG	1 cut(s)	278
PceI	AGGCCT	1 cut(s)	689
PcsI	WCGNNNNNNNCGW	6 cut(s)	267, 276, 327, 660, 914, 939
PdmI	GAANNNNTTC	2 cut(s)	212, 308
PfeI	GAWTC	1 cut(s)	955
PflFI	GACNNNGTC	3 cut(s)	389, 625, 1000
PflMI	CCANNNNNTGG	1 cut(s)	457
PfoI	TCCNGGA	1 cut(s)	478
PkrI	GCNGC	8 cut(s)	127, 170, 374, 377, 506, 509, 1042, 1072
PleI	GAGTC	4 cut(s)	289, 703, 832, 892
PluTI	GGCGCC	1 cut(s)	975
PpsI	GAGTC	4 cut(s)	289, 703, 832, 892
Psp124BI	GAGCTC	1 cut(s)	279
Psp6I	CCWGG	3 cut(s)	137, 750, 819
PspFI	CCCAGC	2 cut(s)	121, 1043
PspGI	CCWGG	3 cut(s)	137, 750, 819
PspN4I	GGNNCC	5 cut(s)	101, 442, 973, 1024, 1049
PspPI	GGNCC	4 cut(s)	502, 1023, 1048, 1068
PspXI	VCTCGAGB	1 cut(s)	278
PstNI	CAGNNNCTG	1 cut(s)	964
PsyI	GACNNNGTC	3 cut(s)	389, 625, 1000
PvuII	CAGCTG	1 cut(s)	1043
RsaI	GTAC	1 cut(s)	896
RsaNI	GTAC	1 cut(s)	895
RseI	CAYNNNNRTG	1 cut(s)	605
SacI	GAGCTC	1 cut(s)	279
SalI	GTCGAC	2 cut(s)	185, 592
SaqAI	TTAA	2 cut(s)	435, 1114
SatI	GCNGC	8 cut(s)	126, 169, 373, 376, 505, 508, 1041, 1071
Sau3AI	GATC	4 cut(s)	511, 651, 888, 1094
Sau96I	GGNCC	4 cut(s)	502, 1023, 1048, 1068
SchI	GAGTC	4 cut(s)	290, 703, 833, 893
ScrFI	CCNGG	5 cut(s)	139, 174, 480, 752, 821
SduI	GDGCHC	2 cut(s)	279, 870
SfoI	GGCGCC	1 cut(s)	973
Sfr274I	CTCGAG	1 cut(s)	278
SinI	GGWCC	1 cut(s)	1048
SlaI	CTCGAG	1 cut(s)	278
SmiMI	CAYNNNNRTG	1 cut(s)	605
SmlI	CTYRAG	3 cut(s)	203, 278, 290
SmoI	CTYRAG	3 cut(s)	203, 278, 290
SseBI	AGGCCT	1 cut(s)	689
SsiI	CCGC	9 cut(s)	60, 126, 169, 370, 375, 505, 508, 738, 1071
SspDI	GGCGCC	1 cut(s)	971
SspMI	CTAG	3 cut(s)	132, 335, 981
SstI	GAGCTC	1 cut(s)	279
StuI	AGGCCT	1 cut(s)	689
StyD4I	CCNGG	5 cut(s)	137, 172, 478, 750, 819
StyI	CCWWGG	2 cut(s)	558, 1026
TaaI	ACNGT	8 cut(s)	96, 118, 457, 598, 683, 802, 966, 992
TaqI	TCGA	9 cut(s)	186, 267, 279, 593, 693, 816, 887, 911, 995
TauI	GCSGC	6 cut(s)	128, 171, 378, 507, 510, 1073
TfiI	GAWTC	1 cut(s)	955
Tru1I	TTAA	2 cut(s)	435, 1114
Tru9I	TTAA	2 cut(s)	435, 1114
TscAI	CASTG	1 cut(s)	1024
TseFI	GTSAC	6 cut(s)	112, 322, 461, 782, 802, 848
TseI	GCWGC	2 cut(s)	372, 1040
Tsp45I	GTSAC	6 cut(s)	112, 322, 461, 782, 802, 848
TspDTI	ATGAA	2 cut(s)	17, 425
TspRI	CASTG	1 cut(s)	1024
Tth111I	GACNNNGTC	3 cut(s)	389, 625, 1000
Van91I	CCANNNNNTGG	1 cut(s)	457
VpaK11BI	GGWCC	1 cut(s)	1048
XhoI	CTCGAG	1 cut(s)	278
XmiI	GTMKAC	2 cut(s)	186, 593
XmnI	GAANNNNTTC	2 cut(s)	212, 308
XspI	CTAG	3 cut(s)	132, 335, 981
ZraI	GACGTC	2 cut(s)	627, 807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.