Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003546.1

Orthogroup ID

OG0003806

Physical Location & Seq

Genomic Coordinates Forward (+)

152654 .. 157513

Gene Structure 4860 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003546.1_g000038.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

atgggggaggaagacataaagaggaaactgctgataaagggggaagatgaacgtgaacacgatttgggtttgcaatacagagtgtggaatgaaagcaagaagatctgggtgatagctggacctgctatattcaccagattctctacttttggaacaaatgtggtcagtcaagccttcattggtcacattggctctactgagttagctgcatattcactcgtctttactgtactggtcagagagagaagtcatcctccaccttgctgtgctccggtgactagtggccggccgcggtctccggcaaccgatgattggaattcggcgaccattgaccggaatccggctaccggactgcaaaccttgggcgctgacgtggtcggcgaggtcgcaggtggaggagacgttgaagaggacgaggtcggcgttggacttgacgatgtcgaggacctaggaggatttctggagattggagaggtcgcggatcttggagctgacgtggtcggcgaggtcgcaggtggaggagacgttggagaggacgtgatcggcgtcggacttgacgatctcgaggacctgggaggatttctggagattagagaggtgcttgtcgaggtcggagcgctgggagagaggaggtggtcgaggttgagatccagggtgagccgtggactgcggcggaggaggagagtcgtcgctgactgggacggtgaggaggaccagcgccggtggcgactgggaatggctagtgcgctggaaactctttgtggtcaatcatatggtgcaaaacaatatgacatgcttggggtacatcttcagagatcatggatagtgttgtttgtcagcgcattcttccttgttcctatttgcatctttacaactccaatcttagaggccttaggacaggaacagaatattgcacaagtggcgggctatatttctctctgggtaatcccggtgattttcgcctttgttttatcctttacctgccaaatgtacttgcaagcacagagcaaaaatatgatcatagcttacttgtcagcaatttcaattgcaatccacatcctcctttcatggcttttgactgtgaaatatcagcttgggattcctggcgcaatggtgtccacaattttagcattttggattcccaacattggtcaacttttatttgttatatgtggaggatgcccacggacatggaaaggcttctcgatgttagcttttaaagatctctgggatgtcgtcaagctttctctgtcttctggtgttatgctttgtctggagctttggtacaatacggtcttggttcttttaactggaagtatggaaaatgctgaggtttctatcgatgctctagctatctgtctcaacatcaatgggtgggaaatgatgatatcccttggcttcttggctgcagcaagtgtacgagtgtcaaatgagcttggacgaggtagctcaaaaggggcgaagttctcaattgtggttatagtgttcacatcatttgccatcggtgttgtgttgttcttcattttcctattcttgagggaacgtctatcctacatctttaccaacgacgaagaggtagccaaagcagttgccgacttgtcaccattattggccttctccatattgttgaacagtgttcagcctgtgctctccggagttgctctgggtgctggatggcagagtactgtagcatatgtgaacatagcatgttattaccttataggcattcccgttggagttgtgcttggttatgttgtcaacctacaagtcaaaggtgtttggattggaatgttgttcggaacatttgtgcaaacgattgtactactaatactcacctacagaactgattgggataatcaggtaacaatagctcgtaatcgtgttaacaagtgggccgttaaagatattggagacccaagctccgactcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

643

Amino Acids

70.33

Weight (kDa)

4.9

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33080 AT1G33080 AT1G33090 AT1G33100 AT1G33110 AT1G33110
malus_domestica	MD12G1014300.v1.1 MD12G1014700.v1.1 MD14G1012300.v1.1
prunus_persica	Prupe.7G026300_v2.0.a1 Prupe.7G026400_v2.0.a1 Prupe.7G026400_v2.0.a1 Prupe.7G026400_v2.0.a1 Prupe.7G026400_v2.0.a1 Prupe.7G026400_v2.0.a1 Prupe.7G026400_v2.0.a1 Prupe.7G026400_v2.0.a1
pyrus_communis	pycom12g01200
rosa_chinensis	RchiOBHm_Chr3g0495631
rosa_laevigata	RLG00000022605
rosa_multiflora	Rmu_sc0000559.1_g000033 Rmu_sc0003546.1_g000038
rosa_roxburghii	Rroxscaffold_5G00347190 Rroxscaffold_6G00390240 Rroxscaffold_6G00390260
rosa_rugosa	Rorug03G0274600 Rorug03G0274700 Rorug03G0274800 Rorug03G0274900
rosa_samantha	Rh3AG322300 Rh3BG357400 Rh3CG354200 Rh3DG357400
rosa_wichuraiana	Rw3G028170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	380, 503
Acc36I	ACCTGC	4 cut(s)	130, 380, 503, 989
AccII	CGCG	2 cut(s)	292, 479
AccIII	TCCGGA	1 cut(s)	1652
AciI	CCGC	6 cut(s)	290, 292, 479, 670, 673, 923
AclWI	GGATC	2 cut(s)	489, 642
AcoI	YGGCCR	2 cut(s)	283, 287
AcsI	RAATTY	1 cut(s)	316
AcuI	CTGAAG	1 cut(s)	794
AcyI	GRCGYC	1 cut(s)	546
AfaI	GTAC	7 cut(s)	231, 804, 992, 1286, 1419, 1684, 1821
AfeI	AGCGCT	1 cut(s)	618
AfiI	CCNNNNNNNGG	5 cut(s)	312, 333, 340, 347, 1148
AgsI	TTSAA	3 cut(s)	407, 1044, 1630
AhlI	ACTAGT	1 cut(s)	278
AjiI	CACGTC	3 cut(s)	373, 496, 538
AjnI	CCWGG	3 cut(s)	570, 650, 1102
Alw21I	GWGCWC	2 cut(s)	271, 1650
Alw26I	GTCTC	5 cut(s)	300, 393, 516, 1364, 1905
AlwI	GGATC	2 cut(s)	489, 642
Ama87I	CYCGRG	1 cut(s)	563
Aor13HI	TCCGGA	1 cut(s)	1652
Aor51HI	AGCGCT	1 cut(s)	618
AoxI	GGCC	5 cut(s)	283, 287, 888, 1611, 1893
ApeKI	GCWGC	3 cut(s)	206, 1406, 1409
ApoI	RAATTY	1 cut(s)	316
Asp700I	GAANNNNTTC	1 cut(s)	1199
AspA2I	CCTAGG	1 cut(s)	448
AspLEI	GCGC	6 cut(s)	368, 619, 720, 748, 842, 1109
AspS9I	GGNCC	5 cut(s)	119, 445, 568, 712, 1893
AsuC2I	CCSGG	1 cut(s)	950
AsuHPI	GGTGA	8 cut(s)	121, 124, 286, 667, 716, 964, 1593, 1825
AvaI	CYCGRG	1 cut(s)	563
AvaII	GGWCC	4 cut(s)	119, 445, 568, 712
AvrII	CCTAGG	1 cut(s)	448
AxyI	CCTNAGG	1 cut(s)	892
BbsI	GAAGAC	2 cut(s)	18, 1245
Bbv12I	GWGCWC	2 cut(s)	271, 1650
BbvCI	CCTCAGC	1 cut(s)	1329
BbvI	GCAGC	3 cut(s)	193, 1393, 1421
BccI	CCATC	2 cut(s)	1508, 1668
BceAI	ACGGC	2 cut(s)	645, 1880
BciT130I	CCWGG	3 cut(s)	572, 652, 1104
BclI	TGATCA	1 cut(s)	1017
BcnI	CCSGG	1 cut(s)	950
BcoDI	GTCTC	5 cut(s)	300, 393, 516, 1364, 1905
BcuI	ACTAGT	1 cut(s)	278
BfaI	CTAG	4 cut(s)	279, 449, 741, 1349
BfmI	CTRYAG	3 cut(s)	1407, 1686, 1837
BfoI	RGCGCY	3 cut(s)	369, 620, 721
BfuAI	ACCTGC	4 cut(s)	130, 380, 503, 989
BglII	AGATCT	2 cut(s)	102, 1222
BisI	GCNGC	5 cut(s)	207, 290, 671, 1407, 1410
BlnI	CCTAGG	1 cut(s)	448
BlsI	GCNGC	5 cut(s)	208, 291, 672, 1408, 1411
BmcAI	AGTACT	1 cut(s)	1684
Bme1390I	CCNGG	4 cut(s)	572, 652, 950, 1104
Bme18I	GGWCC	4 cut(s)	119, 445, 568, 712
BmeT110I	CYCGRG	1 cut(s)	563
BmgBI	CACGTC	3 cut(s)	373, 496, 538
BmgT120I	GGNCC	5 cut(s)	119, 445, 568, 712, 1893
BmrFI	CCNGG	4 cut(s)	572, 652, 950, 1104
BmrI	ACTGGG	2 cut(s)	706, 740
BmsI	GCATC	3 cut(s)	873, 1169, 1333
BmuI	ACTGGG	2 cut(s)	706, 740
BpiI	GAAGAC	2 cut(s)	18, 1245
BpmI	CTGGAG	3 cut(s)	482, 605, 1295
Bpu10I	CCTNAGC	1 cut(s)	1329
BpuEI	CTTGAG	1 cut(s)	1555
BpuMI	CCSGG	1 cut(s)	950
Bsa29I	ATCGAT	1 cut(s)	1341
BsaHI	GRCGYC	1 cut(s)	546
BsaI	GGTCTC	2 cut(s)	300, 1905
BsaJI	CCNNGG	8 cut(s)	290, 360, 448, 571, 651, 661, 1184, 1393
BsaWI	WCCGGW	4 cut(s)	271, 333, 347, 1652
Bsc4I	CCNNNNNNNGG	5 cut(s)	312, 333, 340, 347, 1148
Bse118I	RCCGGY	2 cut(s)	285, 720
Bse1I	ACTGG	4 cut(s)	237, 701, 735, 1315
Bse21I	CCTNAGG	1 cut(s)	892
Bse3DI	GCAATG	1 cut(s)	1116
BseAI	TCCGGA	1 cut(s)	1652
BseBI	CCWGG	3 cut(s)	572, 652, 1104
BseCI	ATCGAT	1 cut(s)	1341
BseDI	CCNNGG	8 cut(s)	290, 360, 448, 571, 651, 661, 1184, 1393
BseGI	GGATG	5 cut(s)	250, 1056, 1184, 1237, 1679
BseLI	CCNNNNNNNGG	5 cut(s)	312, 333, 340, 347, 1148
BseMI	GCAATG	1 cut(s)	1116
BseMII	CTCAG	2 cut(s)	189, 1320
BseNI	ACTGG	4 cut(s)	237, 701, 735, 1315
BseRI	GAGGAG	6 cut(s)	411, 534, 643, 691, 694, 722
BseX3I	CGGCCG	1 cut(s)	287
BseXI	GCAGC	3 cut(s)	193, 1393, 1421
BseYI	CCCAGC	1 cut(s)	619
Bsh1236I	CGCG	2 cut(s)	292, 479
Bsh1285I	CGRYCG	1 cut(s)	290
BshFI	GGCC	5 cut(s)	285, 289, 890, 1613, 1895
BshVI	ATCGAT	1 cut(s)	1341
BsiEI	CGRYCG	1 cut(s)	290
BsiHKAI	GWGCWC	2 cut(s)	271, 1650
BsiHKCI	CYCGRG	1 cut(s)	563
BsiSI	CCGG	9 cut(s)	272, 286, 299, 334, 341, 348, 721, 950, 1653
BslFI	GGGAC	1 cut(s)	713
BslI	CCNNNNNNNGG	5 cut(s)	312, 333, 340, 347, 1148
BsmAI	GTCTC	5 cut(s)	300, 393, 516, 1364, 1905
BsmBI	CGTCTC	2 cut(s)	393, 516
BsmFI	GGGAC	1 cut(s)	713
BsmI	GAATGC	2 cut(s)	842, 1725
BsnI	GGCC	5 cut(s)	285, 289, 890, 1613, 1895
Bso31I	GGTCTC	2 cut(s)	300, 1905
BsoBI	CYCGRG	1 cut(s)	563
Bsp1286I	GDGCHC	2 cut(s)	271, 1650
Bsp13I	TCCGGA	1 cut(s)	1652
Bsp143I	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
BspACI	CCGC	6 cut(s)	290, 292, 479, 670, 673, 923
BspANI	GGCC	5 cut(s)	285, 289, 890, 1613, 1895
BspCNI	CTCAG	2 cut(s)	190, 1321
BspDI	ATCGAT	1 cut(s)	1341
BspEI	TCCGGA	1 cut(s)	1652
BspFNI	CGCG	2 cut(s)	292, 479
BspMAI	CTGCAG	1 cut(s)	1411
BspMI	ACCTGC	4 cut(s)	130, 380, 503, 989
BspPI	GGATC	2 cut(s)	489, 642
BspTNI	GGTCTC	2 cut(s)	300, 1905
BsrDI	GCAATG	1 cut(s)	1116
BsrFI	RCCGGY	2 cut(s)	285, 720
BsrI	ACTGG	4 cut(s)	237, 701, 735, 1315
BssAI	RCCGGY	2 cut(s)	285, 720
BssECI	CCNNGG	8 cut(s)	290, 360, 448, 571, 651, 661, 1184, 1393
BssMI	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
BssNI	GRCGYC	1 cut(s)	546
BssT1I	CCWWGG	3 cut(s)	360, 448, 1393
Bst2UI	CCWGG	3 cut(s)	572, 652, 1104
Bst4CI	ACNGT	6 cut(s)	229, 704, 1081, 1294, 1634, 1687
Bst6I	CTCTTC	2 cut(s)	402, 1566
BstACI	GRCGYC	1 cut(s)	546
BstC8I	GCNNGC	3 cut(s)	287, 925, 999
BstDEI	CTNAG	4 cut(s)	198, 883, 892, 1329
BstDSI	CCRYGG	3 cut(s)	290, 661, 1184
BstF5I	GGATG	5 cut(s)	250, 1056, 1184, 1237, 1679
BstFNI	CGCG	2 cut(s)	292, 479
BstH2I	RGCGCY	3 cut(s)	369, 620, 721
BstHHI	GCGC	6 cut(s)	368, 619, 720, 748, 842, 1109
BstKTI	GATC	8 cut(s)	105, 484, 543, 562, 650, 818, 1020, 1225
BstMAI	GTCTC	5 cut(s)	300, 393, 516, 1364, 1905
BstMBI	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
BstMCI	CGRYCG	1 cut(s)	290
BstMWI	GCNNNNNNNGC	4 cut(s)	122, 724, 920, 1667
BstNI	CCWGG	3 cut(s)	572, 652, 1104
BstNSI	RCATGY	2 cut(s)	796, 1710
BstSCI	CCNGG	4 cut(s)	570, 650, 948, 1102
BstSFI	CTRYAG	3 cut(s)	1407, 1686, 1837
BstUI	CGCG	2 cut(s)	292, 479
BstV1I	GCAGC	3 cut(s)	193, 1393, 1421
BstV2I	GAAGAC	2 cut(s)	18, 1245
BstX2I	RGATCY	4 cut(s)	102, 481, 647, 1222
BstXI	CCANNNNNNTGG	1 cut(s)	1191
BstYI	RGATCY	4 cut(s)	102, 481, 647, 1222
BstZI	CGGCCG	1 cut(s)	287
Bsu15I	ATCGAT	1 cut(s)	1341
Bsu36I	CCTNAGG	1 cut(s)	892
BsuRI	GGCC	5 cut(s)	285, 289, 890, 1613, 1895
BsuTUI	ATCGAT	1 cut(s)	1341
BtgI	CCRYGG	3 cut(s)	290, 661, 1184
BtrI	CACGTC	3 cut(s)	373, 496, 538
BtsCI	GGATG	5 cut(s)	250, 1056, 1184, 1237, 1679
BtsIMutI	CAGTG	1 cut(s)	1639
BveI	ACCTGC	4 cut(s)	130, 380, 503, 989
Cac8I	GCNNGC	3 cut(s)	287, 925, 999
CfoI	GCGC	6 cut(s)	368, 619, 720, 748, 842, 1109
Cfr10I	RCCGGY	2 cut(s)	285, 720
Cfr13I	GGNCC	5 cut(s)	119, 445, 568, 712, 1893
Cfr42I	CCGCGG	1 cut(s)	293
ClaI	ATCGAT	1 cut(s)	1341
CseI	GACGC	1 cut(s)	535
Csp6I	GTAC	7 cut(s)	230, 803, 991, 1285, 1418, 1683, 1820
CviAII	CATG	5 cut(s)	793, 819, 1068, 1191, 1707
CviQI	GTAC	7 cut(s)	230, 803, 991, 1285, 1418, 1683, 1820
DdeI	CTNAG	4 cut(s)	198, 883, 892, 1329
DpnI	GATC	8 cut(s)	104, 483, 542, 561, 649, 817, 1019, 1224
DpnII	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
DraI	TTTAAA	1 cut(s)	1219
EaeI	YGGCCR	2 cut(s)	283, 287
EagI	CGGCCG	1 cut(s)	287
Eam1104I	CTCTTC	2 cut(s)	402, 1566
EarI	CTCTTC	2 cut(s)	402, 1566
EciI	GGCGGA	1 cut(s)	688
EclXI	CGGCCG	1 cut(s)	287
Eco130I	CCWWGG	3 cut(s)	360, 448, 1393
Eco147I	AGGCCT	1 cut(s)	890
Eco31I	GGTCTC	2 cut(s)	300, 1905
Eco32I	GATATC	1 cut(s)	1389
Eco47I	GGWCC	4 cut(s)	119, 445, 568, 712
Eco47III	AGCGCT	1 cut(s)	618
Eco52I	CGGCCG	1 cut(s)	287
Eco57I	CTGAAG	1 cut(s)	794
Eco81I	CCTNAGG	1 cut(s)	892
Eco88I	CYCGRG	1 cut(s)	563
EcoO109I	RGGNCCY	2 cut(s)	445, 568
EcoRI	GAATTC	1 cut(s)	316
EcoRII	CCWGG	3 cut(s)	570, 650, 1102
EcoRV	GATATC	1 cut(s)	1389
EcoT14I	CCWWGG	3 cut(s)	360, 448, 1393
ErhI	CCWWGG	3 cut(s)	360, 448, 1393
Esp3I	CGTCTC	2 cut(s)	393, 516
FaeI	CATG	5 cut(s)	796, 822, 1071, 1194, 1710
FaqI	GGGAC	1 cut(s)	713
FatI	CATG	5 cut(s)	792, 818, 1067, 1190, 1706
FauI	CCCGC	1 cut(s)	916
FauNDI	CATATG	2 cut(s)	772, 1693
FbaI	TGATCA	1 cut(s)	1017
Fnu4HI	GCNGC	5 cut(s)	207, 290, 671, 1407, 1410
FokI	GGATG	5 cut(s)	237, 1043, 1191, 1244, 1686
FseI	GGCCGGCC	1 cut(s)	289
Fsp4HI	GCNGC	5 cut(s)	207, 290, 671, 1407, 1410
FspBI	CTAG	4 cut(s)	279, 449, 741, 1349
GlaI	GCGC	6 cut(s)	367, 618, 719, 747, 841, 1108
GluI	GCNGC	5 cut(s)	207, 290, 671, 1407, 1410
GsaI	CCCAGC	1 cut(s)	623
GsuI	CTGGAG	3 cut(s)	482, 605, 1295
HaeII	RGCGCY	3 cut(s)	369, 620, 721
HaeIII	GGCC	5 cut(s)	285, 289, 890, 1613, 1895
HapII	CCGG	9 cut(s)	272, 286, 299, 334, 341, 348, 721, 950, 1653
HgaI	GACGC	1 cut(s)	535
HhaI	GCGC	6 cut(s)	368, 619, 720, 748, 842, 1109
Hin1I	GRCGYC	1 cut(s)	546
Hin1II	CATG	5 cut(s)	796, 822, 1071, 1194, 1710
Hin6I	GCGC	6 cut(s)	366, 617, 718, 746, 840, 1107
HinP1I	GCGC	6 cut(s)	366, 617, 718, 746, 840, 1107
HincII	GTYRAC	3 cut(s)	1154, 1759, 1885
HindII	GTYRAC	3 cut(s)	1154, 1759, 1885
HindIII	AAGCTT	1 cut(s)	1241
HinfI	GANTC	6 cut(s)	138, 337, 684, 1099, 1138, 1925
HpaI	GTTAAC	1 cut(s)	1885
HpaII	CCGG	9 cut(s)	272, 286, 299, 334, 341, 348, 721, 950, 1653
HphI	GGTGA	8 cut(s)	121, 124, 286, 667, 716, 964, 1593, 1825
Hpy166II	GTNNAC	9 cut(s)	56, 665, 1119, 1154, 1418, 1488, 1699, 1759, 1885
Hpy188I	TCNGA	6 cut(s)	239, 551, 614, 813, 1799, 1924
Hpy188III	TCNNGA	7 cut(s)	461, 563, 584, 1204, 1274, 1534, 1653
Hpy8I	GTNNAC	9 cut(s)	56, 665, 1119, 1154, 1418, 1488, 1699, 1759, 1885
Hpy99I	CGWCG	3 cut(s)	551, 692, 1571
HpyAV	CCTTC	2 cut(s)	184, 1624
HpyCH4III	ACNGT	6 cut(s)	229, 704, 1081, 1294, 1634, 1687
HpyCH4IV	ACGT	7 cut(s)	52, 372, 402, 495, 525, 537, 1543
HpyF10VI	GCNNNNNNNGC	4 cut(s)	122, 724, 920, 1667
HpyF3I	CTNAG	4 cut(s)	198, 883, 892, 1329
HpySE526I	ACGT	7 cut(s)	52, 372, 402, 495, 525, 537, 1543
Hsp92I	GRCGYC	1 cut(s)	546
Hsp92II	CATG	5 cut(s)	796, 822, 1071, 1194, 1710
HspAI	GCGC	6 cut(s)	366, 617, 718, 746, 840, 1107
Kpn2I	TCCGGA	1 cut(s)	1652
KroI	GCCGGC	1 cut(s)	285
KroNI	GCCGGC	1 cut(s)	287
Ksp22I	TGATCA	1 cut(s)	1017
KspAI	GTTAAC	1 cut(s)	1885
KspI	CCGCGG	1 cut(s)	293
Kzo9I	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
LmnI	GCTCC	5 cut(s)	274, 488, 614, 1276, 1925
Lsp1109I	GCAGC	3 cut(s)	193, 1393, 1421
LweI	GCATC	3 cut(s)	873, 1169, 1333
MaeI	CTAG	4 cut(s)	279, 449, 741, 1349
MaeII	ACGT	7 cut(s)	52, 372, 402, 495, 525, 537, 1543
MaeIII	GTNAC	4 cut(s)	182, 274, 1599, 1861
MalI	GATC	8 cut(s)	104, 483, 542, 561, 649, 817, 1019, 1224
MboI	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
MboII	GAAGA	9 cut(s)	23, 56, 112, 419, 800, 838, 1245, 1510, 1583
MfeI	CAATTG	2 cut(s)	1044, 1470
MflI	RGATCY	4 cut(s)	102, 481, 647, 1222
MhlI	GDGCHC	2 cut(s)	271, 1650
MluCI	AATT	5 cut(s)	316, 1038, 1044, 1122, 1470
MlyI	GAGTC	2 cut(s)	693, 1919
MmeI	TCCRAC	5 cut(s)	406, 508, 529, 592, 1714
MroI	TCCGGA	1 cut(s)	1652
MroNI	GCCGGC	1 cut(s)	285
MroXI	GAANNNNTTC	1 cut(s)	1199
MseI	TTAA	4 cut(s)	1218, 1307, 1884, 1899
MslI	CAYNNNNRTG	1 cut(s)	1189
MspA1I	CMGCKG	1 cut(s)	292
MspI	CCGG	9 cut(s)	272, 286, 299, 334, 341, 348, 721, 950, 1653
MspR9I	CCNGG	4 cut(s)	572, 652, 950, 1104
MunI	CAATTG	2 cut(s)	1044, 1470
Mva1269I	GAATGC	2 cut(s)	842, 1725
MvaI	CCWGG	3 cut(s)	572, 652, 1104
MvnI	CGCG	2 cut(s)	292, 479
MwoI	GCNNNNNNNGC	4 cut(s)	122, 724, 920, 1667
NaeI	GCCGGC	1 cut(s)	287
NciI	CCSGG	1 cut(s)	950
NdeI	CATATG	2 cut(s)	772, 1693
NdeII	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
NgoMIV	GCCGGC	1 cut(s)	285
NlaIII	CATG	5 cut(s)	796, 822, 1071, 1194, 1710
NmuCI	GTSAC	3 cut(s)	182, 274, 1599
NspI	RCATGY	2 cut(s)	796, 1710
PaeR7I	CTCGAG	1 cut(s)	563
PaqCI	CACCTGC	2 cut(s)	380, 503
PceI	AGGCCT	1 cut(s)	890
PcsI	WCGNNNNNNNCGW	5 cut(s)	378, 420, 501, 543, 555
PctI	GAATGC	2 cut(s)	842, 1725
PdiI	GCCGGC	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	1199
PfeI	GAWTC	4 cut(s)	138, 337, 1099, 1138
PflFI	GACNNNGTC	4 cut(s)	374, 416, 437, 497
PkrI	GCNGC	5 cut(s)	208, 291, 672, 1408, 1411
PleI	GAGTC	2 cut(s)	692, 1919
PpsI	GAGTC	2 cut(s)	692, 1919
PpuMI	RGGWCCY	2 cut(s)	445, 568
Psp5II	RGGWCCY	2 cut(s)	445, 568
Psp6I	CCWGG	3 cut(s)	570, 650, 1102
PspFI	CCCAGC	1 cut(s)	619
PspGI	CCWGG	3 cut(s)	570, 650, 1102
PspPI	GGNCC	5 cut(s)	119, 445, 568, 712, 1893
PspPPI	RGGWCCY	2 cut(s)	445, 568
PstI	CTGCAG	1 cut(s)	1411
PsuI	RGATCY	4 cut(s)	102, 481, 647, 1222
PsyI	GACNNNGTC	4 cut(s)	374, 416, 437, 497
RigI	GGCCGGCC	1 cut(s)	289
RsaI	GTAC	7 cut(s)	231, 804, 992, 1286, 1419, 1684, 1821
RsaNI	GTAC	7 cut(s)	230, 803, 991, 1285, 1418, 1683, 1820
RseI	CAYNNNNRTG	1 cut(s)	1189
SacII	CCGCGG	1 cut(s)	293
SaqAI	TTAA	4 cut(s)	1218, 1307, 1884, 1899
SatI	GCNGC	5 cut(s)	207, 290, 671, 1407, 1410
Sau3AI	GATC	8 cut(s)	102, 481, 540, 559, 647, 815, 1017, 1222
Sau96I	GGNCC	5 cut(s)	119, 445, 568, 712, 1893
ScaI	AGTACT	1 cut(s)	1684
SchI	GAGTC	2 cut(s)	693, 1919
ScrFI	CCNGG	4 cut(s)	572, 652, 950, 1104
SduI	GDGCHC	2 cut(s)	271, 1650
SfaNI	GCATC	3 cut(s)	873, 1169, 1333
SfcI	CTRYAG	3 cut(s)	1407, 1686, 1837
Sfr274I	CTCGAG	1 cut(s)	563
Sfr303I	CCGCGG	1 cut(s)	293
SgrAI	CRCCGGYG	1 cut(s)	720
SgrBI	CCGCGG	1 cut(s)	293
SinI	GGWCC	4 cut(s)	119, 445, 568, 712
SlaI	CTCGAG	1 cut(s)	563
SmiMI	CAYNNNNRTG	1 cut(s)	1189
SmlI	CTYRAG	2 cut(s)	563, 1534
SmoI	CTYRAG	2 cut(s)	563, 1534
SpeI	ACTAGT	1 cut(s)	278
Sse9I	AATT	5 cut(s)	316, 1038, 1044, 1122, 1470
SseBI	AGGCCT	1 cut(s)	890
SsiI	CCGC	6 cut(s)	290, 292, 479, 670, 673, 923
SspI	AATATT	1 cut(s)	910
SspMI	CTAG	4 cut(s)	279, 449, 741, 1349
StuI	AGGCCT	1 cut(s)	890
StyD4I	CCNGG	4 cut(s)	570, 650, 948, 1102
StyI	CCWWGG	3 cut(s)	360, 448, 1393
TaaI	ACNGT	6 cut(s)	229, 704, 1081, 1294, 1634, 1687
TaiI	ACGT	7 cut(s)	55, 375, 405, 498, 528, 540, 1546
TaqI	TCGA	6 cut(s)	441, 564, 606, 638, 1205, 1341
TasI	AATT	5 cut(s)	316, 1038, 1044, 1122, 1470
TatI	WGTACW	4 cut(s)	229, 990, 1682, 1819
TauI	GCSGC	2 cut(s)	292, 673
TfiI	GAWTC	4 cut(s)	138, 337, 1099, 1138
Tru1I	TTAA	4 cut(s)	1218, 1307, 1884, 1899
Tru9I	TTAA	4 cut(s)	1218, 1307, 1884, 1899
TscAI	CASTG	1 cut(s)	1639
TseFI	GTSAC	3 cut(s)	182, 274, 1599
TseI	GCWGC	3 cut(s)	206, 1406, 1409
Tsp45I	GTSAC	3 cut(s)	182, 274, 1599
TspDTI	ATGAA	5 cut(s)	63, 105, 166, 1056, 1510
TspGWI	ACGGA	1 cut(s)	1201
TspRI	CASTG	1 cut(s)	1639
Tth111I	GACNNNGTC	4 cut(s)	374, 416, 437, 497
VpaK11BI	GGWCC	4 cut(s)	119, 445, 568, 712
XapI	RAATTY	1 cut(s)	316
XceI	RCATGY	2 cut(s)	796, 1710
XhoI	CTCGAG	1 cut(s)	563
XmaJI	CCTAGG	1 cut(s)	448
XmnI	GAANNNNTTC	1 cut(s)	1199
XspI	CTAG	4 cut(s)	279, 449, 741, 1349
ZrmI	AGTACT	1 cut(s)	1684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.