Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0003848

Physical Location & Seq

Genomic Coordinates Reverse (-)

49663303 .. 49668735

Gene Structure 5433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG359000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGCCCAGAGTGGAGGGAGCTCTAAACCCAGTCCCACAAATCGCCATAGAAAGCCGTCAGCAAGTTCTCTTCGACGCTCAGTCTCGGCTTCAATTCAAGAAATTTACAAGACGATGAAGGAGGCATTGGATTTTGTACTGTCCATGGAATTCTGGAGAATGGGCCTGCGATGGACTCTCAGTCTTCTCATCTCTTACTGGCACCTCCTCTTCGCCTCGACTACTACTCCTCCTTCCAGATCACCGGCTCCCTCATCTCCGTCGAGGCCCGTCTGCATCATCACCGGTGCGACTTCTGGATTGGGCGCCGCCGCGGCCCATGCTCTCTCCGCTCGTGGCTTCTTTGTGGTTCTCGTTGGACGCTCATCTCGCTTGTTAGAAAAGACGATGATGGAAATTAAGAGGAAGAATGAGAGTGCACAGCTGAAAGATTTCGAGGTTGATCTCTCATCATTCCAGTCGATTCTTCTGTTTAAAGCCTCCCTACAGCAGTGGCTTTCCGACTCGCAAATGCACTCTTCGATCCAACTCCTAATTAACAATGCTGGAATACTTGCTACGTCGTCTAGATTCACGTCTGAAGGCTATGATCAGATGATGGCTACAAATTACTTGAGTGCATTTTTTCTTAGTAAACTATTGTTACCGTTTCTCAGAAACAGCTCGATTCCTTCCCGTATAGTGAATGTCACATCTTTCACACATCGAAGTGTATCAAATATACAGGTTGACAAGGAGACTGTATCTGGGAAGTGCTTCAGCAGATTAAAAAGATACCCATATGCTCATGTATATGAGTATTCCAAATTGTTCCTACTGCTCTTCTCCTATGAGCTTCATCGCCAACTTGGCTTGATGGACATATCTCGTCATGTCTCCGTCCTTGCTGTGGATCCTGGTGTTGTTGAAACCAACATCTTGCGAGAAGTTCCTCCATGCCTATCCAGTTTGGCCGGTAAAGTTTTGAGAAGTCTTTGGCTCTTGCAGTCACCTGAAGTTGGAATCAGTTCCATTCTCGATGCAGCATTTGCTCCACCAGAAACATCTGGAGTTTACTTTTTTGGTGGAAAGGGCAACACTAGTCACAGCTTGCTTTCAAGGAAACCTCCACTTCTGTATCAAACTTTGTATCATAGGTTTAAGTCTCCACTGATCAGAGAAGCAATGTCAGGCCCTCAGTGCTGTTCTAACCCACCAATTATCAAGACAAGCTGTGGTTCAGACTCTGCTGAAAAATTTGGAGGCCTTACTGTCTATGTGACAGGATCTCCTAACTCCAAGCGTGCTATTCTTCTTATCTCTGATGTTTTTGGATATGGAGCTCCCAACTTGAGGAAGCTTGCACGAAGAGTTGCCACATCTGGATTCTATGTTGTAGTTCCAGACTTCTTCTATGGAGATGCGTTTGTGTATGACAATAACAGGCCTCTAGCAGTCTGGTTAAAAGATCATGGAACGGATAAGGGATTTGAAGATGCAAAATCAGTGATTGACGCTCTAATACGTCAAGGTTTTTCTGCAATTGGAGCTGCAGGCTTCTGTTGGGGTGGTGAGTGTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010506 GO:0010508 GO:0019222 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short

Protein Analysis

520

Amino Acids

57.25

Weight (kDa)

9.58

Isoelectric Point (pI)

53.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
adh_short	PF00106	91 - 234	2.1e-21	short chain dehydrogenase
adh_short_C2	PF13561	96 - 238	5.8e-12	Enoyl-(Acyl carrier protein) reductase
DLH	PF01738	418 - 519	2.2e-12	Dienelactone hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04070 AT5G15940 AT5G15940 AT5G15940 AT5G15940
fragaria_vesca	FvH4_6g28040 FvH4_6g28040
malus_domestica	MD15G1141600.v1.1
prunus_persica	Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1 Prupe.8G264400_v2.0.a1
pyrus_communis	pycom15g12790
rosa_chinensis	RchiOBHm_Chr2g0131741 RchiOBHm_Chr5g0041951 RchiOBHm_Chr6g0247031
rosa_laevigata	RLG00000015229 RLG00000019207
rosa_multiflora	Rmu_sc0006001.1_g000002 Rmu_sc0009880.1_g000012
rosa_roxburghii	Rroxscaffold_1G00038630 Rroxscaffold_2G00112660
rosa_rugosa	Rorug05G0197200 Rorug07G0258400
rosa_samantha	Rh2AG351900 Rh2BG359000 Rh5AG282000 Rh5BG287700 Rh5DG296500 Rh6BG031500
rosa_wichuraiana	Rw0G001410 Rw2G028590 Rw2G028600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	201, 305
AccBSI	CCGCTC	1 cut(s)	332
AccII	CGCG	1 cut(s)	314
AciI	CCGC	4 cut(s)	309, 312, 314, 330
AclWI	GGATC	4 cut(s)	517, 887, 900, 1273
AcoI	YGGCCR	1 cut(s)	951
AcsI	RAATTY	3 cut(s)	102, 149, 1235
AcuI	CTGAAG	3 cut(s)	600, 742, 1014
AcyI	GRCGYC	1 cut(s)	306
AfaI	GTAC	1 cut(s)	138
AfiI	CCNNNNNNNGG	3 cut(s)	889, 998, 1332
AgeI	ACCGGT	1 cut(s)	284
AgsI	TTSAA	5 cut(s)	93, 98, 908, 1098, 1472
AhdI	GACNNNNNGTC	2 cut(s)	80, 180
AhlI	ACTAGT	1 cut(s)	1079
AjiI	CACGTC	1 cut(s)	576
AjnI	CCWGG	1 cut(s)	895
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AluBI	AGCT	9 cut(s)	21, 424, 663, 835, 1089, 1212, 1322, 1339, 1529
AluI	AGCT	9 cut(s)	21, 424, 663, 835, 1089, 1212, 1322, 1339, 1529
Alw21I	GWGCWC	3 cut(s)	23, 421, 1324
Alw26I	GTCTC	4 cut(s)	88, 731, 880, 1149
Alw44I	GTGCAC	1 cut(s)	417
AlwI	GGATC	4 cut(s)	517, 887, 900, 1273
AlwNI	CAGNNNCTG	1 cut(s)	1226
AoxI	GGCC	8 cut(s)	3, 163, 266, 315, 951, 1171, 1243, 1424
ApaLI	GTGCAC	1 cut(s)	417
ApeKI	GCWGC	2 cut(s)	1022, 1529
ApoI	RAATTY	3 cut(s)	102, 149, 1235
AsiGI	ACCGGT	1 cut(s)	284
Asp700I	GAANNNNTTC	3 cut(s)	431, 755, 1006
AspLEI	GCGC	1 cut(s)	308
AspS9I	GGNCC	5 cut(s)	4, 163, 267, 316, 1172
AsuHPI	GGTGA	4 cut(s)	234, 274, 981, 1562
BaeGI	GKGCMC	1 cut(s)	421
BaeI	ACNNNNGTAYC	2 cut(s)	1100, 1133
BamHI	GGATCC	1 cut(s)	892
BanI	GGYRCC	2 cut(s)	201, 305
BanII	GRGCYC	2 cut(s)	23, 1324
BauI	CACGAG	1 cut(s)	333
BbsI	GAAGAC	1 cut(s)	176
Bbv12I	GWGCWC	3 cut(s)	23, 421, 1324
BbvI	GCAGC	2 cut(s)	1034, 1516
BccI	CCATC	4 cut(s)	165, 385, 592, 850
BceAI	ACGGC	1 cut(s)	40
BciT130I	CCWGG	1 cut(s)	897
BclI	TGATCA	2 cut(s)	589, 1152
BcoDI	GTCTC	4 cut(s)	88, 731, 880, 1149
BcuI	ACTAGT	1 cut(s)	1079
BfaI	CTAG	3 cut(s)	567, 1080, 1430
BfmI	CTRYAG	2 cut(s)	485, 1530
BfoI	RGCGCY	1 cut(s)	309
BglI	GCCNNNNNGGC	2 cut(s)	314, 849
BisI	GCNGC	5 cut(s)	309, 312, 315, 1023, 1530
BlsI	GCNGC	5 cut(s)	310, 313, 316, 1024, 1531
Bme1390I	CCNGG	1 cut(s)	897
BmeRI	GACNNNNNGTC	2 cut(s)	80, 180
BmgBI	CACGTC	1 cut(s)	576
BmgT120I	GGNCC	5 cut(s)	4, 163, 267, 316, 1172
BmiI	GGNNCC	4 cut(s)	203, 249, 307, 894
BmrFI	CCNGG	1 cut(s)	897
BmrI	ACTGGG	1 cut(s)	24
BmsI	GCATC	4 cut(s)	285, 1009, 1390, 1465
BmuI	ACTGGG	1 cut(s)	24
BpiI	GAAGAC	1 cut(s)	176
BpmI	CTGGAG	2 cut(s)	175, 1068
BpuEI	CTTGAG	2 cut(s)	634, 1351
BsaHI	GRCGYC	1 cut(s)	306
BsaJI	CCNNGG	2 cut(s)	144, 312
BsaWI	WCCGGW	1 cut(s)	284
BsaXI	ACNNNNNCTCC	6 cut(s)	211, 214, 241, 244, 1252, 1282
Bsc4I	CCNNNNNNNGG	3 cut(s)	889, 998, 1332
Bse118I	RCCGGY	3 cut(s)	244, 284, 953
Bse1I	ACTGG	4 cut(s)	30, 203, 457, 945
Bse3DI	GCAATG	1 cut(s)	1170
BseBI	CCWGG	1 cut(s)	897
BseDI	CCNNGG	2 cut(s)	144, 312
BseLI	CCNNNNNNNGG	3 cut(s)	889, 998, 1332
BseMI	GCAATG	1 cut(s)	1170
BseMII	CTCAG	4 cut(s)	93, 193, 667, 1190
BseNI	ACTGG	4 cut(s)	30, 203, 457, 945
BseRI	GAGGAG	2 cut(s)	197, 219
BseSI	GKGCMC	1 cut(s)	421
BseXI	GCAGC	2 cut(s)	1034, 1516
Bsh1236I	CGCG	1 cut(s)	314
BshFI	GGCC	8 cut(s)	5, 165, 268, 317, 953, 1173, 1245, 1426
BshNI	GGYRCC	2 cut(s)	201, 305
BshTI	ACCGGT	1 cut(s)	284
BsiHKAI	GWGCWC	3 cut(s)	23, 421, 1324
BsiSI	CCGG	3 cut(s)	245, 285, 954
BslFI	GGGAC	1 cut(s)	18
BslI	CCNNNNNNNGG	3 cut(s)	889, 998, 1332
BsmAI	GTCTC	4 cut(s)	88, 731, 880, 1149
BsmFI	GGGAC	1 cut(s)	18
BsnI	GGCC	8 cut(s)	5, 165, 268, 317, 953, 1173, 1245, 1426
Bsp1286I	GDGCHC	3 cut(s)	23, 421, 1324
Bsp143I	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
Bsp19I	CCATGG	1 cut(s)	144
BspACI	CCGC	4 cut(s)	309, 312, 314, 330
BspANI	GGCC	8 cut(s)	5, 165, 268, 317, 953, 1173, 1245, 1426
BspCNI	CTCAG	4 cut(s)	92, 192, 666, 1189
BspFNI	CGCG	1 cut(s)	314
BspLI	GGNNCC	4 cut(s)	203, 249, 307, 894
BspMAI	CTGCAG	1 cut(s)	1534
BspPI	GGATC	4 cut(s)	517, 887, 900, 1273
BspQI	GCTCTTC	1 cut(s)	827
BspT107I	GGYRCC	2 cut(s)	201, 305
BsrBI	CCGCTC	1 cut(s)	332
BsrDI	GCAATG	1 cut(s)	1170
BsrFI	RCCGGY	3 cut(s)	244, 284, 953
BsrI	ACTGG	4 cut(s)	30, 203, 457, 945
BssAI	RCCGGY	3 cut(s)	244, 284, 953
BssECI	CCNNGG	2 cut(s)	144, 312
BssMI	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
BssNI	GRCGYC	1 cut(s)	306
BssSI	CACGAG	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	144
Bst2BI	CACGAG	1 cut(s)	333
Bst2UI	CCWGG	1 cut(s)	897
Bst4CI	ACNGT	4 cut(s)	141, 648, 742, 1252
Bst6I	CTCTTC	5 cut(s)	75, 215, 523, 827, 1342
BstACI	GRCGYC	1 cut(s)	306
BstAPI	GCANNNNNTGC	1 cut(s)	1028
BstC8I	GCNNGC	5 cut(s)	167, 1091, 1284, 1341, 1534
BstDEI	CTNAG	5 cut(s)	79, 179, 629, 653, 1176
BstDSI	CCRYGG	2 cut(s)	144, 312
BstFNI	CGCG	1 cut(s)	314
BstH2I	RGCGCY	1 cut(s)	309
BstHHI	GCGC	1 cut(s)	308
BstKTI	GATC	8 cut(s)	242, 445, 525, 592, 895, 1155, 1268, 1450
BstMAI	GTCTC	4 cut(s)	88, 731, 880, 1149
BstMBI	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
BstMWI	GCNNNNNNNGC	8 cut(s)	314, 320, 329, 369, 849, 1028, 1179, 1526
BstNI	CCWGG	1 cut(s)	897
BstSCI	CCNGG	1 cut(s)	895
BstSFI	CTRYAG	2 cut(s)	485, 1530
BstSLI	GKGCMC	1 cut(s)	421
BstUI	CGCG	1 cut(s)	314
BstV1I	GCAGC	2 cut(s)	1034, 1516
BstV2I	GAAGAC	1 cut(s)	176
BstX2I	RGATCY	2 cut(s)	892, 1265
BstYI	RGATCY	2 cut(s)	892, 1265
BsuRI	GGCC	8 cut(s)	5, 165, 268, 317, 953, 1173, 1245, 1426
BtgI	CCRYGG	2 cut(s)	144, 312
BtgZI	GCGATG	2 cut(s)	184, 824
BtrI	CACGTC	1 cut(s)	576
BtsI	GCAGTG	1 cut(s)	497
BtsIMutI	CAGTG	4 cut(s)	497, 1148, 1184, 1491
Cac8I	GCNNGC	5 cut(s)	167, 1091, 1284, 1341, 1534
CaiI	CAGNNNCTG	1 cut(s)	1226
CfoI	GCGC	1 cut(s)	308
Cfr10I	RCCGGY	3 cut(s)	244, 284, 953
Cfr13I	GGNCC	5 cut(s)	4, 163, 267, 316, 1172
Cfr42I	CCGCGG	1 cut(s)	315
CseI	GACGC	3 cut(s)	84, 369, 1502
Csp6I	GTAC	1 cut(s)	137
CspAI	ACCGGT	1 cut(s)	284
CviAII	CATG	6 cut(s)	145, 320, 788, 872, 936, 1451
CviQI	GTAC	1 cut(s)	137
DdeI	CTNAG	5 cut(s)	79, 179, 629, 653, 1176
DinI	GGCGCC	1 cut(s)	307
DpnI	GATC	8 cut(s)	241, 444, 524, 591, 894, 1154, 1267, 1449
DpnII	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
DraI	TTTAAA	1 cut(s)	475
DriI	GACNNNNNGTC	2 cut(s)	80, 180
EaeI	YGGCCR	1 cut(s)	951
Eam1104I	CTCTTC	5 cut(s)	75, 215, 523, 827, 1342
Eam1105I	GACNNNNNGTC	2 cut(s)	80, 180
EarI	CTCTTC	5 cut(s)	75, 215, 523, 827, 1342
Ecl136II	GAGCTC	2 cut(s)	21, 1322
Eco130I	CCWWGG	1 cut(s)	144
Eco147I	AGGCCT	2 cut(s)	1245, 1426
Eco24I	GRGCYC	2 cut(s)	23, 1324
Eco53kI	GAGCTC	2 cut(s)	21, 1322
Eco57I	CTGAAG	3 cut(s)	600, 742, 1014
EcoICRI	GAGCTC	2 cut(s)	21, 1322
EcoO109I	RGGNCCY	1 cut(s)	1172
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	1 cut(s)	895
EcoT14I	CCWWGG	1 cut(s)	144
EcoT38I	GRGCYC	2 cut(s)	23, 1324
EgeI	GGCGCC	1 cut(s)	307
EheI	GGCGCC	1 cut(s)	307
ErhI	CCWWGG	1 cut(s)	144
FaeI	CATG	6 cut(s)	148, 323, 791, 875, 939, 1454
FaqI	GGGAC	1 cut(s)	18
FatI	CATG	6 cut(s)	144, 319, 787, 871, 935, 1450
FauNDI	CATATG	1 cut(s)	781
FbaI	TGATCA	2 cut(s)	589, 1152
Fnu4HI	GCNGC	5 cut(s)	309, 312, 315, 1023, 1530
FriOI	GRGCYC	2 cut(s)	23, 1324
Fsp4HI	GCNGC	5 cut(s)	309, 312, 315, 1023, 1530
FspBI	CTAG	3 cut(s)	567, 1080, 1430
GlaI	GCGC	1 cut(s)	307
GluI	GCNGC	5 cut(s)	309, 312, 315, 1023, 1530
GsuI	CTGGAG	2 cut(s)	175, 1068
HaeII	RGCGCY	1 cut(s)	309
HaeIII	GGCC	8 cut(s)	5, 165, 268, 317, 953, 1173, 1245, 1426
HapII	CCGG	3 cut(s)	245, 285, 954
HgaI	GACGC	3 cut(s)	84, 369, 1502
HhaI	GCGC	1 cut(s)	308
Hin1I	GRCGYC	1 cut(s)	306
Hin1II	CATG	6 cut(s)	148, 323, 791, 875, 939, 1454
Hin6I	GCGC	1 cut(s)	306
HinP1I	GCGC	1 cut(s)	306
HincII	GTYRAC	1 cut(s)	730
HindII	GTYRAC	1 cut(s)	730
HindIII	AAGCTT	1 cut(s)	1337
HinfI	GANTC	8 cut(s)	175, 463, 503, 570, 667, 1002, 1223, 1365
HpaII	CCGG	3 cut(s)	245, 285, 954
HphI	GGTGA	4 cut(s)	234, 274, 981, 1562
Hpy166II	GTNNAC	4 cut(s)	419, 635, 730, 1054
Hpy188I	TCNGA	7 cut(s)	502, 580, 594, 656, 1157, 1222, 1303
Hpy8I	GTNNAC	4 cut(s)	419, 635, 730, 1054
Hpy99I	CGWCG	3 cut(s)	78, 265, 565
HpyAV	CCTTC	4 cut(s)	112, 243, 575, 681
HpyCH4III	ACNGT	4 cut(s)	141, 648, 742, 1252
HpyCH4IV	ACGT	3 cut(s)	560, 575, 1504
HpyF10VI	GCNNNNNNNGC	8 cut(s)	314, 320, 329, 369, 849, 1028, 1179, 1526
HpyF3I	CTNAG	5 cut(s)	79, 179, 629, 653, 1176
HpySE526I	ACGT	3 cut(s)	560, 575, 1504
Hsp92I	GRCGYC	1 cut(s)	306
Hsp92II	CATG	6 cut(s)	148, 323, 791, 875, 939, 1454
HspAI	GCGC	1 cut(s)	306
KasI	GGCGCC	1 cut(s)	305
Ksp22I	TGATCA	2 cut(s)	589, 1152
KspI	CCGCGG	1 cut(s)	315
Kzo9I	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
LguI	GCTCTTC	1 cut(s)	827
LmnI	GCTCC	6 cut(s)	18, 253, 1036, 1319, 1327, 1526
Lsp1109I	GCAGC	2 cut(s)	1034, 1516
LweI	GCATC	4 cut(s)	285, 1009, 1390, 1465
MaeI	CTAG	3 cut(s)	567, 1080, 1430
MaeII	ACGT	3 cut(s)	560, 575, 1504
MaeIII	GTNAC	5 cut(s)	642, 688, 987, 1082, 1258
MalI	GATC	8 cut(s)	241, 444, 524, 591, 894, 1154, 1267, 1449
MbiI	CCGCTC	1 cut(s)	332
MboI	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
MfeI	CAATTG	1 cut(s)	1521
MflI	RGATCY	2 cut(s)	892, 1265
MhlI	GDGCHC	3 cut(s)	23, 421, 1324
Mly113I	GGCGCC	1 cut(s)	306
MlyI	GAGTC	3 cut(s)	169, 497, 1217
MmeI	TCCRAC	4 cut(s)	337, 525, 550, 979
MroXI	GAANNNNTTC	3 cut(s)	431, 755, 1006
MseI	TTAA	6 cut(s)	399, 474, 537, 767, 1140, 1442
MslI	CAYNNNNRTG	2 cut(s)	708, 792
MspA1I	CMGCKG	2 cut(s)	314, 424
MspI	CCGG	3 cut(s)	245, 285, 954
MspR9I	CCNGG	1 cut(s)	897
MunI	CAATTG	1 cut(s)	1521
MvaI	CCWGG	1 cut(s)	897
MvnI	CGCG	1 cut(s)	314
MwoI	GCNNNNNNNGC	8 cut(s)	314, 320, 329, 369, 849, 1028, 1179, 1526
NarI	GGCGCC	1 cut(s)	306
NcoI	CCATGG	1 cut(s)	144
NdeI	CATATG	1 cut(s)	781
NdeII	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
NlaIII	CATG	6 cut(s)	148, 323, 791, 875, 939, 1454
NlaIV	GGNNCC	4 cut(s)	203, 249, 307, 894
NmeAIII	GCCGAG	1 cut(s)	65
NmuCI	GTSAC	4 cut(s)	688, 987, 1082, 1258
PceI	AGGCCT	2 cut(s)	1245, 1426
PciSI	GCTCTTC	1 cut(s)	827
PdmI	GAANNNNTTC	3 cut(s)	431, 755, 1006
PfeI	GAWTC	5 cut(s)	463, 570, 667, 1002, 1365
PinAI	ACCGGT	1 cut(s)	284
PkrI	GCNGC	5 cut(s)	310, 313, 316, 1024, 1531
PleI	GAGTC	3 cut(s)	169, 497, 1217
PluTI	GGCGCC	1 cut(s)	309
PpsI	GAGTC	3 cut(s)	169, 497, 1217
Psp124BI	GAGCTC	2 cut(s)	23, 1324
Psp6I	CCWGG	1 cut(s)	895
PspGI	CCWGG	1 cut(s)	895
PspN4I	GGNNCC	4 cut(s)	203, 249, 307, 894
PspPI	GGNCC	5 cut(s)	4, 163, 267, 316, 1172
PstI	CTGCAG	1 cut(s)	1534
PstNI	CAGNNNCTG	1 cut(s)	1226
PsuI	RGATCY	2 cut(s)	892, 1265
PvuII	CAGCTG	1 cut(s)	424
RsaI	GTAC	1 cut(s)	138
RsaNI	GTAC	1 cut(s)	137
RseI	CAYNNNNRTG	2 cut(s)	708, 792
SacI	GAGCTC	2 cut(s)	23, 1324
SacII	CCGCGG	1 cut(s)	315
SapI	GCTCTTC	1 cut(s)	827
SaqAI	TTAA	6 cut(s)	399, 474, 537, 767, 1140, 1442
SatI	GCNGC	5 cut(s)	309, 312, 315, 1023, 1530
Sau3AI	GATC	8 cut(s)	239, 442, 522, 589, 892, 1152, 1265, 1447
Sau96I	GGNCC	5 cut(s)	4, 163, 267, 316, 1172
SchI	GAGTC	3 cut(s)	169, 497, 1217
ScrFI	CCNGG	1 cut(s)	897
SduI	GDGCHC	3 cut(s)	23, 421, 1324
SfaNI	GCATC	4 cut(s)	285, 1009, 1390, 1465
SfcI	CTRYAG	2 cut(s)	485, 1530
SfoI	GGCGCC	1 cut(s)	307
Sfr303I	CCGCGG	1 cut(s)	315
SgrAI	CRCCGGYG	1 cut(s)	284
SgrBI	CCGCGG	1 cut(s)	315
SmiMI	CAYNNNNRTG	2 cut(s)	708, 792
SmlI	CTYRAG	2 cut(s)	613, 1330
SmoI	CTYRAG	2 cut(s)	613, 1330
SpeI	ACTAGT	1 cut(s)	1079
SseBI	AGGCCT	2 cut(s)	1245, 1426
SsiI	CCGC	4 cut(s)	309, 312, 314, 330
SspDI	GGCGCC	1 cut(s)	305
SspMI	CTAG	3 cut(s)	567, 1080, 1430
SstI	GAGCTC	2 cut(s)	23, 1324
StuI	AGGCCT	2 cut(s)	1245, 1426
StyD4I	CCNGG	1 cut(s)	895
StyI	CCWWGG	1 cut(s)	144
TaaI	ACNGT	4 cut(s)	141, 648, 742, 1252
TaiI	ACGT	3 cut(s)	563, 578, 1507
TaqI	TCGA	9 cut(s)	73, 218, 263, 435, 461, 521, 665, 706, 1017
TatI	WGTACW	1 cut(s)	136
TauI	GCSGC	3 cut(s)	311, 314, 317
TfiI	GAWTC	5 cut(s)	463, 570, 667, 1002, 1365
Tru1I	TTAA	6 cut(s)	399, 474, 537, 767, 1140, 1442
Tru9I	TTAA	6 cut(s)	399, 474, 537, 767, 1140, 1442
TscAI	CASTG	4 cut(s)	497, 1155, 1184, 1491
TseFI	GTSAC	4 cut(s)	688, 987, 1082, 1258
TseI	GCWGC	2 cut(s)	1022, 1529
Tsp45I	GTSAC	4 cut(s)	688, 987, 1082, 1258
TspDTI	ATGAA	2 cut(s)	131, 827
TspGWI	ACGGA	3 cut(s)	249, 868, 1472
TspRI	CASTG	4 cut(s)	497, 1155, 1184, 1491
VneI	GTGCAC	1 cut(s)	417
XapI	RAATTY	3 cut(s)	102, 149, 1235
XbaI	TCTAGA	1 cut(s)	566
XmnI	GAANNNNTTC	3 cut(s)	431, 755, 1006
XspI	CTAG	3 cut(s)	567, 1080, 1430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.