Rmu_ssc0000267.1_g000017

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000267.1
OG0003524
Physical Location & Seq
Forward (+)
52388 .. 62568
10181 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3486 bp
atgccccaactggtttttcggtcctcgagtctgtcgtcgaggtatttacaagtgtcaggagagcacgtctatgatgacaaaagctcccttccacaaaatcatcatgggccccaaaaagcaaagagtccgagcagatccacctaccagggcccacacattcaaccgttgaaacgtgcaggacgttttcaaaaaatcatgaagtgcaggctggacggatcacctctgcgcctccatcatggtccctgccctcgcaggcattcatcccacaggctagagggtaaaccccgtgtcaattctcaacgccctttctttcccaaatttccagagttggctttggaagggaaagaaacggcgacaaggttttccgaggacggcgatcatcgaaaaaaaatgagcgcggtttcgggtgtagtgtctcgccaagttttgcctgcttgcggcagtctctgtttcttttgccccgggctgcgcgccaggtcccggcagcccgtcaagaggtacaagaagctcattgctgatattttccccaaaaaccaggaagaaggaccaaatgatcggaagataggaaaattgtgtgaatatgctgctaaaaatcctttgcggattccaaagatcacaacctctcttgagcaaaggtgttacaaagaattgagaaatgagaattttcgatccacaaaaattgtcatgtgcatttacaagaaattgctgataacttgcaaggagcaaatgcctctctttgcgagtagcttgctcagcattatgcatacccttctggatcaatcacgccaagatgaaatgcaaattataggatgccagactctttttgactttgtaaataatcaggtggatggaacatacatgtttaacttagaaggatttattccgaaactctgtcagatagctcaagagccaggggaagatgaaagggcaaataatttacattgtgctgcactgcaagccctttcttcaatggtttggtttatgggcgagaattctcacatatcagtcgagttcgataatattgttgcagtggtcttggaaaactatggaggttttaaggaagctgaaggttcgcagattcagtgggtgcaggaagttcaaaaagatgagggtcatgtttctccacaagatgtcagaatcaggattcctccttggagtgccattgtggatgccaaaggcgaactaaaagtatcagaggaagatgccaagaacctctgtttttggtccagggtttgccttcataacatggcaaagttagccaaagaggctacaacaataagacgtgtcctggaatctttgttccgctactttgataacgaaaacttgtggtctcttgaacatgggcttgccatctcagtcttaaaggatatacaattcttaatagataaatctgggcaaaatacccatgttttgctatccatcttaatcaagcatctcgaccacaaaaatgtccttaaacaacccaacatgcagcttgacatagtggaggtaactacctccctcgctctacatgccaaggttgaaccttctgtagcaataattggggctttaagtgatgccttgaggcatttgagaaagagcatccactgctctctggatgatgccaatctcgggacagatgtcatcaaatggaacaaatgctttagagaagaggtggataagtgccttgtacagctatcatataagatcggagaaccaggaccaattcttgatgctatggctgttatgctggagaatatttcaactattacagtgatagccagaactacaattgctgctatttatcgtactgctcaaattgtagcttccttaccaaatttgtcctatcaaaacaaggctttcccggaggcattgtttcaccaattactcccagctatggttcatccagaccatgaaacacgtgttggagctcatcgcatcttctctgttgttcttgtgccatcttcagtttcacctaatctattctcatctaataccgagacaaaaaaggcctttgatcttcacaggacactctcaagaactgtctctgtgttttcttcttcagctgccctttttgagaagctgaggagagaaaaaatttcctcacgggaaagtatttgtgaagaagatgaaaacattgttccggagggggaagaaagagacaccaataatgggtttctgagcagattgaagtcatcttatagtcggacatatagtatgaaaagcttgcctgcaccttcaacaccaaatgaaaattccatgagcaataatactaaggaacttgaggctaattccctcaggttgagcagccaccagataactctcttgcttttatcaatttcggcacaatccatctctcctgggaacatgcctgaaaactatgaagcaattgctcatacctacagccttgtattactcttctctcgggccaagaactcctgcattgaggttcttgttcgaagttttcagctggcattttccttacgaaatatttctcttattgaaggagggccattgccaccttcacgtcgcaggtccctgtttaccctggcaacttcaatgattctatttttatcaaaagcatacaattttttctctctggttgatagagtcaaggcagcactgacggataaaaaggttgatccgttcctacatttggttgaagagtacaagttacaggctgttaaggctggacctgaccatcccacatatctctatggatccaaggaagatgacaatttggcattaaaatctctgtcacaaatagtgattactgaagagcagagtagggaatcatttgcttctgcaattgtgaagagcttggacaatttgtcagaatctgaattgtcttctataaaggaggagttgctcaatgatttcatacctgatgatatctgtccactaggagcacaattgttcacggaagctccgaaaaaactttatcaggttgatttcacaaatagcgaatctattaaggaggatgctccattattttcaatggaagatgattctgttccaggctcatctaatagccaccagaacagtgtagagttgtctatggatcttcccattcttttgaatgttaatcaactaatggaatcggtccaggagacagcaaatcaagttggaaggttttcagtctcaactaaacctgatgtatcttacaaggaaatggccggccactgtgaggcacttctgctaggaaagcagcagaagatgtccaagttcatgagttctcaaaagaaagaggaatgtttgatgaacttctctttacaaaatcataatgacgacctgcaagaaacaacgcccgattcttatattggcgtgggttcccataggagcggtaatgcttttgctgaccacactgccacttcatacaaactaccgccaaccccaggccatgtcccaatgctttgtgcagcggaataccagcataatccccactcctccttcagactaccagcctcaaatccatatgataacttcctaaaagctgccggttgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1161

Amino Acids

130.26

Weight (kDa)

7.39

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 199 - 288 3.9e-17 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2502, 3279
AccBSI CCGCTC 1 cut(s) 3321
AccII CGCG 2 cut(s) 398, 471
AccIII TCCGGA 1 cut(s) 2122
AciI CCGC 7 cut(s) 398, 438, 601, 1303, 3321, 3365, 3401
AclWI GGATC 8 cut(s) 129, 223, 663, 783, 2615, 2694, 2707, 3048
AcoI YGGCCR 2 cut(s) 3153, 3157
AcsI RAATTY 6 cut(s) 317, 661, 991, 1816, 2076, 2233
AcuI CTGAAG 5 cut(s) 1086, 1929, 2025, 2775, 3415
AcvI CACGTG 1 cut(s) 1901
AfaI GTAC 4 cut(s) 500, 1671, 1789, 2648
AfiI CCNNNNNNNGG 9 cut(s) 437, 480, 495, 1611, 1876, 2151, 2635, 3166, 3374
AflIII ACRYGT 4 cut(s) 858, 1282, 1898, 1900
AhdI GACNNNNNGTC 1 cut(s) 2809
AjiI CACGTC 3 cut(s) 67, 1283, 2507
AjuI GAANNNNNNNTTGG 5 cut(s) 32, 1887, 1919, 2218, 2250
AloI GAACNNNNNNTCC 2 cut(s) 1283, 1315
Alw21I GWGCWC 3 cut(s) 66, 1912, 2890
Alw26I GTCTC 8 cut(s) 420, 449, 1335, 1973, 2029, 2133, 3083, 3124
AlwI GGATC 8 cut(s) 129, 223, 663, 783, 2615, 2694, 2707, 3048
AlwNI CAGNNNCTG 2 cut(s) 447, 2819
Ama87I CYCGRG 4 cut(s) 25, 461, 1610, 2403
Aor13HI TCCGGA 1 cut(s) 2122
AoxI GGCC 8 cut(s) 107, 148, 1989, 2406, 2489, 3153, 3157, 3376
ApaI GGGCCC 2 cut(s) 111, 152
ApoI RAATTY 6 cut(s) 317, 661, 991, 1816, 2076, 2233
Asp700I GAANNNNTTC 2 cut(s) 2470, 3112
AspLEI GCGC 4 cut(s) 228, 398, 471, 473
AsuC2I CCSGG 4 cut(s) 462, 463, 481, 1844
AsuHPI GGTGA 3 cut(s) 210, 1850, 1944
AsuII TTCGAA 1 cut(s) 2437
AvaI CYCGRG 4 cut(s) 25, 461, 1610, 2403
AvaII GGWCC 9 cut(s) 21, 239, 477, 545, 1224, 1700, 2514, 2672, 3082
AxyI CCTNAGG 1 cut(s) 2276
BaeGI GKGCMC 2 cut(s) 111, 152
BamHI GGATCC 1 cut(s) 2699
BanII GRGCYC 3 cut(s) 111, 152, 1912
BbrPI CACGTG 1 cut(s) 1901
BbsI GAAGAC 1 cut(s) 2820
Bbv12I GWGCWC 3 cut(s) 66, 1912, 2890
BbvCI CCTCAGC 1 cut(s) 2063
BccI CCATC 7 cut(s) 240, 842, 1358, 1427, 1948, 2339, 2688
BceAI ACGGC 2 cut(s) 366, 388
BcgI CGANNNNNNTGC 2 cut(s) 730, 764
BcnI CCSGG 4 cut(s) 462, 463, 481, 1844
BcoDI GTCTC 8 cut(s) 420, 449, 1335, 1973, 2029, 2133, 3083, 3124
BfaI CTAG 3 cut(s) 272, 2882, 3179
BfmI CTRYAG 2 cut(s) 1530, 2380
BfuAI ACCTGC 2 cut(s) 2502, 3279
BglI GCCNNNNNGGC 1 cut(s) 1265
BlpI GCTNAGC 1 cut(s) 752
Bme18I GGWCC 9 cut(s) 21, 239, 477, 545, 1224, 1700, 2514, 2672, 3082
BmeRI GACNNNNNGTC 1 cut(s) 2809
BmeT110I CYCGRG 4 cut(s) 25, 461, 1610, 2403
BmgBI CACGTC 3 cut(s) 67, 1283, 2507
BmiI GGNNCC 8 cut(s) 109, 110, 150, 241, 479, 2516, 2701, 3310
BoxI GACNNNNGTC 1 cut(s) 1619
BpiI GAAGAC 1 cut(s) 2820
BpmI CTGGAG 1 cut(s) 1751
Bpu10I CCTNAGC 1 cut(s) 2063
Bpu1102I GCTNAGC 1 cut(s) 752
Bpu14I TTCGAA 1 cut(s) 2437
BpuEI CTTGAG 5 cut(s) 647, 888, 1582, 1999, 2282
BpuMI CCSGG 4 cut(s) 462, 463, 481, 1844
BsaAI YACGTR 1 cut(s) 1901
BsaBI GATNNNNATC 1 cut(s) 1605
BsaI GGTCTC 1 cut(s) 1335
BsaWI WCCGGW 1 cut(s) 2122
BsaXI ACNNNNNCTCC 8 cut(s) 51, 68, 81, 98, 1838, 1868, 2890, 2920
Bsc4I CCNNNNNNNGG 9 cut(s) 437, 480, 495, 1611, 1876, 2151, 2635, 3166, 3374
Bse118I RCCGGY 2 cut(s) 3155, 3476
Bse1I ACTGG 1 cut(s) 15
Bse21I CCTNAGG 1 cut(s) 2276
Bse3DI GCAATG 2 cut(s) 510, 2492
Bse8I GATNNNNATC 1 cut(s) 1605
BseAI TCCGGA 1 cut(s) 2122
BseGI GGATG 9 cut(s) 260, 815, 853, 1174, 1581, 1603, 1882, 2680, 2965
BseJI GATNNNNATC 1 cut(s) 1605
BseLI CCNNNNNNNGG 9 cut(s) 437, 480, 495, 1611, 1876, 2151, 2635, 3166, 3374
BseMI GCAATG 2 cut(s) 510, 2492
BseMII CTCAG 5 cut(s) 766, 1368, 2054, 2150, 2290
BseNI ACTGG 1 cut(s) 15
BsePI GCGCGC 1 cut(s) 469
BseRI GAGGAG 3 cut(s) 2080, 2855, 3415
BseSI GKGCMC 2 cut(s) 111, 152
BseYI CCCAGC 1 cut(s) 1870
BsgI GTGCAG 6 cut(s) 195, 223, 933, 1109, 2196, 3417
Bsh1236I CGCG 2 cut(s) 398, 471
BshFI GGCC 8 cut(s) 109, 150, 1991, 2408, 2491, 3155, 3159, 3378
BsiHKAI GWGCWC 3 cut(s) 66, 1912, 2890
BsiHKCI CYCGRG 4 cut(s) 25, 461, 1610, 2403
BsiSI CCGG 6 cut(s) 462, 481, 1844, 2123, 3156, 3477
BslFI GGGAC 5 cut(s) 225, 463, 1627, 2500, 3368
BslI CCNNNNNNNGG 9 cut(s) 437, 480, 495, 1611, 1876, 2151, 2635, 3166, 3374
BsmAI GTCTC 8 cut(s) 420, 449, 1335, 1973, 2029, 2133, 3083, 3124
BsmFI GGGAC 5 cut(s) 225, 463, 1627, 2500, 3368
BsmI GAATGC 1 cut(s) 256
BsnI GGCC 8 cut(s) 109, 150, 1991, 2408, 2491, 3155, 3159, 3378
Bso31I GGTCTC 1 cut(s) 1335
BsoBI CYCGRG 4 cut(s) 25, 461, 1610, 2403
Bsp119I TTCGAA 1 cut(s) 2437
Bsp120I GGGCCC 2 cut(s) 107, 148
Bsp1286I GDGCHC 5 cut(s) 66, 111, 152, 1912, 2890
Bsp13I TCCGGA 1 cut(s) 2122
Bsp1407I TGTACA 1 cut(s) 1669
Bsp1720I GCTNAGC 1 cut(s) 752
BspACI CCGC 7 cut(s) 398, 438, 601, 1303, 3321, 3365, 3401
BspANI GGCC 8 cut(s) 109, 150, 1991, 2408, 2491, 3155, 3159, 3378
BspCNI CTCAG 5 cut(s) 765, 1367, 2055, 2151, 2289
BspEI TCCGGA 1 cut(s) 2122
BspFNI CGCG 2 cut(s) 398, 471
BspHI TCATGA 2 cut(s) 195, 3207
BspLI GGNNCC 8 cut(s) 109, 110, 150, 241, 479, 2516, 2701, 3310
BspMI ACCTGC 2 cut(s) 2502, 3279
BspPI GGATC 8 cut(s) 129, 223, 663, 783, 2615, 2694, 2707, 3048
BspQI GCTCTTC 2 cut(s) 2751, 2789
BspT104I TTCGAA 1 cut(s) 2437
BspTNI GGTCTC 1 cut(s) 1335
BsrBI CCGCTC 1 cut(s) 3321
BsrDI GCAATG 2 cut(s) 510, 2492
BsrFI RCCGGY 2 cut(s) 3155, 3476
BsrGI TGTACA 1 cut(s) 1669
BsrI ACTGG 1 cut(s) 15
BssAI RCCGGY 2 cut(s) 3155, 3476
BssHII GCGCGC 1 cut(s) 469
BssT1I CCWWGG 3 cut(s) 1151, 1515, 2703
Bst4CI ACNGT 5 cut(s) 165, 1753, 2023, 3023, 3164
Bst6I CTCTTC 5 cut(s) 1644, 2402, 2637, 2751, 2789
BstAPI GCANNNNNTGC 1 cut(s) 1587
BstAUI TGTACA 1 cut(s) 1669
BstBAI YACGTR 1 cut(s) 1901
BstBI TTCGAA 1 cut(s) 2437
BstDEI CTNAG 7 cut(s) 752, 868, 1354, 2063, 2159, 2253, 2276
BstF5I GGATG 9 cut(s) 260, 815, 853, 1174, 1581, 1603, 1882, 2680, 2965
BstFNI CGCG 2 cut(s) 398, 471
BstHHI GCGC 4 cut(s) 228, 398, 471, 473
BstMAI GTCTC 8 cut(s) 420, 449, 1335, 1973, 2029, 2133, 3083, 3124
BstMWI GCNNNNNNNGC 8 cut(s) 753, 956, 1256, 1265, 1511, 1587, 2666, 3184
BstNSI RCATGY 4 cut(s) 862, 1471, 1514, 2350
BstPAI GACNNNNGTC 1 cut(s) 1619
BstSFI CTRYAG 2 cut(s) 1530, 2380
BstSLI GKGCMC 2 cut(s) 111, 152
BstUI CGCG 2 cut(s) 398, 471
BstV2I GAAGAC 1 cut(s) 2820
BstX2I RGATCY 3 cut(s) 134, 2699, 3040
BstYI RGATCY 3 cut(s) 134, 2699, 3040
Bsu36I CCTNAGG 1 cut(s) 2276
BsuRI GGCC 8 cut(s) 109, 150, 1991, 2408, 2491, 3155, 3159, 3378
BtgZI GCGATG 1 cut(s) 1898
BtrI CACGTC 3 cut(s) 67, 1283, 2507
BtsCI GGATG 9 cut(s) 260, 815, 853, 1174, 1581, 1603, 1882, 2680, 2965
BtsI GCAGTG 4 cut(s) 950, 1035, 1585, 3342
BtsIMutI CAGTG 9 cut(s) 950, 1035, 1088, 1585, 1758, 2600, 3028, 3160, 3342
BveI ACCTGC 2 cut(s) 2502, 3279
CaiI CAGNNNCTG 2 cut(s) 447, 2819
CciI TCATGA 2 cut(s) 195, 3207
CfoI GCGC 4 cut(s) 228, 398, 471, 473
Cfr10I RCCGGY 2 cut(s) 3155, 3476
Cfr9I CCCGGG 1 cut(s) 461
Csp6I GTAC 4 cut(s) 499, 1670, 1788, 2647
CspCI CAANNNNNGTGG 2 cut(s) 661, 696
CviQI GTAC 4 cut(s) 499, 1670, 1788, 2647
DdeI CTNAG 7 cut(s) 752, 868, 1354, 2063, 2159, 2253, 2276
DriI GACNNNNNGTC 1 cut(s) 2809
EaeI YGGCCR 2 cut(s) 3153, 3157
Eam1104I CTCTTC 5 cut(s) 1644, 2402, 2637, 2751, 2789
Eam1105I GACNNNNNGTC 1 cut(s) 2809
EarI CTCTTC 5 cut(s) 1644, 2402, 2637, 2751, 2789
Ecl136II GAGCTC 1 cut(s) 1910
Eco130I CCWWGG 3 cut(s) 1151, 1515, 2703
Eco147I AGGCCT 1 cut(s) 1991
Eco24I GRGCYC 3 cut(s) 111, 152, 1912
Eco31I GGTCTC 1 cut(s) 1335
Eco32I GATATC 1 cut(s) 2872
Eco47I GGWCC 9 cut(s) 21, 239, 477, 545, 1224, 1700, 2514, 2672, 3082
Eco53kI GAGCTC 1 cut(s) 1910
Eco57I CTGAAG 5 cut(s) 1086, 1929, 2025, 2775, 3415
Eco72I CACGTG 1 cut(s) 1901
Eco81I CCTNAGG 1 cut(s) 2276
Eco88I CYCGRG 4 cut(s) 25, 461, 1610, 2403
EcoICRI GAGCTC 1 cut(s) 1910
EcoO109I RGGNCCY 4 cut(s) 108, 148, 477, 2514
EcoRI GAATTC 1 cut(s) 991
EcoRV GATATC 1 cut(s) 2872
EcoT14I CCWWGG 3 cut(s) 1151, 1515, 2703
EcoT22I ATGCAT 1 cut(s) 765
EcoT38I GRGCYC 3 cut(s) 111, 152, 1912
ErhI CCWWGG 3 cut(s) 1151, 1515, 2703
FaqI GGGAC 5 cut(s) 225, 463, 1627, 2500, 3368
FauNDI CATATG 1 cut(s) 3454
FokI GGATG 9 cut(s) 247, 822, 860, 1181, 1568, 1610, 1869, 2667, 2972
FriOI GRGCYC 3 cut(s) 111, 152, 1912
FseI GGCCGGCC 1 cut(s) 3159
FspBI CTAG 3 cut(s) 272, 2882, 3179
GlaI GCGC 4 cut(s) 227, 397, 470, 472
GsaI CCCAGC 1 cut(s) 1874
GsuI CTGGAG 1 cut(s) 1751
HaeIII GGCC 8 cut(s) 109, 150, 1991, 2408, 2491, 3155, 3159, 3378
HapII CCGG 6 cut(s) 462, 481, 1844, 2123, 3156, 3477
HhaI GCGC 4 cut(s) 228, 398, 471, 473
Hin6I GCGC 4 cut(s) 226, 396, 469, 471
HinP1I GCGC 4 cut(s) 226, 396, 469, 471
HindIII AAGCTT 1 cut(s) 2203
HpaII CCGG 6 cut(s) 462, 481, 1844, 2123, 3156, 3477
HphI GGTGA 3 cut(s) 210, 1850, 1944
Hpy166II GTNNAC 4 cut(s) 281, 2523, 2879, 2898
Hpy8I GTNNAC 4 cut(s) 281, 2523, 2879, 2898
Hpy99I CGWCG 2 cut(s) 40, 2511
HpyCH4III ACNGT 5 cut(s) 165, 1753, 2023, 3023, 3164
HpyCH4IV ACGT 6 cut(s) 66, 172, 181, 1282, 1900, 2506
HpyF10VI GCNNNNNNNGC 8 cut(s) 753, 956, 1256, 1265, 1511, 1587, 2666, 3184
HpyF3I CTNAG 7 cut(s) 752, 868, 1354, 2063, 2159, 2253, 2276
HpySE526I ACGT 6 cut(s) 66, 172, 181, 1282, 1900, 2506
HspAI GCGC 4 cut(s) 226, 396, 469, 471
Kpn2I TCCGGA 1 cut(s) 2122
KroI GCCGGC 1 cut(s) 3155
KroNI GCCGGC 1 cut(s) 3157
LguI GCTCTTC 2 cut(s) 2751, 2789
LmnI GCTCC 7 cut(s) 89, 721, 1907, 2885, 2911, 2968, 3318
MaeI CTAG 3 cut(s) 272, 2882, 3179
MaeII ACGT 6 cut(s) 66, 172, 181, 1282, 1900, 2506
MaeIII GTNAC 4 cut(s) 638, 1489, 2652, 2736
MbiI CCGCTC 1 cut(s) 3321
MfeI CAATTG 4 cut(s) 1770, 2367, 2787, 2891
MflI RGATCY 3 cut(s) 134, 2699, 3040
MhlI GDGCHC 5 cut(s) 66, 111, 152, 1912, 2890
MlyI GAGTC 4 cut(s) 37, 133, 811, 2598
MmeI TCCRAC 3 cut(s) 1885, 2165, 3085
Mph1103I ATGCAT 1 cut(s) 765
MroI TCCGGA 1 cut(s) 2122
MroNI GCCGGC 1 cut(s) 3155
MroXI GAANNNNTTC 2 cut(s) 2470, 3112
MslI CAYNNNNRTG 2 cut(s) 69, 1446
MspA1I CMGCKG 3 cut(s) 2045, 2449, 3401
MspI CCGG 6 cut(s) 462, 481, 1844, 2123, 3156, 3477
MunI CAATTG 4 cut(s) 1770, 2367, 2787, 2891
Mva1269I GAATGC 1 cut(s) 256
MvnI CGCG 2 cut(s) 398, 471
MwoI GCNNNNNNNGC 8 cut(s) 753, 956, 1256, 1265, 1511, 1587, 2666, 3184
NaeI GCCGGC 1 cut(s) 3157
NciI CCSGG 4 cut(s) 462, 463, 481, 1844
NdeI CATATG 1 cut(s) 3454
NgoMIV GCCGGC 1 cut(s) 3155
NlaIV GGNNCC 8 cut(s) 109, 110, 150, 241, 479, 2516, 2701, 3310
NmuCI GTSAC 1 cut(s) 2736
NsiI ATGCAT 1 cut(s) 765
NspI RCATGY 4 cut(s) 862, 1471, 1514, 2350
NspV TTCGAA 1 cut(s) 2437
PaeR7I CTCGAG 1 cut(s) 25
PagI TCATGA 2 cut(s) 195, 3207
PauI GCGCGC 1 cut(s) 469
PceI AGGCCT 1 cut(s) 1991
PciI ACATGT 1 cut(s) 858
PciSI GCTCTTC 2 cut(s) 2751, 2789
PcsI WCGNNNNNNNCGW 3 cut(s) 32, 178, 2906
PctI GAATGC 1 cut(s) 256
PdiI GCCGGC 1 cut(s) 3157
PdmI GAANNNNTTC 2 cut(s) 2470, 3112
PfoI TCCNGGA 3 cut(s) 1287, 1842, 3084
PleI GAGTC 4 cut(s) 36, 132, 811, 2597
PmaCI CACGTG 1 cut(s) 1901
PmlI CACGTG 1 cut(s) 1901
PpsI GAGTC 4 cut(s) 36, 132, 811, 2597
Ppu21I YACGTR 1 cut(s) 1901
PpuMI RGGWCCY 2 cut(s) 477, 2514
PscI ACATGT 1 cut(s) 858
PshAI GACNNNNGTC 1 cut(s) 1619
Psp124BI GAGCTC 1 cut(s) 1912
Psp5II RGGWCCY 2 cut(s) 477, 2514
PspCI CACGTG 1 cut(s) 1901
PspFI CCCAGC 1 cut(s) 1870
PspN4I GGNNCC 8 cut(s) 109, 110, 150, 241, 479, 2516, 2701, 3310
PspOMI GGGCCC 2 cut(s) 107, 148
PspPPI RGGWCCY 2 cut(s) 477, 2514
PspXI VCTCGAGB 1 cut(s) 25
PstNI CAGNNNCTG 2 cut(s) 447, 2819
PsuI RGATCY 3 cut(s) 134, 2699, 3040
PteI GCGCGC 1 cut(s) 469
PvuII CAGCTG 2 cut(s) 2045, 2449
RigI GGCCGGCC 1 cut(s) 3159
RsaI GTAC 4 cut(s) 500, 1671, 1789, 2648
RsaNI GTAC 4 cut(s) 499, 1670, 1788, 2647
RseI CAYNNNNRTG 2 cut(s) 69, 1446
SacI GAGCTC 1 cut(s) 1912
SapI GCTCTTC 2 cut(s) 2751, 2789
SchI GAGTC 4 cut(s) 37, 133, 811, 2598
SduI GDGCHC 5 cut(s) 66, 111, 152, 1912, 2890
SfcI CTRYAG 2 cut(s) 1530, 2380
Sfr274I CTCGAG 1 cut(s) 25
SfuI TTCGAA 1 cut(s) 2437
SinI GGWCC 9 cut(s) 21, 239, 477, 545, 1224, 1700, 2514, 2672, 3082
SlaI CTCGAG 1 cut(s) 25
SmaI CCCGGG 1 cut(s) 463
SmiMI CAYNNNNRTG 2 cut(s) 69, 1446
SmlI CTYRAG 6 cut(s) 25, 626, 903, 1561, 2014, 2261
SmoI CTYRAG 6 cut(s) 25, 626, 903, 1561, 2014, 2261
SseBI AGGCCT 1 cut(s) 1991
SsiI CCGC 7 cut(s) 398, 438, 601, 1303, 3321, 3365, 3401
SspI AATATT 3 cut(s) 1021, 1738, 2470
SspMI CTAG 3 cut(s) 272, 2882, 3179
SstI GAGCTC 1 cut(s) 1912
StuI AGGCCT 1 cut(s) 1991
StyI CCWWGG 3 cut(s) 1151, 1515, 2703
TaaI ACNGT 5 cut(s) 165, 1753, 2023, 3023, 3164
TaiI ACGT 6 cut(s) 69, 175, 184, 1285, 1903, 2509
TaqI TCGA 8 cut(s) 26, 38, 382, 667, 1008, 1014, 1437, 2437
TaqII GACCGA 2 cut(s) 9, 3070
TatI WGTACW 2 cut(s) 1669, 2646
TauI GCSGC 1 cut(s) 441
TscAI CASTG 9 cut(s) 957, 1035, 1088, 1592, 1758, 2607, 3028, 3167, 3349
TseFI GTSAC 1 cut(s) 2736
Tsp45I GTSAC 1 cut(s) 2736
TspGWI ACGGA 4 cut(s) 228, 2613, 2621, 2915
TspMI CCCGGG 1 cut(s) 461
TspRI CASTG 9 cut(s) 957, 1035, 1088, 1592, 1758, 2607, 3028, 3167, 3349
VpaK11BI GGWCC 9 cut(s) 21, 239, 477, 545, 1224, 1700, 2514, 2672, 3082
XapI RAATTY 6 cut(s) 317, 661, 991, 1816, 2076, 2233
XceI RCATGY 4 cut(s) 862, 1471, 1514, 2350
XhoI CTCGAG 1 cut(s) 25
XmaI CCCGGG 1 cut(s) 461
XmnI GAANNNNTTC 2 cut(s) 2470, 3112
XspI CTAG 3 cut(s) 272, 2882, 3179
Zsp2I ATGCAT 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.