Rmu_sc0003526.1_g000014

Nodulin-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003526.1
Physical Location & Seq
Forward (+)
90457 .. 93223
2767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003526.1_g000014.1.cds

Sequence Viewer

Length: 1671 bp
atggaagctagactaaagaatctgacacggtccaaatgggtgtctacggtggcgagcatatggatacagtgcaccagcggcaccctatacaccttctccgtctactctcagaccctcaagaccacacagggctacgatcagtcaactctcgacactgtttctgtgttcaaggactttggagccaactgtgggattctgtctggtgttctctattcttatagtgtctcgtgggctggaccttgggttgtcctactggctggagcagtccagtgctttttgggctactttctgatgtgggccgccgtggtcggacttattccccggcctccggtggtggtgatgtgtcttttcatgttgctagcggcacatgctcagtcgttcttcaacacttctaatgcggtcactggtgtcagtaacttcccttattataaaggcaccattgttggcatcatgaagggatttcttggtctgagtggagcaatagtagttcaaatatatcagatctttatgtacaaaaaaaccacttcatatcttctgatgctagcactgctgcctccaataaatactttgttgcttatgtggtttgtgagaatccgcaacacgaaggaaggaaacgagaagcagcatctggatagtctctcgataattgctcttgttgttgcggcttaccttatgtgcattatactattagagaactttatcactctgccattagccatacgtgttgttggttttgttgtacttgtattgctgcttgcctcgcctctttgtgttgtaatcagagcacatcaaggggagttggatagtgtttcagagcctttcttagctgaggttgaccgtttagaagatggtaatgataaaaggagtttgcggtctgatatacacctgaatctattacaagcaatgtgcacaatagacttctggatgttgtttattgccatggtatgtggaatgggctcgggacttgcagtggttaataatcttagccaaataggacaatcgcttggttacagaaactttgagataagtactttggtttctttgctgagcatatggaatttctttggtcgtttgggagctggatatatatcggattgtttcctgcatcggaaaggatgggcaaggccattgttcatggtcatcactctagcatccatgagcattggccatctggtgattgcttctggtatgcctggtgctctctatactggatctgtattggtgggtgtgtgttacggttctcaatggtcactaatgccaacaatcacttctgagatatttggtgtgctacatatggggaccatcttcaatgccattaccattgccagtcctgttggatcttatatcttttctgtgagagtgataggatatatttatgacaaggaggtatcagaaccagagaatacatgctttggaactcaatgctttatgttatcattccttattatggcagctgctaccctttttggggctcttgctgccttggcattgttctttcggacgagaagtttctatagtcagcctgattgtgaggattttgtgtcgaaatcagaagatgagcaaagtgataatgttgacttcaccttcaagccagactgtgaagttgtcaaaccaaaacatgaagttgaatcaatggtcgataccagttgccaacaatccattcacaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

556

Amino Acids

61.35

Weight (kDa)

6.15

Isoelectric Point (pI)

27.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 429
AccB1I GGYRCC 2 cut(s) 80, 434
AccI GTMKAC 2 cut(s) 44, 102
AciI CCGC 7 cut(s) 78, 300, 362, 398, 595, 662, 871
AclWI GGATC 2 cut(s) 1219, 1345
AcoI YGGCCR 1 cut(s) 1165
AcsI RAATTY 1 cut(s) 1057
AfaI GTAC 3 cut(s) 512, 741, 1030
AfiI CCNNNNNNNGG 5 cut(s) 189, 328, 1447, 1467, 1468
AflIII ACRYGT 1 cut(s) 721
AgsI TTSAA 6 cut(s) 169, 385, 491, 1309, 1588, 1628
AjnI CCWGG 1 cut(s) 1192
AjuI GAANNNNNNNTTGG 3 cut(s) 1252, 1284, 1644
AluBI AGCT 4 cut(s) 8, 827, 1079, 1454
AluI AGCT 4 cut(s) 8, 827, 1079, 1454
Alw21I GWGCWC 4 cut(s) 74, 787, 911, 1201
Alw26I GTCTC 2 cut(s) 229, 641
Alw44I GTGCAC 2 cut(s) 70, 907
AlwI GGATC 2 cut(s) 1219, 1345
AlwNI CAGNNNCTG 1 cut(s) 628
Ama87I CYCGRG 1 cut(s) 958
AoxI GGCC 4 cut(s) 297, 323, 1124, 1165
ApaLI GTGCAC 2 cut(s) 70, 907
ApeKI GCWGC 6 cut(s) 550, 622, 751, 1451, 1454, 1478
ApoI RAATTY 1 cut(s) 1057
AspS9I GGNCC 4 cut(s) 30, 236, 297, 1299
AsuC2I CCSGG 1 cut(s) 322
AsuHPI GGTGA 3 cut(s) 349, 1186, 1573
AsuNHI GCTAGC 2 cut(s) 358, 541
AvaI CYCGRG 1 cut(s) 958
AvaII GGWCC 3 cut(s) 30, 236, 1299
BaeGI GKGCMC 2 cut(s) 74, 911
BalI TGGCCA 1 cut(s) 1167
BanI GGYRCC 2 cut(s) 80, 434
BanII GRGCYC 2 cut(s) 959, 1474
BauI CACGAG 1 cut(s) 226
Bbv12I GWGCWC 4 cut(s) 74, 787, 911, 1201
BbvCI CCTCAGC 1 cut(s) 828
BbvI GCAGC 6 cut(s) 537, 634, 738, 1441, 1463, 1465
BccI CCATC 4 cut(s) 842, 1110, 1176, 1310
BceAI ACGGC 1 cut(s) 287
BciT130I CCWGG 1 cut(s) 1194
BciVI GTATCC 1 cut(s) 57
BcnI CCSGG 1 cut(s) 322
BcoDI GTCTC 2 cut(s) 229, 641
BfaI CTAG 4 cut(s) 9, 359, 542, 1148
BfmI CTRYAG 1 cut(s) 1513
BfuI GTATCC 1 cut(s) 57
BglII AGATCT 1 cut(s) 501
BlpI GCTNAGC 1 cut(s) 1046
BmcAI AGTACT 1 cut(s) 1030
Bme1390I CCNGG 2 cut(s) 322, 1194
Bme18I GGWCC 3 cut(s) 30, 236, 1299
BmeT110I CYCGRG 1 cut(s) 958
BmgT120I GGNCC 4 cut(s) 30, 236, 297, 1299
BmiI GGNNCC 4 cut(s) 82, 181, 436, 1300
BmrFI CCNGG 2 cut(s) 322, 1194
BmsI GCATC 5 cut(s) 456, 528, 634, 1114, 1160
BmtI GCTAGC 2 cut(s) 362, 545
BpmI CTGGAG 1 cut(s) 279
Bpu10I CCTNAGC 1 cut(s) 828
Bpu1102I GCTNAGC 1 cut(s) 1046
BpuEI CTTGAG 1 cut(s) 101
BpuMI CCSGG 1 cut(s) 322
BsaAI YACGTR 1 cut(s) 722
BsaBI GATNNNNATC 1 cut(s) 1087
BsaJI CCNNGG 5 cut(s) 239, 303, 320, 939, 1482
BsaWI WCCGGW 1 cut(s) 328
BsaXI ACNNNNNCTCC 4 cut(s) 80, 110, 468, 498
Bsc4I CCNNNNNNNGG 5 cut(s) 189, 328, 1447, 1467, 1468
Bse1I ACTGG 6 cut(s) 258, 268, 409, 1213, 1326, 1644
Bse3DI GCAATG 2 cut(s) 909, 1320
Bse8I GATNNNNATC 1 cut(s) 1087
BseBI CCWGG 1 cut(s) 1194
BseDI CCNNGG 5 cut(s) 239, 303, 320, 939, 1482
BseGI GGATG 3 cut(s) 930, 1121, 1151
BseJI GATNNNNATC 1 cut(s) 1087
BseLI CCNNNNNNNGG 5 cut(s) 189, 328, 1447, 1467, 1468
BseMI GCAATG 2 cut(s) 909, 1320
BseMII CTCAG 6 cut(s) 122, 386, 461, 819, 1037, 1263
BseNI ACTGG 6 cut(s) 258, 268, 409, 1213, 1326, 1644
BseSI GKGCMC 2 cut(s) 74, 911
BseXI GCAGC 6 cut(s) 537, 634, 738, 1441, 1463, 1465
BshFI GGCC 4 cut(s) 299, 325, 1126, 1167
BshNI GGYRCC 2 cut(s) 80, 434
BsiHKAI GWGCWC 4 cut(s) 74, 787, 911, 1201
BsiHKCI CYCGRG 1 cut(s) 958
BsiSI CCGG 2 cut(s) 322, 329
BslFI GGGAC 2 cut(s) 975, 1312
BslI CCNNNNNNNGG 5 cut(s) 189, 328, 1447, 1467, 1468
BsmAI GTCTC 2 cut(s) 229, 641
BsmFI GGGAC 2 cut(s) 975, 1312
BsnI GGCC 4 cut(s) 299, 325, 1126, 1167
BsoBI CYCGRG 1 cut(s) 958
Bsp1286I GDGCHC 6 cut(s) 74, 787, 911, 959, 1201, 1474
Bsp1407I TGTACA 1 cut(s) 510
Bsp143I GATC 4 cut(s) 136, 501, 1211, 1337
Bsp1720I GCTNAGC 1 cut(s) 1046
Bsp19I CCATGG 1 cut(s) 939
BspACI CCGC 7 cut(s) 78, 300, 362, 398, 595, 662, 871
BspANI GGCC 4 cut(s) 299, 325, 1126, 1167
BspCNI CTCAG 6 cut(s) 121, 385, 462, 820, 1038, 1264
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 4 cut(s) 82, 181, 436, 1300
BspOI GCTAGC 2 cut(s) 362, 545
BspPI GGATC 2 cut(s) 1219, 1345
BspT107I GGYRCC 2 cut(s) 80, 434
BsrDI GCAATG 2 cut(s) 909, 1320
BsrGI TGTACA 1 cut(s) 510
BsrI ACTGG 6 cut(s) 258, 268, 409, 1213, 1326, 1644
BssECI CCNNGG 5 cut(s) 239, 303, 320, 939, 1482
BssMI GATC 4 cut(s) 136, 501, 1211, 1337
BssSI CACGAG 1 cut(s) 226
BssT1I CCWWGG 3 cut(s) 239, 939, 1482
Bst2BI CACGAG 1 cut(s) 226
Bst2UI CCWGG 1 cut(s) 1194
Bst4CI ACNGT 8 cut(s) 30, 49, 69, 157, 188, 839, 1238, 1598
BstAUI TGTACA 1 cut(s) 510
BstBAI YACGTR 1 cut(s) 722
BstC8I GCNNGC 4 cut(s) 55, 360, 543, 756
BstDEI CTNAG 8 cut(s) 108, 372, 470, 823, 828, 983, 1046, 1272
BstDSI CCRYGG 2 cut(s) 303, 939
BstF5I GGATG 3 cut(s) 930, 1121, 1151
BstKTI GATC 4 cut(s) 139, 504, 1214, 1340
BstMAI GTCTC 2 cut(s) 229, 641
BstMBI GATC 4 cut(s) 136, 501, 1211, 1337
BstMWI GCNNNNNNNGC 7 cut(s) 78, 279, 368, 547, 760, 1478, 1484
BstNI CCWGG 1 cut(s) 1194
BstNSI RCATGY 2 cut(s) 371, 1410
BstSCI CCNGG 2 cut(s) 320, 1192
BstSFI CTRYAG 1 cut(s) 1513
BstSLI GKGCMC 2 cut(s) 74, 911
BstV1I GCAGC 6 cut(s) 537, 634, 738, 1441, 1463, 1465
BstX2I RGATCY 3 cut(s) 501, 1211, 1337
BstYI RGATCY 3 cut(s) 501, 1211, 1337
BsuI GTATCC 1 cut(s) 57
BsuRI GGCC 4 cut(s) 299, 325, 1126, 1167
BtgI CCRYGG 2 cut(s) 303, 939
BtsCI GGATG 3 cut(s) 930, 1121, 1151
BtsI GCAGTG 2 cut(s) 545, 975
BtsIMutI CAGTG 6 cut(s) 74, 153, 275, 402, 545, 975
Cac8I GCNNGC 4 cut(s) 55, 360, 543, 756
CaiI CAGNNNCTG 1 cut(s) 628
CciI TCATGA 1 cut(s) 450
Cfr13I GGNCC 4 cut(s) 30, 236, 297, 1299
Csp6I GTAC 3 cut(s) 511, 740, 1029
CviAII CATG 8 cut(s) 352, 368, 451, 940, 1135, 1156, 1407, 1619
CviQI GTAC 3 cut(s) 511, 740, 1029
DdeI CTNAG 8 cut(s) 108, 372, 470, 823, 828, 983, 1046, 1272
DpnI GATC 4 cut(s) 138, 503, 1213, 1339
DpnII GATC 4 cut(s) 136, 501, 1211, 1337
EaeI YGGCCR 1 cut(s) 1165
Eco130I CCWWGG 3 cut(s) 239, 939, 1482
Eco24I GRGCYC 2 cut(s) 959, 1474
Eco47I GGWCC 3 cut(s) 30, 236, 1299
Eco88I CYCGRG 1 cut(s) 958
EcoRII CCWGG 1 cut(s) 1192
EcoT14I CCWWGG 3 cut(s) 239, 939, 1482
EcoT38I GRGCYC 2 cut(s) 959, 1474
ErhI CCWWGG 3 cut(s) 239, 939, 1482
FaeI CATG 8 cut(s) 355, 371, 454, 943, 1138, 1159, 1410, 1622
FaqI GGGAC 2 cut(s) 975, 1312
FatI CATG 8 cut(s) 351, 367, 450, 939, 1134, 1155, 1406, 1618
FauNDI CATATG 3 cut(s) 59, 1052, 1293
FblI GTMKAC 2 cut(s) 44, 102
FokI GGATG 3 cut(s) 937, 1128, 1138
FriOI GRGCYC 2 cut(s) 959, 1474
FspBI CTAG 4 cut(s) 9, 359, 542, 1148
GsuI CTGGAG 1 cut(s) 279
HaeIII GGCC 4 cut(s) 299, 325, 1126, 1167
HapII CCGG 2 cut(s) 322, 329
Hin1II CATG 8 cut(s) 355, 371, 454, 943, 1138, 1159, 1410, 1622
HincII GTYRAC 3 cut(s) 144, 835, 1576
HindII GTYRAC 3 cut(s) 144, 835, 1576
HinfI GANTC 5 cut(s) 19, 193, 591, 889, 1628
HpaII CCGG 2 cut(s) 322, 329
HphI GGTGA 3 cut(s) 349, 1186, 1573
Hpy166II GTNNAC 7 cut(s) 45, 72, 103, 144, 835, 909, 1576
Hpy188III TCNNGA 7 cut(s) 118, 149, 451, 629, 640, 922, 960
Hpy8I GTNNAC 7 cut(s) 45, 72, 103, 144, 835, 909, 1576
HpyAV CCTTC 5 cut(s) 103, 448, 598, 602, 1594
HpyCH4III ACNGT 8 cut(s) 30, 49, 69, 157, 188, 839, 1238, 1598
HpyCH4IV ACGT 1 cut(s) 721
HpyCH4V TGCA 5 cut(s) 72, 678, 909, 968, 1105
HpyF10VI GCNNNNNNNGC 7 cut(s) 78, 279, 368, 547, 760, 1478, 1484
HpyF3I CTNAG 8 cut(s) 108, 372, 470, 823, 828, 983, 1046, 1272
HpySE526I ACGT 1 cut(s) 721
Hsp92II CATG 8 cut(s) 355, 371, 454, 943, 1138, 1159, 1410, 1622
Kzo9I GATC 4 cut(s) 136, 501, 1211, 1337
LmnI GCTCC 4 cut(s) 179, 260, 476, 1076
Lsp1109I GCAGC 6 cut(s) 537, 634, 738, 1441, 1463, 1465
LweI GCATC 5 cut(s) 456, 528, 634, 1114, 1160
MaeI CTAG 4 cut(s) 9, 359, 542, 1148
MaeII ACGT 1 cut(s) 721
MaeIII GTNAC 5 cut(s) 400, 413, 1007, 1232, 1248
MalI GATC 4 cut(s) 138, 503, 1213, 1339
MboI GATC 4 cut(s) 136, 501, 1211, 1337
MboII GAAGA 5 cut(s) 373, 524, 857, 1297, 1565
MflI RGATCY 3 cut(s) 501, 1211, 1337
MhlI GDGCHC 6 cut(s) 74, 787, 911, 959, 1201, 1474
MlsI TGGCCA 1 cut(s) 1167
MluCI AATT 2 cut(s) 645, 1057
MluNI TGGCCA 1 cut(s) 1167
MmeI TCCRAC 3 cut(s) 289, 780, 1315
MnlI CCTC 8 cut(s) 125, 336, 564, 769, 774, 823, 1378, 1525
Mox20I TGGCCA 1 cut(s) 1167
MscI TGGCCA 1 cut(s) 1167
MseI TTAA 1 cut(s) 975
Msp20I TGGCCA 1 cut(s) 1167
MspA1I CMGCKG 2 cut(s) 78, 1454
MspI CCGG 2 cut(s) 322, 329
MspR9I CCNGG 2 cut(s) 322, 1194
MvaI CCWGG 1 cut(s) 1194
MwoI GCNNNNNNNGC 7 cut(s) 78, 279, 368, 547, 760, 1478, 1484
NciI CCSGG 1 cut(s) 322
NcoI CCATGG 1 cut(s) 939
NdeI CATATG 3 cut(s) 59, 1052, 1293
NdeII GATC 4 cut(s) 136, 501, 1211, 1337
NheI GCTAGC 2 cut(s) 358, 541
NlaIII CATG 8 cut(s) 355, 371, 454, 943, 1138, 1159, 1410, 1622
NlaIV GGNNCC 4 cut(s) 82, 181, 436, 1300
NmuCI GTSAC 2 cut(s) 400, 1248
NspI RCATGY 2 cut(s) 371, 1410
PagI TCATGA 1 cut(s) 450
PfeI GAWTC 5 cut(s) 19, 193, 591, 889, 1628
PflFI GACNNNGTC 1 cut(s) 28
Ppu21I YACGTR 1 cut(s) 722
PsiI TTATAA 1 cut(s) 429
Psp6I CCWGG 1 cut(s) 1192
PspGI CCWGG 1 cut(s) 1192
PspN4I GGNNCC 4 cut(s) 82, 181, 436, 1300
PspPI GGNCC 4 cut(s) 30, 236, 297, 1299
PstNI CAGNNNCTG 1 cut(s) 628
PsuI RGATCY 3 cut(s) 501, 1211, 1337
PsyI GACNNNGTC 1 cut(s) 28
PvuII CAGCTG 1 cut(s) 1454
RsaI GTAC 3 cut(s) 512, 741, 1030
RsaNI GTAC 3 cut(s) 511, 740, 1029
SaqAI TTAA 1 cut(s) 975
Sau3AI GATC 4 cut(s) 136, 501, 1211, 1337
Sau96I GGNCC 4 cut(s) 30, 236, 297, 1299
ScaI AGTACT 1 cut(s) 1030
ScrFI CCNGG 2 cut(s) 322, 1194
SduI GDGCHC 6 cut(s) 74, 787, 911, 959, 1201, 1474
SfaNI GCATC 5 cut(s) 456, 528, 634, 1114, 1160
SfcI CTRYAG 1 cut(s) 1513
SinI GGWCC 3 cut(s) 30, 236, 1299
SmlI CTYRAG 1 cut(s) 116
SmoI CTYRAG 1 cut(s) 116
Sse9I AATT 2 cut(s) 645, 1057
SsiI CCGC 7 cut(s) 78, 300, 362, 398, 595, 662, 871
SspMI CTAG 4 cut(s) 9, 359, 542, 1148
StyD4I CCNGG 2 cut(s) 320, 1192
StyI CCWWGG 3 cut(s) 239, 939, 1482
TaaI ACNGT 8 cut(s) 30, 49, 69, 157, 188, 839, 1238, 1598
TaiI ACGT 1 cut(s) 724
TaqI TCGA 4 cut(s) 150, 641, 1544, 1638
TasI AATT 2 cut(s) 645, 1057
TatI WGTACW 3 cut(s) 510, 739, 1028
TauI GCSGC 4 cut(s) 81, 302, 365, 665
TfiI GAWTC 5 cut(s) 19, 193, 591, 889, 1628
Tru1I TTAA 1 cut(s) 975
Tru9I TTAA 1 cut(s) 975
TscAI CASTG 6 cut(s) 74, 160, 275, 409, 552, 975
TseFI GTSAC 2 cut(s) 400, 1248
TseI GCWGC 6 cut(s) 550, 622, 751, 1451, 1454, 1478
Tsp45I GTSAC 2 cut(s) 400, 1248
TspDTI ATGAA 5 cut(s) 340, 467, 516, 1123, 1635
TspGWI ACGGA 1 cut(s) 88
TspRI CASTG 6 cut(s) 74, 160, 275, 409, 552, 975
Tth111I GACNNNGTC 1 cut(s) 28
VneI GTGCAC 2 cut(s) 70, 907
VpaK11BI GGWCC 3 cut(s) 30, 236, 1299
XapI RAATTY 1 cut(s) 1057
XceI RCATGY 2 cut(s) 371, 1410
XmiI GTMKAC 2 cut(s) 44, 102
XspI CTAG 4 cut(s) 9, 359, 542, 1148
ZrmI AGTACT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.