Rmu_sc0001880.1_g000035

CCAAT enhancer-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001880.1
OG0008077
Physical Location & Seq
Forward (+)
152899 .. 158592
5694 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2598 bp
atggcggacagaaagaaatctaagaaacccacaaacaacaacatcgagcacctcaagactgacatagcctccttcgcttcctccctcggcctctctacctctctccctccctctgattcttcaggcttcaacgatgtcgatttccacaaccccaaaaaaccccaacagaggcctaaaccctcaaaaccccagaattccaaaccccaaaatcgaaacacccagaacttcaaacccaatgaaaggcccaatctttcgaaacccccttttccttcagtccctgatgtcaccagcaacagtgaaaaagcaaagacctttgagaatcttccgaagctgccgttgatttcagccaccaacattggagtgtggtacgaagaagctgaagaatttgattcatatctcaggtatgaacgctttgttattgctcttgaggaagcatcaagagatatgttacctgaactaaaaaacaaggcattgaagactatatatgtattactaaagagtaaatcggagcaagagcgaagattactgtctgccctagttaataaactgggagatcctaaaaataagggtgcttcagatgctgattttcacttatcaaaccttttgcgtgaccatccaaacatgaaggctgtggtgattgatgaggtggactcttttctctttcggccgcatttaaacatacaagcaaagtaccatgcggttaactttttgagccaaattcaactaagaaataaaggagatggaccaaaggtggcaaaaagtttggtagatgtatattttgcacttttcaaggtactgatttctgaggcaggtggaggtgaaaagaccgaaaagaacgagaaagtagggggtaaaaaaccagccggttctcgtaaggatggcaaaggcaatagttcatcagattctcattttgaactggattcacgtcttctatcagctctattaatgggagtcaatagagcattcccatatgtttcaaagaatgaggctgatgatgttgttgaggcccaaacaccaacgcttttccatttggttcattctactaacttcaatgtaggagttcaagcactgatgcttcttcatcatatctcatctaagaatcaaattgtcagtgataggttttaccgagccttgtactcaaaactactccttccagctgccatgaatacttccaaggctgaaacatttattggacttcttctgagagcaatgaaatctgatgtcaatgtgaagcgtacagctgcttttgcaaaacgtctactgcaggtcgcccttcaacagccgcctcaatatgcatgtggatgcctctttcttctctctgaagttctaaaagcacggccccccttgtggaacatggtgctccaaaatgagtcagttgatgatgaccttgagcattttgaagatgtgatagaagaaaccgataacgaacccagccctgtcctggagaaacaagaagttgaacttgttcataagagtgatgaaaaaagtgataccgtcaattccgatcatgattcttcagaagatgatattgactcttccgcctcatattctgaagatgaagcttccgatgaagcagatgagtttcattttagaaatgattcaaaggactccaagacggtgcctgatagtagcgtgcagcaaccacaagtagtgtcctctgagaagacttcactacctggaggctatgatccacgacacagagagccctcttactgcaatgcagatcgtgtaagctggtgggagttgacagtacttgcttcacatgtgcacccttcagtttctaccatggcaaagacacttctctctggggcgaatattgtctataatggaaacccactgaatgacctatcacttactgcttttctggacaagtttatggagaaaaaaccaaaggcaagcacatggcatggtggttcgcaaattgaacctgtgaaaaagcttgacatgaccaaccgattcataggaccagaaatcctctcattggctgaagaagatgtacctgcagaagatctcgtctttcacaagttctacatgaataaaatgaatacttcgaagaaaccaaagaagaagaagaagaaggcaacaacagaagatgaagatgccgcgaagttgtttgatgtggatggtggtggtgatgatgagagtgataatgaagagattgacaatatgctggattctgctggtattgccatggatgcagatggcgactatgattatgatgatctagaccaagtagccaatgacgacgatgaagacttggttagtgatgtcagtgatgtcagtgatgctgatcttgacctgccctcagatattgcagagggtgaagattttgataccactgcagttagtgatgaaagtgatgatggcgatgatgctattgatataggagatgttgatgacgacgaggttgaggacgaggatgtccatattgagagtgtccaggggaaaagtaaacggaagcgtgggaaggctgcagcatccccatttgctagtctggaagaatatgagcatttgtttaacgaggacgcccctgctgagaaggaatctaaaagcaagaagaaatccaagccccgaaagaagagaaagtcgtctgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBF

Protein Analysis

865

Amino Acids

96.29

Weight (kDa)

4.96

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBF PF03914 354 - 597 8.1e-44 CBF/Mak21 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 800
AasI GACNNNNNNGTC 1 cut(s) 2420
Acc36I ACCTGC 4 cut(s) 800, 1255, 2008, 2307
AccB1I GGYRCC 1 cut(s) 1618
AccI GTMKAC 1 cut(s) 1258
AccII CGCG 1 cut(s) 2105
AciI CCGC 6 cut(s) 5, 668, 698, 1283, 1539, 2103
AclWI GGATC 2 cut(s) 548, 1682
AcoI YGGCCR 1 cut(s) 665
AcsI RAATTY 3 cut(s) 193, 383, 717
AcuI CTGAAG 9 cut(s) 105, 255, 399, 558, 1341, 1500, 1572, 1758, 2007
AcyI GRCGYC 1 cut(s) 2526
AfaI GTAC 7 cut(s) 368, 692, 795, 1136, 1237, 1752, 1998
AfiI CCNNNNNNNGG 5 cut(s) 168, 240, 1347, 1441, 1981
AflIII ACRYGT 1 cut(s) 1762
AjiI CACGTC 1 cut(s) 926
AjnI CCWGG 3 cut(s) 1440, 1675, 2439
AjuI GAANNNNNNNTTGG 2 cut(s) 1173, 1205
AluBI AGCT 8 cut(s) 331, 377, 938, 1157, 1241, 1562, 1734, 1939
AluI AGCT 8 cut(s) 331, 377, 938, 1157, 1241, 1562, 1734, 1939
Alw21I GWGCWC 3 cut(s) 51, 1362, 1770
Alw44I GTGCAC 1 cut(s) 1766
AlwI GGATC 2 cut(s) 548, 1682
AlwNI CAGNNNCTG 2 cut(s) 278, 581
AoxI GGCC 6 cut(s) 88, 170, 242, 665, 1005, 1337
ApaLI GTGCAC 1 cut(s) 1766
ApeKI GCWGC 6 cut(s) 331, 1157, 1241, 1636, 2471, 2474
ApoI RAATTY 3 cut(s) 193, 383, 717
AseI ATTAAT 1 cut(s) 944
Asp700I GAANNNNTTC 2 cut(s) 1464, 1597
AspS9I GGNCC 5 cut(s) 243, 743, 1006, 1338, 1964
AsuHPI GGTGA 5 cut(s) 277, 646, 830, 2144, 2333
AsuII TTCGAA 2 cut(s) 254, 2051
AvaII GGWCC 2 cut(s) 743, 1964
BaeGI GKGCMC 1 cut(s) 1770
BanI GGYRCC 1 cut(s) 1618
BanII GRGCYC 1 cut(s) 1707
BarI GAAGNNNNNNTAC 2 cut(s) 1980, 2012
BbsI GAAGAC 4 cut(s) 482, 920, 1670, 2259
Bbv12I GWGCWC 3 cut(s) 51, 1362, 1770
BbvI GCAGC 6 cut(s) 318, 1144, 1228, 1648, 2458, 2486
BccI CCATC 6 cut(s) 621, 734, 872, 2117, 2195, 2357
BceAI ACGGC 2 cut(s) 319, 1352
BciT130I CCWGG 3 cut(s) 1442, 1677, 2441
BfaI CTAG 3 cut(s) 536, 2225, 2490
BfmI CTRYAG 4 cut(s) 1262, 2001, 2340, 2472
BfuAI ACCTGC 4 cut(s) 800, 1255, 2008, 2307
BglII AGATCT 1 cut(s) 2008
BisI GCNGC 9 cut(s) 332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
BlsI GCNGC 9 cut(s) 333, 669, 1159, 1243, 1284, 1638, 2104, 2473, 2476
BmcAI AGTACT 1 cut(s) 1752
Bme1390I CCNGG 3 cut(s) 1442, 1677, 2441
Bme18I GGWCC 2 cut(s) 743, 1964
BmgBI CACGTC 1 cut(s) 926
BmgT120I GGNCC 5 cut(s) 243, 743, 1006, 1338, 1964
BmiI GGNNCC 2 cut(s) 1340, 1620
BmrFI CCNGG 3 cut(s) 1442, 1677, 2441
BmrI ACTGGG 1 cut(s) 557
BmsI GCATC 9 cut(s) 443, 568, 1062, 1292, 2089, 2185, 2275, 2362, 2486
BmuI ACTGGG 1 cut(s) 557
BpiI GAAGAC 4 cut(s) 482, 920, 1670, 2259
BplI GAGNNNNNCTC 2 cut(s) 635, 667
BpmI CTGGAG 2 cut(s) 1463, 1698
Bpu14I TTCGAA 2 cut(s) 254, 2051
BpuEI CTTGAG 3 cut(s) 38, 446, 1409
BsaBI GATNNNNATC 2 cut(s) 393, 2289
BsaHI GRCGYC 1 cut(s) 2526
BsaJI CCNNGG 5 cut(s) 85, 1173, 1785, 2190, 2440
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 240, 1347, 1441, 1981
Bse118I RCCGGY 1 cut(s) 863
Bse1I ACTGG 2 cut(s) 552, 921
Bse3DI GCAATG 2 cut(s) 1215, 1723
Bse8I GATNNNNATC 2 cut(s) 393, 2289
BseBI CCWGG 3 cut(s) 1442, 1677, 2441
BseDI CCNNGG 5 cut(s) 85, 1173, 1785, 2190, 2440
BseGI GGATG 7 cut(s) 613, 883, 1307, 2128, 2200, 2425, 2477
BseJI GATNNNNATC 2 cut(s) 393, 2289
BseLI CCNNNNNNNGG 5 cut(s) 168, 240, 1347, 1441, 1981
BseMI GCAATG 2 cut(s) 1215, 1723
BseMII CTCAG 6 cut(s) 412, 795, 1193, 1650, 2319, 2526
BseNI ACTGG 2 cut(s) 552, 921
BseSI GKGCMC 1 cut(s) 1770
BseX3I CGGCCG 1 cut(s) 665
BseXI GCAGC 6 cut(s) 318, 1144, 1228, 1648, 2458, 2486
BseYI CCCAGC 1 cut(s) 1430
BsgI GTGCAG 1 cut(s) 1655
Bsh1236I CGCG 1 cut(s) 2105
Bsh1285I CGRYCG 1 cut(s) 668
BshFI GGCC 6 cut(s) 90, 172, 244, 667, 1007, 1339
BshNI GGYRCC 1 cut(s) 1618
BsiEI CGRYCG 1 cut(s) 668
BsiHKAI GWGCWC 3 cut(s) 51, 1362, 1770
BsiSI CCGG 1 cut(s) 864
BslFI GGGAC 1 cut(s) 260
BslI CCNNNNNNNGG 5 cut(s) 168, 240, 1347, 1441, 1981
BsmFI GGGAC 1 cut(s) 260
BsmI GAATGC 1 cut(s) 962
BsnI GGCC 6 cut(s) 90, 172, 244, 667, 1007, 1339
Bsp119I TTCGAA 2 cut(s) 254, 2051
Bsp1286I GDGCHC 4 cut(s) 51, 1362, 1707, 1770
Bsp143I GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
Bsp19I CCATGG 2 cut(s) 1785, 2190
BspACI CCGC 6 cut(s) 5, 668, 698, 1283, 1539, 2103
BspANI GGCC 6 cut(s) 90, 172, 244, 667, 1007, 1339
BspCNI CTCAG 6 cut(s) 411, 796, 1194, 1651, 2318, 2527
BspFNI CGCG 1 cut(s) 2105
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 2 cut(s) 1340, 1620
BspMAI CTGCAG 4 cut(s) 1266, 2005, 2344, 2476
BspMI ACCTGC 4 cut(s) 800, 1255, 2008, 2307
BspPI GGATC 2 cut(s) 548, 1682
BspT104I TTCGAA 2 cut(s) 254, 2051
BspT107I GGYRCC 1 cut(s) 1618
BsrDI GCAATG 2 cut(s) 1215, 1723
BsrFI RCCGGY 1 cut(s) 863
BsrI ACTGG 2 cut(s) 552, 921
BssAI RCCGGY 1 cut(s) 863
BssECI CCNNGG 5 cut(s) 85, 1173, 1785, 2190, 2440
BssMI GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
BssNI GRCGYC 1 cut(s) 2526
BssT1I CCWWGG 3 cut(s) 1173, 1785, 2190
Bst2UI CCWGG 3 cut(s) 1442, 1677, 2441
Bst4CI ACNGT 5 cut(s) 296, 528, 1495, 1618, 1750
Bst6I CTCTTC 3 cut(s) 1540, 2148, 2573
BstACI GRCGYC 1 cut(s) 2526
BstBI TTCGAA 2 cut(s) 254, 2051
BstC8I GCNNGC 2 cut(s) 1634, 1897
BstDEI CTNAG 9 cut(s) 21, 398, 725, 804, 1095, 1202, 1659, 2305, 2535
BstDSI CCRYGG 2 cut(s) 1785, 2190
BstF5I GGATG 7 cut(s) 613, 883, 1307, 2128, 2200, 2425, 2477
BstFNI CGCG 1 cut(s) 2105
BstKTI GATC 7 cut(s) 556, 1507, 1690, 1726, 2011, 2224, 2293
BstMBI GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
BstMCI CGRYCG 1 cut(s) 668
BstMWI GCNNNNNNNGC 5 cut(s) 74, 578, 1247, 2186, 2195
BstNI CCWGG 3 cut(s) 1442, 1677, 2441
BstNSI RCATGY 2 cut(s) 1299, 1766
BstSCI CCNGG 3 cut(s) 1440, 1675, 2439
BstSFI CTRYAG 4 cut(s) 1262, 2001, 2340, 2472
BstSLI GKGCMC 1 cut(s) 1770
BstUI CGCG 1 cut(s) 2105
BstV1I GCAGC 6 cut(s) 318, 1144, 1228, 1648, 2458, 2486
BstV2I GAAGAC 4 cut(s) 482, 920, 1670, 2259
BstX2I RGATCY 2 cut(s) 553, 2008
BstYI RGATCY 2 cut(s) 553, 2008
BstZI CGGCCG 1 cut(s) 665
BsuRI GGCC 6 cut(s) 90, 172, 244, 667, 1007, 1339
BtgI CCRYGG 2 cut(s) 1785, 2190
BtgZI GCGATG 1 cut(s) 2382
BtrI CACGTC 1 cut(s) 926
BtsCI GGATG 7 cut(s) 613, 883, 1307, 2128, 2200, 2425, 2477
BtsI GCAGTG 1 cut(s) 2337
BtsIMutI CAGTG 7 cut(s) 301, 1067, 1117, 1835, 2278, 2287, 2337
BveI ACCTGC 4 cut(s) 800, 1255, 2008, 2307
Cac8I GCNNGC 2 cut(s) 1634, 1897
CaiI CAGNNNCTG 2 cut(s) 278, 581
CciI TCATGA 1 cut(s) 1507
Cfr10I RCCGGY 1 cut(s) 863
Cfr13I GGNCC 5 cut(s) 243, 743, 1006, 1338, 1964
CseI GACGC 1 cut(s) 2534
Csp6I GTAC 7 cut(s) 367, 691, 794, 1135, 1236, 1751, 1997
CspCI CAANNNNNGTGG 2 cut(s) 337, 372
CviQI GTAC 7 cut(s) 367, 691, 794, 1135, 1236, 1751, 1997
DdeI CTNAG 9 cut(s) 21, 398, 725, 804, 1095, 1202, 1659, 2305, 2535
DpnI GATC 7 cut(s) 555, 1506, 1689, 1725, 2010, 2223, 2292
DpnII GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
DraI TTTAAA 1 cut(s) 675
DrdI GACNNNNNNGTC 1 cut(s) 2420
DseDI GACNNNNNNGTC 1 cut(s) 2420
EaeI YGGCCR 1 cut(s) 665
EagI CGGCCG 1 cut(s) 665
Eam1104I CTCTTC 3 cut(s) 1540, 2148, 2573
EarI CTCTTC 3 cut(s) 1540, 2148, 2573
EciI GGCGGA 2 cut(s) 20, 1528
EclXI CGGCCG 1 cut(s) 665
Eco130I CCWWGG 3 cut(s) 1173, 1785, 2190
Eco147I AGGCCT 1 cut(s) 172
Eco24I GRGCYC 1 cut(s) 1707
Eco47I GGWCC 2 cut(s) 743, 1964
Eco52I CGGCCG 1 cut(s) 665
Eco57I CTGAAG 9 cut(s) 105, 255, 399, 558, 1341, 1500, 1572, 1758, 2007
EcoRI GAATTC 1 cut(s) 193
EcoRII CCWGG 3 cut(s) 1440, 1675, 2439
EcoT14I CCWWGG 3 cut(s) 1173, 1785, 2190
EcoT22I ATGCAT 1 cut(s) 1297
EcoT38I GRGCYC 1 cut(s) 1707
ErhI CCWWGG 3 cut(s) 1173, 1785, 2190
FalI AAGNNNNNCTT 2 cut(s) 1446, 1478
FaqI GGGAC 1 cut(s) 260
FauNDI CATATG 1 cut(s) 970
FblI GTMKAC 1 cut(s) 1258
Fnu4HI GCNGC 9 cut(s) 332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
FokI GGATG 7 cut(s) 600, 890, 1314, 2135, 2207, 2432, 2464
FriOI GRGCYC 1 cut(s) 1707
Fsp4HI GCNGC 9 cut(s) 332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
FspBI CTAG 3 cut(s) 536, 2225, 2490
GluI GCNGC 9 cut(s) 332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
GsaI CCCAGC 1 cut(s) 1434
GsuI CTGGAG 2 cut(s) 1463, 1698
HaeIII GGCC 6 cut(s) 90, 172, 244, 667, 1007, 1339
HapII CCGG 1 cut(s) 864
HgaI GACGC 1 cut(s) 2534
Hin1I GRCGYC 1 cut(s) 2526
HincII GTYRAC 2 cut(s) 703, 1746
HindII GTYRAC 2 cut(s) 703, 1746
HindIII AAGCTT 2 cut(s) 1560, 1937
HpaI GTTAAC 1 cut(s) 703
HpaII CCGG 1 cut(s) 864
HphI GGTGA 5 cut(s) 277, 646, 830, 2144, 2333
Hpy166II GTNNAC 6 cut(s) 649, 703, 1259, 1746, 1768, 2453
Hpy188III TCNNGA 8 cut(s) 55, 425, 438, 1508, 1865, 2225, 2294, 2495
Hpy8I GTNNAC 6 cut(s) 649, 703, 1259, 1746, 1768, 2453
Hpy99I CGWCG 2 cut(s) 2249, 2405
HpyAV CCTTC 9 cut(s) 82, 279, 619, 1160, 1283, 1782, 2071, 2461, 2533
HpyCH4III ACNGT 5 cut(s) 296, 528, 1495, 1618, 1750
HpyCH4IV ACGT 2 cut(s) 925, 1255
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 578, 1247, 2186, 2195
HpyF3I CTNAG 9 cut(s) 21, 398, 725, 804, 1095, 1202, 1659, 2305, 2535
HpySE526I ACGT 2 cut(s) 925, 1255
Hsp92I GRCGYC 1 cut(s) 2526
KspAI GTTAAC 1 cut(s) 703
Kzo9I GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
LmnI GCTCC 2 cut(s) 508, 1365
Lsp1109I GCAGC 6 cut(s) 318, 1144, 1228, 1648, 2458, 2486
LweI GCATC 9 cut(s) 443, 568, 1062, 1292, 2089, 2185, 2275, 2362, 2486
MaeI CTAG 3 cut(s) 536, 2225, 2490
MaeII ACGT 2 cut(s) 925, 1255
MaeIII GTNAC 3 cut(s) 283, 447, 608
MalI GATC 7 cut(s) 555, 1506, 1689, 1725, 2010, 2223, 2292
MboI GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
MflI RGATCY 2 cut(s) 553, 2008
MhlI GDGCHC 4 cut(s) 51, 1362, 1707, 1770
MluCI AATT 6 cut(s) 193, 383, 717, 1104, 1498, 1920
MlyI GAGTC 5 cut(s) 644, 960, 1379, 1526, 1601
Mph1103I ATGCAT 1 cut(s) 1297
MroXI GAANNNNTTC 2 cut(s) 1464, 1597
MseI TTAA 6 cut(s) 540, 674, 702, 944, 2517, 2596
MslI CAYNNNNRTG 3 cut(s) 359, 1300, 1473
MspA1I CMGCKG 2 cut(s) 1157, 1241
MspI CCGG 1 cut(s) 864
MspR9I CCNGG 3 cut(s) 1442, 1677, 2441
Mva1269I GAATGC 1 cut(s) 962
MvaI CCWGG 3 cut(s) 1442, 1677, 2441
MvnI CGCG 1 cut(s) 2105
MwoI GCNNNNNNNGC 5 cut(s) 74, 578, 1247, 2186, 2195
NcoI CCATGG 2 cut(s) 1785, 2190
NdeI CATATG 1 cut(s) 970
NdeII GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
NlaIV GGNNCC 2 cut(s) 1340, 1620
NmeAIII GCCGAG 1 cut(s) 66
NmuCI GTSAC 2 cut(s) 283, 608
NsiI ATGCAT 1 cut(s) 1297
NspI RCATGY 2 cut(s) 1299, 1766
NspV TTCGAA 2 cut(s) 254, 2051
PagI TCATGA 1 cut(s) 1507
PaqCI CACCTGC 1 cut(s) 800
PceI AGGCCT 1 cut(s) 172
PciI ACATGT 1 cut(s) 1762
PctI GAATGC 1 cut(s) 962
PdmI GAANNNNTTC 2 cut(s) 1464, 1597
PfoI TCCNGGA 1 cut(s) 1440
PkrI GCNGC 9 cut(s) 333, 669, 1159, 1243, 1284, 1638, 2104, 2473, 2476
PleI GAGTC 5 cut(s) 644, 959, 1378, 1526, 1601
PpsI GAGTC 5 cut(s) 644, 959, 1378, 1526, 1601
PscI ACATGT 1 cut(s) 1762
PshBI ATTAAT 1 cut(s) 944
Psp6I CCWGG 3 cut(s) 1440, 1675, 2439
PspFI CCCAGC 1 cut(s) 1430
PspGI CCWGG 3 cut(s) 1440, 1675, 2439
PspN4I GGNNCC 2 cut(s) 1340, 1620
PspPI GGNCC 5 cut(s) 243, 743, 1006, 1338, 1964
PstI CTGCAG 4 cut(s) 1266, 2005, 2344, 2476
PstNI CAGNNNCTG 2 cut(s) 278, 581
PsuI RGATCY 2 cut(s) 553, 2008
PvuII CAGCTG 2 cut(s) 1157, 1241
RsaI GTAC 7 cut(s) 368, 692, 795, 1136, 1237, 1752, 1998
RsaNI GTAC 7 cut(s) 367, 691, 794, 1135, 1236, 1751, 1997
RseI CAYNNNNRTG 3 cut(s) 359, 1300, 1473
SaqAI TTAA 6 cut(s) 540, 674, 702, 944, 2517, 2596
SatI GCNGC 9 cut(s) 332, 668, 1158, 1242, 1283, 1637, 2103, 2472, 2475
Sau3AI GATC 7 cut(s) 553, 1504, 1687, 1723, 2008, 2221, 2290
Sau96I GGNCC 5 cut(s) 243, 743, 1006, 1338, 1964
ScaI AGTACT 1 cut(s) 1752
SchI GAGTC 5 cut(s) 644, 960, 1379, 1526, 1601
ScrFI CCNGG 3 cut(s) 1442, 1677, 2441
SduI GDGCHC 4 cut(s) 51, 1362, 1707, 1770
SfaNI GCATC 9 cut(s) 443, 568, 1062, 1292, 2089, 2185, 2275, 2362, 2486
SfcI CTRYAG 4 cut(s) 1262, 2001, 2340, 2472
SfuI TTCGAA 2 cut(s) 254, 2051
SinI GGWCC 2 cut(s) 743, 1964
SmiMI CAYNNNNRTG 3 cut(s) 359, 1300, 1473
SmlI CTYRAG 3 cut(s) 53, 425, 1388
SmoI CTYRAG 3 cut(s) 53, 425, 1388
Sse9I AATT 6 cut(s) 193, 383, 717, 1104, 1498, 1920
SseBI AGGCCT 1 cut(s) 172
SsiI CCGC 6 cut(s) 5, 668, 698, 1283, 1539, 2103
SspI AATATT 1 cut(s) 1816
SspMI CTAG 3 cut(s) 536, 2225, 2490
StuI AGGCCT 1 cut(s) 172
StyD4I CCNGG 3 cut(s) 1440, 1675, 2439
StyI CCWWGG 3 cut(s) 1173, 1785, 2190
TaaI ACNGT 5 cut(s) 296, 528, 1495, 1618, 1750
TaiI ACGT 2 cut(s) 928, 1258
TaqI TCGA 5 cut(s) 45, 138, 211, 254, 2051
TaqII GACCGA 1 cut(s) 842
TasI AATT 6 cut(s) 193, 383, 717, 1104, 1498, 1920
TatI WGTACW 2 cut(s) 1134, 1750
TauI GCSGC 3 cut(s) 670, 1285, 2105
Tru1I TTAA 6 cut(s) 540, 674, 702, 944, 2517, 2596
Tru9I TTAA 6 cut(s) 540, 674, 702, 944, 2517, 2596
TscAI CASTG 7 cut(s) 301, 1074, 1117, 1842, 2278, 2287, 2344
TseFI GTSAC 2 cut(s) 283, 608
TseI GCWGC 6 cut(s) 331, 1157, 1241, 1636, 2471, 2474
Tsp45I GTSAC 2 cut(s) 283, 608
TspGWI ACGGA 1 cut(s) 2470
TspRI CASTG 7 cut(s) 301, 1074, 1117, 1842, 2278, 2287, 2344
VneI GTGCAC 1 cut(s) 1766
VpaK11BI GGWCC 2 cut(s) 743, 1964
VspI ATTAAT 1 cut(s) 944
XapI RAATTY 3 cut(s) 193, 383, 717
XbaI TCTAGA 1 cut(s) 2224
XceI RCATGY 2 cut(s) 1299, 1766
XcmI CCANNNNNNNNNTGG 1 cut(s) 1438
XmiI GTMKAC 1 cut(s) 1258
XmnI GAANNNNTTC 2 cut(s) 1464, 1597
XspI CTAG 3 cut(s) 536, 2225, 2490
ZrmI AGTACT 1 cut(s) 1752
Zsp2I ATGCAT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.