Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0003848

Physical Location & Seq

Genomic Coordinates Forward (+)

36655490 .. 36659387

Gene Structure 3898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG287700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGAAGGAGGCATTGGATTTTGTACTGTCCATGGAATTCTGGAGAATGGGCCTGCGATGGACTCTCAGTCTTCTCATCTCTTACTGGCACCTCCTCTTTGCCTCGACTACTACTCCTCCTTCCAGATCACCGCCTCCCTCATCTCCGTCGAGGCCCGTCTGCATCATCACCGGCGCGACTTCTGGATTGGGCGCCGCCGCGGCCCATGCTCTCTCCGCTCGTGGCTTCTTTGTGGTTCTCGTTGGACGCTCATCTCGCTTGTTAGAAAAGACGATGATGGAAATTAAGAGGAAGAATGAGAGTGCACAGCTGAAAGCTTTCGAGGTTGATCTCTCATCATTCCAGTCGATTCTTCAGTTTAAAGCCTCCCTACAGCAGTGGCTTTCCGACTCGCAAATGCACTCTTCGATCCATCTCCTAATTAACAATGCTGGAATACTTGCTACCTCGTCTAGATTCACCTCTGAAGGCTATGATCAGATGATGGCTACAAATTACTTGAGTGCATTTTTTCTTAGTAAACTATTGTTACCGCTTCTCAGAAACAGCTTGATTCCTTCCCGTATAGTGAATGTCACATCTTTCACACATCGAAGTGTATCGAATATACAGGTTGCCAAGGATACTGTATCTGGGAAGTGCTTCAGCAGATTAAAAAGATACCCATATGCTCATGTATATGAGTATTCCAAATTGTTTCTACTGCTCTTCTCCTATGAGCTTCATCGCCAACTTGGCTTGATGGACATATCTCGTCACGTCTCCGTCATTGCTGTGGATCCTGGTGTTGTTGAAACCAACATCTTGCGAGAAGTTCCTCCATGCCTATCCAGTTTGGCCAATAAAGTTTTGAGAAGTCTTTGGTTCTTGCAGTCACCTGAAGTTGGAATCAGTTCCATTCTCGATGCAGCATTTGCTCCACCAGAAACATCTGGAGTTTACTTTTTTGGTGGAAAGGGCAACACTAGTCACAGCTTGCTTTCAAGGAAACCTCCACTTCTGTATCAAACTTTGTATCATAGGCGTTCCGTTTTAATTGCCATAGAAGCAGTAATGCTTTTCCTAGCTGTGATCGGTCTTTTTCTGTCCGTCCTTCGGCACCAACATGCAATTCACATATTCATTGTTAGTGGATGGCTACTTGTTGCAATTACATTCATTCTTTGTGGAGCCTTTGTGATCCTCAACAATGCTGTTTCTGACACCTGTATGGCAATGGAAGAATGGGTAGAAAATCCCCACGCTGAAACAGCACTTAGCAATGTCCTTCCATGTGTTGACCAAAAAACCACAAACCACACACTGAGCCAGAGTAAAGGAATTATCAATGACATGGTCACTGTTGTCAACACGTTCATCTACACCTATGCCAATACGTATCCATCGCATTCTGATCTGTATTATTACAATCAGTCTGGACCTCTGATGCCAGCTCTTTGTTACCCATATGATTCTGAGTTAAGAGATACTCAGTGTGGGGATCAACAGGTGTCTATTACAAATGCTTCTTTGGTTTGGCAGAACTATACATGTGAAGTCTCAGCATCTGGGATGTGCATCACTCCCGGAAGGGTGAAGCCAGAGATCTACACTCAGCTAGTTGCAGTAGTTAATGAGAGCTATGCACTACAGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010506 GO:0010508 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short

Protein Analysis

545

Amino Acids

60.76

Weight (kDa)

8.42

Isoelectric Point (pI)

49.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
adh_short	PF00106	53 - 196	1.5e-22	short chain dehydrogenase
adh_short_C2	PF13561	58 - 202	1.2e-13	Enoyl-(Acyl carrier protein) reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04070 AT5G15940 AT5G15940 AT5G15940 AT5G15940
fragaria_vesca	FvH4_6g28040 FvH4_6g28040
malus_domestica	MD15G1141600.v1.1
prunus_persica	Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1
pyrus_communis	pycom15g12790
rosa_chinensis	RchiOBHm_Chr2g0131741 RchiOBHm_Chr5g0041951 RchiOBHm_Chr6g0247031
rosa_laevigata	RLG00000015229 RLG00000019207
rosa_multiflora	Rmu_sc0006001.1_g000002 Rmu_sc0009880.1_g000012
rosa_roxburghii	Rroxscaffold_1G00038630 Rroxscaffold_2G00112660
rosa_rugosa	Rorug05G0197200 Rorug07G0258400
rosa_samantha	Rh2AG351900 Rh2BG359000 Rh5AG282000 Rh5BG287700 Rh5DG296500 Rh6BG031500
rosa_wichuraiana	Rw0G001410 Rw2G028590 Rw2G028600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	87, 191, 1098
AccBSI	CCGCTC	1 cut(s)	218
AccII	CGCG	2 cut(s)	176, 200
AciI	CCGC	6 cut(s)	131, 195, 198, 200, 216, 533
AclWI	GGATC	5 cut(s)	403, 773, 786, 1174, 1488
AcoI	YGGCCR	1 cut(s)	837
AcsI	RAATTY	1 cut(s)	35
AcuI	CTGAAG	4 cut(s)	338, 486, 628, 900
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	1 cut(s)	24
AfiI	CCNNNNNNNGG	2 cut(s)	884, 1095
AflIII	ACRYGT	2 cut(s)	1350, 1529
AgsI	TTSAA	2 cut(s)	794, 984
AhdI	GACNNNNNGTC	1 cut(s)	66
AhlI	ACTAGT	1 cut(s)	965
AjiI	CACGTC	1 cut(s)	760
AjnI	CCWGG	1 cut(s)	781
AjuI	GAANNNNNNNTTGG	3 cut(s)	28, 1095, 1127
AluBI	AGCT	9 cut(s)	310, 317, 549, 721, 975, 1067, 1433, 1597, 1620
AluI	AGCT	9 cut(s)	310, 317, 549, 721, 975, 1067, 1433, 1597, 1620
Alw21I	GWGCWC	1 cut(s)	307
Alw26I	GTCTC	2 cut(s)	766, 1543
Alw44I	GTGCAC	1 cut(s)	303
AlwI	GGATC	5 cut(s)	403, 773, 786, 1174, 1488
AlwNI	CAGNNNCTG	1 cut(s)	1547
AoxI	GGCC	4 cut(s)	49, 152, 201, 837
ApaLI	GTGCAC	1 cut(s)	303
ApeKI	GCWGC	1 cut(s)	908
ApoI	RAATTY	1 cut(s)	35
Asp700I	GAANNNNTTC	3 cut(s)	317, 641, 892
AspLEI	GCGC	2 cut(s)	176, 194
AspS9I	GGNCC	4 cut(s)	49, 153, 202, 1418
AsuC2I	CCSGG	1 cut(s)	1566
AsuHPI	GGTGA	5 cut(s)	120, 160, 451, 867, 1585
AvaII	GGWCC	1 cut(s)	1418
BaeGI	GKGCMC	1 cut(s)	307
BaeI	ACNNNNGTAYC	2 cut(s)	986, 1019
BalI	TGGCCA	1 cut(s)	839
BamHI	GGATCC	1 cut(s)	778
BanI	GGYRCC	3 cut(s)	87, 191, 1098
BauI	CACGAG	1 cut(s)	219
BbsI	GAAGAC	1 cut(s)	62
Bbv12I	GWGCWC	1 cut(s)	307
BbvI	GCAGC	1 cut(s)	920
BccI	CCATC	7 cut(s)	51, 271, 420, 478, 736, 1128, 1390
BciT130I	CCWGG	1 cut(s)	783
BciVI	GTATCC	2 cut(s)	616, 1389
BclI	TGATCA	1 cut(s)	475
BcnI	CCSGG	1 cut(s)	1566
BcoDI	GTCTC	2 cut(s)	766, 1543
BcuI	ACTAGT	1 cut(s)	965
BfaI	CTAG	4 cut(s)	453, 966, 1064, 1598
BfmI	CTRYAG	2 cut(s)	371, 1628
BfoI	RGCGCY	1 cut(s)	195
BfuI	GTATCC	2 cut(s)	616, 1389
BglI	GCCNNNNNGGC	2 cut(s)	200, 735
BglII	AGATCT	1 cut(s)	1584
BisI	GCNGC	4 cut(s)	195, 198, 201, 909
BlsI	GCNGC	4 cut(s)	196, 199, 202, 910
Bme1390I	CCNGG	2 cut(s)	783, 1566
Bme18I	GGWCC	1 cut(s)	1418
BmeRI	GACNNNNNGTC	1 cut(s)	66
BmgBI	CACGTC	1 cut(s)	760
BmgT120I	GGNCC	4 cut(s)	49, 153, 202, 1418
BmiI	GGNNCC	5 cut(s)	89, 193, 780, 1100, 1171
BmrFI	CCNGG	2 cut(s)	783, 1566
BmsI	GCATC	5 cut(s)	171, 895, 1416, 1553, 1566
BpiI	GAAGAC	1 cut(s)	62
BpmI	CTGGAG	2 cut(s)	61, 954
BpuEI	CTTGAG	1 cut(s)	520
BpuMI	CCSGG	1 cut(s)	1566
BsaAI	YACGTR	1 cut(s)	1377
BsaBI	GATNNNNATC	1 cut(s)	1556
BsaHI	GRCGYC	1 cut(s)	192
BsaJI	CCNNGG	3 cut(s)	30, 198, 618
BsaXI	ACNNNNNCTCC	6 cut(s)	97, 100, 127, 130, 1161, 1191
Bsc4I	CCNNNNNNNGG	2 cut(s)	884, 1095
Bse118I	RCCGGY	1 cut(s)	170
Bse1I	ACTGG	3 cut(s)	89, 343, 831
Bse3DI	GCAATG	3 cut(s)	768, 1221, 1267
Bse8I	GATNNNNATC	1 cut(s)	1556
BseBI	CCWGG	1 cut(s)	783
BseDI	CCNNGG	3 cut(s)	30, 198, 618
BseGI	GGATG	2 cut(s)	1139, 1557
BseJI	GATNNNNATC	1 cut(s)	1556
BseLI	CCNNNNNNNGG	2 cut(s)	884, 1095
BseMI	GCAATG	3 cut(s)	768, 1221, 1267
BseMII	CTCAG	7 cut(s)	79, 553, 1295, 1446, 1484, 1554, 1607
BseNI	ACTGG	3 cut(s)	89, 343, 831
BseRI	GAGGAG	2 cut(s)	83, 105
BseSI	GKGCMC	1 cut(s)	307
BseXI	GCAGC	1 cut(s)	920
Bsh1236I	CGCG	2 cut(s)	176, 200
BshFI	GGCC	4 cut(s)	51, 154, 203, 839
BshNI	GGYRCC	3 cut(s)	87, 191, 1098
BsiHKAI	GWGCWC	1 cut(s)	307
BsiSI	CCGG	2 cut(s)	171, 1566
BslI	CCNNNNNNNGG	2 cut(s)	884, 1095
BsmAI	GTCTC	2 cut(s)	766, 1543
BsmBI	CGTCTC	1 cut(s)	766
BsmI	GAATGC	1 cut(s)	1387
BsnI	GGCC	4 cut(s)	51, 154, 203, 839
Bsp1286I	GDGCHC	1 cut(s)	307
Bsp19I	CCATGG	1 cut(s)	30
BspACI	CCGC	6 cut(s)	131, 195, 198, 200, 216, 533
BspANI	GGCC	4 cut(s)	51, 154, 203, 839
BspCNI	CTCAG	7 cut(s)	78, 552, 1296, 1447, 1483, 1553, 1606
BspFNI	CGCG	2 cut(s)	176, 200
BspLI	GGNNCC	5 cut(s)	89, 193, 780, 1100, 1171
BspPI	GGATC	5 cut(s)	403, 773, 786, 1174, 1488
BspQI	GCTCTTC	1 cut(s)	713
BspT107I	GGYRCC	3 cut(s)	87, 191, 1098
BsrBI	CCGCTC	1 cut(s)	218
BsrDI	GCAATG	3 cut(s)	768, 1221, 1267
BsrFI	RCCGGY	1 cut(s)	170
BsrI	ACTGG	3 cut(s)	89, 343, 831
BssAI	RCCGGY	1 cut(s)	170
BssECI	CCNNGG	3 cut(s)	30, 198, 618
BssNI	GRCGYC	1 cut(s)	192
BssSI	CACGAG	1 cut(s)	219
BssT1I	CCWWGG	2 cut(s)	30, 618
Bst2BI	CACGAG	1 cut(s)	219
Bst2UI	CCWGG	1 cut(s)	783
Bst4CI	ACNGT	3 cut(s)	27, 628, 1342
Bst6I	CTCTTC	2 cut(s)	409, 713
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	1 cut(s)	914
BstBAI	YACGTR	1 cut(s)	1377
BstC8I	GCNNGC	3 cut(s)	53, 977, 1431
BstDEI	CTNAG	9 cut(s)	65, 515, 539, 1256, 1304, 1455, 1470, 1540, 1593
BstDSI	CCRYGG	2 cut(s)	30, 198
BstF5I	GGATG	2 cut(s)	1139, 1557
BstFNI	CGCG	2 cut(s)	176, 200
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	2 cut(s)	176, 194
BstMAI	GTCTC	2 cut(s)	766, 1543
BstMWI	GCNNNNNNNGC	8 cut(s)	200, 206, 215, 255, 735, 914, 1046, 1250
BstNI	CCWGG	1 cut(s)	783
BstNSI	RCATGY	2 cut(s)	1109, 1533
BstSCI	CCNGG	2 cut(s)	781, 1564
BstSFI	CTRYAG	2 cut(s)	371, 1628
BstSLI	GKGCMC	1 cut(s)	307
BstSNI	TACGTA	1 cut(s)	1377
BstUI	CGCG	2 cut(s)	176, 200
BstV1I	GCAGC	1 cut(s)	920
BstV2I	GAAGAC	1 cut(s)	62
BstX2I	RGATCY	2 cut(s)	778, 1584
BstYI	RGATCY	2 cut(s)	778, 1584
BsuI	GTATCC	2 cut(s)	616, 1389
BsuRI	GGCC	4 cut(s)	51, 154, 203, 839
BtgI	CCRYGG	2 cut(s)	30, 198
BtgZI	GCGATG	3 cut(s)	70, 710, 1368
BtrI	CACGTC	1 cut(s)	760
BtsCI	GGATG	2 cut(s)	1139, 1557
BtsI	GCAGTG	1 cut(s)	383
BtsIMutI	CAGTG	4 cut(s)	383, 1301, 1338, 1478
Cac8I	GCNNGC	3 cut(s)	53, 977, 1431
CaiI	CAGNNNCTG	1 cut(s)	1547
CfoI	GCGC	2 cut(s)	176, 194
Cfr10I	RCCGGY	1 cut(s)	170
Cfr13I	GGNCC	4 cut(s)	49, 153, 202, 1418
Cfr42I	CCGCGG	1 cut(s)	201
CseI	GACGC	1 cut(s)	255
Csp6I	GTAC	1 cut(s)	23
CviAII	CATG	8 cut(s)	31, 206, 674, 822, 1106, 1272, 1333, 1530
CviQI	GTAC	1 cut(s)	23
DdeI	CTNAG	9 cut(s)	65, 515, 539, 1256, 1304, 1455, 1470, 1540, 1593
DinI	GGCGCC	1 cut(s)	193
DraI	TTTAAA	1 cut(s)	361
DriI	GACNNNNNGTC	1 cut(s)	66
EaeI	YGGCCR	1 cut(s)	837
Eam1104I	CTCTTC	2 cut(s)	409, 713
Eam1105I	GACNNNNNGTC	1 cut(s)	66
EarI	CTCTTC	2 cut(s)	409, 713
Eco105I	TACGTA	1 cut(s)	1377
Eco130I	CCWWGG	2 cut(s)	30, 618
Eco47I	GGWCC	1 cut(s)	1418
Eco57I	CTGAAG	4 cut(s)	338, 486, 628, 900
EcoRI	GAATTC	1 cut(s)	35
EcoRII	CCWGG	1 cut(s)	781
EcoT14I	CCWWGG	2 cut(s)	30, 618
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
ErhI	CCWWGG	2 cut(s)	30, 618
Esp3I	CGTCTC	1 cut(s)	766
FaeI	CATG	8 cut(s)	34, 209, 677, 825, 1109, 1275, 1336, 1533
FatI	CATG	8 cut(s)	30, 205, 673, 821, 1105, 1271, 1332, 1529
FauNDI	CATATG	2 cut(s)	667, 1447
FbaI	TGATCA	1 cut(s)	475
Fnu4HI	GCNGC	4 cut(s)	195, 198, 201, 909
FokI	GGATG	2 cut(s)	1146, 1564
Fsp4HI	GCNGC	4 cut(s)	195, 198, 201, 909
FspBI	CTAG	4 cut(s)	453, 966, 1064, 1598
GlaI	GCGC	2 cut(s)	175, 193
GluI	GCNGC	4 cut(s)	195, 198, 201, 909
GsuI	CTGGAG	2 cut(s)	61, 954
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	4 cut(s)	51, 154, 203, 839
HapII	CCGG	2 cut(s)	171, 1566
HgaI	GACGC	1 cut(s)	255
HhaI	GCGC	2 cut(s)	176, 194
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	8 cut(s)	34, 209, 677, 825, 1109, 1275, 1336, 1533
Hin6I	GCGC	2 cut(s)	174, 192
HinP1I	GCGC	2 cut(s)	174, 192
HincII	GTYRAC	2 cut(s)	1279, 1348
HindII	GTYRAC	2 cut(s)	1279, 1348
HindIII	AAGCTT	1 cut(s)	315
HinfI	GANTC	7 cut(s)	61, 349, 389, 456, 553, 888, 1451
HpaII	CCGG	2 cut(s)	171, 1566
HphI	GGTGA	5 cut(s)	120, 160, 451, 867, 1585
Hpy166II	GTNNAC	5 cut(s)	305, 521, 940, 1279, 1348
Hpy188I	TCNGA	8 cut(s)	388, 466, 480, 542, 1201, 1393, 1425, 1456
Hpy188III	TCNNGA	7 cut(s)	40, 123, 183, 453, 902, 933, 1416
Hpy8I	GTNNAC	5 cut(s)	305, 521, 940, 1279, 1348
Hpy99I	CGWCG	1 cut(s)	151
HpyAV	CCTTC	6 cut(s)	129, 461, 567, 1103, 1277, 1563
HpyCH4III	ACNGT	3 cut(s)	27, 628, 1342
HpyCH4IV	ACGT	3 cut(s)	759, 1352, 1376
HpyF10VI	GCNNNNNNNGC	8 cut(s)	200, 206, 215, 255, 735, 914, 1046, 1250
HpyF3I	CTNAG	9 cut(s)	65, 515, 539, 1256, 1304, 1455, 1470, 1540, 1593
HpySE526I	ACGT	3 cut(s)	759, 1352, 1376
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	8 cut(s)	34, 209, 677, 825, 1109, 1275, 1336, 1533
HspAI	GCGC	2 cut(s)	174, 192
KasI	GGCGCC	1 cut(s)	191
Ksp22I	TGATCA	1 cut(s)	475
KspI	CCGCGG	1 cut(s)	201
LguI	GCTCTTC	1 cut(s)	713
LmnI	GCTCC	2 cut(s)	922, 1169
Lsp1109I	GCAGC	1 cut(s)	920
LweI	GCATC	5 cut(s)	171, 895, 1416, 1553, 1566
MaeI	CTAG	4 cut(s)	453, 966, 1064, 1598
MaeII	ACGT	3 cut(s)	759, 1352, 1376
MaeIII	GTNAC	7 cut(s)	528, 574, 755, 873, 968, 1336, 1439
MbiI	CCGCTC	1 cut(s)	218
MboII	GAAGA	6 cut(s)	62, 304, 344, 396, 700, 1232
MflI	RGATCY	2 cut(s)	778, 1584
MhlI	GDGCHC	1 cut(s)	307
MlsI	TGGCCA	1 cut(s)	839
MluCI	AATT	9 cut(s)	35, 282, 420, 493, 692, 1035, 1110, 1149, 1320
MluNI	TGGCCA	1 cut(s)	839
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	2 cut(s)	55, 383
MmeI	TCCRAC	3 cut(s)	223, 411, 865
Mox20I	TGGCCA	1 cut(s)	839
MroXI	GAANNNNTTC	3 cut(s)	317, 641, 892
MscI	TGGCCA	1 cut(s)	839
MseI	TTAA	7 cut(s)	285, 360, 423, 653, 1034, 1460, 1611
MslI	CAYNNNNRTG	5 cut(s)	594, 678, 773, 1104, 1208
Msp20I	TGGCCA	1 cut(s)	839
MspA1I	CMGCKG	2 cut(s)	200, 310
MspI	CCGG	2 cut(s)	171, 1566
MspR9I	CCNGG	2 cut(s)	783, 1566
Mva1269I	GAATGC	1 cut(s)	1387
MvaI	CCWGG	1 cut(s)	783
MvnI	CGCG	2 cut(s)	176, 200
MwoI	GCNNNNNNNGC	8 cut(s)	200, 206, 215, 255, 735, 914, 1046, 1250
NarI	GGCGCC	1 cut(s)	192
NciI	CCSGG	1 cut(s)	1566
NcoI	CCATGG	1 cut(s)	30
NdeI	CATATG	2 cut(s)	667, 1447
NlaIII	CATG	8 cut(s)	34, 209, 677, 825, 1109, 1275, 1336, 1533
NlaIV	GGNNCC	5 cut(s)	89, 193, 780, 1100, 1171
NmuCI	GTSAC	5 cut(s)	574, 755, 873, 968, 1336
NspI	RCATGY	2 cut(s)	1109, 1533
PciI	ACATGT	1 cut(s)	1529
PciSI	GCTCTTC	1 cut(s)	713
PctI	GAATGC	1 cut(s)	1387
PdmI	GAANNNNTTC	3 cut(s)	317, 641, 892
PfeI	GAWTC	5 cut(s)	349, 456, 553, 888, 1451
PflFI	GACNNNGTC	1 cut(s)	1334
PfoI	TCCNGGA	1 cut(s)	1564
PkrI	GCNGC	4 cut(s)	196, 199, 202, 910
PleI	GAGTC	2 cut(s)	55, 383
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	2 cut(s)	55, 383
Ppu21I	YACGTR	1 cut(s)	1377
PscI	ACATGT	1 cut(s)	1529
Psp6I	CCWGG	1 cut(s)	781
PspGI	CCWGG	1 cut(s)	781
PspN4I	GGNNCC	5 cut(s)	89, 193, 780, 1100, 1171
PspPI	GGNCC	4 cut(s)	49, 153, 202, 1418
PstNI	CAGNNNCTG	1 cut(s)	1547
PsuI	RGATCY	2 cut(s)	778, 1584
PsyI	GACNNNGTC	1 cut(s)	1334
PvuII	CAGCTG	1 cut(s)	310
RsaI	GTAC	1 cut(s)	24
RsaNI	GTAC	1 cut(s)	23
RseI	CAYNNNNRTG	5 cut(s)	594, 678, 773, 1104, 1208
SacII	CCGCGG	1 cut(s)	201
SapI	GCTCTTC	1 cut(s)	713
SaqAI	TTAA	7 cut(s)	285, 360, 423, 653, 1034, 1460, 1611
SatI	GCNGC	4 cut(s)	195, 198, 201, 909
Sau96I	GGNCC	4 cut(s)	49, 153, 202, 1418
SchI	GAGTC	2 cut(s)	55, 383
ScrFI	CCNGG	2 cut(s)	783, 1566
SduI	GDGCHC	1 cut(s)	307
SfaNI	GCATC	5 cut(s)	171, 895, 1416, 1553, 1566
SfcI	CTRYAG	2 cut(s)	371, 1628
SfoI	GGCGCC	1 cut(s)	193
Sfr303I	CCGCGG	1 cut(s)	201
SgrAI	CRCCGGYG	1 cut(s)	170
SgrBI	CCGCGG	1 cut(s)	201
SinI	GGWCC	1 cut(s)	1418
SmiMI	CAYNNNNRTG	5 cut(s)	594, 678, 773, 1104, 1208
SmlI	CTYRAG	1 cut(s)	499
SmoI	CTYRAG	1 cut(s)	499
SnaBI	TACGTA	1 cut(s)	1377
SpeI	ACTAGT	1 cut(s)	965
Sse9I	AATT	9 cut(s)	35, 282, 420, 493, 692, 1035, 1110, 1149, 1320
SsiI	CCGC	6 cut(s)	131, 195, 198, 200, 216, 533
SspDI	GGCGCC	1 cut(s)	191
SspMI	CTAG	4 cut(s)	453, 966, 1064, 1598
StyD4I	CCNGG	2 cut(s)	781, 1564
StyI	CCWWGG	2 cut(s)	30, 618
TaaI	ACNGT	3 cut(s)	27, 628, 1342
TaiI	ACGT	3 cut(s)	762, 1355, 1379
TaqI	TCGA	8 cut(s)	104, 149, 321, 347, 407, 592, 602, 903
TaqII	GACCGA	1 cut(s)	1064
TasI	AATT	9 cut(s)	35, 282, 420, 493, 692, 1035, 1110, 1149, 1320
TatI	WGTACW	1 cut(s)	22
TauI	GCSGC	3 cut(s)	197, 200, 203
TfiI	GAWTC	5 cut(s)	349, 456, 553, 888, 1451
Tru1I	TTAA	7 cut(s)	285, 360, 423, 653, 1034, 1460, 1611
Tru9I	TTAA	7 cut(s)	285, 360, 423, 653, 1034, 1460, 1611
TscAI	CASTG	4 cut(s)	383, 1308, 1345, 1478
TseFI	GTSAC	5 cut(s)	574, 755, 873, 968, 1336
TseI	GCWGC	1 cut(s)	908
Tsp45I	GTSAC	5 cut(s)	574, 755, 873, 968, 1336
TspDTI	ATGAA	5 cut(s)	17, 713, 1111, 1147, 1345
TspGWI	ACGGA	4 cut(s)	135, 754, 1018, 1078
TspRI	CASTG	4 cut(s)	383, 1308, 1345, 1478
Tth111I	GACNNNGTC	1 cut(s)	1334
VneI	GTGCAC	1 cut(s)	303
VpaK11BI	GGWCC	1 cut(s)	1418
XapI	RAATTY	1 cut(s)	35
XbaI	TCTAGA	1 cut(s)	452
XceI	RCATGY	2 cut(s)	1109, 1533
XmnI	GAANNNNTTC	3 cut(s)	317, 641, 892
XspI	CTAG	4 cut(s)	453, 966, 1064, 1598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.