Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002979.1

Orthogroup ID

OG0005798

Physical Location & Seq

Genomic Coordinates Reverse (-)

5467 .. 9150

Gene Structure 3684 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

atggagacctcaaatccccggtcgttcttccaaggcatcagatccagagagctacacggatcccgagttccgaagcggtcctacatcgattgcctggcttcggatttctccgaaattggagccattgcagccgagcacaacggacctccgatggccatttcgttcggcaagaccagtagaaactctcacatcgtcgccatgtctgatgaggatgggtacctgagcttgttcgatactcgtcgcaagttctcggcatctgcatctcaccgggaaaatgcagatagaaccaaggtttacgattgggttgtgcatcaaaatgccgtgtttgacatctgttggataaaggatgatactcagattgtgacagcttctggtgatcaaactgtcaaggtatgggatattcaggaaaagaaatgtactgcagttctggtggggcacactggaagtgtgaagtctttgagtcctcatccgactaatcctgagattatcgtctccggttcaagagatggctcctttgctctctgggatatgagatgtaattcaacatccaaaaatacgcttgcggagctctgcatatgtgttgtcaagttctgggacactagaagtttgaaaagtatagtcacacagacatgtcctcatatggagtcaaatgagaagctagaaaagggtcctatgcaatccttctctggaggccggattgaatctttttttgtaaagtcggctattagccctgatgctgctcacatactcagtggttctagtgatggaaacgcctacatttggcaggtaaacaagcctcaagaagatccagtaatattgaaaagccatgacggagaagttacagcagttgattggtcccattttgaggttgggaagatagcaacttcttcagatgattttacggttcgcatctggaactctgagaatcgttactgcccaagcacaccatcaccatctgcaattcgaagaagaataatggcaatcccaggtgcagaatgtagaaggcttctgatgaatgaatcaatgcatatctcaaaggattccagaaattcctgtcccttggatgaaggactagatgaaagtaactcacttcatccaattaaaatgcctaaaatctgtactcctgaatcacagaagaagcaatccaagttagattctgacatgagtgaaatgtttgaaaagacccctgaagctacattgaagagcccctcttctgttctgaaccctccctcctctctaaaaaggaaaactatccgtgattactttgcagcacctactctgaacttgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000077 GO:0000151 GO:0000209 GO:0000731 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006464 GO:0006508 GO:0006511 GO:0006513 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010564 GO:0010948 GO:0015630 GO:0016567 GO:0018130 GO:0019438 GO:0019538 GO:0019941 GO:0019985 GO:0023052 GO:0030163 GO:0031461 GO:0031464 GO:0031465 GO:0031570 GO:0031572 GO:0032446 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0045786 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0051726 GO:0065007 GO:0070647 GO:0071704 GO:0071897 GO:0072395 GO:0072401 GO:0072422 GO:0072425 GO:0080008 GO:0090304 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901987 GO:1901988 GO:1902494 GO:1902749 GO:1902750 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

429

Amino Acids

47.74

Weight (kDa)

6.89

Isoelectric Point (pI)

52.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	51 - 184	2.6e-18	WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	55 - 184	2.9e-11	CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz	PF24807	56 - 208	1.4e-14	CDC20/Fizzy WD40 domain
WDR55	PF24796	92 - 264	3.7e-09	WDR55
Beta-prop_WDR3_1st	PF25173	97 - 177	1.9e-14	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	98 - 182	6.5e-15	Prp19 WD40 domain
WD40	PF00400	100 - 133	5.7e-06	WD domain, G-beta repeat
Beta-prop_TEP1_2nd	PF25047	102 - 179	2.4e-08	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	103 - 177	7e-08	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	104 - 182	3.2e-16	THOC3 beta-propeller domain
WD40_Gbeta	PF25391	105 - 306	3.8e-18	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	106 - 286	1.6e-14	WDHD1 first WD40 domain
Beta-prop_WDR75_1st	PF23869	116 - 187	4.8e-06	WD repeat-containing protein 75 first beta-propeller
Beta-prop_TEP1_C	PF25048	117 - 169	3.5e-06	TEP-1 C-terminal beta-propeller
Beta-prop_SCAP	PF24017	119 - 181	8.1e-06	SCAP Beta-propeller
WD40	PF00400	138 - 176	8.4e-07	WD domain, G-beta repeat
Beta-prop_EML_2	PF23414	152 - 309	5.3e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40_MABP1-WDR62_2nd	PF24782	163 - 311	1.4e-06	MABP1/WDR62 second WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	231 - 312	6.2e-07	CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz	PF24807	241 - 311	3.1e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	241 - 315	3.1e-08	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	241 - 312	4.3e-09	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	241 - 315	4e-10	THOC3 beta-propeller domain
WD40_Prp19	PF24814	245 - 312	5.4e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27640 AT3G27640
fragaria_vesca	FvH4_6g51280 FvH4_6g51280 FvH4_6g51280 FvH4_6g51280
malus_domestica	MD09G1027800.v1.1 MD17G1027700.v1.1 MD17G1028200.v1.1
prunus_persica	Prupe.3G290400_v2.0.a1 Prupe.3G291000_v2.0.a1
pyrus_communis	pycom111g02180
rosa_chinensis	RchiOBHm_Chr2g0172901
rosa_laevigata	RLG00000022140
rosa_multiflora	Rmu_co8216202.1_g000001 Rmu_sc0002979.1_g000002 Rmu_sc0013380.1_g000001 Rmu_sc0015618.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079450
rosa_rugosa	Rorug02G0563200 Rorug02G0563400
rosa_samantha	Rh2AG640100 Rh2AG640200 Rh2BG653600 Rh2BG653700 Rh2CG619200 Rh2DG667200
rosa_wichuraiana	Rw2G052840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	775
Acc65I	GGTACC	1 cut(s)	216
AccB1I	GGYRCC	1 cut(s)	216
AciI	CCGC	2 cut(s)	76, 563
AclWI	GGATC	4 cut(s)	36, 54, 67, 800
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	1 cut(s)	1048
AcuI	CTGAAG	2 cut(s)	873, 1209
AfaI	GTAC	3 cut(s)	218, 418, 1120
AfiI	CCNNNNNNNGG	3 cut(s)	100, 780, 865
AflIII	ACRYGT	1 cut(s)	629
AgsI	TTSAA	7 cut(s)	501, 543, 610, 701, 820, 1178, 1201
AjnI	CCWGG	2 cut(s)	93, 985
AloI	GAACNNNNNNTCC	4 cut(s)	51, 83, 1214, 1246
AluBI	AGCT	6 cut(s)	52, 225, 368, 568, 658, 1193
AluI	AGCT	6 cut(s)	52, 225, 368, 568, 658, 1193
Alw21I	GWGCWC	2 cut(s)	138, 570
Alw26I	GTCTC	1 cut(s)	496
AlwI	GGATC	4 cut(s)	36, 54, 67, 800
AlwNI	CAGNNNCTG	1 cut(s)	371
Ama87I	CYCGRG	1 cut(s)	63
AoxI	GGCC	2 cut(s)	153, 691
ApeKI	GCWGC	3 cut(s)	128, 737, 1268
ApoI	RAATTY	1 cut(s)	1048
ArsI	GACNNNNNNTTYG	1 cut(s)	37
Asp718I	GGTACC	1 cut(s)	216
AspS9I	GGNCC	4 cut(s)	78, 143, 668, 855
AsuC2I	CCSGG	2 cut(s)	19, 269
AsuHPI	GGTGA	3 cut(s)	257, 386, 942
AsuII	TTCGAA	1 cut(s)	964
AvaI	CYCGRG	1 cut(s)	63
AvaII	GGWCC	4 cut(s)	78, 143, 668, 855
BaeGI	GKGCMC	1 cut(s)	438
BalI	TGGCCA	1 cut(s)	155
BamHI	GGATCC	1 cut(s)	59
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	2 cut(s)	570, 1208
BarI	GAAGNNNNNNTAC	2 cut(s)	65, 97
Bbv12I	GWGCWC	2 cut(s)	138, 570
BbvI	GCAGC	3 cut(s)	140, 724, 1280
BccI	CCATC	6 cut(s)	145, 206, 500, 758, 955, 961
BceAI	ACGGC	1 cut(s)	305
BciT130I	CCWGG	2 cut(s)	95, 987
BclI	TGATCA	1 cut(s)	376
BcnI	CCSGG	2 cut(s)	19, 269
BcoDI	GTCTC	1 cut(s)	496
BfaI	CTAG	4 cut(s)	600, 659, 759, 1073
BfmI	CTRYAG	1 cut(s)	420
BfuAI	ACCTGC	1 cut(s)	775
BisI	GCNGC	3 cut(s)	129, 738, 1269
BlsI	GCNGC	3 cut(s)	130, 739, 1270
Bme1390I	CCNGG	4 cut(s)	19, 95, 269, 987
Bme18I	GGWCC	4 cut(s)	78, 143, 668, 855
BmeT110I	CYCGRG	1 cut(s)	63
BmgT120I	GGNCC	4 cut(s)	78, 143, 668, 855
BmiI	GGNNCC	6 cut(s)	61, 121, 218, 511, 669, 857
BmrFI	CCNGG	4 cut(s)	19, 95, 269, 987
BmsI	GCATC	6 cut(s)	45, 263, 269, 319, 724, 918
BpmI	CTGGAG	1 cut(s)	708
Bpu10I	CCTNAGC	1 cut(s)	221
Bpu14I	TTCGAA	1 cut(s)	964
BpuEI	CTTGAG	1 cut(s)	783
BpuMI	CCSGG	2 cut(s)	19, 269
Bsa29I	ATCGAT	1 cut(s)	87
BsaJI	CCNNGG	5 cut(s)	17, 31, 288, 985, 1059
BsaWI	WCCGGW	1 cut(s)	494
BsaXI	ACNNNNNCTCC	2 cut(s)	1214, 1244
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 780, 865
Bse1I	ACTGG	3 cut(s)	174, 445, 809
Bse3DI	GCAATG	1 cut(s)	123
BseBI	CCWGG	2 cut(s)	95, 987
BseCI	ATCGAT	1 cut(s)	87
BseDI	CCNNGG	5 cut(s)	17, 31, 288, 985, 1059
BseGI	GGATG	6 cut(s)	217, 352, 466, 545, 1069, 1093
BseLI	CCNNNNNNNGG	3 cut(s)	100, 780, 865
BseMI	GCAATG	1 cut(s)	123
BseMII	CTCAG	5 cut(s)	212, 368, 471, 763, 912
BseNI	ACTGG	3 cut(s)	174, 445, 809
BseRI	GAGGAG	1 cut(s)	1222
BseSI	GKGCMC	1 cut(s)	438
BseXI	GCAGC	3 cut(s)	140, 724, 1280
BsgI	GTGCAG	1 cut(s)	1011
Bsh1285I	CGRYCG	1 cut(s)	23
BshFI	GGCC	2 cut(s)	155, 693
BshNI	GGYRCC	1 cut(s)	216
BshVI	ATCGAT	1 cut(s)	87
BsiEI	CGRYCG	1 cut(s)	23
BsiHKAI	GWGCWC	2 cut(s)	138, 570
BsiHKCI	CYCGRG	1 cut(s)	63
BsiSI	CCGG	4 cut(s)	19, 268, 495, 694
BslFI	GGGAC	3 cut(s)	608, 841, 1041
BslI	CCNNNNNNNGG	3 cut(s)	100, 780, 865
BsmAI	GTCTC	1 cut(s)	496
BsmBI	CGTCTC	1 cut(s)	496
BsmFI	GGGAC	3 cut(s)	608, 841, 1041
BsnI	GGCC	2 cut(s)	155, 693
BsoBI	CYCGRG	1 cut(s)	63
Bsp119I	TTCGAA	1 cut(s)	964
Bsp1286I	GDGCHC	4 cut(s)	138, 438, 570, 1208
Bsp143I	GATC	4 cut(s)	41, 59, 376, 805
BspACI	CCGC	2 cut(s)	76, 563
BspANI	GGCC	2 cut(s)	155, 693
BspCNI	CTCAG	5 cut(s)	213, 367, 472, 762, 913
BspDI	ATCGAT	1 cut(s)	87
BspLI	GGNNCC	6 cut(s)	61, 121, 218, 511, 669, 857
BspMAI	CTGCAG	1 cut(s)	424
BspMI	ACCTGC	1 cut(s)	775
BspPI	GGATC	4 cut(s)	36, 54, 67, 800
BspQI	GCTCTTC	1 cut(s)	1196
BspT104I	TTCGAA	1 cut(s)	964
BspT107I	GGYRCC	1 cut(s)	216
BsrDI	GCAATG	1 cut(s)	123
BsrI	ACTGG	3 cut(s)	174, 445, 809
BssECI	CCNNGG	5 cut(s)	17, 31, 288, 985, 1059
BssMI	GATC	4 cut(s)	41, 59, 376, 805
BssT1I	CCWWGG	3 cut(s)	31, 288, 1059
Bst2UI	CCWGG	2 cut(s)	95, 987
Bst4CI	ACNGT	2 cut(s)	385, 904
Bst6I	CTCTTC	2 cut(s)	1196, 1216
BstBI	TTCGAA	1 cut(s)	964
BstC8I	GCNNGC	1 cut(s)	561
BstDEI	CTNAG	5 cut(s)	221, 354, 480, 749, 921
BstF5I	GGATG	6 cut(s)	217, 352, 466, 545, 1069, 1093
BstKTI	GATC	4 cut(s)	44, 62, 379, 808
BstMAI	GTCTC	1 cut(s)	496
BstMBI	GATC	4 cut(s)	41, 59, 376, 805
BstMCI	CGRYCG	1 cut(s)	23
BstMWI	GCNNNNNNNGC	2 cut(s)	128, 565
BstNI	CCWGG	2 cut(s)	95, 987
BstNSI	RCATGY	1 cut(s)	633
BstSCI	CCNGG	4 cut(s)	17, 93, 267, 985
BstSFI	CTRYAG	1 cut(s)	420
BstSLI	GKGCMC	1 cut(s)	438
BstV1I	GCAGC	3 cut(s)	140, 724, 1280
BstX2I	RGATCY	3 cut(s)	41, 59, 805
BstYI	RGATCY	3 cut(s)	41, 59, 805
Bsu15I	ATCGAT	1 cut(s)	87
BsuRI	GGCC	2 cut(s)	155, 693
BsuTUI	ATCGAT	1 cut(s)	87
BtsCI	GGATG	6 cut(s)	217, 352, 466, 545, 1069, 1093
BtsIMutI	CAGTG	2 cut(s)	438, 757
BveI	ACCTGC	1 cut(s)	775
Cac8I	GCNNGC	1 cut(s)	561
CaiI	CAGNNNCTG	1 cut(s)	371
Cfr13I	GGNCC	4 cut(s)	78, 143, 668, 855
ClaI	ATCGAT	1 cut(s)	87
Csp6I	GTAC	3 cut(s)	217, 417, 1119
CviAII	CATG	4 cut(s)	199, 630, 827, 1162
CviQI	GTAC	3 cut(s)	217, 417, 1119
DdeI	CTNAG	5 cut(s)	221, 354, 480, 749, 921
DpnI	GATC	4 cut(s)	43, 61, 378, 807
DpnII	GATC	4 cut(s)	41, 59, 376, 805
EaeI	YGGCCR	1 cut(s)	153
Eam1104I	CTCTTC	2 cut(s)	1196, 1216
EarI	CTCTTC	2 cut(s)	1196, 1216
Ecl136II	GAGCTC	1 cut(s)	568
Eco130I	CCWWGG	3 cut(s)	31, 288, 1059
Eco24I	GRGCYC	2 cut(s)	570, 1208
Eco47I	GGWCC	4 cut(s)	78, 143, 668, 855
Eco53kI	GAGCTC	1 cut(s)	568
Eco57I	CTGAAG	2 cut(s)	873, 1209
Eco88I	CYCGRG	1 cut(s)	63
EcoICRI	GAGCTC	1 cut(s)	568
EcoO109I	RGGNCCY	1 cut(s)	668
EcoRII	CCWGG	2 cut(s)	93, 985
EcoT14I	CCWWGG	3 cut(s)	31, 288, 1059
EcoT22I	ATGCAT	1 cut(s)	1029
EcoT38I	GRGCYC	2 cut(s)	570, 1208
ErhI	CCWWGG	3 cut(s)	31, 288, 1059
Esp3I	CGTCTC	1 cut(s)	496
FaeI	CATG	4 cut(s)	202, 633, 830, 1165
FaqI	GGGAC	3 cut(s)	608, 841, 1041
FatI	CATG	4 cut(s)	198, 629, 826, 1161
FauNDI	CATATG	2 cut(s)	575, 639
FbaI	TGATCA	1 cut(s)	376
Fnu4HI	GCNGC	3 cut(s)	129, 738, 1269
FokI	GGATG	6 cut(s)	224, 359, 453, 532, 1076, 1080
FriOI	GRGCYC	2 cut(s)	570, 1208
Fsp4HI	GCNGC	3 cut(s)	129, 738, 1269
FspBI	CTAG	4 cut(s)	600, 659, 759, 1073
GluI	GCNGC	3 cut(s)	129, 738, 1269
GsuI	CTGGAG	1 cut(s)	708
HaeIII	GGCC	2 cut(s)	155, 693
HapII	CCGG	4 cut(s)	19, 268, 495, 694
Hin1II	CATG	4 cut(s)	202, 633, 830, 1165
HinfI	GANTC	8 cut(s)	460, 644, 701, 925, 1019, 1040, 1127, 1154
HpaII	CCGG	4 cut(s)	19, 268, 495, 694
HphI	GGTGA	3 cut(s)	257, 386, 942
Hpy166II	GTNNAC	2 cut(s)	295, 790
Hpy8I	GTNNAC	2 cut(s)	295, 790
Hpy99I	CGWCG	2 cut(s)	197, 243
HpyAV	CCTTC	3 cut(s)	691, 996, 1061
HpyCH4III	ACNGT	2 cut(s)	385, 904
HpyF10VI	GCNNNNNNNGC	2 cut(s)	128, 565
HpyF3I	CTNAG	5 cut(s)	221, 354, 480, 749, 921
Hsp92II	CATG	4 cut(s)	202, 633, 830, 1165
KpnI	GGTACC	1 cut(s)	220
Ksp22I	TGATCA	1 cut(s)	376
Kzo9I	GATC	4 cut(s)	41, 59, 376, 805
LguI	GCTCTTC	1 cut(s)	1196
LmnI	GCTCC	3 cut(s)	119, 515, 565
Lsp1109I	GCAGC	3 cut(s)	140, 724, 1280
LweI	GCATC	6 cut(s)	45, 263, 269, 319, 724, 918
MaeI	CTAG	4 cut(s)	600, 659, 759, 1073
MaeIII	GTNAC	5 cut(s)	361, 619, 838, 929, 1082
MalI	GATC	4 cut(s)	43, 61, 378, 807
MboI	GATC	4 cut(s)	41, 59, 376, 805
MboII	GAAGA	9 cut(s)	19, 815, 879, 886, 978, 981, 1147, 1203, 1213
MflI	RGATCY	3 cut(s)	41, 59, 805
MhlI	GDGCHC	4 cut(s)	138, 438, 570, 1208
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	5 cut(s)	114, 538, 960, 1048, 1098
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	2 cut(s)	469, 653
MmeI	TCCRAC	2 cut(s)	317, 494
Mox20I	TGGCCA	1 cut(s)	155
Mph1103I	ATGCAT	1 cut(s)	1029
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	1 cut(s)	1101
MslI	CAYNNNNRTG	2 cut(s)	315, 628
Msp20I	TGGCCA	1 cut(s)	155
MspI	CCGG	4 cut(s)	19, 268, 495, 694
MspR9I	CCNGG	4 cut(s)	19, 95, 269, 987
MvaI	CCWGG	2 cut(s)	95, 987
MwoI	GCNNNNNNNGC	2 cut(s)	128, 565
NciI	CCSGG	2 cut(s)	19, 269
NdeI	CATATG	2 cut(s)	575, 639
NdeII	GATC	4 cut(s)	41, 59, 376, 805
NlaIII	CATG	4 cut(s)	202, 633, 830, 1165
NlaIV	GGNNCC	6 cut(s)	61, 121, 218, 511, 669, 857
NmeAIII	GCCGAG	2 cut(s)	157, 230
NmuCI	GTSAC	2 cut(s)	361, 619
NsiI	ATGCAT	1 cut(s)	1029
NspI	RCATGY	1 cut(s)	633
NspV	TTCGAA	1 cut(s)	964
PciI	ACATGT	1 cut(s)	629
PciSI	GCTCTTC	1 cut(s)	1196
PfeI	GAWTC	6 cut(s)	701, 925, 1019, 1040, 1127, 1154
PkrI	GCNGC	3 cut(s)	130, 739, 1270
PleI	GAGTC	2 cut(s)	468, 652
PpsI	GAGTC	2 cut(s)	468, 652
PpuMI	RGGWCCY	1 cut(s)	668
PscI	ACATGT	1 cut(s)	629
Psp124BI	GAGCTC	1 cut(s)	570
Psp5II	RGGWCCY	1 cut(s)	668
Psp6I	CCWGG	2 cut(s)	93, 985
PspGI	CCWGG	2 cut(s)	93, 985
PspN4I	GGNNCC	6 cut(s)	61, 121, 218, 511, 669, 857
PspPI	GGNCC	4 cut(s)	78, 143, 668, 855
PspPPI	RGGWCCY	1 cut(s)	668
PstI	CTGCAG	1 cut(s)	424
PstNI	CAGNNNCTG	1 cut(s)	371
PsuI	RGATCY	3 cut(s)	41, 59, 805
RsaI	GTAC	3 cut(s)	218, 418, 1120
RsaNI	GTAC	3 cut(s)	217, 417, 1119
RseI	CAYNNNNRTG	2 cut(s)	315, 628
SacI	GAGCTC	1 cut(s)	570
SapI	GCTCTTC	1 cut(s)	1196
SaqAI	TTAA	1 cut(s)	1101
SatI	GCNGC	3 cut(s)	129, 738, 1269
Sau3AI	GATC	4 cut(s)	41, 59, 376, 805
Sau96I	GGNCC	4 cut(s)	78, 143, 668, 855
SchI	GAGTC	2 cut(s)	469, 653
ScrFI	CCNGG	4 cut(s)	19, 95, 269, 987
SduI	GDGCHC	4 cut(s)	138, 438, 570, 1208
SfaNI	GCATC	6 cut(s)	45, 263, 269, 319, 724, 918
SfcI	CTRYAG	1 cut(s)	420
SfuI	TTCGAA	1 cut(s)	964
SinI	GGWCC	4 cut(s)	78, 143, 668, 855
SmiMI	CAYNNNNRTG	2 cut(s)	315, 628
SmlI	CTYRAG	1 cut(s)	798
SmoI	CTYRAG	1 cut(s)	798
Sse9I	AATT	5 cut(s)	114, 538, 960, 1048, 1098
SsiI	CCGC	2 cut(s)	76, 563
SspI	AATATT	1 cut(s)	816
SspMI	CTAG	4 cut(s)	600, 659, 759, 1073
SstI	GAGCTC	1 cut(s)	570
StyD4I	CCNGG	4 cut(s)	17, 93, 267, 985
StyI	CCWWGG	3 cut(s)	31, 288, 1059
TaaI	ACNGT	2 cut(s)	385, 904
TaqI	TCGA	3 cut(s)	87, 231, 964
TasI	AATT	5 cut(s)	114, 538, 960, 1048, 1098
TatI	WGTACW	2 cut(s)	416, 1118
TfiI	GAWTC	6 cut(s)	701, 925, 1019, 1040, 1127, 1154
Tru1I	TTAA	1 cut(s)	1101
Tru9I	TTAA	1 cut(s)	1101
TscAI	CASTG	2 cut(s)	445, 757
TseFI	GTSAC	2 cut(s)	361, 619
TseI	GCWGC	3 cut(s)	128, 737, 1268
Tsp45I	GTSAC	2 cut(s)	361, 619
TspDTI	ATGAA	5 cut(s)	1028, 1032, 1080, 1082, 1092
TspGWI	ACGGA	4 cut(s)	72, 156, 846, 1244
TspRI	CASTG	2 cut(s)	445, 757
VpaK11BI	GGWCC	4 cut(s)	78, 143, 668, 855
XapI	RAATTY	1 cut(s)	1048
XceI	RCATGY	1 cut(s)	633
XcmI	CCANNNNNNNNNTGG	1 cut(s)	866
XspI	CTAG	4 cut(s)	600, 659, 759, 1073
Zsp2I	ATGCAT	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.