Rmu_sc0002188.1_g000001

TAF RNA Polymerase I subunit A

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002188.1
OG0002593
Physical Location & Seq
Reverse (-)
2122 .. 8822
6701 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1836 bp
atggctgaatctcccataccagaaattccgattattcccgaaagccggaaaagaaagtacaccgacgacggcggcgaggcagcactgtcggggcacctaaaacgcatcgttttatcactaagcaagccgtcgactctgctcggcatcggcgccacaaaacctaggtcggtgcaccgcgccaagctcgaaaagcttctccggaagctcgtgattcaccacaactgggtcgacgccagcggcgtcctcagcgtgttgctcggcggcggagccagcgacaggtcgccggcgaacaaccgcttcatgtattggaggttgtctgagatggaaaaggaggagcgtttacctggtaatttctccaaggaggtgtggattaagaatgtgtttgaatcttgggagaagaagaatggtaagatgaaggcagagttagaagagtacagacatgctgttgaacttgagcgagtctcgctctcgcttgcaaaagggaatcttatggaggctgaagctggtgctttcggtctcatgcaaccaaatggttttcgaaatgaccctcttcgaaatatgattgtcggattgacattccagaaattgtggtattccaagctcccaaaagagatgcagtggagggaggctgaccagttttacactagggaatcaaatgaactagttgcagcctcagaggggcatggctctattaacagtaacgaggctggtagcgccattcattgtgattcagacacctctgtcatgaatgataaagtagagaatgtaccacctattgttgctgttgatgctgacagtggcttacatagagagatctctgtggaggttgttgacatggaagtagaaatttctccaccgaaatttgagacccaaaatttctatgcggactctgctgaaaattcagaagatgaagctgctttatctgatcatggtggtcaaatgcagtatgctcccattttctctgaacttgtggatttgtcattcataatgccagaggggttggagtcactgttactgccaatacgattgccagagtctctcgataatcatgaagataagaatatttttaatgactattacaaggatgcggtgaagtacttacgacatgctcttcactcttcacccccggtattggtagccttacatcctttgatacagctgttgctgattggaggtcaagttaaagaggccctagatgagattgaatattgttgtaatgtttcaaacacagcgctgcctactcgattaaggtctagtcttctgcagcaatttgattctaataacaaacctgtgctttccacttgtctggaggaaaacttaaggaaggatcctacatgttccgattcattggaaaagcttgttctgttgcatcaaaatgatgattatagtcctgagtccctgcttgaaatgatagctttgcatttagatgccaccaatgctgaatacaacatatggagagagtatgctatgtgtttcctgaagctttctcagtatgaagaggacaggatgtcggtgtgtctgaatggaaatgaaggtggacataaaccacggtactctgtttctttcaataagaccccgaaaatatttataaagggacaatctggaaagaattggaaattgcgctgtagatggtggtctacgcggcacttcagccatgatattcttgcatcagagattgcagcaggtgatttggagctcttaacttacaaagcagcgagtgcagtgcatatgtatggatcagagttctattacgttgtggatgctctttgctgcttagagaaagaaattttggatgccttaacgatcaccaaattggctgaaattttgcaaaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAF1_subA

Protein Analysis

611

Amino Acids

68.96

Weight (kDa)

5.37

Isoelectric Point (pI)

43.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF1_subA PF14929 69 - 587 2.8e-70 TAF RNA Polymerase I subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1589
AarI CACCTGC 1 cut(s) 1673
AasI GACNNNNNNGTC 1 cut(s) 740
Acc36I ACCTGC 1 cut(s) 1673
AccB1I GGYRCC 2 cut(s) 93, 149
AccI GTMKAC 3 cut(s) 131, 228, 1637
AccII CGCG 2 cut(s) 177, 1642
AccIII TCCGGA 1 cut(s) 198
AciI CCGC 9 cut(s) 72, 175, 237, 261, 264, 295, 884, 1088, 1642
AclWI GGATC 3 cut(s) 1322, 1335, 1744
AcsI RAATTY 7 cut(s) 24, 846, 860, 874, 898, 1785, 1821
AcuI CTGAAG 3 cut(s) 519, 1499, 1633
AcyI GRCGYC 3 cut(s) 150, 231, 240
AfaI GTAC 5 cut(s) 59, 434, 768, 1097, 1553
AfeI AGCGCT 1 cut(s) 1233
AfiI CCNNNNNNNGG 5 cut(s) 45, 223, 276, 678, 1132
AflII CTTAAG 1 cut(s) 1318
AflIII ACRYGT 1 cut(s) 1334
AgsI TTSAA 6 cut(s) 386, 449, 1205, 1224, 1406, 1567
AhdI GACNNNNNGTC 1 cut(s) 1507
AhlI ACTAGT 1 cut(s) 661
AjnI CCWGG 1 cut(s) 343
AjuI GAANNNNNNNTTGG 2 cut(s) 1772, 1804
Alw21I GWGCWC 2 cut(s) 174, 1698
Alw26I GTCTC 4 cut(s) 466, 521, 860, 1041
Alw44I GTGCAC 1 cut(s) 170
AlwI GGATC 3 cut(s) 1322, 1335, 1744
Aor13HI TCCGGA 1 cut(s) 198
Aor51HI AGCGCT 1 cut(s) 1233
AoxI GGCC 1 cut(s) 1188
ApaLI GTGCAC 1 cut(s) 170
ApeKI GCWGC 8 cut(s) 80, 668, 914, 1234, 1264, 1679, 1712, 1770
ApoI RAATTY 7 cut(s) 24, 846, 860, 874, 898, 1785, 1821
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
Asp700I GAANNNNTTC 1 cut(s) 192
AspA2I CCTAGG 1 cut(s) 161
AspLEI GCGC 5 cut(s) 152, 179, 716, 1234, 1623
AspS9I GGNCC 1 cut(s) 1189
AsuC2I CCSGG 1 cut(s) 1127
AsuHPI GGTGA 5 cut(s) 206, 1102, 1113, 1697, 1798
AsuII TTCGAA 2 cut(s) 538, 553
AvrII CCTAGG 1 cut(s) 161
BaeGI GKGCMC 2 cut(s) 96, 174
BaeI ACNNNNGTAYC 2 cut(s) 1145, 1178
BamHI GGATCC 1 cut(s) 1327
BanI GGYRCC 2 cut(s) 93, 149
BanII GRGCYC 1 cut(s) 1698
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 1250
Bbv12I GWGCWC 2 cut(s) 174, 1698
BbvCI CCTCAGC 1 cut(s) 245
BbvI GCAGC 8 cut(s) 92, 680, 901, 1221, 1276, 1691, 1724, 1757
BccI CCATC 2 cut(s) 316, 1623
BceAI ACGGC 2 cut(s) 85, 112
BcgI CGANNNNNNTGC 4 cut(s) 69, 103, 1705, 1739
BciT130I CCWGG 1 cut(s) 345
BclI TGATCA 1 cut(s) 925
BcnI CCSGG 1 cut(s) 1127
BcoDI GTCTC 4 cut(s) 466, 521, 860, 1041
BcuI ACTAGT 1 cut(s) 661
BfaI CTAG 5 cut(s) 162, 645, 662, 1193, 1254
BfmI CTRYAG 2 cut(s) 1262, 1624
BfoI RGCGCY 3 cut(s) 153, 717, 1235
BfrI CTTAAG 1 cut(s) 1318
BfuAI ACCTGC 1 cut(s) 1673
BglII AGATCT 1 cut(s) 813
BlnI CCTAGG 1 cut(s) 161
BmcAI AGTACT 1 cut(s) 1097
Bme1390I CCNGG 2 cut(s) 345, 1127
BmeRI GACNNNNNGTC 1 cut(s) 1507
BmgT120I GGNCC 1 cut(s) 1189
BmiI GGNNCC 4 cut(s) 95, 151, 268, 1329
BmrFI CCNGG 2 cut(s) 345, 1127
BmrI ACTGGG 1 cut(s) 232
BmuI ACTGGG 1 cut(s) 232
BpiI GAAGAC 1 cut(s) 1250
BplI GAGNNNNNCTC 4 cut(s) 446, 478, 450, 482
BpmI CTGGAG 1 cut(s) 1328
Bpu10I CCTNAGC 1 cut(s) 245
Bpu14I TTCGAA 2 cut(s) 538, 553
BpuEI CTTGAG 1 cut(s) 473
BpuMI CCSGG 1 cut(s) 1127
BsaHI GRCGYC 3 cut(s) 150, 231, 240
BsaI GGTCTC 2 cut(s) 521, 860
BsaJI CCNNGG 4 cut(s) 161, 357, 1125, 1547
BsaWI WCCGGW 1 cut(s) 198
BsaXI ACNNNNNCTCC 4 cut(s) 995, 1025, 1164, 1194
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 223, 276, 678, 1132
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 2 cut(s) 227, 634
BseAI TCCGGA 1 cut(s) 198
BseBI CCWGG 1 cut(s) 345
BseDI CCNNGG 4 cut(s) 161, 357, 1125, 1547
BseGI GGATG 5 cut(s) 1090, 1144, 1512, 1765, 1798
BseLI CCNNNNNNNGG 5 cut(s) 45, 223, 276, 678, 1132
BseMII CTCAG 5 cut(s) 259, 309, 687, 1383, 1502
BseNI ACTGG 2 cut(s) 227, 634
BseRI GAGGAG 1 cut(s) 347
BseSI GKGCMC 2 cut(s) 96, 174
BseXI GCAGC 8 cut(s) 92, 680, 901, 1221, 1276, 1691, 1724, 1757
BsgI GTGCAG 1 cut(s) 1740
Bsh1236I CGCG 2 cut(s) 177, 1642
BshFI GGCC 1 cut(s) 1190
BshNI GGYRCC 2 cut(s) 93, 149
BsiHKAI GWGCWC 2 cut(s) 174, 1698
BsiSI CCGG 4 cut(s) 46, 199, 284, 1127
BslFI GGGAC 2 cut(s) 1381, 1608
BslI CCNNNNNNNGG 5 cut(s) 45, 223, 276, 678, 1132
BsmAI GTCTC 4 cut(s) 466, 521, 860, 1041
BsmFI GGGAC 2 cut(s) 1381, 1608
BsnI GGCC 1 cut(s) 1190
Bso31I GGTCTC 2 cut(s) 521, 860
Bsp119I TTCGAA 2 cut(s) 538, 553
Bsp1286I GDGCHC 3 cut(s) 96, 174, 1698
Bsp13I TCCGGA 1 cut(s) 198
Bsp143I GATC 5 cut(s) 813, 925, 1327, 1736, 1803
BspACI CCGC 9 cut(s) 72, 175, 237, 261, 264, 295, 884, 1088, 1642
BspANI GGCC 1 cut(s) 1190
BspCNI CTCAG 5 cut(s) 258, 310, 686, 1384, 1501
BspEI TCCGGA 1 cut(s) 198
BspFNI CGCG 2 cut(s) 177, 1642
BspHI TCATGA 2 cut(s) 744, 1048
BspLI GGNNCC 4 cut(s) 95, 151, 268, 1329
BspMAI CTGCAG 1 cut(s) 1266
BspMI ACCTGC 1 cut(s) 1673
BspPI GGATC 3 cut(s) 1322, 1335, 1744
BspQI GCTCTTC 1 cut(s) 1116
BspT104I TTCGAA 2 cut(s) 538, 553
BspT107I GGYRCC 2 cut(s) 93, 149
BspTI CTTAAG 1 cut(s) 1318
BspTNI GGTCTC 2 cut(s) 521, 860
BsrFI RCCGGY 1 cut(s) 283
BsrI ACTGG 2 cut(s) 227, 634
BssAI RCCGGY 1 cut(s) 283
BssECI CCNNGG 4 cut(s) 161, 357, 1125, 1547
BssMI GATC 5 cut(s) 813, 925, 1327, 1736, 1803
BssNI GRCGYC 3 cut(s) 150, 231, 240
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 161, 357
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 345
Bst4CI ACNGT 5 cut(s) 87, 698, 797, 1011, 1551
Bst6I CTCTTC 5 cut(s) 423, 555, 1116, 1123, 1491
BstACI GRCGYC 3 cut(s) 150, 231, 240
BstAFI CTTAAG 1 cut(s) 1318
BstAPI GCANNNNNTGC 1 cut(s) 1718
BstBI TTCGAA 2 cut(s) 538, 553
BstC8I GCNNGC 5 cut(s) 125, 235, 271, 285, 474
BstDEI CTNAG 7 cut(s) 119, 245, 318, 673, 1392, 1488, 1774
BstDSI CCRYGG 1 cut(s) 1547
BstF5I GGATG 5 cut(s) 1090, 1144, 1512, 1765, 1798
BstFNI CGCG 2 cut(s) 177, 1642
BstH2I RGCGCY 3 cut(s) 153, 717, 1235
BstHHI GCGC 5 cut(s) 152, 179, 716, 1234, 1623
BstKTI GATC 5 cut(s) 816, 928, 1330, 1739, 1806
BstMAI GTCTC 4 cut(s) 466, 521, 860, 1041
BstMBI GATC 5 cut(s) 813, 925, 1327, 1736, 1803
BstMWI GCNNNNNNNGC 9 cut(s) 190, 246, 270, 463, 713, 788, 890, 1436, 1718
BstNI CCWGG 1 cut(s) 345
BstNSI RCATGY 3 cut(s) 443, 1109, 1338
BstSCI CCNGG 2 cut(s) 343, 1125
BstSFI CTRYAG 2 cut(s) 1262, 1624
BstSLI GKGCMC 2 cut(s) 96, 174
BstUI CGCG 2 cut(s) 177, 1642
BstV1I GCAGC 8 cut(s) 92, 680, 901, 1221, 1276, 1691, 1724, 1757
BstV2I GAAGAC 1 cut(s) 1250
BstX2I RGATCY 2 cut(s) 813, 1327
BstXI CCANNNNNNTGG 1 cut(s) 1306
BstYI RGATCY 2 cut(s) 813, 1327
BsuRI GGCC 1 cut(s) 1190
BtgI CCRYGG 1 cut(s) 1547
BtsCI GGATG 5 cut(s) 1090, 1144, 1512, 1765, 1798
BtsI GCAGTG 2 cut(s) 623, 1728
BtsIMutI CAGTG 5 cut(s) 83, 623, 802, 1007, 1728
BveI ACCTGC 1 cut(s) 1673
Cac8I GCNNGC 5 cut(s) 125, 235, 271, 285, 474
CciI TCATGA 2 cut(s) 744, 1048
CfoI GCGC 5 cut(s) 152, 179, 716, 1234, 1623
Cfr10I RCCGGY 1 cut(s) 283
Cfr13I GGNCC 1 cut(s) 1189
CseI GACGC 2 cut(s) 229, 239
CsiI ACCWGGT 1 cut(s) 343
Csp6I GTAC 5 cut(s) 58, 433, 767, 1096, 1552
CviQI GTAC 5 cut(s) 58, 433, 767, 1096, 1552
DdeI CTNAG 7 cut(s) 119, 245, 318, 673, 1392, 1488, 1774
DinI GGCGCC 1 cut(s) 151
DpnI GATC 5 cut(s) 815, 927, 1329, 1738, 1805
DpnII GATC 5 cut(s) 813, 925, 1327, 1736, 1803
DrdI GACNNNNNNGTC 1 cut(s) 740
DriI GACNNNNNGTC 1 cut(s) 1507
DseDI GACNNNNNNGTC 1 cut(s) 740
Eam1104I CTCTTC 5 cut(s) 423, 555, 1116, 1123, 1491
Eam1105I GACNNNNNGTC 1 cut(s) 1507
EarI CTCTTC 5 cut(s) 423, 555, 1116, 1123, 1491
EciI GGCGGA 1 cut(s) 279
Ecl136II GAGCTC 1 cut(s) 1696
Eco130I CCWWGG 2 cut(s) 161, 357
Eco24I GRGCYC 1 cut(s) 1698
Eco31I GGTCTC 2 cut(s) 521, 860
Eco47III AGCGCT 1 cut(s) 1233
Eco53kI GAGCTC 1 cut(s) 1696
Eco57I CTGAAG 3 cut(s) 519, 1499, 1633
EcoICRI GAGCTC 1 cut(s) 1696
EcoO109I RGGNCCY 1 cut(s) 1189
EcoRII CCWGG 1 cut(s) 343
EcoT14I CCWWGG 2 cut(s) 161, 357
EcoT38I GRGCYC 1 cut(s) 1698
EgeI GGCGCC 1 cut(s) 151
EheI GGCGCC 1 cut(s) 151
ErhI CCWWGG 2 cut(s) 161, 357
FalI AAGNNNNNCTT 2 cut(s) 471, 503
FaqI GGGAC 2 cut(s) 1381, 1608
FauNDI CATATG 2 cut(s) 1451, 1728
FbaI TGATCA 1 cut(s) 925
FblI GTMKAC 3 cut(s) 131, 228, 1637
FokI GGATG 5 cut(s) 1097, 1131, 1519, 1772, 1805
FriOI GRGCYC 1 cut(s) 1698
FspBI CTAG 5 cut(s) 162, 645, 662, 1193, 1254
GlaI GCGC 5 cut(s) 151, 178, 715, 1233, 1622
GsuI CTGGAG 1 cut(s) 1328
HaeII RGCGCY 3 cut(s) 153, 717, 1235
HaeIII GGCC 1 cut(s) 1190
HapII CCGG 4 cut(s) 46, 199, 284, 1127
HgaI GACGC 2 cut(s) 229, 239
HhaI GCGC 5 cut(s) 152, 179, 716, 1234, 1623
Hin1I GRCGYC 3 cut(s) 150, 231, 240
Hin6I GCGC 5 cut(s) 150, 177, 714, 1232, 1621
HinP1I GCGC 5 cut(s) 150, 177, 714, 1232, 1621
HincII GTYRAC 3 cut(s) 132, 229, 832
HindII GTYRAC 3 cut(s) 132, 229, 832
HindIII AAGCTT 3 cut(s) 191, 1355, 1481
HpaII CCGG 4 cut(s) 46, 199, 284, 1127
HphI GGTGA 5 cut(s) 206, 1102, 1113, 1697, 1798
Hpy166II GTNNAC 8 cut(s) 60, 132, 172, 229, 341, 832, 1538, 1638
Hpy8I GTNNAC 8 cut(s) 60, 132, 172, 229, 341, 832, 1538, 1638
Hpy99I CGWCG 4 cut(s) 68, 71, 133, 233
HpyAV CCTTC 3 cut(s) 409, 1318, 1526
HpyCH4III ACNGT 5 cut(s) 87, 698, 797, 1011, 1551
HpyCH4IV ACGT 1 cut(s) 1752
HpyF10VI GCNNNNNNNGC 9 cut(s) 190, 246, 270, 463, 713, 788, 890, 1436, 1718
HpyF3I CTNAG 7 cut(s) 119, 245, 318, 673, 1392, 1488, 1774
HpySE526I ACGT 1 cut(s) 1752
Hsp92I GRCGYC 3 cut(s) 150, 231, 240
HspAI GCGC 5 cut(s) 150, 177, 714, 1232, 1621
KasI GGCGCC 1 cut(s) 149
Kpn2I TCCGGA 1 cut(s) 198
KroI GCCGGC 1 cut(s) 283
KroNI GCCGGC 1 cut(s) 285
Ksp22I TGATCA 1 cut(s) 925
Kzo9I GATC 5 cut(s) 813, 925, 1327, 1736, 1803
LguI GCTCTTC 1 cut(s) 1116
LmnI GCTCC 5 cut(s) 266, 334, 606, 955, 1693
Lsp1109I GCAGC 8 cut(s) 92, 680, 901, 1221, 1276, 1691, 1724, 1757
MabI ACCWGGT 1 cut(s) 343
MaeI CTAG 5 cut(s) 162, 645, 662, 1193, 1254
MaeII ACGT 1 cut(s) 1752
MaeIII GTNAC 3 cut(s) 698, 1005, 1011
MalI GATC 5 cut(s) 815, 927, 1329, 1738, 1805
MboI GATC 5 cut(s) 813, 925, 1327, 1736, 1803
MflI RGATCY 2 cut(s) 813, 1327
MhlI GDGCHC 3 cut(s) 96, 174, 1698
Mly113I GGCGCC 1 cut(s) 150
MlyI GAGTC 6 cut(s) 127, 468, 881, 1013, 1043, 1403
MmeI TCCRAC 2 cut(s) 547, 981
MreI CGCCGGCG 1 cut(s) 283
MroI TCCGGA 1 cut(s) 198
MroNI GCCGGC 1 cut(s) 283
MroXI GAANNNNTTC 1 cut(s) 192
MseI TTAA 8 cut(s) 372, 693, 1068, 1182, 1247, 1319, 1700, 1799
MslI CAYNNNNRTG 3 cut(s) 1374, 1425, 1731
MspA1I CMGCKG 2 cut(s) 237, 1159
MspCI CTTAAG 1 cut(s) 1318
MspI CCGG 4 cut(s) 46, 199, 284, 1127
MspR9I CCNGG 2 cut(s) 345, 1127
MvaI CCWGG 1 cut(s) 345
MvnI CGCG 2 cut(s) 177, 1642
MwoI GCNNNNNNNGC 9 cut(s) 190, 246, 270, 463, 713, 788, 890, 1436, 1718
NaeI GCCGGC 1 cut(s) 285
NarI GGCGCC 1 cut(s) 150
NciI CCSGG 1 cut(s) 1127
NdeI CATATG 2 cut(s) 1451, 1728
NdeII GATC 5 cut(s) 813, 925, 1327, 1736, 1803
NgoMIV GCCGGC 1 cut(s) 283
NlaIV GGNNCC 4 cut(s) 95, 151, 268, 1329
NmeAIII GCCGAG 2 cut(s) 120, 237
NmuCI GTSAC 1 cut(s) 1005
NspI RCATGY 3 cut(s) 443, 1109, 1338
NspV TTCGAA 2 cut(s) 538, 553
PagI TCATGA 2 cut(s) 744, 1048
PaqCI CACCTGC 1 cut(s) 1673
PciI ACATGT 1 cut(s) 1334
PciSI GCTCTTC 1 cut(s) 1116
PcsI WCGNNNNNNNCGW 2 cut(s) 72, 237
PdiI GCCGGC 1 cut(s) 285
PdmI GAANNNNTTC 1 cut(s) 192
PfeI GAWTC 8 cut(s) 8, 211, 386, 484, 650, 728, 1274, 1343
PleI GAGTC 6 cut(s) 127, 467, 881, 1012, 1042, 1402
PluTI GGCGCC 1 cut(s) 153
PpsI GAGTC 6 cut(s) 127, 467, 881, 1012, 1042, 1402
PscI ACATGT 1 cut(s) 1334
PsiI TTATAA 1 cut(s) 1589
Psp124BI GAGCTC 1 cut(s) 1698
Psp6I CCWGG 1 cut(s) 343
PspGI CCWGG 1 cut(s) 343
PspN4I GGNNCC 4 cut(s) 95, 151, 268, 1329
PspPI GGNCC 1 cut(s) 1189
PstI CTGCAG 1 cut(s) 1266
PsuI RGATCY 2 cut(s) 813, 1327
PvuII CAGCTG 1 cut(s) 1159
RsaI GTAC 5 cut(s) 59, 434, 768, 1097, 1553
RsaNI GTAC 5 cut(s) 58, 433, 767, 1096, 1552
RseI CAYNNNNRTG 3 cut(s) 1374, 1425, 1731
SacI GAGCTC 1 cut(s) 1698
SalI GTCGAC 2 cut(s) 130, 227
SapI GCTCTTC 1 cut(s) 1116
SaqAI TTAA 8 cut(s) 372, 693, 1068, 1182, 1247, 1319, 1700, 1799
Sau3AI GATC 5 cut(s) 813, 925, 1327, 1736, 1803
Sau96I GGNCC 1 cut(s) 1189
ScaI AGTACT 1 cut(s) 1097
SchI GAGTC 6 cut(s) 127, 468, 881, 1013, 1043, 1403
ScrFI CCNGG 2 cut(s) 345, 1127
SduI GDGCHC 3 cut(s) 96, 174, 1698
SexAI ACCWGGT 1 cut(s) 343
SfcI CTRYAG 2 cut(s) 1262, 1624
SfoI GGCGCC 1 cut(s) 151
SfuI TTCGAA 2 cut(s) 538, 553
SgrAI CRCCGGYG 1 cut(s) 283
SmiMI CAYNNNNRTG 3 cut(s) 1374, 1425, 1731
SmlI CTYRAG 2 cut(s) 452, 1318
SmoI CTYRAG 2 cut(s) 452, 1318
SpeI ACTAGT 1 cut(s) 661
SsiI CCGC 9 cut(s) 72, 175, 237, 261, 264, 295, 884, 1088, 1642
SspDI GGCGCC 1 cut(s) 149
SspI AATATT 3 cut(s) 1063, 1208, 1584
SspMI CTAG 5 cut(s) 162, 645, 662, 1193, 1254
SstI GAGCTC 1 cut(s) 1698
StyD4I CCNGG 2 cut(s) 343, 1125
StyI CCWWGG 2 cut(s) 161, 357
TaaI ACNGT 5 cut(s) 87, 698, 797, 1011, 1551
TaiI ACGT 1 cut(s) 1755
TaqI TCGA 7 cut(s) 131, 186, 228, 538, 553, 1041, 1243
TaqII GACCGA 1 cut(s) 503
TatI WGTACW 3 cut(s) 57, 432, 1095
TauI GCSGC 4 cut(s) 75, 240, 264, 1645
TfiI GAWTC 8 cut(s) 8, 211, 386, 484, 650, 728, 1274, 1343
Tru1I TTAA 8 cut(s) 372, 693, 1068, 1182, 1247, 1319, 1700, 1799
Tru9I TTAA 8 cut(s) 372, 693, 1068, 1182, 1247, 1319, 1700, 1799
TscAI CASTG 5 cut(s) 90, 623, 802, 1014, 1728
TseFI GTSAC 1 cut(s) 1005
TseI GCWGC 8 cut(s) 80, 668, 914, 1234, 1264, 1679, 1712, 1770
Tsp45I GTSAC 1 cut(s) 1005
TspRI CASTG 5 cut(s) 90, 623, 802, 1014, 1728
Vha464I CTTAAG 1 cut(s) 1318
VneI GTGCAC 1 cut(s) 170
XapI RAATTY 7 cut(s) 24, 846, 860, 874, 898, 1785, 1821
XceI RCATGY 3 cut(s) 443, 1109, 1338
XmaJI CCTAGG 1 cut(s) 161
XmiI GTMKAC 3 cut(s) 131, 228, 1637
XmnI GAANNNNTTC 1 cut(s) 192
XspI CTAG 5 cut(s) 162, 645, 662, 1193, 1254
ZrmI AGTACT 1 cut(s) 1097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.