Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017071.1

Orthogroup ID

OG0004310

Physical Location & Seq

Genomic Coordinates Reverse (-)

27778 .. 36674

Gene Structure 8897 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017071.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

atggcctcgtcctccagagcaaggagcagctcgccattctcgtaccgcaagccttcaagtccctactcctcgacctcctcctcctcctcgctgatcaacggccgcgctctcattccgcgctcctgctccagctcagcgacgtcgttttacaactccggaagtggactcggtccccgatccgccacgcccagccgctcccgctccgaatcaatgtaccaaggctcgcgatcctacggaggcgtctcgccggtggggttcgcggccgaggaccttatggccgagattgtggatgcgccgaggtctggggatagcatttcggtcacgattcggtttcggcctctcagcgagagggagtatcagagagggggtgaggtcacttggtatgcagatggtgataagattgtgcggaatgcgtacaatccagttacagcctatgcattcgataaagtttttggacaggatacgatttcgcaagaggtgtatgaggttgctgccaaacctgtggtcaaagctgccatggaaggtgtcaatggcactgtttttgcctatggtgtgacaagtagtgggaagacgcacactatgcatggagatcaaaacgctccaggtgttataccattggccataaaagatgtattcagtatgatccaagataccccaggaagagagtttttacttcgtgtctcgtatcttgagatctacaatgaggtgataaatgacttgcttgacccaacaggtcaaaatttgcgtgttcgagaagattcacagggtacatatgttgagggtataaaagaagaagttgttctgtctcccgggcatgcactttcgtttattgctgctggagaagagcaccgtcatgttggatcgaacaattataatttgttcagtagtagaagtcacaccatatttacactgatgattgaaagtagtgcccatggggatgaatatgatggagtgatcttctctcaacttaacttgattgatctagctggatcggagagctctaaaactgaaacaactggactaagaagaaaggaaggatcttacattaacaagagccttttaactcttggaactgtaattgggaagctgagtgagggaaaggcatcccatgttccatatcgagattctaagctcacccgccttttacaatcttcgctaagtgggcatggacatgtttcgctcatttgcacggttactcctgcatcaagtagcatggaggaaacccataatacattgaagtttgcaagcagagcaaagcgagtagagatctacgcatcacgtaataagattattgatgaaaagtctttaattaagaagtatcaaagagaaatttcagtccttaaagaagagcttgatcagctaaggaagggtatgcttgttggcatcagtcatgaggaaattatcactttaaagcagaagttggaagaaggccaagtcaaaatgcaatcaagattggaggaagaagaggaagcaaaggctgctcttatgagtagaatccagaggctgacgaagctcattcttgtttcatcaaaaaataccatacctggatgtttgagtgatattcccacccaccaacgacgttattctgttggtgaggatgataaaacggaagtagtgcgagatgggtccttgctagtagaaagtgagaaccaggactcaccttcttctgcctctggtgtcccatcagatctgtcttatgatattagacacaaaagatcttccagcaggtggaatgaagagctctcacctgctggcagtacaattacagaatcaactcaagctggggaacttatcagtggttcgaaactgacaacaggagggatgacaatgacagatcatatagacctgcttgtcgagcaagtaaagatgcttgctggagagatagcacttggcaccagtaccttgaagcgaatggtggagcagtctgtaaatgaccctgatagctccaaagttcaaattgagaacttggaacgtgatatccatgaaaagagaaggcaaatgagggttttagaacagcgcatcaatgaaagtggtgaggcttcagtctctaatgcatctttggttgagatgcagcagattgagaacttggaacgtgatatccatgaaaagagaaggcaaatgagggttttagaacagcgcatcaatgaaagtggtgaggcttcagtctctaatgcatctttggttgagatgcagcagacagttaagagactgatgacacagtgcgatgagaaggggtttgagttggaaataaaatcagcagacaatcgtattcttcaagagcaactgcaaaataagattgagaacttggaacgtgatatccatgaaaagagaaggcaaatgagggttttagaacagcgcatcaatgaaagtggtgaggcttcagtctctaatgcatctttggttgagatgcagcagacagttaagagactgatgacacagtgcgatgagaaggggtttgagttggaaataaaatcagcagacaatcgtattcttcaagagcaactgcaaaataagtgtgcagagaacttggaattgcaagaaaaagtgaatcagttagagcggcgcctagcttcagggttttccgagcacggtgtgtctgaagagtatgttgatgaattgagaaagaaaatccagtctcaggtgattgccgatctttcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031347 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0048583 GO:0050789 GO:0065007 GO:0080134

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin zf-C3HC4_3

Protein Analysis

886

Amino Acids

98.55

Weight (kDa)

5.74

Isoelectric Point (pI)

58.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21380 AT2G21380 AT4G39050
fragaria_vesca	FvH4_2g10080
malus_domestica	MD05G1058100.v1.1 MD10G1065900.v1.1
prunus_persica	Prupe.8G087800_v2.0.a1 Prupe.8G087800_v2.0.a1 Prupe.8G087800_v2.0.a1
pyrus_communis	pycom05g04920 pycom10g05130 pycom10g05140
rosa_chinensis	RchiOBHm_Chr6g0267011
rosa_laevigata	RLG00000014051 RLG00000027737 RLG00000037008
rosa_multiflora	Rmu_co8233357.1_g000001 Rmu_sc0013804.1_g000010 Rmu_sc0017071.1_g000008 Rmu_sc0037796.1_g000001 Rmu_sc0041080.1_g000001 Rmu_ssc0000341.1_g000028
rosa_roxburghii	Rroxscaffold_2G00112220 Rroxscaffold_7G00201230
rosa_rugosa	Rorug06G0028400 Rorug06G0028400 Rorug06G0028400
rosa_samantha	Rh1AG191400 Rh1CG176500 Rh6AG150000 Rh6CG146100
rosa_wichuraiana	Rw6G012990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	873
AarI	CACCTGC	2 cut(s)	1716, 1756
AasI	GACNNNNNNGTC	1 cut(s)	1850
AatII	GACGTC	1 cut(s)	143
Acc36I	ACCTGC	3 cut(s)	1716, 1756, 1854
AccB1I	GGYRCC	2 cut(s)	1892, 2562
AccB7I	CCANNNNNTGG	1 cut(s)	1728
AccBSI	CCGCTC	3 cut(s)	195, 201, 2560
AccII	CGCG	4 cut(s)	105, 118, 226, 260
AccIII	TCCGGA	1 cut(s)	155
AclWI	GGATC	6 cut(s)	171, 222, 637, 868, 997, 1045
AcoI	YGGCCR	4 cut(s)	100, 261, 276, 618
AcsI	RAATTY	2 cut(s)	739, 1329
AcuI	CTGAAG	5 cut(s)	2025, 2145, 2364, 2556, 2619
AcyI	GRCGYC	3 cut(s)	140, 240, 2563
AdeI	CACNNNGTG	1 cut(s)	2593
AfaI	GTAC	6 cut(s)	44, 215, 416, 769, 1759, 1900
AfiI	CCNNNNNNNGG	4 cut(s)	21, 302, 1728, 2638
AflIII	ACRYGT	1 cut(s)	1171
AgsI	TTSAA	7 cut(s)	57, 920, 1237, 1906, 1955, 2276, 2495
AjnI	CCWGG	4 cut(s)	601, 655, 1543, 1650
AloI	GAACNNNNNNTCC	6 cut(s)	1962, 1994, 2082, 2114, 2301, 2333
Alw21I	GWGCWC	4 cut(s)	849, 1001, 1743, 2589
Alw26I	GTCTC	9 cut(s)	247, 685, 810, 2050, 2170, 2200, 2389, 2419, 2640
AlwI	GGATC	6 cut(s)	171, 222, 637, 868, 997, 1045
AlwNI	CAGNNNCTG	1 cut(s)	1504
Ama87I	CYCGRG	1 cut(s)	809
Aor13HI	TCCGGA	1 cut(s)	155
AoxI	GGCC	7 cut(s)	3, 100, 261, 276, 335, 618, 1429
ApeKI	GCWGC	8 cut(s)	27, 491, 512, 833, 1478, 2071, 2191, 2410
ApoI	RAATTY	2 cut(s)	739, 1329
ArsI	GACNNNNNNTTYG	2 cut(s)	489, 521
Asp700I	GAANNNNTTC	1 cut(s)	798
AspLEI	GCGC	7 cut(s)	107, 120, 295, 2019, 2139, 2358, 2565
AspS9I	GGNCC	3 cut(s)	170, 268, 1626
AsuC2I	CCSGG	2 cut(s)	810, 811
AsuII	TTCGAA	1 cut(s)	1802
AvaI	CYCGRG	1 cut(s)	809
AvaII	GGWCC	3 cut(s)	170, 268, 1626
BaeGI	GKGCMC	1 cut(s)	931
BaeI	ACNNNNGTAYC	2 cut(s)	759, 792
BalI	TGGCCA	1 cut(s)	620
BanI	GGYRCC	2 cut(s)	1892, 2562
BanII	GRGCYC	2 cut(s)	1001, 1743
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	4 cut(s)	849, 1001, 1743, 2589
BbvI	GCAGC	8 cut(s)	39, 478, 499, 820, 1465, 2083, 2203, 2422
BccI	CCATC	4 cut(s)	383, 941, 1616, 1690
BceAI	ACGGC	1 cut(s)	115
BciT130I	CCWGG	4 cut(s)	603, 657, 1545, 1652
BciVI	GTATCC	1 cut(s)	454
BclI	TGATCA	2 cut(s)	93, 1354
BcnI	CCSGG	2 cut(s)	810, 811
BcoDI	GTCTC	9 cut(s)	247, 685, 810, 2050, 2170, 2200, 2389, 2419, 2640
BfaI	CTAG	3 cut(s)	983, 1634, 2567
BfoI	RGCGCY	1 cut(s)	2566
BfuAI	ACCTGC	3 cut(s)	1716, 1756, 1854
BfuI	GTATCC	1 cut(s)	454
BglII	AGATCT	4 cut(s)	693, 1266, 1687, 1715
BlpI	GCTNAGC	1 cut(s)	133
Bme1390I	CCNGG	6 cut(s)	603, 657, 810, 811, 1545, 1652
Bme18I	GGWCC	3 cut(s)	170, 268, 1626
BmeT110I	CYCGRG	1 cut(s)	809
BmgT120I	GGNCC	3 cut(s)	170, 268, 1626
BmiI	GGNNCC	4 cut(s)	172, 1627, 1894, 2564
BmrFI	CCNGG	6 cut(s)	603, 657, 810, 811, 1545, 1652
BpiI	GAAGAC	1 cut(s)	575
BpmI	CTGGAG	4 cut(s)	112, 585, 858, 1896
Bpu10I	CCTNAGC	1 cut(s)	1361
Bpu1102I	GCTNAGC	1 cut(s)	133
Bpu14I	TTCGAA	1 cut(s)	1802
BpuEI	CTTGAG	2 cut(s)	710, 1761
BpuMI	CCSGG	2 cut(s)	810, 811
BsaAI	YACGTR	1 cut(s)	1280
BsaHI	GRCGYC	3 cut(s)	140, 240, 2563
BsaJI	CCNNGG	7 cut(s)	217, 264, 296, 516, 655, 809, 931
BsaWI	WCCGGW	1 cut(s)	155
BsaXI	ACNNNNNCTCC	2 cut(s)	1180, 1210
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 302, 1728, 2638
Bse118I	RCCGGY	1 cut(s)	247
Bse1I	ACTGG	4 cut(s)	422, 1021, 1896, 2632
BseAI	TCCGGA	1 cut(s)	155
BseBI	CCWGG	4 cut(s)	603, 657, 1545, 1652
BseDI	CCNNGG	7 cut(s)	217, 264, 296, 516, 655, 809, 931
BseGI	GGATG	6 cut(s)	295, 943, 1103, 1553, 1603, 1827
BseLI	CCNNNNNNNGG	4 cut(s)	21, 302, 1728, 2638
BseMII	CTCAG	4 cut(s)	147, 355, 1079, 2651
BseNI	ACTGG	4 cut(s)	422, 1021, 1896, 2632
BseRI	GAGGAG	5 cut(s)	58, 67, 70, 73, 76
BseSI	GKGCMC	1 cut(s)	931
BseX3I	CGGCCG	2 cut(s)	100, 261
BseXI	GCAGC	8 cut(s)	39, 478, 499, 820, 1465, 2083, 2203, 2422
BseYI	CCCAGC	2 cut(s)	188, 1781
BsgI	GTGCAG	1 cut(s)	2538
Bsh1236I	CGCG	4 cut(s)	105, 118, 226, 260
Bsh1285I	CGRYCG	2 cut(s)	103, 264
BshFI	GGCC	7 cut(s)	5, 102, 263, 278, 337, 620, 1431
BshNI	GGYRCC	2 cut(s)	1892, 2562
BsiEI	CGRYCG	2 cut(s)	103, 264
BsiHKAI	GWGCWC	4 cut(s)	849, 1001, 1743, 2589
BsiHKCI	CYCGRG	1 cut(s)	809
BsiSI	CCGG	3 cut(s)	156, 248, 810
BslFI	GGGAC	3 cut(s)	45, 156, 1664
BslI	CCNNNNNNNGG	4 cut(s)	21, 302, 1728, 2638
BsmAI	GTCTC	9 cut(s)	247, 685, 810, 2050, 2170, 2200, 2389, 2419, 2640
BsmBI	CGTCTC	1 cut(s)	247
BsmFI	GGGAC	3 cut(s)	45, 156, 1664
BsmI	GAATGC	2 cut(s)	415, 437
BsnI	GGCC	7 cut(s)	5, 102, 263, 278, 337, 620, 1431
BsoBI	CYCGRG	1 cut(s)	809
Bsp119I	TTCGAA	1 cut(s)	1802
Bsp1286I	GDGCHC	5 cut(s)	849, 931, 1001, 1743, 2589
Bsp13I	TCCGGA	1 cut(s)	155
Bsp1720I	GCTNAGC	1 cut(s)	133
Bsp19I	CCATGG	2 cut(s)	516, 931
Bsp68I	TCGCGA	1 cut(s)	226
BspANI	GGCC	7 cut(s)	5, 102, 263, 278, 337, 620, 1431
BspCNI	CTCAG	4 cut(s)	146, 354, 1080, 2650
BspEI	TCCGGA	1 cut(s)	155
BspFNI	CGCG	4 cut(s)	105, 118, 226, 260
BspHI	TCATGA	1 cut(s)	1390
BspLI	GGNNCC	4 cut(s)	172, 1627, 1894, 2564
BspMI	ACCTGC	3 cut(s)	1716, 1756, 1854
BspPI	GGATC	6 cut(s)	171, 222, 637, 868, 997, 1045
BspQI	GCTCTTC	3 cut(s)	837, 1341, 1731
BspT104I	TTCGAA	1 cut(s)	1802
BspT107I	GGYRCC	2 cut(s)	1892, 2562
BsrBI	CCGCTC	3 cut(s)	195, 201, 2560
BsrFI	RCCGGY	1 cut(s)	247
BsrI	ACTGG	4 cut(s)	422, 1021, 1896, 2632
BssAI	RCCGGY	1 cut(s)	247
BssECI	CCNNGG	7 cut(s)	217, 264, 296, 516, 655, 809, 931
BssNI	GRCGYC	3 cut(s)	140, 240, 2563
BssT1I	CCWWGG	3 cut(s)	217, 516, 931
Bst2UI	CCWGG	4 cut(s)	603, 657, 1545, 1652
Bst4CI	ACNGT	9 cut(s)	538, 851, 1075, 1192, 2200, 2220, 2419, 2439, 2591
Bst6I	CTCTTC	6 cut(s)	655, 837, 1341, 1458, 1731, 2595
BstACI	GRCGYC	3 cut(s)	140, 240, 2563
BstAPI	GCANNNNNTGC	2 cut(s)	580, 1478
BstBAI	YACGTR	1 cut(s)	1280
BstBI	TTCGAA	1 cut(s)	1802
BstC8I	GCNNGC	7 cut(s)	32, 50, 224, 816, 1246, 1753, 1872
BstDEI	CTNAG	9 cut(s)	133, 341, 1022, 1088, 1128, 1157, 1361, 2637, 2658
BstDSI	CCRYGG	2 cut(s)	516, 931
BstF5I	GGATG	6 cut(s)	295, 943, 1103, 1553, 1603, 1827
BstFNI	CGCG	4 cut(s)	105, 118, 226, 260
BstH2I	RGCGCY	1 cut(s)	2566
BstHHI	GCGC	7 cut(s)	107, 120, 295, 2019, 2139, 2358, 2565
BstMAI	GTCTC	9 cut(s)	247, 685, 810, 2050, 2170, 2200, 2389, 2419, 2640
BstMCI	CGRYCG	2 cut(s)	103, 264
BstMWI	GCNNNNNNNGC	8 cut(s)	198, 580, 1162, 1250, 1357, 1478, 1510, 1855
BstNI	CCWGG	4 cut(s)	603, 657, 1545, 1652
BstNSI	RCATGY	2 cut(s)	818, 1175
BstSCI	CCNGG	6 cut(s)	601, 655, 808, 809, 1543, 1650
BstSLI	GKGCMC	1 cut(s)	931
BstUI	CGCG	4 cut(s)	105, 118, 226, 260
BstV1I	GCAGC	8 cut(s)	39, 478, 499, 820, 1465, 2083, 2203, 2422
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	5 cut(s)	693, 1037, 1266, 1687, 1715
BstXI	CCANNNNNNTGG	1 cut(s)	502
BstYI	RGATCY	5 cut(s)	693, 1037, 1266, 1687, 1715
BstZI	CGGCCG	2 cut(s)	100, 261
BsuI	GTATCC	1 cut(s)	454
BsuRI	GGCC	7 cut(s)	5, 102, 263, 278, 337, 620, 1431
BtgI	CCRYGG	2 cut(s)	516, 931
BtgZI	GCGATG	2 cut(s)	2238, 2457
BtsCI	GGATG	6 cut(s)	295, 943, 1103, 1553, 1603, 1827
BtsIMutI	CAGTG	5 cut(s)	534, 908, 1801, 2225, 2444
BtuMI	TCGCGA	1 cut(s)	226
BveI	ACCTGC	3 cut(s)	1716, 1756, 1854
Cac8I	GCNNGC	7 cut(s)	32, 50, 224, 816, 1246, 1753, 1872
CaiI	CAGNNNCTG	1 cut(s)	1504
CciI	TCATGA	1 cut(s)	1390
CfoI	GCGC	7 cut(s)	107, 120, 295, 2019, 2139, 2358, 2565
Cfr10I	RCCGGY	1 cut(s)	247
Cfr13I	GGNCC	3 cut(s)	170, 268, 1626
Cfr9I	CCCGGG	1 cut(s)	809
CseI	GACGC	2 cut(s)	229, 580
Csp6I	GTAC	6 cut(s)	43, 214, 415, 768, 1758, 1899
CspCI	CAANNNNNGTGG	6 cut(s)	2011, 2046, 2131, 2166, 2350, 2385
CviQI	GTAC	6 cut(s)	43, 214, 415, 768, 1758, 1899
DdeI	CTNAG	9 cut(s)	133, 341, 1022, 1088, 1128, 1157, 1361, 2637, 2658
DinI	GGCGCC	1 cut(s)	2564
DraI	TTTAAA	1 cut(s)	1410
DraIII	CACNNNGTG	1 cut(s)	2593
DrdI	GACNNNNNNGTC	1 cut(s)	1850
DseDI	GACNNNNNNGTC	1 cut(s)	1850
EaeI	YGGCCR	4 cut(s)	100, 261, 276, 618
EagI	CGGCCG	2 cut(s)	100, 261
Eam1104I	CTCTTC	6 cut(s)	655, 837, 1341, 1458, 1731, 2595
EarI	CTCTTC	6 cut(s)	655, 837, 1341, 1458, 1731, 2595
EciI	GGCGGA	1 cut(s)	169
Ecl136II	GAGCTC	2 cut(s)	999, 1741
EclXI	CGGCCG	2 cut(s)	100, 261
Eco130I	CCWWGG	3 cut(s)	217, 516, 931
Eco24I	GRGCYC	2 cut(s)	1001, 1743
Eco32I	GATATC	3 cut(s)	1978, 2098, 2317
Eco47I	GGWCC	3 cut(s)	170, 268, 1626
Eco52I	CGGCCG	2 cut(s)	100, 261
Eco53kI	GAGCTC	2 cut(s)	999, 1741
Eco57I	CTGAAG	5 cut(s)	2025, 2145, 2364, 2556, 2619
Eco88I	CYCGRG	1 cut(s)	809
EcoICRI	GAGCTC	2 cut(s)	999, 1741
EcoO109I	RGGNCCY	2 cut(s)	268, 1626
EcoRII	CCWGG	4 cut(s)	601, 655, 1543, 1650
EcoRV	GATATC	3 cut(s)	1978, 2098, 2317
EcoT14I	CCWWGG	3 cut(s)	217, 516, 931
EcoT22I	ATGCAT	5 cut(s)	439, 585, 2056, 2176, 2395
EcoT38I	GRGCYC	2 cut(s)	1001, 1743
EgeI	GGCGCC	1 cut(s)	2564
EheI	GGCGCC	1 cut(s)	2564
ErhI	CCWWGG	3 cut(s)	217, 516, 931
Esp3I	CGTCTC	1 cut(s)	247
FalI	AAGNNNNNCTT	2 cut(s)	1335, 1367
FaqI	GGGAC	3 cut(s)	45, 156, 1664
FauI	CCCGC	2 cut(s)	206, 1145
FauNDI	CATATG	1 cut(s)	772
FbaI	TGATCA	2 cut(s)	93, 1354
FokI	GGATG	6 cut(s)	302, 950, 1090, 1560, 1610, 1834
FriOI	GRGCYC	2 cut(s)	1001, 1743
FspBI	CTAG	3 cut(s)	983, 1634, 2567
GlaI	GCGC	7 cut(s)	106, 119, 294, 2018, 2138, 2357, 2564
GsaI	CCCAGC	2 cut(s)	192, 1785
GsuI	CTGGAG	4 cut(s)	112, 585, 858, 1896
HaeII	RGCGCY	1 cut(s)	2566
HaeIII	GGCC	7 cut(s)	5, 102, 263, 278, 337, 620, 1431
HapII	CCGG	3 cut(s)	156, 248, 810
HgaI	GACGC	2 cut(s)	229, 580
HhaI	GCGC	7 cut(s)	107, 120, 295, 2019, 2139, 2358, 2565
Hin1I	GRCGYC	3 cut(s)	140, 240, 2563
Hin6I	GCGC	7 cut(s)	105, 118, 293, 2017, 2137, 2356, 2563
HinP1I	GCGC	7 cut(s)	105, 118, 293, 2017, 2137, 2356, 2563
HinfI	GANTC	9 cut(s)	165, 206, 325, 758, 1124, 1494, 1655, 1769, 2548
HpaII	CCGG	3 cut(s)	156, 248, 810
Hpy166II	GTNNAC	1 cut(s)	164
Hpy188I	TCNGA	6 cut(s)	205, 360, 994, 1687, 2584, 2599
Hpy8I	GTNNAC	1 cut(s)	164
Hpy99I	CGWCG	3 cut(s)	142, 145, 1581
HpyCH4III	ACNGT	9 cut(s)	538, 851, 1075, 1192, 2200, 2220, 2419, 2439, 2591
HpyCH4IV	ACGT	6 cut(s)	140, 1279, 1579, 1972, 2092, 2311
HpyF10VI	GCNNNNNNNGC	8 cut(s)	198, 580, 1162, 1250, 1357, 1478, 1510, 1855
HpyF3I	CTNAG	9 cut(s)	133, 341, 1022, 1088, 1128, 1157, 1361, 2637, 2658
HpySE526I	ACGT	6 cut(s)	140, 1279, 1579, 1972, 2092, 2311
Hsp92I	GRCGYC	3 cut(s)	140, 240, 2563
HspAI	GCGC	7 cut(s)	105, 118, 293, 2017, 2137, 2356, 2563
KasI	GGCGCC	1 cut(s)	2562
Kpn2I	TCCGGA	1 cut(s)	155
Ksp22I	TGATCA	2 cut(s)	93, 1354
LguI	GCTCTTC	3 cut(s)	837, 1341, 1731
LmnI	GCTCC	8 cut(s)	24, 125, 131, 200, 206, 604, 1918, 1949
Lsp1109I	GCAGC	8 cut(s)	39, 478, 499, 820, 1465, 2083, 2203, 2422
MaeI	CTAG	3 cut(s)	983, 1634, 2567
MaeII	ACGT	6 cut(s)	140, 1279, 1579, 1972, 2092, 2311
MaeIII	GTNAC	6 cut(s)	319, 373, 424, 553, 893, 1192
MbiI	CCGCTC	3 cut(s)	195, 201, 2560
MflI	RGATCY	5 cut(s)	693, 1037, 1266, 1687, 1715
MhlI	GDGCHC	5 cut(s)	849, 931, 1001, 1743, 2589
MlsI	TGGCCA	1 cut(s)	620
MluNI	TGGCCA	1 cut(s)	620
Mly113I	GGCGCC	1 cut(s)	2563
MlyI	GAGTC	2 cut(s)	159, 1649
MmeI	TCCRAC	4 cut(s)	838, 1401, 2223, 2442
Mox20I	TGGCCA	1 cut(s)	620
Mph1103I	ATGCAT	5 cut(s)	439, 585, 2056, 2176, 2395
MroI	TCCGGA	1 cut(s)	155
MroXI	GAANNNNTTC	1 cut(s)	798
MscI	TGGCCA	1 cut(s)	620
MseI	TTAA	9 cut(s)	969, 1047, 1061, 1307, 1311, 1341, 1409, 2202, 2421
MslI	CAYNNNNRTG	3 cut(s)	852, 936, 1170
Msp20I	TGGCCA	1 cut(s)	620
MspI	CCGG	3 cut(s)	156, 248, 810
MspR9I	CCNGG	6 cut(s)	603, 657, 810, 811, 1545, 1652
Mva1269I	GAATGC	2 cut(s)	415, 437
MvaI	CCWGG	4 cut(s)	603, 657, 1545, 1652
MvnI	CGCG	4 cut(s)	105, 118, 226, 260
MwoI	GCNNNNNNNGC	8 cut(s)	198, 580, 1162, 1250, 1357, 1478, 1510, 1855
NarI	GGCGCC	1 cut(s)	2563
NciI	CCSGG	2 cut(s)	810, 811
NcoI	CCATGG	2 cut(s)	516, 931
NdeI	CATATG	1 cut(s)	772
NlaIV	GGNNCC	4 cut(s)	172, 1627, 1894, 2564
NmeAIII	GCCGAG	3 cut(s)	289, 304, 321
NmuCI	GTSAC	4 cut(s)	319, 373, 553, 893
NruI	TCGCGA	1 cut(s)	226
NsiI	ATGCAT	5 cut(s)	439, 585, 2056, 2176, 2395
NspI	RCATGY	2 cut(s)	818, 1175
NspV	TTCGAA	1 cut(s)	1802
PacI	TTAATTAA	1 cut(s)	1311
PaeI	GCATGC	1 cut(s)	818
PagI	TCATGA	1 cut(s)	1390
PaqCI	CACCTGC	2 cut(s)	1716, 1756
PciI	ACATGT	1 cut(s)	1171
PciSI	GCTCTTC	3 cut(s)	837, 1341, 1731
PcsI	WCGNNNNNNNCGW	1 cut(s)	38
PctI	GAATGC	2 cut(s)	415, 437
PdmI	GAANNNNTTC	1 cut(s)	798
PfeI	GAWTC	7 cut(s)	206, 325, 758, 1124, 1494, 1769, 2548
PflFI	GACNNNGTC	1 cut(s)	168
PflMI	CCANNNNNTGG	1 cut(s)	1728
PleI	GAGTC	2 cut(s)	159, 1649
PluTI	GGCGCC	1 cut(s)	2566
PpsI	GAGTC	2 cut(s)	159, 1649
Ppu21I	YACGTR	1 cut(s)	1280
PpuMI	RGGWCCY	2 cut(s)	268, 1626
PscI	ACATGT	1 cut(s)	1171
PsiI	TTATAA	1 cut(s)	873
Psp124BI	GAGCTC	2 cut(s)	1001, 1743
Psp5II	RGGWCCY	2 cut(s)	268, 1626
Psp6I	CCWGG	4 cut(s)	601, 655, 1543, 1650
PspFI	CCCAGC	2 cut(s)	188, 1781
PspGI	CCWGG	4 cut(s)	601, 655, 1543, 1650
PspN4I	GGNNCC	4 cut(s)	172, 1627, 1894, 2564
PspPI	GGNCC	3 cut(s)	170, 268, 1626
PspPPI	RGGWCCY	2 cut(s)	268, 1626
PstNI	CAGNNNCTG	1 cut(s)	1504
PsuI	RGATCY	5 cut(s)	693, 1037, 1266, 1687, 1715
PsyI	GACNNNGTC	1 cut(s)	168
RruI	TCGCGA	1 cut(s)	226
RsaI	GTAC	6 cut(s)	44, 215, 416, 769, 1759, 1900
RsaNI	GTAC	6 cut(s)	43, 214, 415, 768, 1758, 1899
RseI	CAYNNNNRTG	3 cut(s)	852, 936, 1170
SacI	GAGCTC	2 cut(s)	1001, 1743
SapI	GCTCTTC	3 cut(s)	837, 1341, 1731
SaqAI	TTAA	9 cut(s)	969, 1047, 1061, 1307, 1311, 1341, 1409, 2202, 2421
Sau96I	GGNCC	3 cut(s)	170, 268, 1626
SchI	GAGTC	2 cut(s)	159, 1649
ScrFI	CCNGG	6 cut(s)	603, 657, 810, 811, 1545, 1652
SduI	GDGCHC	5 cut(s)	849, 931, 1001, 1743, 2589
SfoI	GGCGCC	1 cut(s)	2564
SfuI	TTCGAA	1 cut(s)	1802
SgrAI	CRCCGGYG	1 cut(s)	247
SinI	GGWCC	3 cut(s)	170, 268, 1626
SmaI	CCCGGG	1 cut(s)	811
SmiMI	CAYNNNNRTG	3 cut(s)	852, 936, 1170
SmlI	CTYRAG	2 cut(s)	689, 1776
SmoI	CTYRAG	2 cut(s)	689, 1776
SphI	GCATGC	1 cut(s)	818
SspDI	GGCGCC	1 cut(s)	2562
SspMI	CTAG	3 cut(s)	983, 1634, 2567
SstI	GAGCTC	2 cut(s)	1001, 1743
StyD4I	CCNGG	6 cut(s)	601, 655, 808, 809, 1543, 1650
StyI	CCWWGG	3 cut(s)	217, 516, 931
TaaI	ACNGT	9 cut(s)	538, 851, 1075, 1192, 2200, 2220, 2419, 2439, 2591
TaiI	ACGT	6 cut(s)	143, 1282, 1582, 1975, 2095, 2314
TaqI	TCGA	7 cut(s)	71, 441, 751, 863, 1120, 1802, 1854
TaqII	GACCGA	2 cut(s)	158, 307
TatI	WGTACW	1 cut(s)	1757
TauI	GCSGC	4 cut(s)	105, 195, 263, 2563
TfiI	GAWTC	7 cut(s)	206, 325, 758, 1124, 1494, 1769, 2548
Tru1I	TTAA	9 cut(s)	969, 1047, 1061, 1307, 1311, 1341, 1409, 2202, 2421
Tru9I	TTAA	9 cut(s)	969, 1047, 1061, 1307, 1311, 1341, 1409, 2202, 2421
TscAI	CASTG	5 cut(s)	541, 915, 1801, 2225, 2444
TseFI	GTSAC	4 cut(s)	319, 373, 553, 893
TseI	GCWGC	8 cut(s)	27, 491, 512, 833, 1478, 2071, 2191, 2410
Tsp45I	GTSAC	4 cut(s)	319, 373, 553, 893
TspGWI	ACGGA	2 cut(s)	249, 1622
TspMI	CCCGGG	1 cut(s)	809
TspRI	CASTG	5 cut(s)	541, 915, 1801, 2225, 2444
Tth111I	GACNNNGTC	1 cut(s)	168
Van91I	CCANNNNNTGG	1 cut(s)	1728
VpaK11BI	GGWCC	3 cut(s)	170, 268, 1626
XapI	RAATTY	2 cut(s)	739, 1329
XceI	RCATGY	2 cut(s)	818, 1175
XmaI	CCCGGG	1 cut(s)	809
XmnI	GAANNNNTTC	1 cut(s)	798
XspI	CTAG	3 cut(s)	983, 1634, 2567
ZraI	GACGTC	1 cut(s)	141
Zsp2I	ATGCAT	5 cut(s)	439, 585, 2056, 2176, 2395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.