Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006001.1

Orthogroup ID

OG0003848

Physical Location & Seq

Genomic Coordinates Forward (+)

9727 .. 13406

Gene Structure 3680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006001.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

atgcattggactcccaacccggtccccgcgacccgacgacctgagtcggcgacctgctggaatcctccgtccggctacttcatggtgtcacaccggtgcgcgccgttcgattcatctcattgtcgccgaccttcctctggtactgtctcggcttcaattcaagaaatttacaagacgatgaaggaggcattggattttgtactgtccatggaattctggagaatgggcctgcgatggactctcagtcttctcatctcttactggcacctcctcttcgcctcgactactactcctccttccagatcaccgcctccctcatctccgtcgaggcccgtctgcatcatcaccggcgcgacttctggattgggcgccgccgcggcccatgctctctccgctcgtggcttctttgtggttctcgttggacgctcatctcgcttgttagaaaagacgatgatggaaattaagaggaagaatgagagtgcacagctgaaagctttcgaggttgatctctcatcattccagtcgattcttcagtttaaagcctccctacagcagtggctttccgactcgcaaatgcactcttcgatccaactcctaattaacaatgctggaatacttgctacctcgtctagattcacctctgaaggctatgatcagatgatggctacaaattacttgagtgcattttttcttagtaaactattgttaccgcttctcagaaacagcttgattccttcccgtatagtgaatgtcacatctttcacacatcgaagtgtatcgaatatacaggttgccaaggatactgtatctgggaagtgcttcagcagattaaaaagatacccatatgctcatgtatatgagtattccaaattgttcctactgctcttctcctatgagcttcatcgacaacttggcttgatggacatatctcgtcacgtctccgtcattgctgtggatcctggtgttgttgaaaccaacatcttgcgagaagttcctccatgcctatccagtttggctggtaaagttttgagaagtctttggctcttgcagtcacctgaagttggaatcagttccattctccatgcagcatttgctccaccagaaacatctggagtttacttttttggtggaaagggcaacactgtcagctcttctatgctttcatatgatgccaaacttgcacaggaactttggagtacatcgtctgatctatttttagagcgttccgttttaattgccgtagcagcagtaatgcttttcctagctgtgatcggtctttttctgtccgtccttcggcaccaacatgcaattcacatattcattgttagtggatggctacttgttgcaattacattcattctttgtggagcctttgtgatcctcaacaatgctgtttctgacacctgtatggcaatggaagaatgggtagaaaatccccatgctgaaacagcacttagcaacgtccttccatgtgttgaccagaaaaccacaaaccagacactgagccagagtaaaggaattatcaatgacatggtcactgttgtcaacacgttcatctacacctatgccaatacgtatccatcacattctgatctgtattattacaatcagtctggacctctgatgccagctctttgttacccatatgattctgagttaagagatactcagtgtggggatcaacaggtgtttattacaaatgcttctttggtaagaatcttccacttagactactttggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010506 GO:0010508 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short

Protein Analysis

580

Amino Acids

64.54

Weight (kDa)

8.39

Isoelectric Point (pI)

53.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04070 AT5G15940 AT5G15940 AT5G15940 AT5G15940
fragaria_vesca	FvH4_6g28040 FvH4_6g28040
malus_domestica	MD15G1141600.v1.1
prunus_persica	Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1
pyrus_communis	pycom15g12790
rosa_chinensis	RchiOBHm_Chr2g0131741 RchiOBHm_Chr5g0041951 RchiOBHm_Chr6g0247031
rosa_laevigata	RLG00000015229 RLG00000019207
rosa_multiflora	Rmu_sc0006001.1_g000002 Rmu_sc0009880.1_g000012
rosa_roxburghii	Rroxscaffold_1G00038630 Rroxscaffold_2G00112660
rosa_rugosa	Rorug05G0197200 Rorug07G0258400
rosa_samantha	Rh2AG351900 Rh2BG359000 Rh5AG282000 Rh5BG287700 Rh5DG296500 Rh6BG031500
rosa_wichuraiana	Rw0G001410 Rw2G028590 Rw2G028600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	62
AccB1I	GGYRCC	3 cut(s)	264, 368, 1296
AccBSI	CCGCTC	1 cut(s)	395
AccII	CGCG	4 cut(s)	29, 101, 353, 377
AciI	CCGC	7 cut(s)	27, 308, 372, 375, 377, 393, 710
AclWI	GGATC	5 cut(s)	580, 950, 963, 1372, 1686
AcsI	RAATTY	2 cut(s)	165, 212
AcuI	CTGAAG	4 cut(s)	515, 663, 805, 1077
AcyI	GRCGYC	1 cut(s)	369
AfaI	GTAC	3 cut(s)	142, 201, 1198
AfiI	CCNNNNNNNGG	4 cut(s)	71, 137, 1061, 1293
AflIII	ACRYGT	1 cut(s)	1548
AgeI	ACCGGT	1 cut(s)	93
AgsI	TTSAA	3 cut(s)	156, 161, 971
AhdI	GACNNNNNGTC	1 cut(s)	243
AjiI	CACGTC	1 cut(s)	937
AjnI	CCWGG	1 cut(s)	958
AjuI	GAANNNNNNNTTGG	4 cut(s)	173, 205, 1293, 1325
AleI	CACNNNNGTG	1 cut(s)	94
AluBI	AGCT	7 cut(s)	487, 494, 726, 898, 1149, 1265, 1631
AluI	AGCT	7 cut(s)	487, 494, 726, 898, 1149, 1265, 1631
Alw21I	GWGCWC	1 cut(s)	484
Alw26I	GTCTC	2 cut(s)	151, 943
Alw44I	GTGCAC	1 cut(s)	480
AlwI	GGATC	5 cut(s)	580, 950, 963, 1372, 1686
AlwNI	CAGNNNCTG	1 cut(s)	1501
AoxI	GGCC	3 cut(s)	226, 329, 378
ApaLI	GTGCAC	1 cut(s)	480
ApeKI	GCWGC	2 cut(s)	1085, 1244
ApoI	RAATTY	2 cut(s)	165, 212
AsiGI	ACCGGT	1 cut(s)	93
Asp700I	GAANNNNTTC	3 cut(s)	494, 818, 1069
AspLEI	GCGC	4 cut(s)	101, 103, 353, 371
AspS9I	GGNCC	5 cut(s)	22, 226, 330, 379, 1616
AsuC2I	CCSGG	1 cut(s)	20
AsuHPI	GGTGA	4 cut(s)	297, 337, 628, 1044
AvaII	GGWCC	2 cut(s)	22, 1616
BaeGI	GKGCMC	1 cut(s)	484
BamHI	GGATCC	1 cut(s)	955
BanI	GGYRCC	3 cut(s)	264, 368, 1296
BauI	CACGAG	1 cut(s)	396
BbsI	GAAGAC	1 cut(s)	239
Bbv12I	GWGCWC	1 cut(s)	484
BbvI	GCAGC	2 cut(s)	1097, 1256
BccI	CCATC	6 cut(s)	228, 448, 655, 913, 1326, 1588
BceAI	ACGGC	2 cut(s)	88, 1223
BciT130I	CCWGG	1 cut(s)	960
BciVI	GTATCC	2 cut(s)	793, 1587
BclI	TGATCA	1 cut(s)	652
BcnI	CCSGG	1 cut(s)	20
BcoDI	GTCTC	2 cut(s)	151, 943
BfaI	CTAG	2 cut(s)	630, 1262
BfmI	CTRYAG	1 cut(s)	548
BfoI	RGCGCY	1 cut(s)	372
BfuAI	ACCTGC	1 cut(s)	62
BfuI	GTATCC	2 cut(s)	793, 1587
BglI	GCCNNNNNGGC	1 cut(s)	377
BisI	GCNGC	5 cut(s)	372, 375, 378, 1086, 1245
BlsI	GCNGC	5 cut(s)	373, 376, 379, 1087, 1246
Bme1390I	CCNGG	2 cut(s)	20, 960
Bme18I	GGWCC	2 cut(s)	22, 1616
BmeRI	GACNNNNNGTC	1 cut(s)	243
BmgBI	CACGTC	1 cut(s)	937
BmgT120I	GGNCC	5 cut(s)	22, 226, 330, 379, 1616
BmiI	GGNNCC	6 cut(s)	24, 266, 370, 957, 1298, 1369
BmrFI	CCNGG	2 cut(s)	20, 960
BmsI	GCATC	3 cut(s)	348, 1159, 1614
BoxI	GACNNNNGTC	1 cut(s)	43
BpiI	GAAGAC	1 cut(s)	239
BpmI	CTGGAG	2 cut(s)	238, 1131
BpuEI	CTTGAG	1 cut(s)	697
BpuMI	CCSGG	1 cut(s)	20
BsaAI	YACGTR	1 cut(s)	1575
BsaHI	GRCGYC	1 cut(s)	369
BsaJI	CCNNGG	3 cut(s)	207, 375, 795
BsaWI	WCCGGW	1 cut(s)	93
BsaXI	ACNNNNNCTCC	6 cut(s)	274, 277, 304, 307, 1359, 1389
Bsc4I	CCNNNNNNNGG	4 cut(s)	71, 137, 1061, 1293
Bse118I	RCCGGY	2 cut(s)	93, 347
Bse1I	ACTGG	3 cut(s)	266, 520, 1008
Bse3DI	GCAATG	2 cut(s)	945, 1419
BseBI	CCWGG	1 cut(s)	960
BseDI	CCNNGG	3 cut(s)	207, 375, 795
BseGI	GGATG	1 cut(s)	1337
BseLI	CCNNNNNNNGG	4 cut(s)	71, 137, 1061, 1293
BseMI	GCAATG	2 cut(s)	945, 1419
BseMII	CTCAG	6 cut(s)	33, 256, 730, 1493, 1644, 1682
BseNI	ACTGG	3 cut(s)	266, 520, 1008
BsePI	GCGCGC	1 cut(s)	99
BseRI	GAGGAG	2 cut(s)	260, 282
BseSI	GKGCMC	1 cut(s)	484
BseXI	GCAGC	2 cut(s)	1097, 1256
Bsh1236I	CGCG	4 cut(s)	29, 101, 353, 377
BshFI	GGCC	3 cut(s)	228, 331, 380
BshNI	GGYRCC	3 cut(s)	264, 368, 1296
BshTI	ACCGGT	1 cut(s)	93
BsiHKAI	GWGCWC	1 cut(s)	484
BsiSI	CCGG	4 cut(s)	20, 72, 94, 348
BslFI	GGGAC	1 cut(s)	8
BslI	CCNNNNNNNGG	4 cut(s)	71, 137, 1061, 1293
BsmAI	GTCTC	2 cut(s)	151, 943
BsmBI	CGTCTC	1 cut(s)	943
BsmFI	GGGAC	1 cut(s)	8
BsnI	GGCC	3 cut(s)	228, 331, 380
Bsp1286I	GDGCHC	1 cut(s)	484
Bsp19I	CCATGG	1 cut(s)	207
BspACI	CCGC	7 cut(s)	27, 308, 372, 375, 377, 393, 710
BspANI	GGCC	3 cut(s)	228, 331, 380
BspCNI	CTCAG	6 cut(s)	34, 255, 729, 1494, 1645, 1681
BspFNI	CGCG	4 cut(s)	29, 101, 353, 377
BspLI	GGNNCC	6 cut(s)	24, 266, 370, 957, 1298, 1369
BspMI	ACCTGC	1 cut(s)	62
BspPI	GGATC	5 cut(s)	580, 950, 963, 1372, 1686
BspQI	GCTCTTC	2 cut(s)	890, 1156
BspT107I	GGYRCC	3 cut(s)	264, 368, 1296
BsrBI	CCGCTC	1 cut(s)	395
BsrDI	GCAATG	2 cut(s)	945, 1419
BsrFI	RCCGGY	2 cut(s)	93, 347
BsrI	ACTGG	3 cut(s)	266, 520, 1008
BssAI	RCCGGY	2 cut(s)	93, 347
BssECI	CCNNGG	3 cut(s)	207, 375, 795
BssHII	GCGCGC	1 cut(s)	99
BssNI	GRCGYC	1 cut(s)	369
BssSI	CACGAG	1 cut(s)	396
BssT1I	CCWWGG	2 cut(s)	207, 795
Bst2BI	CACGAG	1 cut(s)	396
Bst2UI	CCWGG	1 cut(s)	960
Bst4CI	ACNGT	5 cut(s)	145, 204, 805, 1144, 1540
Bst6I	CTCTTC	4 cut(s)	278, 586, 890, 1156
BstACI	GRCGYC	1 cut(s)	369
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstBAI	YACGTR	1 cut(s)	1575
BstC8I	GCNNGC	3 cut(s)	101, 230, 1629
BstDEI	CTNAG	9 cut(s)	42, 242, 692, 716, 1454, 1502, 1653, 1668, 1726
BstDSI	CCRYGG	2 cut(s)	207, 375
BstF5I	GGATG	1 cut(s)	1337
BstFNI	CGCG	4 cut(s)	29, 101, 353, 377
BstH2I	RGCGCY	1 cut(s)	372
BstHHI	GCGC	4 cut(s)	101, 103, 353, 371
BstMAI	GTCTC	2 cut(s)	151, 943
BstMWI	GCNNNNNNNGC	8 cut(s)	377, 383, 392, 432, 1091, 1178, 1244, 1448
BstNI	CCWGG	1 cut(s)	960
BstNSI	RCATGY	1 cut(s)	1307
BstPAI	GACNNNNGTC	1 cut(s)	43
BstSCI	CCNGG	2 cut(s)	18, 958
BstSFI	CTRYAG	1 cut(s)	548
BstSLI	GKGCMC	1 cut(s)	484
BstSNI	TACGTA	1 cut(s)	1575
BstUI	CGCG	4 cut(s)	29, 101, 353, 377
BstV1I	GCAGC	2 cut(s)	1097, 1256
BstV2I	GAAGAC	1 cut(s)	239
BstX2I	RGATCY	1 cut(s)	955
BstYI	RGATCY	1 cut(s)	955
BsuI	GTATCC	2 cut(s)	793, 1587
BsuRI	GGCC	3 cut(s)	228, 331, 380
BtgI	CCRYGG	2 cut(s)	207, 375
BtgZI	GCGATG	1 cut(s)	247
BtrI	CACGTC	1 cut(s)	937
BtsCI	GGATG	1 cut(s)	1337
BtsI	GCAGTG	1 cut(s)	560
BtsIMutI	CAGTG	5 cut(s)	560, 1140, 1499, 1536, 1676
BveI	ACCTGC	1 cut(s)	62
Cac8I	GCNNGC	3 cut(s)	101, 230, 1629
CaiI	CAGNNNCTG	1 cut(s)	1501
CfoI	GCGC	4 cut(s)	101, 103, 353, 371
Cfr10I	RCCGGY	2 cut(s)	93, 347
Cfr13I	GGNCC	5 cut(s)	22, 226, 330, 379, 1616
Cfr42I	CCGCGG	1 cut(s)	378
CseI	GACGC	1 cut(s)	432
Csp6I	GTAC	3 cut(s)	141, 200, 1197
CspAI	ACCGGT	1 cut(s)	93
CviQI	GTAC	3 cut(s)	141, 200, 1197
DdeI	CTNAG	9 cut(s)	42, 242, 692, 716, 1454, 1502, 1653, 1668, 1726
DinI	GGCGCC	1 cut(s)	370
DraI	TTTAAA	1 cut(s)	538
DriI	GACNNNNNGTC	1 cut(s)	243
Eam1104I	CTCTTC	4 cut(s)	278, 586, 890, 1156
Eam1105I	GACNNNNNGTC	1 cut(s)	243
EarI	CTCTTC	4 cut(s)	278, 586, 890, 1156
Eco105I	TACGTA	1 cut(s)	1575
Eco130I	CCWWGG	2 cut(s)	207, 795
Eco47I	GGWCC	2 cut(s)	22, 1616
Eco57I	CTGAAG	4 cut(s)	515, 663, 805, 1077
EcoRI	GAATTC	1 cut(s)	212
EcoRII	CCWGG	1 cut(s)	958
EcoT14I	CCWWGG	2 cut(s)	207, 795
EcoT22I	ATGCAT	1 cut(s)	6
EgeI	GGCGCC	1 cut(s)	370
EheI	GGCGCC	1 cut(s)	370
ErhI	CCWWGG	2 cut(s)	207, 795
Esp3I	CGTCTC	1 cut(s)	943
FaqI	GGGAC	1 cut(s)	8
FauI	CCCGC	1 cut(s)	34
FauNDI	CATATG	3 cut(s)	844, 1165, 1645
FbaI	TGATCA	1 cut(s)	652
Fnu4HI	GCNGC	5 cut(s)	372, 375, 378, 1086, 1245
FokI	GGATG	1 cut(s)	1344
Fsp4HI	GCNGC	5 cut(s)	372, 375, 378, 1086, 1245
FspBI	CTAG	2 cut(s)	630, 1262
GlaI	GCGC	4 cut(s)	100, 102, 352, 370
GluI	GCNGC	5 cut(s)	372, 375, 378, 1086, 1245
GsuI	CTGGAG	2 cut(s)	238, 1131
HaeII	RGCGCY	1 cut(s)	372
HaeIII	GGCC	3 cut(s)	228, 331, 380
HapII	CCGG	4 cut(s)	20, 72, 94, 348
HgaI	GACGC	1 cut(s)	432
HhaI	GCGC	4 cut(s)	101, 103, 353, 371
Hin1I	GRCGYC	1 cut(s)	369
Hin6I	GCGC	4 cut(s)	99, 101, 351, 369
HinP1I	GCGC	4 cut(s)	99, 101, 351, 369
HincII	GTYRAC	2 cut(s)	1477, 1546
HindII	GTYRAC	2 cut(s)	1477, 1546
HindIII	AAGCTT	1 cut(s)	492
HpaII	CCGG	4 cut(s)	20, 72, 94, 348
HphI	GGTGA	4 cut(s)	297, 337, 628, 1044
Hpy166II	GTNNAC	5 cut(s)	482, 698, 1117, 1477, 1546
Hpy188I	TCNGA	9 cut(s)	565, 643, 657, 719, 1207, 1399, 1591, 1623, 1654
Hpy188III	TCNNGA	7 cut(s)	161, 217, 300, 360, 630, 1110, 1614
Hpy8I	GTNNAC	5 cut(s)	482, 698, 1117, 1477, 1546
Hpy99I	CGWCG	2 cut(s)	39, 328
HpyAV	CCTTC	7 cut(s)	141, 175, 306, 638, 744, 1301, 1475
HpyCH4III	ACNGT	5 cut(s)	145, 204, 805, 1144, 1540
HpyCH4IV	ACGT	4 cut(s)	936, 1461, 1550, 1574
HpyF10VI	GCNNNNNNNGC	8 cut(s)	377, 383, 392, 432, 1091, 1178, 1244, 1448
HpyF3I	CTNAG	9 cut(s)	42, 242, 692, 716, 1454, 1502, 1653, 1668, 1726
HpySE526I	ACGT	4 cut(s)	936, 1461, 1550, 1574
Hsp92I	GRCGYC	1 cut(s)	369
HspAI	GCGC	4 cut(s)	99, 101, 351, 369
KasI	GGCGCC	1 cut(s)	368
Ksp22I	TGATCA	1 cut(s)	652
KspI	CCGCGG	1 cut(s)	378
LguI	GCTCTTC	2 cut(s)	890, 1156
LmnI	GCTCC	2 cut(s)	1099, 1367
Lsp1109I	GCAGC	2 cut(s)	1097, 1256
LweI	GCATC	3 cut(s)	348, 1159, 1614
MaeI	CTAG	2 cut(s)	630, 1262
MaeII	ACGT	4 cut(s)	936, 1461, 1550, 1574
MaeIII	GTNAC	7 cut(s)	87, 705, 751, 932, 1050, 1534, 1637
MbiI	CCGCTC	1 cut(s)	395
MboII	GAAGA	9 cut(s)	239, 265, 481, 521, 573, 877, 1143, 1430, 1711
MflI	RGATCY	1 cut(s)	955
MhlI	GDGCHC	1 cut(s)	484
Mly113I	GGCGCC	1 cut(s)	369
MlyI	GAGTC	4 cut(s)	4, 53, 232, 560
MmeI	TCCRAC	4 cut(s)	400, 588, 613, 1042
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	3 cut(s)	494, 818, 1069
MseI	TTAA	6 cut(s)	462, 537, 600, 830, 1232, 1658
MslI	CAYNNNNRTG	6 cut(s)	94, 771, 855, 950, 1302, 1406
MspA1I	CMGCKG	2 cut(s)	377, 487
MspI	CCGG	4 cut(s)	20, 72, 94, 348
MspR9I	CCNGG	2 cut(s)	20, 960
MvaI	CCWGG	1 cut(s)	960
MvnI	CGCG	4 cut(s)	29, 101, 353, 377
MwoI	GCNNNNNNNGC	8 cut(s)	377, 383, 392, 432, 1091, 1178, 1244, 1448
NarI	GGCGCC	1 cut(s)	369
NciI	CCSGG	1 cut(s)	20
NcoI	CCATGG	1 cut(s)	207
NdeI	CATATG	3 cut(s)	844, 1165, 1645
NlaIV	GGNNCC	6 cut(s)	24, 266, 370, 957, 1298, 1369
NmeAIII	GCCGAG	1 cut(s)	128
NmuCI	GTSAC	5 cut(s)	87, 751, 932, 1050, 1534
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1307
OliI	CACNNNNGTG	1 cut(s)	94
PauI	GCGCGC	1 cut(s)	99
PciSI	GCTCTTC	2 cut(s)	890, 1156
PdmI	GAANNNNTTC	3 cut(s)	494, 818, 1069
PfeI	GAWTC	8 cut(s)	61, 110, 526, 633, 730, 1065, 1649, 1716
PflFI	GACNNNGTC	1 cut(s)	1532
PinAI	ACCGGT	1 cut(s)	93
PkrI	GCNGC	5 cut(s)	373, 376, 379, 1087, 1246
PleI	GAGTC	4 cut(s)	4, 52, 232, 560
PluTI	GGCGCC	1 cut(s)	372
PpsI	GAGTC	4 cut(s)	4, 52, 232, 560
Ppu21I	YACGTR	1 cut(s)	1575
PshAI	GACNNNNGTC	1 cut(s)	43
Psp6I	CCWGG	1 cut(s)	958
PspGI	CCWGG	1 cut(s)	958
PspN4I	GGNNCC	6 cut(s)	24, 266, 370, 957, 1298, 1369
PspPI	GGNCC	5 cut(s)	22, 226, 330, 379, 1616
PstNI	CAGNNNCTG	1 cut(s)	1501
PsuI	RGATCY	1 cut(s)	955
PsyI	GACNNNGTC	1 cut(s)	1532
PteI	GCGCGC	1 cut(s)	99
PvuII	CAGCTG	1 cut(s)	487
RsaI	GTAC	3 cut(s)	142, 201, 1198
RsaNI	GTAC	3 cut(s)	141, 200, 1197
RseI	CAYNNNNRTG	6 cut(s)	94, 771, 855, 950, 1302, 1406
SacII	CCGCGG	1 cut(s)	378
SapI	GCTCTTC	2 cut(s)	890, 1156
SaqAI	TTAA	6 cut(s)	462, 537, 600, 830, 1232, 1658
SatI	GCNGC	5 cut(s)	372, 375, 378, 1086, 1245
Sau96I	GGNCC	5 cut(s)	22, 226, 330, 379, 1616
SchI	GAGTC	4 cut(s)	4, 53, 232, 560
ScrFI	CCNGG	2 cut(s)	20, 960
SduI	GDGCHC	1 cut(s)	484
SfaNI	GCATC	3 cut(s)	348, 1159, 1614
SfcI	CTRYAG	1 cut(s)	548
SfoI	GGCGCC	1 cut(s)	370
Sfr303I	CCGCGG	1 cut(s)	378
SgrAI	CRCCGGYG	2 cut(s)	93, 347
SgrBI	CCGCGG	1 cut(s)	378
SinI	GGWCC	2 cut(s)	22, 1616
SmiMI	CAYNNNNRTG	6 cut(s)	94, 771, 855, 950, 1302, 1406
SmlI	CTYRAG	1 cut(s)	676
SmoI	CTYRAG	1 cut(s)	676
SnaBI	TACGTA	1 cut(s)	1575
SsiI	CCGC	7 cut(s)	27, 308, 372, 375, 377, 393, 710
SspDI	GGCGCC	1 cut(s)	368
SspMI	CTAG	2 cut(s)	630, 1262
StyD4I	CCNGG	2 cut(s)	18, 958
StyI	CCWWGG	2 cut(s)	207, 795
TaaI	ACNGT	5 cut(s)	145, 204, 805, 1144, 1540
TaiI	ACGT	4 cut(s)	939, 1464, 1553, 1577
TaqI	TCGA	9 cut(s)	108, 281, 326, 498, 524, 584, 769, 779, 904
TaqII	GACCGA	1 cut(s)	1262
TatI	WGTACW	2 cut(s)	199, 1196
TauI	GCSGC	3 cut(s)	374, 377, 380
TfiI	GAWTC	8 cut(s)	61, 110, 526, 633, 730, 1065, 1649, 1716
Tru1I	TTAA	6 cut(s)	462, 537, 600, 830, 1232, 1658
Tru9I	TTAA	6 cut(s)	462, 537, 600, 830, 1232, 1658
TscAI	CASTG	5 cut(s)	560, 1147, 1506, 1543, 1676
TseFI	GTSAC	5 cut(s)	87, 751, 932, 1050, 1534
TseI	GCWGC	2 cut(s)	1085, 1244
Tsp45I	GTSAC	5 cut(s)	87, 751, 932, 1050, 1534
TspDTI	ATGAA	8 cut(s)	70, 102, 194, 890, 1152, 1309, 1345, 1543
TspGWI	ACGGA	5 cut(s)	57, 312, 931, 1216, 1276
TspRI	CASTG	5 cut(s)	560, 1147, 1506, 1543, 1676
Tth111I	GACNNNGTC	1 cut(s)	1532
VneI	GTGCAC	1 cut(s)	480
VpaK11BI	GGWCC	2 cut(s)	22, 1616
XapI	RAATTY	2 cut(s)	165, 212
XbaI	TCTAGA	1 cut(s)	629
XceI	RCATGY	1 cut(s)	1307
XmnI	GAANNNNTTC	3 cut(s)	494, 818, 1069
XspI	CTAG	2 cut(s)	630, 1262
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.